HEADER PROTEIN BINDING 21-FEB-24 8S4C TITLE CDAA-H04 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAC,CYCLIC-DI-AMP SYNTHASE,C-DI-AMP SYNTHASE,DIADENYLATE COMPND 5 CYCLASE CDAA; COMPND 6 EC: 2.7.7.85; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: DACA, CDAA, LMO2120; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA PHAGE ECSZW-2; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 2419741 KEYWDS COMPLEX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.NEUMANN,R.FICNER REVDAT 1 19-JUN-24 8S4C 0 JRNL AUTH P.NEUMANN,R.FICNER JRNL TITL CDAA-H04 COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.290 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 65236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6100 - 5.1200 0.99 2680 142 0.2070 0.2216 REMARK 3 2 5.1200 - 4.0600 1.00 2686 143 0.1506 0.1681 REMARK 3 3 4.0600 - 3.5500 1.00 2697 145 0.1548 0.1811 REMARK 3 4 3.5500 - 3.2200 1.00 2690 142 0.1746 0.2070 REMARK 3 5 3.2200 - 2.9900 1.00 2706 144 0.1874 0.2276 REMARK 3 6 2.9900 - 2.8200 1.00 2696 144 0.2016 0.2097 REMARK 3 7 2.8200 - 2.6800 1.00 2674 145 0.1980 0.2307 REMARK 3 8 2.6800 - 2.5600 1.00 2681 138 0.2050 0.2364 REMARK 3 9 2.5600 - 2.4600 1.00 2721 141 0.1974 0.2299 REMARK 3 10 2.4600 - 2.3800 1.00 2702 143 0.2077 0.2804 REMARK 3 11 2.3800 - 2.3000 1.00 2685 142 0.2076 0.2033 REMARK 3 12 2.3000 - 2.2400 1.00 2730 144 0.2134 0.2306 REMARK 3 13 2.2400 - 2.1800 1.00 2662 140 0.2060 0.2664 REMARK 3 14 2.1800 - 2.1200 1.00 2711 147 0.2431 0.2931 REMARK 3 15 2.1200 - 2.0800 1.00 2664 142 0.2485 0.2650 REMARK 3 16 2.0800 - 2.0300 1.00 2734 147 0.2788 0.3099 REMARK 3 17 2.0300 - 1.9900 1.00 2614 138 0.3097 0.3837 REMARK 3 18 1.9900 - 1.9500 1.00 2757 144 0.3346 0.3379 REMARK 3 19 1.9500 - 1.9200 1.00 2714 143 0.3611 0.3662 REMARK 3 20 1.9200 - 1.8900 1.00 2664 141 0.3915 0.3830 REMARK 3 21 1.8900 - 1.8600 1.00 2707 135 0.4013 0.4366 REMARK 3 22 1.8600 - 1.8300 1.00 2655 141 0.4384 0.5028 REMARK 3 23 1.8300 - 1.8000 1.00 2728 147 0.4860 0.5125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2457 REMARK 3 ANGLE : 0.698 3320 REMARK 3 CHIRALITY : 0.052 399 REMARK 3 PLANARITY : 0.008 425 REMARK 3 DIHEDRAL : 11.373 929 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0629 -1.1460 -4.2089 REMARK 3 T TENSOR REMARK 3 T11: 0.7973 T22: 0.4665 REMARK 3 T33: 0.3366 T12: -0.0596 REMARK 3 T13: -0.0234 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 3.8318 L22: 3.6111 REMARK 3 L33: 3.5017 L12: 0.4996 REMARK 3 L13: -3.6154 L23: -0.0611 REMARK 3 S TENSOR REMARK 3 S11: 0.0274 S12: -0.2793 S13: 0.4641 REMARK 3 S21: 0.5838 S22: 0.0378 S23: 0.1380 REMARK 3 S31: -0.4252 S32: -0.0950 S33: -0.2937 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8956 -2.4954 -16.9173 REMARK 3 T TENSOR REMARK 3 T11: 0.5627 T22: 0.3419 REMARK 3 T33: 0.2976 T12: -0.0485 REMARK 3 T13: 0.0079 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.2831 L22: 5.8280 REMARK 3 L33: 5.1501 L12: -0.0420 REMARK 3 L13: 0.0052 L23: -0.9766 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: -0.0273 S13: -0.0586 REMARK 3 S21: -0.1031 S22: 0.1176 S23: -0.1064 REMARK 3 S31: -0.2116 S32: -0.1997 S33: -0.1052 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9615 11.7033 -16.1976 REMARK 3 T TENSOR REMARK 3 T11: 0.7545 T22: 0.3885 REMARK 3 T33: 0.3648 T12: -0.0817 REMARK 3 T13: 0.0346 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 3.1439 L22: 6.9421 REMARK 3 L33: 1.9501 L12: 1.7144 REMARK 3 L13: -0.3311 L23: -1.3916 REMARK 3 S TENSOR REMARK 3 S11: -0.1496 S12: -0.0332 S13: 0.2337 REMARK 3 S21: -0.5233 S22: 0.1582 S23: -0.4399 REMARK 3 S31: -0.4870 S32: 0.2997 S33: -0.0169 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6046 9.1315 -3.1987 REMARK 3 T TENSOR REMARK 3 T11: 0.8251 T22: 0.4572 REMARK 3 T33: 0.4843 T12: 0.0469 REMARK 3 T13: 0.1045 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 4.9107 L22: 9.6291 REMARK 3 L33: 8.3959 L12: 6.4698 REMARK 3 L13: 5.8563 L23: 6.5634 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: -0.8048 S13: 0.3087 REMARK 3 S21: 0.2826 S22: -0.2371 S23: 0.2753 REMARK 3 S31: -0.6775 S32: -0.4994 S33: -0.0781 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -4 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8547 -24.1395 -21.6999 REMARK 3 T TENSOR REMARK 3 T11: 0.5870 T22: 0.4506 REMARK 3 T33: 0.3721 T12: -0.0466 REMARK 3 T13: -0.0209 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.8767 L22: 4.4061 REMARK 3 L33: 5.8077 L12: -0.6562 REMARK 3 L13: 1.1257 L23: -0.0175 REMARK 3 S TENSOR REMARK 3 S11: 0.1278 S12: 0.4013 S13: -0.0790 REMARK 3 S21: -0.3748 S22: 0.1316 S23: 0.2139 REMARK 3 S31: 0.0095 S32: -0.7066 S33: -0.1720 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3789 -25.5262 -11.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.5505 T22: 0.3576 REMARK 3 T33: 0.2907 T12: -0.0550 REMARK 3 T13: -0.0714 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.9636 L22: 6.5617 REMARK 3 L33: 1.7680 L12: -1.7236 REMARK 3 L13: -0.2645 L23: -0.6249 REMARK 3 S TENSOR REMARK 3 S11: -0.1714 S12: -0.2252 S13: 0.0644 REMARK 3 S21: 0.6529 S22: 0.1618 S23: -0.3807 REMARK 3 S31: 0.0753 S32: 0.1135 S33: -0.0037 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6184 -33.8276 -24.5675 REMARK 3 T TENSOR REMARK 3 T11: 0.7617 T22: 0.4068 REMARK 3 T33: 0.3771 T12: -0.1242 REMARK 3 T13: 0.0009 T23: -0.0562 REMARK 3 L TENSOR REMARK 3 L11: 5.7462 L22: 6.4055 REMARK 3 L33: 7.5608 L12: -3.5769 REMARK 3 L13: 0.2332 L23: -3.0111 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.6203 S13: -0.2237 REMARK 3 S21: -0.5561 S22: 0.1308 S23: -0.1725 REMARK 3 S31: 0.8213 S32: 0.0155 S33: -0.2306 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8S4C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65314 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.73900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.7 M NACL, 0.1M NA-HEPES PH 8.5 AND 3 REMARK 280 % DMSO, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.87000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.89500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.05500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.89500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.87000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.05500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 TYR A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 VAL A 156 REMARK 465 THR A 157 REMARK 465 ALA A 158 REMARK 465 LYS A 159 REMARK 465 LYS A 160 REMARK 465 PRO A 161 REMARK 465 SER A 162 REMARK 465 ILE A 163 REMARK 465 PHE A 164 REMARK 465 SER A 165 REMARK 465 LYS A 166 REMARK 465 TRP A 167 REMARK 465 LYS A 168 REMARK 465 GLY A 169 REMARK 465 GLY A 170 REMARK 465 LYS A 171 REMARK 465 SER A 172 REMARK 465 GLU A 173 REMARK 465 ALA B 158 REMARK 465 LYS B 159 REMARK 465 LYS B 160 REMARK 465 PRO B 161 REMARK 465 SER B 162 REMARK 465 ILE B 163 REMARK 465 PHE B 164 REMARK 465 SER B 165 REMARK 465 LYS B 166 REMARK 465 TRP B 167 REMARK 465 LYS B 168 REMARK 465 GLY B 169 REMARK 465 GLY B 170 REMARK 465 LYS B 171 REMARK 465 SER B 172 REMARK 465 GLU B 173 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 157 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 130 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 36 -132.13 -130.51 REMARK 500 ARG B 36 -118.85 -133.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 8S4C A 1 173 UNP Q8Y5E4 DACA_LISMO 101 273 DBREF 8S4C B 1 173 UNP Q8Y5E4 DACA_LISMO 101 273 SEQADV 8S4C GLY A -4 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C PRO A -3 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C LEU A -2 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C GLY A -1 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C SER A 0 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C GLY B -4 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C PRO B -3 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C LEU B -2 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C GLY B -1 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8S4C SER B 0 UNP Q8Y5E4 EXPRESSION TAG SEQRES 1 A 178 GLY PRO LEU GLY SER TYR GLY SER ARG ILE GLU ARG GLU SEQRES 2 A 178 GLN HIS HIS LEU ILE GLU SER ILE GLU LYS SER THR GLN SEQRES 3 A 178 TYR MET ALA LYS ARG ARG ILE GLY ALA LEU ILE SER VAL SEQRES 4 A 178 ALA ARG ASP THR GLY MET ASP ASP TYR ILE GLU THR GLY SEQRES 5 A 178 ILE PRO LEU ASN ALA LYS ILE SER SER GLN LEU LEU ILE SEQRES 6 A 178 ASN ILE PHE ILE PRO ASN THR PRO LEU HIS ASP GLY ALA SEQRES 7 A 178 VAL ILE ILE LYS GLY ASN GLU ILE ALA SER ALA ALA SER SEQRES 8 A 178 TYR LEU PRO LEU SER ASP SER PRO PHE LEU SER LYS GLU SEQRES 9 A 178 LEU GLY THR ARG HIS ARG ALA ALA LEU GLY ILE SER GLU SEQRES 10 A 178 VAL THR ASP SER ILE THR ILE VAL VAL SER GLU GLU THR SEQRES 11 A 178 GLY GLY ILE SER LEU THR LYS GLY GLY GLU LEU PHE ARG SEQRES 12 A 178 ASP VAL SER GLU GLU GLU LEU HIS LYS ILE LEU LEU LYS SEQRES 13 A 178 GLU LEU VAL THR VAL THR ALA LYS LYS PRO SER ILE PHE SEQRES 14 A 178 SER LYS TRP LYS GLY GLY LYS SER GLU SEQRES 1 B 178 GLY PRO LEU GLY SER TYR GLY SER ARG ILE GLU ARG GLU SEQRES 2 B 178 GLN HIS HIS LEU ILE GLU SER ILE GLU LYS SER THR GLN SEQRES 3 B 178 TYR MET ALA LYS ARG ARG ILE GLY ALA LEU ILE SER VAL SEQRES 4 B 178 ALA ARG ASP THR GLY MET ASP ASP TYR ILE GLU THR GLY SEQRES 5 B 178 ILE PRO LEU ASN ALA LYS ILE SER SER GLN LEU LEU ILE SEQRES 6 B 178 ASN ILE PHE ILE PRO ASN THR PRO LEU HIS ASP GLY ALA SEQRES 7 B 178 VAL ILE ILE LYS GLY ASN GLU ILE ALA SER ALA ALA SER SEQRES 8 B 178 TYR LEU PRO LEU SER ASP SER PRO PHE LEU SER LYS GLU SEQRES 9 B 178 LEU GLY THR ARG HIS ARG ALA ALA LEU GLY ILE SER GLU SEQRES 10 B 178 VAL THR ASP SER ILE THR ILE VAL VAL SER GLU GLU THR SEQRES 11 B 178 GLY GLY ILE SER LEU THR LYS GLY GLY GLU LEU PHE ARG SEQRES 12 B 178 ASP VAL SER GLU GLU GLU LEU HIS LYS ILE LEU LEU LYS SEQRES 13 B 178 GLU LEU VAL THR VAL THR ALA LYS LYS PRO SER ILE PHE SEQRES 14 B 178 SER LYS TRP LYS GLY GLY LYS SER GLU HET DZA B 201 11 HETNAM DZA DAMINOZIDE FORMUL 3 DZA C6 H12 N2 O3 FORMUL 4 HOH *151(H2 O) HELIX 1 AA1 ARG A 4 ARG A 27 1 24 HELIX 2 AA2 MET A 40 GLU A 45 1 6 HELIX 3 AA3 SER A 55 ILE A 64 1 10 HELIX 4 AA4 GLY A 101 THR A 114 1 14 HELIX 5 AA5 SER A 141 VAL A 154 1 14 HELIX 6 AA6 GLY B -1 ARG B 26 1 28 HELIX 7 AA7 MET B 40 GLU B 45 1 6 HELIX 8 AA8 SER B 55 PHE B 63 1 9 HELIX 9 AA9 GLY B 101 THR B 114 1 14 HELIX 10 AB1 SER B 141 VAL B 154 1 14 SHEET 1 AA1 7 ILE A 48 LYS A 53 0 SHEET 2 AA1 7 GLU A 80 SER A 86 -1 O ALA A 84 N ILE A 48 SHEET 3 AA1 7 ALA A 73 LYS A 77 -1 N ALA A 73 O SER A 86 SHEET 4 AA1 7 ALA A 30 VAL A 34 1 N SER A 33 O VAL A 74 SHEET 5 AA1 7 ILE A 117 VAL A 121 -1 O ILE A 119 N ILE A 32 SHEET 6 AA1 7 ILE A 128 LYS A 132 -1 O SER A 129 N VAL A 120 SHEET 7 AA1 7 GLU A 135 PHE A 137 -1 O PHE A 137 N LEU A 130 SHEET 1 AA2 7 ILE B 48 LYS B 53 0 SHEET 2 AA2 7 GLU B 80 SER B 86 -1 O ALA B 84 N ILE B 48 SHEET 3 AA2 7 ALA B 73 LYS B 77 -1 N ALA B 73 O SER B 86 SHEET 4 AA2 7 ALA B 30 VAL B 34 1 N SER B 33 O VAL B 74 SHEET 5 AA2 7 ILE B 117 VAL B 121 -1 O ILE B 117 N VAL B 34 SHEET 6 AA2 7 ILE B 128 LYS B 132 -1 O SER B 129 N VAL B 120 SHEET 7 AA2 7 GLU B 135 PHE B 137 -1 O PHE B 137 N LEU B 130 CRYST1 43.740 64.110 129.790 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022862 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015598 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007705 0.00000