data_8SDI # _entry.id 8SDI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.390 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SDI pdb_00008sdi 10.2210/pdb8sdi/pdb WWPDB D_1000273607 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SDI _pdbx_database_status.recvd_initial_deposition_date 2023-04-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email xcli@houstonmethodist.org _pdbx_contact_author.name_first Xianchang _pdbx_contact_author.name_last Li _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5981-2762 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lou, X.H.' 1 ? 'Ma, B.B.' 2 ? 'Zhuang, Y.' 3 ? 'Li, X.C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lou, X.H.' 1 ? primary 'Ma, B.B.' 2 ? primary 'Zhuang, Y.' 3 ? primary 'Li, X.C.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Tripartite motif-containing protein 45' _entity.formula_weight 9467.619 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'coiled coil domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGGVEALEDALAQIKSVNNALQERVEAVAADVRTFSEGYIKAIEEHRDKLLQQLDDIRIQRETALQLQKAQLEQLLADM RTGVE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGGVEALEDALAQIKSVNNALQERVEAVAADVRTFSEGYIKAIEEHRDKLLQQLDDIRIQRETALQLQKAQLEQLLADM RTGVE ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 GLY n 1 5 VAL n 1 6 GLU n 1 7 ALA n 1 8 LEU n 1 9 GLU n 1 10 ASP n 1 11 ALA n 1 12 LEU n 1 13 ALA n 1 14 GLN n 1 15 ILE n 1 16 LYS n 1 17 SER n 1 18 VAL n 1 19 ASN n 1 20 ASN n 1 21 ALA n 1 22 LEU n 1 23 GLN n 1 24 GLU n 1 25 ARG n 1 26 VAL n 1 27 GLU n 1 28 ALA n 1 29 VAL n 1 30 ALA n 1 31 ALA n 1 32 ASP n 1 33 VAL n 1 34 ARG n 1 35 THR n 1 36 PHE n 1 37 SER n 1 38 GLU n 1 39 GLY n 1 40 TYR n 1 41 ILE n 1 42 LYS n 1 43 ALA n 1 44 ILE n 1 45 GLU n 1 46 GLU n 1 47 HIS n 1 48 ARG n 1 49 ASP n 1 50 LYS n 1 51 LEU n 1 52 LEU n 1 53 GLN n 1 54 GLN n 1 55 LEU n 1 56 ASP n 1 57 ASP n 1 58 ILE n 1 59 ARG n 1 60 ILE n 1 61 GLN n 1 62 ARG n 1 63 GLU n 1 64 THR n 1 65 ALA n 1 66 LEU n 1 67 GLN n 1 68 LEU n 1 69 GLN n 1 70 LYS n 1 71 ALA n 1 72 GLN n 1 73 LEU n 1 74 GLU n 1 75 GLN n 1 76 LEU n 1 77 LEU n 1 78 ALA n 1 79 ASP n 1 80 MET n 1 81 ARG n 1 82 THR n 1 83 GLY n 1 84 VAL n 1 85 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 85 _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Trim45 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 245 ? ? ? A . n A 1 2 PRO 2 246 ? ? ? A . n A 1 3 GLY 3 247 ? ? ? A . n A 1 4 GLY 4 248 248 GLY GLY A . n A 1 5 VAL 5 249 249 VAL VAL A . n A 1 6 GLU 6 250 250 GLU GLU A . n A 1 7 ALA 7 251 251 ALA ALA A . n A 1 8 LEU 8 252 252 LEU LEU A . n A 1 9 GLU 9 253 253 GLU GLU A . n A 1 10 ASP 10 254 254 ASP ASP A . n A 1 11 ALA 11 255 255 ALA ALA A . n A 1 12 LEU 12 256 256 LEU LEU A . n A 1 13 ALA 13 257 257 ALA ALA A . n A 1 14 GLN 14 258 258 GLN GLN A . n A 1 15 ILE 15 259 259 ILE ILE A . n A 1 16 LYS 16 260 260 LYS LYS A . n A 1 17 SER 17 261 261 SER SER A . n A 1 18 VAL 18 262 262 VAL VAL A . n A 1 19 ASN 19 263 263 ASN ASN A . n A 1 20 ASN 20 264 264 ASN ASN A . n A 1 21 ALA 21 265 265 ALA ALA A . n A 1 22 LEU 22 266 266 LEU LEU A . n A 1 23 GLN 23 267 267 GLN GLN A . n A 1 24 GLU 24 268 268 GLU GLU A . n A 1 25 ARG 25 269 269 ARG ARG A . n A 1 26 VAL 26 270 270 VAL VAL A . n A 1 27 GLU 27 271 271 GLU GLU A . n A 1 28 ALA 28 272 272 ALA ALA A . n A 1 29 VAL 29 273 273 VAL VAL A . n A 1 30 ALA 30 274 274 ALA ALA A . n A 1 31 ALA 31 275 275 ALA ALA A . n A 1 32 ASP 32 276 276 ASP ASP A . n A 1 33 VAL 33 277 277 VAL VAL A . n A 1 34 ARG 34 278 278 ARG ARG A . n A 1 35 THR 35 279 279 THR THR A . n A 1 36 PHE 36 280 280 PHE PHE A . n A 1 37 SER 37 281 281 SER SER A . n A 1 38 GLU 38 282 282 GLU GLU A . n A 1 39 GLY 39 283 283 GLY GLY A . n A 1 40 TYR 40 284 284 TYR TYR A . n A 1 41 ILE 41 285 285 ILE ILE A . n A 1 42 LYS 42 286 286 LYS LYS A . n A 1 43 ALA 43 287 287 ALA ALA A . n A 1 44 ILE 44 288 288 ILE ILE A . n A 1 45 GLU 45 289 289 GLU GLU A . n A 1 46 GLU 46 290 290 GLU GLU A . n A 1 47 HIS 47 291 291 HIS HIS A . n A 1 48 ARG 48 292 292 ARG ARG A . n A 1 49 ASP 49 293 293 ASP ASP A . n A 1 50 LYS 50 294 294 LYS LYS A . n A 1 51 LEU 51 295 295 LEU LEU A . n A 1 52 LEU 52 296 296 LEU LEU A . n A 1 53 GLN 53 297 297 GLN GLN A . n A 1 54 GLN 54 298 298 GLN GLN A . n A 1 55 LEU 55 299 299 LEU LEU A . n A 1 56 ASP 56 300 300 ASP ASP A . n A 1 57 ASP 57 301 301 ASP ASP A . n A 1 58 ILE 58 302 302 ILE ILE A . n A 1 59 ARG 59 303 303 ARG ARG A . n A 1 60 ILE 60 304 304 ILE ILE A . n A 1 61 GLN 61 305 305 GLN GLN A . n A 1 62 ARG 62 306 306 ARG ARG A . n A 1 63 GLU 63 307 307 GLU GLU A . n A 1 64 THR 64 308 308 THR THR A . n A 1 65 ALA 65 309 309 ALA ALA A . n A 1 66 LEU 66 310 310 LEU LEU A . n A 1 67 GLN 67 311 311 GLN GLN A . n A 1 68 LEU 68 312 312 LEU LEU A . n A 1 69 GLN 69 313 313 GLN GLN A . n A 1 70 LYS 70 314 314 LYS LYS A . n A 1 71 ALA 71 315 315 ALA ALA A . n A 1 72 GLN 72 316 316 GLN GLN A . n A 1 73 LEU 73 317 317 LEU LEU A . n A 1 74 GLU 74 318 318 GLU GLU A . n A 1 75 GLN 75 319 319 GLN GLN A . n A 1 76 LEU 76 320 320 LEU LEU A . n A 1 77 LEU 77 321 321 LEU LEU A . n A 1 78 ALA 78 322 322 ALA ALA A . n A 1 79 ASP 79 323 323 ASP ASP A . n A 1 80 MET 80 324 324 MET MET A . n A 1 81 ARG 81 325 325 ARG ARG A . n A 1 82 THR 82 326 326 THR THR A . n A 1 83 GLY 83 327 327 GLY GLY A . n A 1 84 VAL 84 328 ? ? ? A . n A 1 85 GLU 85 329 ? ? ? A . n B 1 1 GLY 1 245 ? ? ? B . n B 1 2 PRO 2 246 ? ? ? B . n B 1 3 GLY 3 247 ? ? ? B . n B 1 4 GLY 4 248 248 GLY GLY B . n B 1 5 VAL 5 249 249 VAL VAL B . n B 1 6 GLU 6 250 250 GLU GLU B . n B 1 7 ALA 7 251 251 ALA ALA B . n B 1 8 LEU 8 252 252 LEU LEU B . n B 1 9 GLU 9 253 253 GLU GLU B . n B 1 10 ASP 10 254 254 ASP ASP B . n B 1 11 ALA 11 255 255 ALA ALA B . n B 1 12 LEU 12 256 256 LEU LEU B . n B 1 13 ALA 13 257 257 ALA ALA B . n B 1 14 GLN 14 258 258 GLN GLN B . n B 1 15 ILE 15 259 259 ILE ILE B . n B 1 16 LYS 16 260 260 LYS LYS B . n B 1 17 SER 17 261 261 SER SER B . n B 1 18 VAL 18 262 262 VAL VAL B . n B 1 19 ASN 19 263 263 ASN ASN B . n B 1 20 ASN 20 264 264 ASN ASN B . n B 1 21 ALA 21 265 265 ALA ALA B . n B 1 22 LEU 22 266 266 LEU LEU B . n B 1 23 GLN 23 267 267 GLN GLN B . n B 1 24 GLU 24 268 268 GLU GLU B . n B 1 25 ARG 25 269 269 ARG ARG B . n B 1 26 VAL 26 270 270 VAL VAL B . n B 1 27 GLU 27 271 271 GLU GLU B . n B 1 28 ALA 28 272 272 ALA ALA B . n B 1 29 VAL 29 273 273 VAL VAL B . n B 1 30 ALA 30 274 274 ALA ALA B . n B 1 31 ALA 31 275 275 ALA ALA B . n B 1 32 ASP 32 276 276 ASP ASP B . n B 1 33 VAL 33 277 277 VAL VAL B . n B 1 34 ARG 34 278 278 ARG ARG B . n B 1 35 THR 35 279 279 THR THR B . n B 1 36 PHE 36 280 280 PHE PHE B . n B 1 37 SER 37 281 281 SER SER B . n B 1 38 GLU 38 282 282 GLU GLU B . n B 1 39 GLY 39 283 283 GLY GLY B . n B 1 40 TYR 40 284 284 TYR TYR B . n B 1 41 ILE 41 285 285 ILE ILE B . n B 1 42 LYS 42 286 286 LYS LYS B . n B 1 43 ALA 43 287 287 ALA ALA B . n B 1 44 ILE 44 288 288 ILE ILE B . n B 1 45 GLU 45 289 289 GLU GLU B . n B 1 46 GLU 46 290 290 GLU GLU B . n B 1 47 HIS 47 291 291 HIS HIS B . n B 1 48 ARG 48 292 292 ARG ARG B . n B 1 49 ASP 49 293 293 ASP ASP B . n B 1 50 LYS 50 294 294 LYS LYS B . n B 1 51 LEU 51 295 295 LEU LEU B . n B 1 52 LEU 52 296 296 LEU LEU B . n B 1 53 GLN 53 297 297 GLN GLN B . n B 1 54 GLN 54 298 298 GLN GLN B . n B 1 55 LEU 55 299 299 LEU LEU B . n B 1 56 ASP 56 300 300 ASP ASP B . n B 1 57 ASP 57 301 301 ASP ASP B . n B 1 58 ILE 58 302 302 ILE ILE B . n B 1 59 ARG 59 303 303 ARG ARG B . n B 1 60 ILE 60 304 304 ILE ILE B . n B 1 61 GLN 61 305 305 GLN GLN B . n B 1 62 ARG 62 306 306 ARG ARG B . n B 1 63 GLU 63 307 307 GLU GLU B . n B 1 64 THR 64 308 308 THR THR B . n B 1 65 ALA 65 309 309 ALA ALA B . n B 1 66 LEU 66 310 310 LEU LEU B . n B 1 67 GLN 67 311 311 GLN GLN B . n B 1 68 LEU 68 312 312 LEU LEU B . n B 1 69 GLN 69 313 313 GLN GLN B . n B 1 70 LYS 70 314 314 LYS LYS B . n B 1 71 ALA 71 315 315 ALA ALA B . n B 1 72 GLN 72 316 316 GLN GLN B . n B 1 73 LEU 73 317 317 LEU LEU B . n B 1 74 GLU 74 318 318 GLU GLU B . n B 1 75 GLN 75 319 319 GLN GLN B . n B 1 76 LEU 76 320 320 LEU LEU B . n B 1 77 LEU 77 321 321 LEU LEU B . n B 1 78 ALA 78 322 322 ALA ALA B . n B 1 79 ASP 79 323 323 ASP ASP B . n B 1 80 MET 80 324 324 MET MET B . n B 1 81 ARG 81 325 325 ARG ARG B . n B 1 82 THR 82 326 326 THR THR B . n B 1 83 GLY 83 327 327 GLY GLY B . n B 1 84 VAL 84 328 ? ? ? B . n B 1 85 GLU 85 329 ? ? ? B . n C 1 1 GLY 1 245 ? ? ? C . n C 1 2 PRO 2 246 ? ? ? C . n C 1 3 GLY 3 247 ? ? ? C . n C 1 4 GLY 4 248 248 GLY GLY C . n C 1 5 VAL 5 249 249 VAL VAL C . n C 1 6 GLU 6 250 250 GLU GLU C . n C 1 7 ALA 7 251 251 ALA ALA C . n C 1 8 LEU 8 252 252 LEU LEU C . n C 1 9 GLU 9 253 253 GLU GLU C . n C 1 10 ASP 10 254 254 ASP ASP C . n C 1 11 ALA 11 255 255 ALA ALA C . n C 1 12 LEU 12 256 256 LEU LEU C . n C 1 13 ALA 13 257 257 ALA ALA C . n C 1 14 GLN 14 258 258 GLN GLN C . n C 1 15 ILE 15 259 259 ILE ILE C . n C 1 16 LYS 16 260 260 LYS LYS C . n C 1 17 SER 17 261 261 SER SER C . n C 1 18 VAL 18 262 262 VAL VAL C . n C 1 19 ASN 19 263 263 ASN ASN C . n C 1 20 ASN 20 264 264 ASN ASN C . n C 1 21 ALA 21 265 265 ALA ALA C . n C 1 22 LEU 22 266 266 LEU LEU C . n C 1 23 GLN 23 267 267 GLN GLN C . n C 1 24 GLU 24 268 268 GLU GLU C . n C 1 25 ARG 25 269 269 ARG ARG C . n C 1 26 VAL 26 270 270 VAL VAL C . n C 1 27 GLU 27 271 271 GLU GLU C . n C 1 28 ALA 28 272 272 ALA ALA C . n C 1 29 VAL 29 273 273 VAL VAL C . n C 1 30 ALA 30 274 274 ALA ALA C . n C 1 31 ALA 31 275 275 ALA ALA C . n C 1 32 ASP 32 276 276 ASP ASP C . n C 1 33 VAL 33 277 277 VAL VAL C . n C 1 34 ARG 34 278 278 ARG ARG C . n C 1 35 THR 35 279 279 THR THR C . n C 1 36 PHE 36 280 280 PHE PHE C . n C 1 37 SER 37 281 281 SER SER C . n C 1 38 GLU 38 282 282 GLU GLU C . n C 1 39 GLY 39 283 283 GLY GLY C . n C 1 40 TYR 40 284 284 TYR TYR C . n C 1 41 ILE 41 285 285 ILE ILE C . n C 1 42 LYS 42 286 286 LYS LYS C . n C 1 43 ALA 43 287 287 ALA ALA C . n C 1 44 ILE 44 288 288 ILE ILE C . n C 1 45 GLU 45 289 289 GLU GLU C . n C 1 46 GLU 46 290 290 GLU GLU C . n C 1 47 HIS 47 291 291 HIS HIS C . n C 1 48 ARG 48 292 292 ARG ARG C . n C 1 49 ASP 49 293 293 ASP ASP C . n C 1 50 LYS 50 294 294 LYS LYS C . n C 1 51 LEU 51 295 295 LEU LEU C . n C 1 52 LEU 52 296 296 LEU LEU C . n C 1 53 GLN 53 297 297 GLN GLN C . n C 1 54 GLN 54 298 298 GLN GLN C . n C 1 55 LEU 55 299 299 LEU LEU C . n C 1 56 ASP 56 300 300 ASP ASP C . n C 1 57 ASP 57 301 301 ASP ASP C . n C 1 58 ILE 58 302 302 ILE ILE C . n C 1 59 ARG 59 303 303 ARG ARG C . n C 1 60 ILE 60 304 304 ILE ILE C . n C 1 61 GLN 61 305 305 GLN GLN C . n C 1 62 ARG 62 306 306 ARG ARG C . n C 1 63 GLU 63 307 307 GLU GLU C . n C 1 64 THR 64 308 308 THR THR C . n C 1 65 ALA 65 309 309 ALA ALA C . n C 1 66 LEU 66 310 310 LEU LEU C . n C 1 67 GLN 67 311 311 GLN GLN C . n C 1 68 LEU 68 312 312 LEU LEU C . n C 1 69 GLN 69 313 313 GLN GLN C . n C 1 70 LYS 70 314 314 LYS LYS C . n C 1 71 ALA 71 315 315 ALA ALA C . n C 1 72 GLN 72 316 316 GLN GLN C . n C 1 73 LEU 73 317 317 LEU LEU C . n C 1 74 GLU 74 318 318 GLU GLU C . n C 1 75 GLN 75 319 319 GLN GLN C . n C 1 76 LEU 76 320 320 LEU LEU C . n C 1 77 LEU 77 321 321 LEU LEU C . n C 1 78 ALA 78 322 322 ALA ALA C . n C 1 79 ASP 79 323 323 ASP ASP C . n C 1 80 MET 80 324 324 MET MET C . n C 1 81 ARG 81 325 325 ARG ARG C . n C 1 82 THR 82 326 326 THR THR C . n C 1 83 GLY 83 327 327 GLY GLY C . n C 1 84 VAL 84 328 ? ? ? C . n C 1 85 GLU 85 329 ? ? ? C . n D 1 1 GLY 1 245 ? ? ? D . n D 1 2 PRO 2 246 ? ? ? D . n D 1 3 GLY 3 247 ? ? ? D . n D 1 4 GLY 4 248 248 GLY GLY D . n D 1 5 VAL 5 249 249 VAL VAL D . n D 1 6 GLU 6 250 250 GLU GLU D . n D 1 7 ALA 7 251 251 ALA ALA D . n D 1 8 LEU 8 252 252 LEU LEU D . n D 1 9 GLU 9 253 253 GLU GLU D . n D 1 10 ASP 10 254 254 ASP ASP D . n D 1 11 ALA 11 255 255 ALA ALA D . n D 1 12 LEU 12 256 256 LEU LEU D . n D 1 13 ALA 13 257 257 ALA ALA D . n D 1 14 GLN 14 258 258 GLN GLN D . n D 1 15 ILE 15 259 259 ILE ILE D . n D 1 16 LYS 16 260 260 LYS LYS D . n D 1 17 SER 17 261 261 SER SER D . n D 1 18 VAL 18 262 262 VAL VAL D . n D 1 19 ASN 19 263 263 ASN ASN D . n D 1 20 ASN 20 264 264 ASN ASN D . n D 1 21 ALA 21 265 265 ALA ALA D . n D 1 22 LEU 22 266 266 LEU LEU D . n D 1 23 GLN 23 267 267 GLN GLN D . n D 1 24 GLU 24 268 268 GLU GLU D . n D 1 25 ARG 25 269 269 ARG ARG D . n D 1 26 VAL 26 270 270 VAL VAL D . n D 1 27 GLU 27 271 271 GLU GLU D . n D 1 28 ALA 28 272 272 ALA ALA D . n D 1 29 VAL 29 273 273 VAL VAL D . n D 1 30 ALA 30 274 274 ALA ALA D . n D 1 31 ALA 31 275 275 ALA ALA D . n D 1 32 ASP 32 276 276 ASP ASP D . n D 1 33 VAL 33 277 277 VAL VAL D . n D 1 34 ARG 34 278 278 ARG ARG D . n D 1 35 THR 35 279 279 THR THR D . n D 1 36 PHE 36 280 280 PHE PHE D . n D 1 37 SER 37 281 281 SER SER D . n D 1 38 GLU 38 282 282 GLU GLU D . n D 1 39 GLY 39 283 283 GLY GLY D . n D 1 40 TYR 40 284 284 TYR TYR D . n D 1 41 ILE 41 285 285 ILE ILE D . n D 1 42 LYS 42 286 286 LYS LYS D . n D 1 43 ALA 43 287 287 ALA ALA D . n D 1 44 ILE 44 288 288 ILE ILE D . n D 1 45 GLU 45 289 289 GLU GLU D . n D 1 46 GLU 46 290 290 GLU GLU D . n D 1 47 HIS 47 291 291 HIS HIS D . n D 1 48 ARG 48 292 292 ARG ARG D . n D 1 49 ASP 49 293 293 ASP ASP D . n D 1 50 LYS 50 294 294 LYS LYS D . n D 1 51 LEU 51 295 295 LEU LEU D . n D 1 52 LEU 52 296 296 LEU LEU D . n D 1 53 GLN 53 297 297 GLN GLN D . n D 1 54 GLN 54 298 298 GLN GLN D . n D 1 55 LEU 55 299 299 LEU LEU D . n D 1 56 ASP 56 300 300 ASP ASP D . n D 1 57 ASP 57 301 301 ASP ASP D . n D 1 58 ILE 58 302 302 ILE ILE D . n D 1 59 ARG 59 303 303 ARG ARG D . n D 1 60 ILE 60 304 304 ILE ILE D . n D 1 61 GLN 61 305 305 GLN GLN D . n D 1 62 ARG 62 306 306 ARG ARG D . n D 1 63 GLU 63 307 307 GLU GLU D . n D 1 64 THR 64 308 308 THR THR D . n D 1 65 ALA 65 309 309 ALA ALA D . n D 1 66 LEU 66 310 310 LEU LEU D . n D 1 67 GLN 67 311 311 GLN GLN D . n D 1 68 LEU 68 312 312 LEU LEU D . n D 1 69 GLN 69 313 313 GLN GLN D . n D 1 70 LYS 70 314 314 LYS LYS D . n D 1 71 ALA 71 315 315 ALA ALA D . n D 1 72 GLN 72 316 316 GLN GLN D . n D 1 73 LEU 73 317 317 LEU LEU D . n D 1 74 GLU 74 318 318 GLU GLU D . n D 1 75 GLN 75 319 319 GLN GLN D . n D 1 76 LEU 76 320 320 LEU LEU D . n D 1 77 LEU 77 321 321 LEU LEU D . n D 1 78 ALA 78 322 322 ALA ALA D . n D 1 79 ASP 79 323 323 ASP ASP D . n D 1 80 MET 80 324 324 MET MET D . n D 1 81 ARG 81 325 325 ARG ARG D . n D 1 82 THR 82 326 326 THR THR D . n D 1 83 GLY 83 327 327 GLY GLY D . n D 1 84 VAL 84 328 ? ? ? D . n D 1 85 GLU 85 329 ? ? ? D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8SDI _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.850 _cell.length_a_esd ? _cell.length_b 55.850 _cell.length_b_esd ? _cell.length_c 347.219 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 32 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SDI _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SDI _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Ammonium dihydrogen phosphate, 35% (v/v) glycerol' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-02-09 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8SDI _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.70 _reflns.d_resolution_low 11.985 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14141 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.85 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.978 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.267 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 8.774 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] 8.774 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] -17.547 _refine.B_iso_max ? _refine.B_iso_mean 101.729 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.details 'Hydrogens have not been used' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SDI _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 11.985 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14134 _refine.ls_number_reflns_R_free 655 _refine.ls_number_reflns_R_work 13479 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.321 _refine.ls_percent_reflns_R_free 4.634 _refine.ls_R_factor_all 0.241 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2707 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2393 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.582 _refine.pdbx_overall_ESU_R_Free 0.326 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2528 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2528 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 11.985 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.012 2557 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.645 1.632 3441 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.737 5.000 322 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.530 23.533 167 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 22.276 15.000 510 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 21.720 15.000 24 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.139 0.200 343 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 1908 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.284 0.200 1256 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.317 0.200 1776 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.121 0.200 109 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.305 0.200 40 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.198 0.200 2 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 8.839 9.501 1282 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 12.707 14.234 1597 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 12.482 10.617 1275 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 18.056 15.410 1840 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 19.825 182.653 10648 ? r_lrange_it ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.700 2.767 . . 31 1007 99.0458 . . . . 0.395 . . . . . . . . . . . 0.556 'X-RAY DIFFRACTION' 2.767 2.838 . . 33 929 97.8637 . . . . 0.409 . . . . . . . . . . . 0.438 'X-RAY DIFFRACTION' 2.838 2.916 . . 33 884 93.3809 . . . . 0.387 . . . . . . . . . . . 0.465 'X-RAY DIFFRACTION' 2.916 3.000 . . 36 873 98.9119 . . . . 0.363 . . . . . . . . . . . 0.445 'X-RAY DIFFRACTION' 3.000 3.092 . . 42 889 100.0000 . . . . 0.321 . . . . . . . . . . . 0.336 'X-RAY DIFFRACTION' 3.092 3.193 . . 44 821 99.7693 . . . . 0.315 . . . . . . . . . . . 0.454 'X-RAY DIFFRACTION' 3.193 3.304 . . 43 839 99.8867 . . . . 0.316 . . . . . . . . . . . 0.281 'X-RAY DIFFRACTION' 3.304 3.428 . . 44 751 99.7491 . . . . 0.289 . . . . . . . . . . . 0.337 'X-RAY DIFFRACTION' 3.428 3.568 . . 45 764 99.2638 . . . . 0.278 . . . . . . . . . . . 0.421 'X-RAY DIFFRACTION' 3.568 3.725 . . 40 717 99.2136 . . . . 0.229 . . . . . . . . . . . 0.270 'X-RAY DIFFRACTION' 3.725 3.906 . . 47 672 99.1724 . . . . 0.212 . . . . . . . . . . . 0.196 'X-RAY DIFFRACTION' 3.906 4.116 . . 40 644 97.8541 . . . . 0.194 . . . . . . . . . . . 0.260 'X-RAY DIFFRACTION' 4.116 4.363 . . 25 601 95.2816 . . . . 0.228 . . . . . . . . . . . 0.209 'X-RAY DIFFRACTION' 4.363 4.662 . . 21 609 99.6835 . . . . 0.198 . . . . . . . . . . . 0.323 'X-RAY DIFFRACTION' 4.662 5.032 . . 25 540 99.8233 . . . . 0.150 . . . . . . . . . . . 0.166 'X-RAY DIFFRACTION' 5.032 5.506 . . 33 497 99.6241 . . . . 0.212 . . . . . . . . . . . 0.270 'X-RAY DIFFRACTION' 5.506 6.146 . . 24 454 99.7912 . . . . 0.329 . . . . . . . . . . . 0.401 'X-RAY DIFFRACTION' 6.146 7.077 . . 29 393 98.1395 . . . . 0.295 . . . . . . . . . . . 0.238 'X-RAY DIFFRACTION' 7.077 8.621 . . 14 319 94.3343 . . . . 0.179 . . . . . . . . . . . 0.193 'X-RAY DIFFRACTION' 8.621 11.98 . . 6 276 98.6014 . . . . 0.133 . . . . . . . . . . . 0.085 # _struct.entry_id 8SDI _struct.title 'Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SDI _struct_keywords.text 'E3 ubiquitin ligase, Ubiquitination, coiled-coil, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRI45_MOUSE _struct_ref.pdbx_db_accession Q6PFY8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VEALEDALAQIKSVNNALQERVEAVAADVRTFSEGYIKAIEEHRDKLLQQLDDIRIQRETALQLQKAQLEQLLADMRTGV E ; _struct_ref.pdbx_align_begin 249 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SDI A 5 ? 85 ? Q6PFY8 249 ? 329 ? 249 329 2 1 8SDI B 5 ? 85 ? Q6PFY8 249 ? 329 ? 249 329 3 1 8SDI C 5 ? 85 ? Q6PFY8 249 ? 329 ? 249 329 4 1 8SDI D 5 ? 85 ? Q6PFY8 249 ? 329 ? 249 329 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8SDI GLY A 1 ? UNP Q6PFY8 ? ? 'expression tag' 245 1 1 8SDI PRO A 2 ? UNP Q6PFY8 ? ? 'expression tag' 246 2 1 8SDI GLY A 3 ? UNP Q6PFY8 ? ? 'expression tag' 247 3 1 8SDI GLY A 4 ? UNP Q6PFY8 ? ? 'expression tag' 248 4 2 8SDI GLY B 1 ? UNP Q6PFY8 ? ? 'expression tag' 245 5 2 8SDI PRO B 2 ? UNP Q6PFY8 ? ? 'expression tag' 246 6 2 8SDI GLY B 3 ? UNP Q6PFY8 ? ? 'expression tag' 247 7 2 8SDI GLY B 4 ? UNP Q6PFY8 ? ? 'expression tag' 248 8 3 8SDI GLY C 1 ? UNP Q6PFY8 ? ? 'expression tag' 245 9 3 8SDI PRO C 2 ? UNP Q6PFY8 ? ? 'expression tag' 246 10 3 8SDI GLY C 3 ? UNP Q6PFY8 ? ? 'expression tag' 247 11 3 8SDI GLY C 4 ? UNP Q6PFY8 ? ? 'expression tag' 248 12 4 8SDI GLY D 1 ? UNP Q6PFY8 ? ? 'expression tag' 245 13 4 8SDI PRO D 2 ? UNP Q6PFY8 ? ? 'expression tag' 246 14 4 8SDI GLY D 3 ? UNP Q6PFY8 ? ? 'expression tag' 247 15 4 8SDI GLY D 4 ? UNP Q6PFY8 ? ? 'expression tag' 248 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13480 ? 1 MORE -124 ? 1 'SSA (A^2)' 17290 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details 'Tetramer was determined by SEC-MALS.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 5 ? THR A 82 ? VAL A 249 THR A 326 1 ? 78 HELX_P HELX_P2 AA2 VAL B 5 ? THR B 82 ? VAL B 249 THR B 326 1 ? 78 HELX_P HELX_P3 AA3 VAL C 5 ? ARG C 81 ? VAL C 249 ARG C 325 1 ? 77 HELX_P HELX_P4 AA4 VAL D 5 ? THR D 82 ? VAL D 249 THR D 326 1 ? 78 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 314 ? ? -39.63 -37.21 2 1 THR A 326 ? ? -110.20 -132.79 3 1 THR B 326 ? ? -140.12 -88.99 4 1 THR C 326 ? ? -141.81 -92.17 5 1 ARG D 325 ? ? -48.16 -19.62 6 1 THR D 326 ? ? -115.16 -123.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 245 ? A GLY 1 2 1 Y 1 A PRO 246 ? A PRO 2 3 1 Y 1 A GLY 247 ? A GLY 3 4 1 Y 1 A VAL 328 ? A VAL 84 5 1 Y 1 A GLU 329 ? A GLU 85 6 1 Y 1 B GLY 245 ? B GLY 1 7 1 Y 1 B PRO 246 ? B PRO 2 8 1 Y 1 B GLY 247 ? B GLY 3 9 1 Y 1 B VAL 328 ? B VAL 84 10 1 Y 1 B GLU 329 ? B GLU 85 11 1 Y 1 C GLY 245 ? C GLY 1 12 1 Y 1 C PRO 246 ? C PRO 2 13 1 Y 1 C GLY 247 ? C GLY 3 14 1 Y 1 C VAL 328 ? C VAL 84 15 1 Y 1 C GLU 329 ? C GLU 85 16 1 Y 1 D GLY 245 ? D GLY 1 17 1 Y 1 D PRO 246 ? D PRO 2 18 1 Y 1 D GLY 247 ? D GLY 3 19 1 Y 1 D VAL 328 ? D VAL 84 20 1 Y 1 D GLU 329 ? D GLU 85 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'R01 AI080779' 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'R01 AI155488' 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8SDE _pdbx_initial_refinement_model.details 'Helix with alanines from TRIM29' # _atom_sites.entry_id 8SDI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017905 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017905 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002880 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 # loop_