data_8SJU # _entry.id 8SJU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SJU pdb_00008sju 10.2210/pdb8sju/pdb WWPDB D_1000273737 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-04-24 2 'Structure model' 1 1 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SJU _pdbx_database_status.recvd_initial_deposition_date 2023-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Janowski, J.' 1 0000-0002-6990-5719 'Vecchioni, S.' 2 0000-0001-8243-650X 'Sha, R.' 3 0000-0002-0807-734X 'Ohayon, Y.P.' 4 0000-0001-7500-4282 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 121 _citation.language ? _citation.page_first e2321992121 _citation.page_last e2321992121 _citation.title 'Engineering tertiary chirality in helical biopolymers.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2321992121 _citation.pdbx_database_id_PubMed 38684000 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Janowski, J.' 1 ? primary 'Pham, V.A.B.' 2 0000-0001-5074-7303 primary 'Vecchioni, S.' 3 0000-0001-8243-650X primary 'Woloszyn, K.' 4 ? primary 'Lu, B.' 5 0000-0001-6424-2197 primary 'Zou, Y.' 6 ? primary 'Erkalo, B.' 7 ? primary 'Perren, L.' 8 0000-0001-9169-1780 primary 'Rueb, J.' 9 ? primary 'Madnick, J.' 10 0000-0003-1026-8409 primary 'Mao, C.' 11 0000-0001-7516-8666 primary 'Saito, M.' 12 0000-0003-0795-8548 primary 'Ohayon, Y.P.' 13 0000-0001-7500-4282 primary 'Jonoska, N.' 14 ? primary 'Sha, R.' 15 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*AP*AP*AP*AP*CP*AP*CP*TP*GP*CP*CP*TP*GP*AP*AP*TP*AP*CP*CP*GP*CP*A)-3') ; 7340.785 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*CP*GP*GP*TP*AP*TP*TP*CP*AP*CP*CP*AP*CP*GP*AP*T)-3') ; 5187.374 1 ? ? ? ? 3 polymer syn 'DNA (25-MER)' 7716.963 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*TP*CP*GP*TP*GP*GP*AP*CP*TP*GP*AP*CP*TP*CP*AP*AP*AP*A)-3') ; 5524.605 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DA)(DA)(DA)(DA)(DA)(DC)(DA)(DC)(DT)(DG)(DC)(DC)(DT)(DG)(DA)(DA)(DT)(DA)(DC) (DC)(DG)(DC)(DA) ; GAAAAACACTGCCTGAATACCGCA A ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DG)(DT)(DA)(DT)(DT)(DC)(DA)(DC)(DC)(DA)(DC)(DG)(DA)(DT)' GCGGTATTCACCACGAT B ? 3 polydeoxyribonucleotide no no ;(DT)(DC)(DT)(DT)(DT)(DT)(DG)(DA)(DG)(DT)(DC)(DA)(DG)(DT)(DG)(DG)(DC)(DA)(DG)(DT) (DG)(DT)(DT)(DT)(DT) ; TCTTTTGAGTCAGTGGCAGTGTTTT C ? 4 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DT)(DG)(DG)(DA)(DC)(DT)(DG)(DA)(DC)(DT)(DC)(DA)(DA)(DA)(DA)' TCGTGGACTGACTCAAAA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DA n 1 4 DA n 1 5 DA n 1 6 DA n 1 7 DC n 1 8 DA n 1 9 DC n 1 10 DT n 1 11 DG n 1 12 DC n 1 13 DC n 1 14 DT n 1 15 DG n 1 16 DA n 1 17 DA n 1 18 DT n 1 19 DA n 1 20 DC n 1 21 DC n 1 22 DG n 1 23 DC n 1 24 DA n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DG n 2 5 DT n 2 6 DA n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 DA n 2 11 DC n 2 12 DC n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DA n 2 17 DT n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DT n 3 5 DT n 3 6 DT n 3 7 DG n 3 8 DA n 3 9 DG n 3 10 DT n 3 11 DC n 3 12 DA n 3 13 DG n 3 14 DT n 3 15 DG n 3 16 DG n 3 17 DC n 3 18 DA n 3 19 DG n 3 20 DT n 3 21 DG n 3 22 DT n 3 23 DT n 3 24 DT n 3 25 DT n 4 1 DT n 4 2 DC n 4 3 DG n 4 4 DT n 4 5 DG n 4 6 DG n 4 7 DA n 4 8 DC n 4 9 DT n 4 10 DG n 4 11 DA n 4 12 DC n 4 13 DT n 4 14 DC n 4 15 DA n 4 16 DA n 4 17 DA n 4 18 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 24 'synthetic construct' ? 32630 ? 2 1 sample 1 17 'synthetic construct' ? 32630 ? 3 1 sample 1 25 'synthetic construct' ? 32630 ? 4 1 sample 1 18 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 101 101 DG DG A . n A 1 2 DA 2 102 102 DA DA A . n A 1 3 DA 3 103 103 DA DA A . n A 1 4 DA 4 104 104 DA DA A . n A 1 5 DA 5 105 105 DA DA A . n A 1 6 DA 6 106 106 DA DA A . n A 1 7 DC 7 107 107 DC DC A . n A 1 8 DA 8 108 108 DA DA A . n A 1 9 DC 9 109 109 DC DC A . n A 1 10 DT 10 110 110 DT DT A . n A 1 11 DG 11 111 111 DG DG A . n A 1 12 DC 12 112 112 DC DC A . n A 1 13 DC 13 113 113 DC DC A . n A 1 14 DT 14 114 114 DT DT A . n A 1 15 DG 15 115 115 DG DG A . n A 1 16 DA 16 116 116 DA DA A . n A 1 17 DA 17 117 117 DA DA A . n A 1 18 DT 18 118 118 DT DT A . n A 1 19 DA 19 119 119 DA DA A . n A 1 20 DC 20 120 120 DC DC A . n A 1 21 DC 21 121 121 DC DC A . n A 1 22 DG 22 122 122 DG DG A . n A 1 23 DC 23 123 123 DC DC A . n A 1 24 DA 24 124 124 DA DA A . n B 2 1 DG 1 101 101 DG DG B . n B 2 2 DC 2 102 102 DC DC B . n B 2 3 DG 3 103 103 DG DG B . n B 2 4 DG 4 104 104 DG DG B . n B 2 5 DT 5 105 105 DT DT B . n B 2 6 DA 6 106 106 DA DA B . n B 2 7 DT 7 107 107 DT DT B . n B 2 8 DT 8 108 108 DT DT B . n B 2 9 DC 9 109 109 DC DC B . n B 2 10 DA 10 110 110 DA DA B . n B 2 11 DC 11 111 111 DC DC B . n B 2 12 DC 12 112 112 DC DC B . n B 2 13 DA 13 113 113 DA DA B . n B 2 14 DC 14 114 114 DC DC B . n B 2 15 DG 15 115 115 DG DG B . n B 2 16 DA 16 116 116 DA DA B . n B 2 17 DT 17 117 117 DT DT B . n C 3 1 DT 1 101 101 DT DT C . n C 3 2 DC 2 102 102 DC DC C . n C 3 3 DT 3 103 103 DT DT C . n C 3 4 DT 4 104 104 DT DT C . n C 3 5 DT 5 105 105 DT DT C . n C 3 6 DT 6 106 106 DT DT C . n C 3 7 DG 7 107 107 DG DG C . n C 3 8 DA 8 108 108 DA DA C . n C 3 9 DG 9 109 109 DG DG C . n C 3 10 DT 10 110 110 DT DT C . n C 3 11 DC 11 111 111 DC DC C . n C 3 12 DA 12 112 112 DA DA C . n C 3 13 DG 13 113 113 DG DG C . n C 3 14 DT 14 114 114 DT DT C . n C 3 15 DG 15 115 115 DG DG C . n C 3 16 DG 16 116 116 DG DG C . n C 3 17 DC 17 117 117 DC DC C . n C 3 18 DA 18 118 118 DA DA C . n C 3 19 DG 19 119 119 DG DG C . n C 3 20 DT 20 120 120 DT DT C . n C 3 21 DG 21 121 121 DG DG C . n C 3 22 DT 22 122 122 DT DT C . n C 3 23 DT 23 123 123 DT DT C . n C 3 24 DT 24 124 124 DT DT C . n C 3 25 DT 25 125 125 DT DT C . n D 4 1 DT 1 101 101 DT DT D . n D 4 2 DC 2 102 102 DC DC D . n D 4 3 DG 3 103 103 DG DG D . n D 4 4 DT 4 104 104 DT DT D . n D 4 5 DG 5 105 105 DG DG D . n D 4 6 DG 6 106 106 DG DG D . n D 4 7 DA 7 107 107 DA DA D . n D 4 8 DC 8 108 108 DC DC D . n D 4 9 DT 9 109 109 DT DT D . n D 4 10 DG 10 110 110 DG DG D . n D 4 11 DA 11 111 111 DA DA D . n D 4 12 DC 12 112 112 DC DC D . n D 4 13 DT 13 113 113 DT DT D . n D 4 14 DC 14 114 114 DC DC D . n D 4 15 DA 15 115 115 DA DA D . n D 4 16 DA 16 116 116 DA DA D . n D 4 17 DA 17 117 117 DA DA D . n D 4 18 DA 18 118 118 DA DA D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8SJU _cell.details ? _cell.formula_units_Z ? _cell.length_a 224.532 _cell.length_a_esd ? _cell.length_b 224.532 _cell.length_b_esd ? _cell.length_c 126.522 _cell.length_c_esd ? _cell.volume 5523993.638 _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'H 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SJU _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 23.82 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 94.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338K-293K at 0.4K/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-10-24 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00743 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00743 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 407.84 _reflns.entry_id 8SJU _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 6.988 _reflns.d_resolution_low 77.092 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2501 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 84.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 6.988 7.690 ? ? ? ? ? ? 189 ? ? ? ? ? ? ? ? ? ? ? 11.1 ? ? ? ? ? ? 1 1 0.276 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 18.847 77.092 ? 20.0 ? ? ? ? 190 ? ? ? ? ? ? ? ? ? ? ? 10.5 ? ? ? ? ? ? 2 1 0.995 ? ? 98.4 ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 912.78 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SJU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 7.14 _refine.ls_d_res_low 37.17 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 2403 _refine.ls_number_reflns_R_free 117 _refine.ls_number_reflns_R_work 2286 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 68.15 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1126 _refine.ls_R_factor_R_free 0.1774 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1106 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5W6W' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.2202 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 7.14 _refine_hist.d_res_low 37.17 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1716 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1716 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0040 ? 1922 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6086 ? 2958 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0288 ? 334 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0040 ? 84 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 35.6523 ? 826 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 7.14 _refine_ls_shell.d_res_low 37.17 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 117 _refine_ls_shell.number_reflns_R_work 2286 _refine_ls_shell.percent_reflns_obs 68.15 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1106 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.1774 # _struct.entry_id 8SJU _struct.title '[4T17] Self-assembling right-handed four-turn tensegrity triangle with 17 interjunction base pairs and R3 symmetry' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SJU _struct_keywords.text 'Tensegrity triangle, DNA nanotechnology, nanomaterials, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8SJU 8SJU ? 1 ? 1 2 PDB 8SJU 8SJU ? 2 ? 1 3 PDB 8SJU 8SJU ? 3 ? 1 4 PDB 8SJU 8SJU ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SJU A 1 ? 24 ? 8SJU 101 ? 124 ? 101 124 2 2 8SJU B 1 ? 17 ? 8SJU 101 ? 117 ? 101 117 3 3 8SJU C 1 ? 25 ? 8SJU 101 ? 125 ? 101 125 4 4 8SJU D 1 ? 18 ? 8SJU 101 ? 118 ? 101 118 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 3 N1 ? ? ? 1_555 C DT 25 N3 ? ? A DA 103 C DT 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 3 N6 ? ? ? 1_555 C DT 25 O4 ? ? A DA 103 C DT 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 24 N3 ? ? A DA 104 C DT 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 24 O4 ? ? A DA 104 C DT 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 5 N1 ? ? ? 1_555 C DT 23 N3 ? ? A DA 105 C DT 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 5 N6 ? ? ? 1_555 C DT 23 O4 ? ? A DA 105 C DT 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 6 N1 ? ? ? 1_555 C DT 22 N3 ? ? A DA 106 C DT 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 6 N6 ? ? ? 1_555 C DT 22 O4 ? ? A DA 106 C DT 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 7 N3 ? ? ? 1_555 C DG 21 N2 ? ? A DC 107 C DG 121 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog10 hydrog ? ? A DA 8 N1 ? ? ? 1_555 C DG 21 N2 ? ? A DA 108 C DG 121 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog11 hydrog ? ? A DC 9 N3 ? ? ? 1_555 C DG 19 N1 ? ? A DC 109 C DG 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 9 N4 ? ? ? 1_555 C DG 19 O6 ? ? A DC 109 C DG 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 9 O2 ? ? ? 1_555 C DG 19 N2 ? ? A DC 109 C DG 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 10 N3 ? ? ? 1_555 C DA 18 N1 ? ? A DT 110 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 10 O4 ? ? ? 1_555 C DA 18 N6 ? ? A DT 110 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 11 N1 ? ? ? 1_555 C DC 17 N3 ? ? A DG 111 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 11 N2 ? ? ? 1_555 C DC 17 O2 ? ? A DG 111 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 11 O6 ? ? ? 1_555 C DC 17 N4 ? ? A DG 111 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 12 N3 ? ? ? 1_555 C DG 16 N1 ? ? A DC 112 C DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 12 N4 ? ? ? 1_555 C DG 16 O6 ? ? A DC 112 C DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 12 O2 ? ? ? 1_555 C DG 16 N2 ? ? A DC 112 C DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 13 N3 ? ? ? 1_555 C DG 15 N1 ? ? A DC 113 C DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 13 N4 ? ? ? 1_555 C DG 15 O6 ? ? A DC 113 C DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 13 O2 ? ? ? 1_555 C DG 15 N2 ? ? A DC 113 C DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 114 B DA 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 114 B DA 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 115 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 115 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 115 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 116 B DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 116 B DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 117 B DT 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 117 B DT 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 118 B DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 118 B DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 119 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 119 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 20 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 120 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 20 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 120 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 20 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 120 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 21 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 121 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 21 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 121 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 21 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 121 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 22 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 122 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 22 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 122 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 22 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 122 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DC 11 N3 ? ? ? 1_555 D DG 6 N1 ? ? B DC 111 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DC 11 N4 ? ? ? 1_555 D DG 6 O6 ? ? B DC 111 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DC 11 O2 ? ? ? 1_555 D DG 6 N2 ? ? B DC 111 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DC 12 N3 ? ? ? 1_555 D DG 5 N1 ? ? B DC 112 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DC 12 N4 ? ? ? 1_555 D DG 5 O6 ? ? B DC 112 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DC 12 O2 ? ? ? 1_555 D DG 5 N2 ? ? B DC 112 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DA 13 N1 ? ? ? 1_555 D DT 4 N3 ? ? B DA 113 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DA 13 N6 ? ? ? 1_555 D DT 4 O4 ? ? B DA 113 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DG 15 N1 ? ? ? 1_555 D DC 2 N3 ? ? B DG 115 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DG 15 N2 ? ? ? 1_555 D DC 2 O2 ? ? B DG 115 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DG 15 O6 ? ? ? 1_555 D DC 2 N4 ? ? B DG 115 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DA 16 N1 ? ? ? 1_555 D DT 1 N3 ? ? B DA 116 D DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DA 16 N6 ? ? ? 1_555 D DT 1 O4 ? ? B DA 116 D DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 18 N1 ? ? C DT 103 D DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 18 N6 ? ? C DT 103 D DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 104 D DA 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 104 D DA 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 16 N1 ? ? C DT 105 D DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 16 N6 ? ? C DT 105 D DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 106 D DA 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 106 D DA 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 14 N3 ? ? C DG 107 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 14 O2 ? ? C DG 107 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 14 N4 ? ? C DG 107 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 109 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 109 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 109 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 11 N1 ? ? C DT 110 D DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 11 N6 ? ? C DT 110 D DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 111 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 111 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 111 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 113 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 113 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 113 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 114 D DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 114 D DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 108 ? ? "C1'" A DA 108 ? ? N9 A DA 108 ? ? 110.57 108.30 2.27 0.30 N 2 1 "O4'" A DC 120 ? ? "C1'" A DC 120 ? ? N1 A DC 120 ? ? 110.53 108.30 2.23 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -20.8079061184 -35.4910238879 22.3117447972 13.8717346135 ? 0.333118733748 ? -4.66455775342 ? 6.0080953372 ? 3.48871683596 ? 9.40439025002 ? 7.0642268023 ? 0.655400625757 ? -5.82987639196 ? 1.05971135235 ? -2.19476778606 ? 3.29687745784 ? 2.40789421707 ? -1.50395326402 ? -0.347322697048 ? 5.24747815988 ? 1.44863863366 ? 1.22438996423 ? 5.51205865223 ? -1.51041363475 ? 11.5123257047 ? 2 'X-RAY DIFFRACTION' ? refined -13.7913075583 -33.8618252894 -0.293095748026 11.8418218776 ? -2.61588942316 ? -7.90465801131 ? 9.53473105088 ? -1.06840420277 ? 10.3827290859 ? 8.63999294688 ? 0.772805349029 ? -3.38026883326 ? 0.671726246276 ? -0.565564034117 ? 1.49740721548 ? -3.48175431575 ? -1.14839246151 ? -2.23855521942 ? 2.88875435968 ? 2.50203767617 ? -2.51564863948 ? -1.85775513228 ? 4.7178939236 ? -4.38562824968 ? 3 'X-RAY DIFFRACTION' ? refined -8.94469906986 -18.7206351466 9.40478350518 11.6142932846 ? -1.88193496257 ? 1.18089488182 ? 8.46600849028 ? 0.445301885903 ? 10.5208306432 ? 2.01461619335 ? 0.531517215729 ? -2.29198958234 ? -0.579444253514 ? -0.0491233198224 ? 2.14923427834 ? -0.833162818201 ? 4.17438818417 ? -2.29210550718 ? 8.20774559131 ? 0.307556843696 ? 7.54300509095 ? -1.25122886173 ? 1.03857243498 ? -0.579331843537 ? 4 'X-RAY DIFFRACTION' ? refined -23.286425023 -45.641356568 12.1827830926 8.18775329736 ? -2.47687750444 ? -0.154808859806 ? 11.1527313648 ? -0.871029051822 ? 9.70536802339 ? -1.30812999756 ? 0.20841815872 ? 2.61984702136 ? 1.71334930667 ? -3.55849356745 ? 4.2926743348 ? -6.26451726669 ? 5.71749263378 ? -7.42766910914 ? 1.30492521823 ? 2.48032522535 ? 2.74234419648 ? -1.75868527495 ? -3.29011431363 ? -1.41816244682 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 D ? D 101 ? D ? D 118 ? ? ;(chain 'D' and resid 101 through 118) ; 2 'X-RAY DIFFRACTION' 2 A ? A 101 ? A ? A 124 ? ? ;(chain 'A' and resid 101 through 124) ; 3 'X-RAY DIFFRACTION' 3 B ? B 101 ? B ? B 117 ? ? ;(chain 'B' and resid 101 through 117) ; 4 'X-RAY DIFFRACTION' 4 C ? C 101 ? C ? C 125 ? ? ;(chain 'C' and resid 101 through 125) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8SJU 'double helix' 8SJU 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 3 1_555 C DT 25 1_555 0.149 -0.095 0.261 -1.508 -22.457 -3.644 1 A_DA103:DT125_C A 103 ? C 125 ? 20 1 1 A DA 4 1_555 C DT 24 1_555 0.108 -0.137 -0.974 -16.956 -17.629 1.861 2 A_DA104:DT124_C A 104 ? C 124 ? 20 1 1 A DA 5 1_555 C DT 23 1_555 0.212 -0.482 -1.843 -21.161 -10.134 9.237 3 A_DA105:DT123_C A 105 ? C 123 ? 20 1 1 A DA 6 1_555 C DT 22 1_555 0.287 -0.579 -1.988 -20.679 -2.407 2.884 4 A_DA106:DT122_C A 106 ? C 122 ? 20 1 1 A DC 7 1_555 C DG 21 1_555 -2.607 1.569 -1.043 -13.004 2.170 16.767 5 A_DC107:DG121_C A 107 ? C 121 ? ? ? 1 A DC 9 1_555 C DG 19 1_555 0.158 -0.119 -0.077 -1.238 -4.841 -0.136 6 A_DC109:DG119_C A 109 ? C 119 ? 19 1 1 A DT 10 1_555 C DA 18 1_555 -0.065 -0.100 0.085 -0.461 5.072 -1.985 7 A_DT110:DA118_C A 110 ? C 118 ? 20 1 1 A DG 11 1_555 C DC 17 1_555 -0.141 -0.236 0.818 4.802 1.347 -0.556 8 A_DG111:DC117_C A 111 ? C 117 ? 19 1 1 A DC 12 1_555 C DG 16 1_555 0.208 -0.158 0.457 4.217 -1.126 0.735 9 A_DC112:DG116_C A 112 ? C 116 ? 19 1 1 A DC 13 1_555 C DG 15 1_555 0.207 -0.227 0.666 0.172 3.876 2.690 10 A_DC113:DG115_C A 113 ? C 115 ? 19 1 1 A DT 14 1_555 B DA 10 1_555 -0.318 -0.254 0.980 -2.298 -13.960 -8.929 11 A_DT114:DA110_B A 114 ? B 110 ? 20 1 1 A DG 15 1_555 B DC 9 1_555 -0.211 -0.134 0.003 -4.647 -6.594 -0.436 12 A_DG115:DC109_B A 115 ? B 109 ? 19 1 1 A DA 16 1_555 B DT 8 1_555 0.106 -0.110 -0.057 -1.882 -4.111 3.364 13 A_DA116:DT108_B A 116 ? B 108 ? 20 1 1 A DA 17 1_555 B DT 7 1_555 0.110 -0.267 -1.010 -2.581 -1.575 -0.637 14 A_DA117:DT107_B A 117 ? B 107 ? 20 1 1 A DT 18 1_555 B DA 6 1_555 -0.137 -0.153 -0.543 -0.913 -0.112 0.028 15 A_DT118:DA106_B A 118 ? B 106 ? 20 1 1 A DA 19 1_555 B DT 5 1_555 0.084 -0.112 -0.117 -4.168 3.593 -0.075 16 A_DA119:DT105_B A 119 ? B 105 ? 20 1 1 A DC 20 1_555 B DG 4 1_555 0.218 -0.110 0.073 1.466 3.293 2.149 17 A_DC120:DG104_B A 120 ? B 104 ? 19 1 1 A DC 21 1_555 B DG 3 1_555 0.187 -0.113 -0.091 9.040 4.067 -0.619 18 A_DC121:DG103_B A 121 ? B 103 ? 19 1 1 A DG 22 1_555 B DC 2 1_555 -0.118 -0.097 0.116 13.386 -9.937 0.767 19 A_DG122:DC102_B A 122 ? B 102 ? 19 1 1 C DT 3 1_555 D DA 18 1_555 -0.139 0.017 -0.295 1.396 -10.749 -3.990 20 C_DT103:DA118_D C 103 ? D 118 ? 20 1 1 C DT 4 1_555 D DA 17 1_555 -0.199 -0.101 -0.070 -1.708 -13.260 -1.687 21 C_DT104:DA117_D C 104 ? D 117 ? 20 1 1 C DT 5 1_555 D DA 16 1_555 -0.169 -0.186 -0.448 -6.334 -10.097 -1.185 22 C_DT105:DA116_D C 105 ? D 116 ? 20 1 1 C DT 6 1_555 D DA 15 1_555 -0.119 -0.175 -0.139 -3.638 -2.150 3.492 23 C_DT106:DA115_D C 106 ? D 115 ? 20 1 1 C DG 7 1_555 D DC 14 1_555 -0.180 -0.228 -0.735 -1.316 4.678 -1.446 24 C_DG107:DC114_D C 107 ? D 114 ? 19 1 1 C DG 9 1_555 D DC 12 1_555 -0.160 -0.162 0.410 4.655 -11.729 -1.287 25 C_DG109:DC112_D C 109 ? D 112 ? 19 1 1 C DT 10 1_555 D DA 11 1_555 -0.189 -0.037 0.183 -3.347 -13.211 -5.694 26 C_DT110:DA111_D C 110 ? D 111 ? 20 1 1 C DC 11 1_555 D DG 10 1_555 0.160 -0.245 0.928 -1.946 -3.626 0.163 27 C_DC111:DG110_D C 111 ? D 110 ? 19 1 1 C DG 13 1_555 D DC 8 1_555 -0.212 -0.128 0.108 -0.109 -12.171 1.103 28 C_DG113:DC108_D C 113 ? D 108 ? 19 1 1 C DT 14 1_555 D DA 7 1_555 -0.102 -0.168 -0.545 -4.527 -9.544 -1.221 29 C_DT114:DA107_D C 114 ? D 107 ? 20 1 1 B DC 11 1_555 D DG 6 1_555 0.139 -0.327 -1.083 -2.498 -3.489 0.125 30 B_DC111:DG106_D B 111 ? D 106 ? 19 1 1 B DC 12 1_555 D DG 5 1_555 0.189 -0.154 -0.316 2.900 -4.801 0.726 31 B_DC112:DG105_D B 112 ? D 105 ? 19 1 1 B DA 13 1_555 D DT 4 1_555 0.121 -0.473 -1.314 9.996 -5.542 -0.787 32 B_DA113:DT104_D B 113 ? D 104 ? 20 1 1 B DG 15 1_555 D DC 2 1_555 -0.237 -0.139 -0.256 -6.238 -10.957 1.012 33 B_DG115:DC102_D B 115 ? D 102 ? 19 1 1 B DA 16 1_555 D DT 1 1_555 0.007 -0.171 -0.671 -9.502 -7.450 3.323 34 B_DA116:DT101_D B 116 ? D 101 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 3 1_555 C DT 25 1_555 A DA 4 1_555 C DT 24 1_555 -1.476 0.164 3.584 0.129 -3.482 34.622 0.853 2.489 3.546 -5.833 -0.216 34.791 1 AA_DA103DA104:DT124DT125_CC A 103 ? C 125 ? A 104 ? C 124 ? 1 A DA 4 1_555 C DT 24 1_555 A DA 5 1_555 C DT 23 1_555 -0.267 0.639 3.669 -2.502 0.690 43.403 0.788 0.089 3.688 0.933 3.380 43.477 2 AA_DA104DA105:DT123DT124_CC A 104 ? C 124 ? A 105 ? C 123 ? 1 A DA 5 1_555 C DT 23 1_555 A DA 6 1_555 C DT 22 1_555 -1.060 1.016 3.544 -4.776 4.972 37.979 0.848 0.943 3.743 7.563 7.266 38.577 3 AA_DA105DA106:DT122DT123_CC A 105 ? C 123 ? A 106 ? C 122 ? 1 A DA 6 1_555 C DT 22 1_555 A DC 7 1_555 C DG 21 1_555 0.431 -0.807 2.874 -7.261 5.832 25.909 -2.894 -2.396 2.430 12.504 15.569 27.505 4 AA_DA106DC107:DG121DT122_CC A 106 ? C 122 ? A 107 ? C 121 ? 1 A DC 7 1_555 C DG 21 1_555 A DC 9 1_555 C DG 19 1_555 0.125 -1.126 6.187 -1.827 10.152 62.909 -1.895 -0.267 5.957 9.658 1.739 63.664 5 AA_DC107DC109:DG119DG121_CC A 107 ? C 121 ? A 109 ? C 119 ? 1 A DC 9 1_555 C DG 19 1_555 A DT 10 1_555 C DA 18 1_555 -0.413 -1.245 3.222 3.608 9.960 34.258 -3.354 1.153 2.710 16.429 -5.952 35.812 6 AA_DC109DT110:DA118DG119_CC A 109 ? C 119 ? A 110 ? C 118 ? 1 A DT 10 1_555 C DA 18 1_555 A DG 11 1_555 C DC 17 1_555 0.608 -0.846 3.079 -1.872 4.488 38.867 -1.758 -1.113 2.936 6.712 2.799 39.158 7 AA_DT110DG111:DC117DA118_CC A 110 ? C 118 ? A 111 ? C 117 ? 1 A DG 11 1_555 C DC 17 1_555 A DC 12 1_555 C DG 16 1_555 -0.071 -1.025 3.259 2.612 -0.184 35.958 -1.631 0.484 3.251 -0.297 -4.224 36.050 8 AA_DG111DC112:DG116DC117_CC A 111 ? C 117 ? A 112 ? C 116 ? 1 A DC 12 1_555 C DG 16 1_555 A DC 13 1_555 C DG 15 1_555 0.023 -0.981 3.305 -3.241 3.800 38.512 -1.937 -0.428 3.185 5.732 4.889 38.823 9 AA_DC112DC113:DG115DG116_CC A 112 ? C 116 ? A 113 ? C 115 ? 1 A DC 13 1_555 C DG 15 1_555 A DT 14 1_555 B DA 10 1_555 -3.402 -1.903 3.248 -5.639 11.041 -0.845 -5.104 -22.815 0.368 -76.693 -39.167 -12.427 10 AA_DC113DT114:DA110DG115_BC A 113 ? C 115 ? A 114 ? B 110 ? 1 A DT 14 1_555 B DA 10 1_555 A DG 15 1_555 B DC 9 1_555 0.521 -0.718 3.478 -1.838 6.173 33.669 -2.229 -1.186 3.267 10.537 3.138 34.262 11 AA_DT114DG115:DC109DA110_BB A 114 ? B 110 ? A 115 ? B 109 ? 1 A DG 15 1_555 B DC 9 1_555 A DA 16 1_555 B DT 8 1_555 0.078 0.890 3.822 -1.188 3.481 46.556 0.781 -0.216 3.873 4.396 1.501 46.693 12 AA_DG115DA116:DT108DC109_BB A 115 ? B 109 ? A 116 ? B 108 ? 1 A DA 16 1_555 B DT 8 1_555 A DA 17 1_555 B DT 7 1_555 -0.264 0.296 3.656 -3.752 2.397 42.621 0.137 -0.059 3.676 3.288 5.145 42.842 13 AA_DA116DA117:DT107DT108_BB A 116 ? B 108 ? A 117 ? B 107 ? 1 A DA 17 1_555 B DT 7 1_555 A DT 18 1_555 B DA 6 1_555 0.093 -1.298 3.293 -1.816 0.422 32.884 -2.362 -0.475 3.267 0.746 3.205 32.936 14 AA_DA117DT118:DA106DT107_BB A 117 ? B 107 ? A 118 ? B 106 ? 1 A DT 18 1_555 B DA 6 1_555 A DA 19 1_555 B DT 5 1_555 -0.341 -0.516 3.410 -2.872 3.998 36.902 -1.361 0.139 3.353 6.282 4.512 37.217 15 AA_DT118DA119:DT105DA106_BB A 118 ? B 106 ? A 119 ? B 105 ? 1 A DA 19 1_555 B DT 5 1_555 A DC 20 1_555 B DG 4 1_555 0.908 -1.072 3.237 -2.353 1.820 29.793 -2.439 -2.228 3.088 3.528 4.563 29.938 16 AA_DA119DC120:DG104DT105_BB A 119 ? B 105 ? A 120 ? B 104 ? 1 A DC 20 1_555 B DG 4 1_555 A DC 21 1_555 B DG 3 1_555 -0.533 -0.005 3.046 2.106 5.010 33.151 -0.768 1.242 2.975 8.708 -3.660 33.581 17 AA_DC120DC121:DG103DG104_BB A 120 ? B 104 ? A 121 ? B 103 ? 1 A DC 21 1_555 B DG 3 1_555 A DG 22 1_555 B DC 2 1_555 1.780 0.257 3.012 5.355 7.068 31.721 -0.722 -2.251 3.242 12.625 -9.566 32.906 18 AA_DC121DG122:DC102DG103_BB A 121 ? B 103 ? A 122 ? B 102 ? 1 C DT 3 1_555 D DA 18 1_555 C DT 4 1_555 D DA 17 1_555 -0.065 -0.431 3.260 -0.602 -0.717 32.443 -0.645 0.011 3.269 -1.284 1.077 32.456 19 CC_DT103DT104:DA117DA118_DD C 103 ? D 118 ? C 104 ? D 117 ? 1 C DT 4 1_555 D DA 17 1_555 C DT 5 1_555 D DA 16 1_555 -0.546 -0.893 3.356 0.864 0.636 38.309 -1.442 0.943 3.329 0.969 -1.317 38.324 20 CC_DT104DT105:DA116DA117_DD C 104 ? D 117 ? C 105 ? D 116 ? 1 C DT 5 1_555 D DA 16 1_555 C DT 6 1_555 D DA 15 1_555 0.980 0.229 3.257 -0.712 3.031 38.651 -0.024 -1.564 3.247 4.570 1.074 38.771 21 CC_DT105DT106:DA115DA116_DD C 105 ? D 116 ? C 106 ? D 115 ? 1 C DT 6 1_555 D DA 15 1_555 C DG 7 1_555 D DC 14 1_555 -0.265 -0.422 3.379 -2.337 4.261 30.903 -1.612 0.036 3.303 7.934 4.352 31.274 22 CC_DT106DG107:DC114DA115_DD C 106 ? D 115 ? C 107 ? D 114 ? 1 C DG 7 1_555 D DC 14 1_555 C DG 9 1_555 D DC 12 1_555 0.961 -1.765 6.399 -10.059 14.779 61.676 -2.874 -1.729 5.689 14.101 9.598 63.969 23 CC_DG107DG109:DC112DC114_DD C 107 ? D 114 ? C 109 ? D 112 ? 1 C DG 9 1_555 D DC 12 1_555 C DT 10 1_555 D DA 11 1_555 -0.622 -1.770 3.311 -1.306 -1.444 33.746 -2.805 0.853 3.403 -2.485 2.248 33.800 24 CC_DG109DT110:DA111DC112_DD C 109 ? D 112 ? C 110 ? D 111 ? 1 C DT 10 1_555 D DA 11 1_555 C DC 11 1_555 D DG 10 1_555 0.577 0.543 3.669 -1.179 -1.461 37.995 1.041 -1.052 3.628 -2.242 1.809 38.039 25 CC_DT110DC111:DG110DA111_DD C 110 ? D 111 ? C 111 ? D 110 ? 1 C DC 11 1_555 D DG 10 1_555 C DG 13 1_555 D DC 8 1_555 -2.060 -1.529 6.637 -18.369 12.512 65.360 -2.328 0.401 6.598 11.254 16.522 68.637 26 CC_DC111DG113:DC108DG110_DD C 111 ? D 110 ? C 113 ? D 108 ? 1 C DG 13 1_555 D DC 8 1_555 C DT 14 1_555 D DA 7 1_555 -0.458 -1.573 3.345 1.807 -0.721 35.306 -2.481 1.026 3.349 -1.187 -2.977 35.358 27 CC_DG113DT114:DA107DC108_DD C 113 ? D 108 ? C 114 ? D 107 ? 1 C DT 14 1_555 D DA 7 1_555 B DC 11 1_555 D DG 6 1_555 0.390 0.119 3.598 -2.691 -1.372 39.796 0.348 -0.911 3.560 -2.012 3.947 39.906 28 CB_DT114DC111:DG106DA107_DD C 114 ? D 107 ? B 111 ? D 106 ? 1 B DC 11 1_555 D DG 6 1_555 B DC 12 1_555 D DG 5 1_555 0.021 -0.215 3.434 -0.669 -1.189 34.180 -0.169 -0.146 3.438 -2.021 1.138 34.207 29 BB_DC111DC112:DG105DG106_DD B 111 ? D 106 ? B 112 ? D 105 ? 1 B DC 12 1_555 D DG 5 1_555 B DA 13 1_555 D DT 4 1_555 0.403 0.558 3.729 3.220 2.182 35.843 0.545 -0.126 3.777 3.533 -5.213 36.047 30 BB_DC112DA113:DT104DG105_DD B 112 ? D 105 ? B 113 ? D 104 ? 1 B DA 13 1_555 D DT 4 1_555 B DG 15 1_555 D DC 2 1_555 -0.437 1.322 6.372 -7.758 28.789 63.982 -0.979 -0.194 6.421 25.762 6.942 69.914 31 BB_DA113DG115:DC102DT104_DD B 113 ? D 104 ? B 115 ? D 102 ? 1 B DG 15 1_555 D DC 2 1_555 B DA 16 1_555 D DT 1 1_555 0.152 -0.210 3.395 3.329 -2.758 34.205 0.092 0.282 3.400 -4.666 -5.632 34.469 32 BB_DG115DA116:DT101DC102_DD B 115 ? D 102 ? B 116 ? D 101 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' 2106790 3 'Human Frontier Science Program (HFSP)' France RPG0010/2017 4 'National Science Foundation (NSF, United States)' 'United States' DMR-1420073 5 'National Aeronautics and Space Administration (NASA, United States)' 'United States' '2020 NASA Center Innovation Fund' 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5W6W _pdbx_initial_refinement_model.details 'tensegrity triangle' # _space_group.name_H-M_alt 'H 3' _space_group.name_Hall 'H 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 8SJU _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.004454 _atom_sites.fract_transf_matrix[1][2] 0.002571 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005143 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007904 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_