HEADER VIRAL PROTEIN 25-APR-23 8SM5 TITLE CRYSTAL STRUCTURE OF BHRF1 FROM EPSTEIN BARR VIRUS IN COMPLEX WITH BID TITLE 2 BH3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOPTOSIS REGULATOR BHRF1; COMPND 3 CHAIN: A, C, E, G, I; COMPND 4 SYNONYM: EARLY ANTIGEN PROTEIN R,EA-R,NUCLEAR ANTIGEN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BID BH3; COMPND 8 CHAIN: B, D, F, H, J; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 4 STRAIN B95-8; SOURCE 3 ORGANISM_COMMON: EPSTEIN-BARR VIRUS (STRAIN B95-8), HUMAN SOURCE 4 HERPESVIRUS 4 (STRAIN B95-8); SOURCE 5 ORGANISM_TAXID: 10377; SOURCE 6 STRAIN: B95-8; SOURCE 7 GENE: BHRF1; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BHRF1, BID PEPTIDE, COMPLEX, VIRAL PROTEIN, BH3 DOMAIN, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR S.WYATT,S.SINHA REVDAT 3 06-MAR-24 8SM5 1 COMPND SOURCE DBREF REVDAT 2 08-NOV-23 8SM5 1 JRNL REVDAT 1 11-OCT-23 8SM5 0 JRNL AUTH S.WYATT,K.GLOVER,S.DASANNA,M.LEWISON,M.GONZALEZ-GARCIA, JRNL AUTH 2 C.L.COLBERT,S.C.SINHA JRNL TITL EPSTEIN-BARR VIRUS ENCODED BCL2, BHRF1, DOWNREGULATES JRNL TITL 2 AUTOPHAGY BY NONCANONICAL BINDING OF BECN1. JRNL REF BIOCHEMISTRY V. 62 2934 2023 JRNL REFN ISSN 0006-2960 JRNL PMID 37776275 JRNL DOI 10.1021/ACS.BIOCHEM.3C00225 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.343 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 42909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.043 REMARK 3 FREE R VALUE TEST SET COUNT : 2164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 80.8941 - 6.4359 0.98 2763 141 0.1660 0.2232 REMARK 3 2 6.4359 - 5.1086 1.00 2765 147 0.2180 0.2866 REMARK 3 3 5.1086 - 4.4629 1.00 2727 148 0.1785 0.2246 REMARK 3 4 4.4629 - 4.0549 1.00 2748 136 0.1766 0.2282 REMARK 3 5 4.0549 - 3.7642 1.00 2704 134 0.1943 0.2814 REMARK 3 6 3.7642 - 3.5423 1.00 2732 147 0.1978 0.2700 REMARK 3 7 3.5423 - 3.3649 1.00 2727 134 0.2032 0.2627 REMARK 3 8 3.3649 - 3.2184 1.00 2698 139 0.2165 0.2694 REMARK 3 9 3.2184 - 3.0945 1.00 2726 132 0.2153 0.3057 REMARK 3 10 3.0945 - 2.9877 1.00 2726 150 0.2134 0.2945 REMARK 3 11 2.9877 - 2.8943 1.00 2667 158 0.2201 0.2705 REMARK 3 12 2.8943 - 2.8116 1.00 2685 147 0.2365 0.2995 REMARK 3 13 2.8116 - 2.7375 1.00 2676 164 0.2809 0.3265 REMARK 3 14 2.7375 - 2.6707 1.00 2721 146 0.2995 0.3573 REMARK 3 15 2.7000 - 2.6100 1.00 2680 141 0.3416 0.4006 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.165 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6962 REMARK 3 ANGLE : 1.193 9464 REMARK 3 CHIRALITY : 0.052 1071 REMARK 3 PLANARITY : 0.007 1214 REMARK 3 DIHEDRAL : 12.572 2494 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 90.9442 -30.0563 -9.7567 REMARK 3 T TENSOR REMARK 3 T11: 0.5971 T22: 0.4346 REMARK 3 T33: 0.3500 T12: 0.0239 REMARK 3 T13: 0.0674 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 5.0982 L22: 5.9885 REMARK 3 L33: 3.3085 L12: -0.2936 REMARK 3 L13: 1.4622 L23: 0.2395 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: 0.1240 S13: -0.5571 REMARK 3 S21: -0.0412 S22: 0.1503 S23: 0.0485 REMARK 3 S31: 0.1000 S32: -0.0516 S33: -0.1795 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 87.0268 2.0875 -20.3037 REMARK 3 T TENSOR REMARK 3 T11: 1.2249 T22: 0.5526 REMARK 3 T33: 0.2789 T12: -0.1152 REMARK 3 T13: 0.0518 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 2.8102 L22: 3.5917 REMARK 3 L33: 4.4984 L12: 0.1767 REMARK 3 L13: 0.2283 L23: -0.3179 REMARK 3 S TENSOR REMARK 3 S11: -0.3036 S12: 0.1121 S13: 0.2761 REMARK 3 S21: -0.2043 S22: 0.5325 S23: 0.3620 REMARK 3 S31: -1.0224 S32: -0.0004 S33: -0.2329 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): 60.8933 -40.7404 -18.1537 REMARK 3 T TENSOR REMARK 3 T11: 0.4472 T22: 0.5099 REMARK 3 T33: 0.6682 T12: -0.0394 REMARK 3 T13: -0.0415 T23: -0.1103 REMARK 3 L TENSOR REMARK 3 L11: 5.8862 L22: 6.8470 REMARK 3 L33: 4.1471 L12: -0.4944 REMARK 3 L13: -0.8445 L23: 2.5846 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: -0.2664 S13: 0.4564 REMARK 3 S21: -0.0679 S22: -0.3875 S23: 0.9565 REMARK 3 S31: -0.1490 S32: -0.4177 S33: 0.3780 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN H REMARK 3 ORIGIN FOR THE GROUP (A): 69.7726 -28.2490 -60.7647 REMARK 3 T TENSOR REMARK 3 T11: 1.4882 T22: 0.9234 REMARK 3 T33: 1.1465 T12: -0.1189 REMARK 3 T13: 0.0433 T23: -0.0630 REMARK 3 L TENSOR REMARK 3 L11: 8.7625 L22: 6.9693 REMARK 3 L33: 6.2055 L12: -4.2265 REMARK 3 L13: 1.0587 L23: 0.8192 REMARK 3 S TENSOR REMARK 3 S11: 0.9156 S12: 1.0734 S13: -1.8846 REMARK 3 S21: -0.0130 S22: -0.2682 S23: 0.8170 REMARK 3 S31: 0.2083 S32: 0.0551 S33: -0.3836 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'C' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'E' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'G' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'I' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'D' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'F' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'H' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN 'B' REMARK 3 SELECTION : CHAIN 'J' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SM5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000271602. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42919 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 161.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 MM NAC2H3O2 PH 5.0, 1.6 MM HCOONA, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.99067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.49533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.24300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.74767 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.73833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN C 157 REMARK 465 ASP D 98 REMARK 465 ASN G 157 REMARK 465 LEU I 88 REMARK 465 GLU I 89 REMARK 465 ILE I 90 REMARK 465 PHE I 91 REMARK 465 HIS I 92 REMARK 465 ARG I 93 REMARK 465 GLY I 94 REMARK 465 ASP I 95 REMARK 465 PRO I 96 REMARK 465 SER I 97 REMARK 465 LEU I 98 REMARK 465 GLY I 99 REMARK 465 ARG I 100 REMARK 465 ALA I 101 REMARK 465 LEU I 102 REMARK 465 ALA I 103 REMARK 465 TRP I 104 REMARK 465 ASN I 157 REMARK 465 ASP J 81 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 92 ND1 CE1 NE2 REMARK 480 ASP A 95 CG OD1 OD2 REMARK 480 GLN A 146 OE1 NE2 REMARK 480 ILE A 154 CG1 CG2 CD1 REMARK 480 GLU A 155 CB CG CD OE1 OE2 REMARK 480 ARG B 88 CB CG CD NE CZ NH1 NH2 REMARK 480 HIS C 92 ND1 CE1 NE2 REMARK 480 ARG C 93 CB CG CD NE CZ NH1 NH2 REMARK 480 ASP C 95 CG OD1 OD2 REMARK 480 LEU C 98 CD1 CD2 REMARK 480 GLN C 146 OE1 NE2 REMARK 480 ASP D 81 CB CG OD1 OD2 REMARK 480 ARG D 84 CB CG CD NE CZ NH1 NH2 REMARK 480 LEU D 90 CD1 CD2 REMARK 480 TYR E 3 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR E 3 OH REMARK 480 HIS E 92 ND1 CE1 NE2 REMARK 480 ASP E 95 CG OD1 OD2 REMARK 480 LEU E 98 CB CG CD1 CD2 REMARK 480 LEU E 102 CD1 CD2 REMARK 480 GLN E 146 OE1 NE2 REMARK 480 LEU E 153 CB CG CD1 CD2 REMARK 480 LEU G 38 CB CG CD1 CD2 REMARK 480 ARG G 39 CB CG CD NE CZ NH1 NH2 REMARK 480 LEU G 40 CD1 CD2 REMARK 480 VAL G 46 CG1 CG2 REMARK 480 ARG G 71 CB CG CD NE CZ NH1 NH2 REMARK 480 HIS G 75 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS G 78 CB CG ND1 CD2 CE1 NE2 REMARK 480 VAL G 79 CB CG1 CG2 REMARK 480 VAL G 86 CG1 CG2 REMARK 480 ILE G 90 CG1 CG2 CD1 REMARK 480 HIS G 92 ND1 CE1 NE2 REMARK 480 ASP G 95 CG OD1 OD2 REMARK 480 VAL G 126 CG1 CG2 REMARK 480 GLN G 146 OE1 NE2 REMARK 480 ILE G 154 CB CG1 CG2 CD1 REMARK 480 GLU G 155 CB CG CD OE1 OE2 REMARK 480 ASP G 156 CB CG OD1 OD2 REMARK 480 ILE H 82 CB CG1 CG2 CD1 REMARK 480 ARG H 84 CB CG CD NE CZ NH1 NH2 REMARK 480 ILE H 86 CG1 CG2 CD1 REMARK 480 TYR I 3 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR I 3 OH REMARK 480 ILE I 8 CB CG1 CG2 CD1 REMARK 480 LEU I 12 CB CG CD1 CD2 REMARK 480 ILE I 14 CG1 CG2 CD1 REMARK 480 LEU I 38 CB CG CD1 CD2 REMARK 480 TYR I 50 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR I 50 OH REMARK 480 VAL I 52 CB CG1 CG2 REMARK 480 ARG I 71 CB CG CD NE CZ NH1 NH2 REMARK 480 PHE I 72 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 ILE I 73 CB CG1 CG2 CD1 REMARK 480 HIS I 75 CB CG ND1 CD2 CE1 NE2 REMARK 480 VAL I 79 CB CG1 CG2 REMARK 480 PHE I 83 CD1 CD2 CE1 CE2 CZ REMARK 480 MET I 105 CE REMARK 480 MET I 109 CE REMARK 480 LEU I 115 CD1 CD2 REMARK 480 VAL I 126 CG1 CG2 REMARK 480 VAL I 130 CG1 CG2 REMARK 480 LEU I 134 CB CG CD1 CD2 REMARK 480 SER I 137 CB OG REMARK 480 GLN I 146 OE1 NE2 REMARK 480 LEU I 153 CB CG CD1 CD2 REMARK 480 ILE I 154 CB CG1 CG2 CD1 REMARK 480 ARG J 84 CB CG CD NE CZ NH1 NH2 REMARK 480 ILE J 86 CB CG1 CG2 CD1 REMARK 480 ARG J 88 CB CG CD NE CZ NH1 NH2 REMARK 480 LEU J 90 CB CG CD1 CD2 REMARK 480 VAL J 93 CB CG1 CG2 REMARK 480 ASP J 98 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 78 85.13 -166.25 REMARK 500 HIS C 78 82.19 -167.90 REMARK 500 ILE D 82 -53.82 -137.90 REMARK 500 HIS E 78 81.97 -168.23 REMARK 500 HIS G 78 83.07 -166.80 REMARK 500 HIS I 78 86.60 -169.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SM5 A 2 157 UNP P03182 EAR_EBVB9 2 157 DBREF 8SM5 B 81 98 PDB 8SM5 8SM5 81 98 DBREF 8SM5 C 2 157 UNP P03182 EAR_EBVB9 2 157 DBREF 8SM5 D 81 98 PDB 8SM5 8SM5 81 98 DBREF 8SM5 E 2 157 UNP P03182 EAR_EBVB9 2 157 DBREF 8SM5 F 81 98 PDB 8SM5 8SM5 81 98 DBREF 8SM5 G 2 157 UNP P03182 EAR_EBVB9 2 157 DBREF 8SM5 H 81 98 PDB 8SM5 8SM5 81 98 DBREF 8SM5 I 2 157 UNP P03182 EAR_EBVB9 2 157 DBREF 8SM5 J 81 98 PDB 8SM5 8SM5 81 98 SEQRES 1 A 156 ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS ILE SEQRES 2 A 156 ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS PRO SEQRES 3 A 156 VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG LEU SEQRES 4 A 156 SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL LEU SEQRES 5 A 156 LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE THR SEQRES 6 A 156 GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS VAL SEQRES 7 A 156 ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE HIS SEQRES 8 A 156 ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP MET SEQRES 9 A 156 ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS ASN SEQRES 10 A 156 GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL ARG SEQRES 11 A 156 GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP ILE SEQRES 12 A 156 HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP ASN SEQRES 1 B 18 ASP ILE ILE ARG ASN ILE ALA ARG HIS LEU ALA GLN VAL SEQRES 2 B 18 GLY ASP SER MET ASP SEQRES 1 C 156 ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS ILE SEQRES 2 C 156 ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS PRO SEQRES 3 C 156 VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG LEU SEQRES 4 C 156 SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL LEU SEQRES 5 C 156 LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE THR SEQRES 6 C 156 GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS VAL SEQRES 7 C 156 ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE HIS SEQRES 8 C 156 ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP MET SEQRES 9 C 156 ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS ASN SEQRES 10 C 156 GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL ARG SEQRES 11 C 156 GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP ILE SEQRES 12 C 156 HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP ASN SEQRES 1 D 18 ASP ILE ILE ARG ASN ILE ALA ARG HIS LEU ALA GLN VAL SEQRES 2 D 18 GLY ASP SER MET ASP SEQRES 1 E 156 ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS ILE SEQRES 2 E 156 ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS PRO SEQRES 3 E 156 VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG LEU SEQRES 4 E 156 SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL LEU SEQRES 5 E 156 LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE THR SEQRES 6 E 156 GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS VAL SEQRES 7 E 156 ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE HIS SEQRES 8 E 156 ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP MET SEQRES 9 E 156 ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS ASN SEQRES 10 E 156 GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL ARG SEQRES 11 E 156 GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP ILE SEQRES 12 E 156 HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP ASN SEQRES 1 F 18 ASP ILE ILE ARG ASN ILE ALA ARG HIS LEU ALA GLN VAL SEQRES 2 F 18 GLY ASP SER MET ASP SEQRES 1 G 156 ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS ILE SEQRES 2 G 156 ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS PRO SEQRES 3 G 156 VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG LEU SEQRES 4 G 156 SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL LEU SEQRES 5 G 156 LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE THR SEQRES 6 G 156 GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS VAL SEQRES 7 G 156 ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE HIS SEQRES 8 G 156 ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP MET SEQRES 9 G 156 ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS ASN SEQRES 10 G 156 GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL ARG SEQRES 11 G 156 GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP ILE SEQRES 12 G 156 HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP ASN SEQRES 1 H 18 ASP ILE ILE ARG ASN ILE ALA ARG HIS LEU ALA GLN VAL SEQRES 2 H 18 GLY ASP SER MET ASP SEQRES 1 I 156 ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS ILE SEQRES 2 I 156 ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS PRO SEQRES 3 I 156 VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG LEU SEQRES 4 I 156 SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL LEU SEQRES 5 I 156 LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE THR SEQRES 6 I 156 GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS VAL SEQRES 7 I 156 ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE HIS SEQRES 8 I 156 ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP MET SEQRES 9 I 156 ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS ASN SEQRES 10 I 156 GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL ARG SEQRES 11 I 156 GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP ILE SEQRES 12 I 156 HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP ASN SEQRES 1 J 18 ASP ILE ILE ARG ASN ILE ALA ARG HIS LEU ALA GLN VAL SEQRES 2 J 18 GLY ASP SER MET ASP FORMUL 11 HOH *37(H2 O) HELIX 1 AA1 SER A 4 VAL A 19 1 16 HELIX 2 AA2 HIS A 26 THR A 36 1 11 HELIX 3 AA3 ASP A 44 ASN A 61 1 18 HELIX 4 AA4 ASN A 61 THR A 76 1 16 HELIX 5 AA5 HIS A 78 HIS A 92 1 15 HELIX 6 AA6 SER A 97 CYS A 117 1 21 HELIX 7 AA7 PRO A 122 GLU A 138 1 17 HELIX 8 AA8 LEU A 140 GLY A 148 1 9 HELIX 9 AA9 GLY A 149 ASP A 156 1 8 HELIX 10 AB1 ILE B 82 MET B 97 1 16 HELIX 11 AB2 SER C 4 VAL C 19 1 16 HELIX 12 AB3 HIS C 26 THR C 36 1 11 HELIX 13 AB4 ASP C 44 ASN C 61 1 18 HELIX 14 AB5 ASN C 61 THR C 76 1 16 HELIX 15 AB6 HIS C 78 HIS C 92 1 15 HELIX 16 AB7 SER C 97 CYS C 117 1 21 HELIX 17 AB8 PRO C 122 GLU C 138 1 17 HELIX 18 AB9 LEU C 140 GLN C 147 1 8 HELIX 19 AC1 GLY C 149 ASP C 156 1 8 HELIX 20 AC2 ILE D 82 SER D 96 1 15 HELIX 21 AC3 SER E 4 VAL E 19 1 16 HELIX 22 AC4 HIS E 26 THR E 36 1 11 HELIX 23 AC5 ASP E 44 ASN E 61 1 18 HELIX 24 AC6 ASN E 61 THR E 76 1 16 HELIX 25 AC7 HIS E 78 HIS E 92 1 15 HELIX 26 AC8 SER E 97 CYS E 117 1 21 HELIX 27 AC9 PRO E 122 GLU E 138 1 17 HELIX 28 AD1 LEU E 140 GLN E 147 1 8 HELIX 29 AD2 GLY E 149 ASN E 157 1 9 HELIX 30 AD3 ILE F 82 SER F 96 1 15 HELIX 31 AD4 SER G 4 VAL G 19 1 16 HELIX 32 AD5 HIS G 26 THR G 36 1 11 HELIX 33 AD6 ASP G 44 ASN G 61 1 18 HELIX 34 AD7 ASN G 61 THR G 74 1 14 HELIX 35 AD8 HIS G 78 HIS G 92 1 15 HELIX 36 AD9 SER G 97 CYS G 117 1 21 HELIX 37 AE1 PRO G 122 SER G 137 1 16 HELIX 38 AE2 LEU G 140 GLN G 147 1 8 HELIX 39 AE3 GLY G 149 ASP G 156 1 8 HELIX 40 AE4 ILE H 82 SER H 96 1 15 HELIX 41 AE5 SER I 4 VAL I 19 1 16 HELIX 42 AE6 HIS I 26 THR I 36 1 11 HELIX 43 AE7 ASP I 44 ASN I 61 1 18 HELIX 44 AE8 ASN I 61 THR I 76 1 16 HELIX 45 AE9 HIS I 78 PHE I 87 1 10 HELIX 46 AF1 ALA I 106 CYS I 117 1 12 HELIX 47 AF2 PRO I 122 SER I 137 1 16 HELIX 48 AF3 LEU I 140 GLN I 147 1 8 HELIX 49 AF4 GLY I 149 ASP I 156 1 8 HELIX 50 AF5 ILE J 83 ASP J 95 1 13 CISPEP 1 THR A 36 PRO A 37 0 -11.61 CISPEP 2 THR C 36 PRO C 37 0 -11.42 CISPEP 3 THR E 36 PRO E 37 0 -11.57 CISPEP 4 THR G 36 PRO G 37 0 -11.35 CISPEP 5 THR I 36 PRO I 37 0 -12.62 CRYST1 186.817 186.817 70.486 90.00 90.00 120.00 P 65 30 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005353 0.003090 0.000000 0.00000 SCALE2 0.000000 0.006181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014187 0.00000