HEADER UNKNOWN FUNCTION 26-APR-23 8SMD TITLE STRUCTURE OF CLOSTRIDIUM BOTULINUM PROPHAGE TAD1 IN COMPLEX WITH 1''- TITLE 2 3' GCADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER ATPASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 GENE: FDB51_07880; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GCADPR, THOERIS, ANTI-PHAGE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.LU,E.YIRMIYA,A.LEAVITT,C.AVRAHAM,I.OSTERMAN,J.GARB,S.P.ANTINE, AUTHOR 2 S.E.MOONEY,S.J.HOBBS,G.AMITAI,R.SOREK,P.J.KRANZUSCH REVDAT 3 24-JAN-24 8SMD 1 JRNL REVDAT 2 13-DEC-23 8SMD 1 JRNL REVDAT 1 22-NOV-23 8SMD 0 JRNL AUTH E.YIRMIYA,A.LEAVITT,A.LU,A.E.RAGUCCI,C.AVRAHAM,I.OSTERMAN, JRNL AUTH 2 J.GARB,S.P.ANTINE,S.E.MOONEY,S.J.HOBBS,P.J.KRANZUSCH, JRNL AUTH 3 G.AMITAI,R.SOREK JRNL TITL PHAGES OVERCOME BACTERIAL IMMUNITY VIA DIVERSE ANTI-DEFENCE JRNL TITL 2 PROTEINS. JRNL REF NATURE V. 625 352 2024 JRNL REFN ESSN 1476-4687 JRNL PMID 37992756 JRNL DOI 10.1038/S41586-023-06869-W REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 17481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9200 - 3.8100 1.00 2892 151 0.1546 0.1850 REMARK 3 2 3.8100 - 3.0300 1.00 2777 150 0.2151 0.2438 REMARK 3 3 3.0200 - 2.6400 1.00 2763 145 0.2668 0.3181 REMARK 3 4 2.6400 - 2.4000 1.00 2745 144 0.3027 0.3167 REMARK 3 5 2.4000 - 2.2300 1.00 2738 147 0.2528 0.3226 REMARK 3 6 2.2300 - 2.1000 0.98 2689 140 0.3021 0.3816 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.338 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 2088 REMARK 3 ANGLE : 0.392 2812 REMARK 3 CHIRALITY : 0.036 303 REMARK 3 PLANARITY : 0.003 357 REMARK 3 DIHEDRAL : 12.530 792 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0877 -9.9988 -41.1774 REMARK 3 T TENSOR REMARK 3 T11: 0.6544 T22: 0.5642 REMARK 3 T33: 0.6621 T12: -0.0035 REMARK 3 T13: -0.1145 T23: -0.0700 REMARK 3 L TENSOR REMARK 3 L11: 0.1110 L22: 0.0887 REMARK 3 L33: 0.2461 L12: 0.0289 REMARK 3 L13: -0.0581 L23: 0.1891 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: 0.7615 S13: -0.5267 REMARK 3 S21: -0.7768 S22: 0.1199 S23: -0.3530 REMARK 3 S31: -0.2120 S32: -0.2258 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4152 1.2231 -36.6240 REMARK 3 T TENSOR REMARK 3 T11: 0.5259 T22: 0.4537 REMARK 3 T33: 0.5901 T12: 0.0033 REMARK 3 T13: -0.0869 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.6745 L22: 1.0400 REMARK 3 L33: 1.3534 L12: -0.8413 REMARK 3 L13: -0.5546 L23: 0.5838 REMARK 3 S TENSOR REMARK 3 S11: -0.1947 S12: 0.2713 S13: 0.6438 REMARK 3 S21: -0.0020 S22: -0.0548 S23: 0.2262 REMARK 3 S31: -0.1870 S32: -0.2313 S33: -0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1617 10.7751 -25.1209 REMARK 3 T TENSOR REMARK 3 T11: 0.6360 T22: 0.5054 REMARK 3 T33: 0.8473 T12: -0.0020 REMARK 3 T13: -0.2090 T23: -0.0699 REMARK 3 L TENSOR REMARK 3 L11: 0.1845 L22: -0.0273 REMARK 3 L33: 0.3334 L12: -0.0737 REMARK 3 L13: -0.2494 L23: 0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.4783 S12: -0.8180 S13: 0.4378 REMARK 3 S21: 0.2960 S22: 0.4365 S23: -0.1716 REMARK 3 S31: -0.1732 S32: 0.3252 S33: -0.0459 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8638 -9.1408 -22.0274 REMARK 3 T TENSOR REMARK 3 T11: 0.5236 T22: 0.4782 REMARK 3 T33: 0.5430 T12: 0.0504 REMARK 3 T13: -0.0729 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 0.3083 L22: 0.6608 REMARK 3 L33: 0.0639 L12: 0.2853 REMARK 3 L13: 0.5917 L23: -0.8487 REMARK 3 S TENSOR REMARK 3 S11: -0.0693 S12: -0.3909 S13: 0.1182 REMARK 3 S21: 0.2678 S22: -0.0188 S23: -0.1923 REMARK 3 S31: 0.1094 S32: 0.0967 S33: -0.0532 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0386 -4.0975 -15.3089 REMARK 3 T TENSOR REMARK 3 T11: 0.6331 T22: 0.5805 REMARK 3 T33: 0.5595 T12: 0.0521 REMARK 3 T13: -0.0431 T23: -0.1324 REMARK 3 L TENSOR REMARK 3 L11: 0.3779 L22: 0.9512 REMARK 3 L33: 0.7787 L12: -0.6871 REMARK 3 L13: 0.6695 L23: -0.7956 REMARK 3 S TENSOR REMARK 3 S11: -0.4827 S12: -0.2216 S13: 0.2438 REMARK 3 S21: 0.2206 S22: 0.3394 S23: 0.1973 REMARK 3 S31: -0.1399 S32: -0.1325 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5853 13.1966 -13.8751 REMARK 3 T TENSOR REMARK 3 T11: 1.0527 T22: 0.7853 REMARK 3 T33: 0.7680 T12: 0.0204 REMARK 3 T13: -0.0083 T23: -0.1706 REMARK 3 L TENSOR REMARK 3 L11: 6.9456 L22: 4.5149 REMARK 3 L33: 0.9671 L12: -1.5680 REMARK 3 L13: -1.0576 L23: 2.0970 REMARK 3 S TENSOR REMARK 3 S11: -0.2082 S12: -1.4333 S13: -0.3073 REMARK 3 S21: 1.3024 S22: 0.3660 S23: 0.5610 REMARK 3 S31: -0.5398 S32: -0.0391 S33: -0.0392 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3227 -3.7827 -23.6473 REMARK 3 T TENSOR REMARK 3 T11: 0.4653 T22: 0.5221 REMARK 3 T33: 0.7155 T12: 0.1015 REMARK 3 T13: -0.0391 T23: -0.0628 REMARK 3 L TENSOR REMARK 3 L11: 0.4068 L22: 1.6883 REMARK 3 L33: 1.4036 L12: 0.4958 REMARK 3 L13: -0.5660 L23: -0.7918 REMARK 3 S TENSOR REMARK 3 S11: -0.3217 S12: 0.0479 S13: 1.0090 REMARK 3 S21: -0.3373 S22: 0.0038 S23: 0.8319 REMARK 3 S31: -0.1376 S32: -0.5997 S33: 0.0539 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8848 -16.0250 -30.0438 REMARK 3 T TENSOR REMARK 3 T11: 0.7215 T22: 0.5963 REMARK 3 T33: 0.7547 T12: -0.1478 REMARK 3 T13: 0.0787 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 0.0339 L22: 0.0982 REMARK 3 L33: 0.0519 L12: -0.0640 REMARK 3 L13: 0.0048 L23: -0.0252 REMARK 3 S TENSOR REMARK 3 S11: 0.4039 S12: -1.3167 S13: 0.1450 REMARK 3 S21: 0.3311 S22: -0.1071 S23: 0.8313 REMARK 3 S31: 0.3452 S32: 0.1562 S33: -0.0010 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4846 -4.5545 -32.5483 REMARK 3 T TENSOR REMARK 3 T11: 0.4866 T22: 0.4201 REMARK 3 T33: 0.5458 T12: -0.0071 REMARK 3 T13: -0.0535 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: -0.0603 L22: 0.1561 REMARK 3 L33: 0.2885 L12: 0.0218 REMARK 3 L13: -0.2442 L23: -0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.3614 S12: 0.3105 S13: 0.2127 REMARK 3 S21: -0.1194 S22: 0.2485 S23: 0.0628 REMARK 3 S31: 0.1484 S32: 0.0861 S33: -0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0062 -18.7280 -31.7309 REMARK 3 T TENSOR REMARK 3 T11: 0.4969 T22: 0.3768 REMARK 3 T33: 0.4326 T12: 0.0476 REMARK 3 T13: -0.0331 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.7276 L22: 0.4187 REMARK 3 L33: 0.6296 L12: 0.1094 REMARK 3 L13: 0.0528 L23: -0.0951 REMARK 3 S TENSOR REMARK 3 S11: 0.0888 S12: 0.0455 S13: -0.1996 REMARK 3 S21: -0.1949 S22: -0.1100 S23: -0.0671 REMARK 3 S31: 0.3018 S32: 0.1700 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SMD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000274068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 193 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17522 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 42.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: 7UAV REMARK 200 REMARK 200 REMARK: CUBES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, TRIS-HCL PH 8.5, REMARK 280 1,6-HEXANEDIOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.98450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.98450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.98450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.98450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.98450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.98450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 47.98450 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 47.98450 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 47.98450 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 47.98450 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 47.98450 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 47.98450 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 47.98450 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 47.98450 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 47.98450 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 47.98450 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 47.98450 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 47.98450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 328 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 SER B 1 REMARK 465 MET B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 -169.21 -79.83 REMARK 500 GLN A 54 104.73 -58.89 REMARK 500 TYR B 48 79.52 -160.32 REMARK 500 GLN B 54 104.44 -59.56 REMARK 500 LYS B 62 2.84 55.51 REMARK 500 PHE B 88 42.75 -108.86 REMARK 500 THR B 124 -163.64 -119.02 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8SMD A 2 125 UNP A0A846JTD7_CLOBO DBREF2 8SMD A A0A846JTD7 1 124 DBREF1 8SMD B 2 125 UNP A0A846JTD7_CLOBO DBREF2 8SMD B A0A846JTD7 1 124 SEQADV 8SMD SER A 1 UNP A0A846JTD EXPRESSION TAG SEQADV 8SMD SER B 1 UNP A0A846JTD EXPRESSION TAG SEQRES 1 A 125 SER MET LYS GLU LEU SER THR ILE GLN LYS ARG GLU LYS SEQRES 2 A 125 LEU ASN THR VAL GLU ARG ILE GLY SER GLU GLY PRO GLY SEQRES 3 A 125 GLY ALA TYR HIS GLU TYR VAL ILE LYS SER ASN SER MET SEQRES 4 A 125 ASP SER GLN GLY ASN TYR ASP VAL TYR GLU THR ILE LYS SEQRES 5 A 125 PHE GLN LYS GLY ALA ARG LYS GLU GLU LYS SER GLN HIS SEQRES 6 A 125 GLY VAL ILE ASP SER ASP LEU LEU GLU ILE VAL ARG ASP SEQRES 7 A 125 ARG LEU LYS SER PHE GLN ALA GLY PRO PHE SER SER ARG SEQRES 8 A 125 GLU ASN ALA CYS ALA LEU THR HIS VAL GLU GLU ALA LEU SEQRES 9 A 125 MET TRP MET ASN ARG ARG VAL GLU ASP ARG ILE GLU ARG SEQRES 10 A 125 ASN VAL LEU GLY THR ASN THR LYS SEQRES 1 B 125 SER MET LYS GLU LEU SER THR ILE GLN LYS ARG GLU LYS SEQRES 2 B 125 LEU ASN THR VAL GLU ARG ILE GLY SER GLU GLY PRO GLY SEQRES 3 B 125 GLY ALA TYR HIS GLU TYR VAL ILE LYS SER ASN SER MET SEQRES 4 B 125 ASP SER GLN GLY ASN TYR ASP VAL TYR GLU THR ILE LYS SEQRES 5 B 125 PHE GLN LYS GLY ALA ARG LYS GLU GLU LYS SER GLN HIS SEQRES 6 B 125 GLY VAL ILE ASP SER ASP LEU LEU GLU ILE VAL ARG ASP SEQRES 7 B 125 ARG LEU LYS SER PHE GLN ALA GLY PRO PHE SER SER ARG SEQRES 8 B 125 GLU ASN ALA CYS ALA LEU THR HIS VAL GLU GLU ALA LEU SEQRES 9 B 125 MET TRP MET ASN ARG ARG VAL GLU ASP ARG ILE GLU ARG SEQRES 10 B 125 ASN VAL LEU GLY THR ASN THR LYS HET OJC A 201 35 HET OJC B 201 35 HETNAM OJC (2R,3R,3AS,5S,6R,7S,8R,11R,13S,15AR)-2-(6-AMINO-9H- HETNAM 2 OJC PURIN-9-YL)-3,6,7,11,13-PENTAHYDROXYOCTAHYDRO-2H,5H, HETNAM 3 OJC 11H,13H-5,8-EPOXY-11LAMBDA~5~,13LAMBDA~5~-FURO[2,3- HETNAM 4 OJC G][1,3,5,9,2,4]TETRAOXADIPHOSPHACYCLOTETRADECINE-11, HETNAM 5 OJC 13-DIONE FORMUL 3 OJC 2(C15 H21 N5 O13 P2) FORMUL 5 HOH *60(H2 O) HELIX 1 AA1 GLY A 24 ALA A 28 5 5 HELIX 2 AA2 ILE A 68 GLY A 86 1 19 HELIX 3 AA3 SER A 90 ARG A 117 1 28 HELIX 4 AA4 GLY B 24 ALA B 28 5 5 HELIX 5 AA5 ILE B 68 ALA B 85 1 18 HELIX 6 AA6 SER B 90 ARG B 117 1 28 SHEET 1 AA1 3 ASN A 15 ARG A 19 0 SHEET 2 AA1 3 GLU A 31 SER A 36 -1 O LYS A 35 N THR A 16 SHEET 3 AA1 3 TYR A 48 LYS A 52 -1 O ILE A 51 N TYR A 32 SHEET 1 AA2 3 ASN B 15 ARG B 19 0 SHEET 2 AA2 3 GLU B 31 SER B 36 -1 O LYS B 35 N THR B 16 SHEET 3 AA2 3 TYR B 48 LYS B 52 -1 O ILE B 51 N TYR B 32 CRYST1 95.969 95.969 95.969 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010420 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010420 0.00000