HEADER METAL BINDING PROTEIN 04-MAY-23 8SQR TITLE CRYSTAL STRUCTURE OF BACTERIOFERRITIN (BFR) FROM BRUCELLA ABORTUS TITLE 2 (IRON BOUND, F16L MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIOFERRITIN; COMPND 3 CHAIN: A; COMPND 4 EC: 1.16.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA ABORTUS 2308; SOURCE 3 ORGANISM_TAXID: 359391; SOURCE 4 GENE: BFR, BAB2_0675; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BRABA.00028.A.A1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 22-MAY-24 8SQR 1 REMARK REVDAT 1 17-MAY-23 8SQR 0 JRNL AUTH S.LOVELL,L.LIU,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF BACTERIOFERRITIN (BFR) FROM BRUCELLA JRNL TITL 2 ABORTUS (IRON BOUND, F16L MUTANT) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21RC1_4933: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.310 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1488 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.6300 - 3.6700 1.00 2861 148 0.1726 0.1647 REMARK 3 2 3.6700 - 2.9100 1.00 2692 128 0.1617 0.2026 REMARK 3 3 2.9100 - 2.5400 1.00 2643 140 0.1582 0.1600 REMARK 3 4 2.5400 - 2.3100 1.00 2608 134 0.1599 0.1793 REMARK 3 5 2.3100 - 2.1500 1.00 2617 129 0.1574 0.1937 REMARK 3 6 2.1500 - 2.0200 1.00 2562 135 0.1766 0.2022 REMARK 3 7 2.0200 - 1.9200 1.00 2578 144 0.1867 0.1880 REMARK 3 8 1.9200 - 1.8400 1.00 2566 141 0.1926 0.2162 REMARK 3 9 1.8300 - 1.7600 1.00 2562 124 0.2133 0.2497 REMARK 3 10 1.7600 - 1.7000 1.00 2558 145 0.2515 0.2474 REMARK 3 11 1.7000 - 1.6500 1.00 2572 120 0.2675 0.2912 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1424 REMARK 3 ANGLE : 0.902 1946 REMARK 3 CHIRALITY : 0.041 199 REMARK 3 PLANARITY : 0.008 253 REMARK 3 DIHEDRAL : 16.035 530 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5565 30.2729 6.4817 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.1777 REMARK 3 T33: 0.1463 T12: 0.0453 REMARK 3 T13: -0.0165 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 3.0961 L22: 7.7753 REMARK 3 L33: 4.3083 L12: -4.4908 REMARK 3 L13: -3.2473 L23: 5.6385 REMARK 3 S TENSOR REMARK 3 S11: -0.1505 S12: -0.0431 S13: -0.0842 REMARK 3 S21: 0.2591 S22: 0.0827 S23: 0.2035 REMARK 3 S31: 0.1170 S32: -0.0089 S33: 0.1510 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.4415 26.2711 15.2952 REMARK 3 T TENSOR REMARK 3 T11: 0.2111 T22: 0.1820 REMARK 3 T33: 0.1861 T12: -0.0062 REMARK 3 T13: 0.0228 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 2.2114 L22: 4.5116 REMARK 3 L33: 2.8206 L12: -3.0724 REMARK 3 L13: -2.1097 L23: 3.7934 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0151 S13: 0.0204 REMARK 3 S21: 0.1477 S22: 0.0072 S23: 0.0084 REMARK 3 S31: -0.0431 S32: 0.0027 S33: 0.0152 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.9803 6.7031 -2.0172 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.1846 REMARK 3 T33: 0.1273 T12: -0.0136 REMARK 3 T13: 0.0331 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.8201 L22: 6.8178 REMARK 3 L33: 2.8605 L12: -0.7416 REMARK 3 L13: 1.1146 L23: 2.5068 REMARK 3 S TENSOR REMARK 3 S11: -0.1722 S12: 0.3178 S13: 0.0906 REMARK 3 S21: -0.0756 S22: -0.0624 S23: 0.2530 REMARK 3 S31: -0.1057 S32: -0.1593 S33: 0.2566 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2697 32.9142 6.9185 REMARK 3 T TENSOR REMARK 3 T11: 0.2291 T22: 0.1960 REMARK 3 T33: 0.1927 T12: 0.0258 REMARK 3 T13: 0.0089 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.1392 L22: 8.1433 REMARK 3 L33: 5.5973 L12: -3.2626 REMARK 3 L13: -2.7239 L23: 6.7436 REMARK 3 S TENSOR REMARK 3 S11: 0.0790 S12: -0.0456 S13: 0.0715 REMARK 3 S21: -0.0477 S22: -0.0065 S23: -0.0877 REMARK 3 S31: -0.1495 S32: 0.0149 S33: -0.1075 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274299. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : ' REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30324 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 46.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 58.10 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 60.90 REMARK 200 R MERGE FOR SHELL (I) : 3.93900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% MPD, 0.4M MGCL2, 0.1M AC PH 4.6, REMARK 280 BRABA.00028.A.A1.PW39164 AT 10 MG/ML. PLATE: LIU-S-066, WELL G9, REMARK 280 2. PUCK: PSL-1801, CRYO: 35% MPD + CRYSTALLANT. 5 MINUTE SOAK IN REMARK 280 25 MM FERROUS AMMONIUM SULFATE IN CRYO, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 121760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 126680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3352.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 15 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 17 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 17 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 22 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 23 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 201 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 A 204 LIES ON A SPECIAL POSITION. REMARK 375 O1 SO4 A 204 LIES ON A SPECIAL POSITION. REMARK 375 CL CL A 205 LIES ON A SPECIAL POSITION. REMARK 375 FE HEM A 214 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 321 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 352 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 418 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 LEU A 77 REMARK 465 ALA A 160 REMARK 465 GLU A 161 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 208 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE1 REMARK 620 2 GLU A 18 OE2 57.1 REMARK 620 3 GLU A 51 OE1 77.4 134.4 REMARK 620 4 GLU A 127 OE2 140.1 83.7 141.9 REMARK 620 5 ACT A 213 OXT 92.1 78.2 109.3 71.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 211 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 46 OE2 REMARK 620 2 GLU A 50 OE2 116.3 REMARK 620 3 SO4 A 203 O2 158.0 83.1 REMARK 620 4 HOH A 310 O 74.0 162.8 90.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 210 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 50 OE1 REMARK 620 2 SO4 A 203 O4 96.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 209 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 51 OE2 REMARK 620 2 GLU A 94 OE1 142.7 REMARK 620 3 GLU A 94 OE2 87.1 56.7 REMARK 620 4 GLU A 127 OE1 149.4 62.5 118.9 REMARK 620 5 HIS A 130 ND1 101.7 92.1 96.2 91.7 REMARK 620 6 ACT A 213 O 80.6 77.1 67.5 94.3 163.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 214 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 52 SD REMARK 620 2 HEM A 214 NA 85.5 REMARK 620 3 HEM A 214 NB 91.5 87.9 REMARK 620 4 HEM A 214 NC 92.2 176.8 89.9 REMARK 620 5 HEM A 214 ND 82.9 90.9 174.3 91.1 REMARK 620 6 MET A 52 SD 0.0 85.5 91.5 92.2 82.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 106 OE1 REMARK 620 2 HOH A 326 O 91.6 REMARK 620 3 HOH A 330 O 175.5 88.0 REMARK 620 4 HOH A 331 O 96.2 94.8 79.4 REMARK 620 5 HOH A 372 O 86.1 173.0 94.8 92.0 REMARK 620 6 HOH A 393 O 94.8 86.0 89.6 168.9 87.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 325 O REMARK 620 2 HOH A 325 O 90.6 REMARK 620 3 HOH A 368 O 99.6 169.7 REMARK 620 4 HOH A 368 O 91.2 99.6 78.5 REMARK 620 N 1 2 3 DBREF 8SQR A 1 161 UNP Q2YKI4 Q2YKI4_BRUA2 1 161 SEQADV 8SQR GLY A -3 UNP Q2YKI4 EXPRESSION TAG SEQADV 8SQR PRO A -2 UNP Q2YKI4 EXPRESSION TAG SEQADV 8SQR GLY A -1 UNP Q2YKI4 EXPRESSION TAG SEQADV 8SQR SER A 0 UNP Q2YKI4 EXPRESSION TAG SEQADV 8SQR LEU A 16 UNP Q2YKI4 PHE 16 ENGINEERED MUTATION SEQRES 1 A 165 GLY PRO GLY SER MET LYS GLY GLU PRO LYS VAL ILE GLU SEQRES 2 A 165 ARG LEU ASN GLU ALA LEU LEU LEU GLU LEU GLY ALA VAL SEQRES 3 A 165 ASN GLN TYR TRP LEU HIS TYR ARG LEU LEU ASN ASP TRP SEQRES 4 A 165 GLY TYR THR ARG LEU ALA LYS LYS GLU ARG GLU GLU SER SEQRES 5 A 165 ILE GLU GLU MET HIS HIS ALA ASP LYS LEU ILE ASP ARG SEQRES 6 A 165 ILE ILE PHE LEU GLU GLY PHE PRO ASN LEU GLN THR VAL SEQRES 7 A 165 SER PRO LEU ARG ILE GLY GLN ASN VAL LYS GLU VAL LEU SEQRES 8 A 165 GLU ALA ASP LEU LYS GLY GLU TYR ASP ALA ARG ALA SER SEQRES 9 A 165 TYR LYS GLU SER ARG GLU ILE CYS ASP LYS LEU GLY ASP SEQRES 10 A 165 TYR VAL SER LYS GLN LEU PHE ASP GLU LEU LEU ALA ASP SEQRES 11 A 165 GLU GLU GLY HIS ILE ASP PHE LEU GLU THR GLN LEU ASP SEQRES 12 A 165 LEU LEU ALA LYS ILE GLY GLY GLU ARG TYR GLY GLN LEU SEQRES 13 A 165 ASN ALA ALA PRO ALA ASP GLU ALA GLU HET MG A 201 1 HET MG A 202 1 HET SO4 A 203 5 HET SO4 A 204 5 HET CL A 205 1 HET CL A 206 1 HET CL A 207 1 HET FE2 A 208 1 HET FE2 A 209 1 HET FE2 A 210 1 HET FE2 A 211 1 HET FE2 A 212 1 HET ACT A 213 4 HET HEM A 214 43 HET MPD A 215 8 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM FE2 FE (II) ION HETNAM ACT ACETATE ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN HEM HEME FORMUL 2 MG 2(MG 2+) FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 CL 3(CL 1-) FORMUL 9 FE2 5(FE 2+) FORMUL 14 ACT C2 H3 O2 1- FORMUL 15 HEM C34 H32 FE N4 O4 FORMUL 16 MPD C6 H14 O2 FORMUL 17 HOH *122(H2 O) HELIX 1 AA1 GLU A 4 GLY A 36 1 33 HELIX 2 AA2 TYR A 37 LEU A 65 1 29 HELIX 3 AA3 ASN A 82 GLY A 112 1 31 HELIX 4 AA4 ASP A 113 GLY A 145 1 33 HELIX 5 AA5 GLY A 145 ASN A 153 1 9 LINK OE1 GLU A 18 FE FE2 A 208 1555 1555 2.35 LINK OE2 GLU A 18 FE FE2 A 208 1555 1555 2.25 LINK OE2 GLU A 46 FE FE2 A 211 1555 1555 2.63 LINK OE1 GLU A 47 FE FE2 A 212 1555 1555 2.72 LINK OE1 GLU A 50 FE FE2 A 210 1555 1555 2.53 LINK OE2 GLU A 50 FE FE2 A 211 1555 1555 2.33 LINK OE1 GLU A 51 FE FE2 A 208 1555 1555 2.29 LINK OE2 GLU A 51 FE FE2 A 209 1555 1555 2.34 LINK SD MET A 52 FE HEM A 214 1555 1555 2.28 LINK SD MET A 52 FE HEM A 214 1555 13555 2.39 LINK OE1 GLU A 94 FE FE2 A 209 1555 1555 2.17 LINK OE2 GLU A 94 FE FE2 A 209 1555 1555 2.40 LINK OE1 GLU A 106 MG MG A 202 1555 1555 2.14 LINK OE2 GLU A 127 FE FE2 A 208 1555 1555 2.41 LINK OE1 GLU A 127 FE FE2 A 209 1555 1555 2.28 LINK ND1 HIS A 130 FE FE2 A 209 1555 1555 2.45 LINK MG MG A 201 O HOH A 325 1555 1555 2.44 LINK MG MG A 201 O HOH A 325 1555 5555 2.44 LINK MG MG A 201 O HOH A 368 1555 1555 2.35 LINK MG MG A 201 O HOH A 368 1555 5555 2.35 LINK MG MG A 202 O HOH A 326 1555 9555 2.06 LINK MG MG A 202 O HOH A 330 1555 9555 2.21 LINK MG MG A 202 O HOH A 331 1555 1555 2.07 LINK MG MG A 202 O HOH A 372 1555 1555 2.08 LINK MG MG A 202 O HOH A 393 1555 1555 2.06 LINK O4 SO4 A 203 FE FE2 A 210 1555 1555 2.73 LINK O2 SO4 A 203 FE FE2 A 211 1555 1555 2.78 LINK FE FE2 A 208 OXT ACT A 213 1555 1555 2.32 LINK FE FE2 A 209 O ACT A 213 1555 1555 2.36 LINK FE FE2 A 211 O HOH A 310 1555 1555 2.68 CRYST1 113.032 113.032 113.032 90.00 90.00 90.00 P 4 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008847 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008847 0.00000