HEADER TRANSFERASE 08-MAY-23 8SSP TITLE AURA BOUND TO DANUSERTIB AND ACTIVATING MONOBODY MB1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,ARK-1,AURORA-RELATED COMPND 5 KINASE 1,BREAST TUMOR-AMPLIFIED KINASE,IPL1- AND AURORA-RELATED COMPND 6 KINASE 1,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE-PROTEIN COMPND 7 KINASE 6,SERINE/THREONINE-PROTEIN KINASE AYK1,SERINE/THREONINE- COMPND 8 PROTEIN KINASE AURORA-A; COMPND 9 EC: 2.7.11.1; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: MB1; COMPND 13 CHAIN: B; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, KINASE, MONOBODY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.LUDEWIG,C.KIM,D.KERN REVDAT 1 06-SEP-23 8SSP 0 JRNL AUTH C.KIM,H.LUDEWIG,A.HADZIPASIC,S.KUTTER,V.NGUYEN,D.KERN JRNL TITL A BIOPHYSICAL FRAMEWORK FOR DOUBLE-DRUGGING KINASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 11120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37590418 JRNL DOI 10.1073/PNAS.2304611120 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 15468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4000 - 5.2000 1.00 1917 134 0.1826 0.2408 REMARK 3 2 5.2000 - 4.1300 1.00 1826 131 0.1455 0.1642 REMARK 3 3 4.1300 - 3.6100 1.00 1788 140 0.1624 0.2512 REMARK 3 4 3.6100 - 3.2800 1.00 1797 139 0.2052 0.2499 REMARK 3 5 3.2800 - 3.0400 1.00 1777 125 0.2385 0.3266 REMARK 3 6 3.0400 - 2.8600 1.00 1787 134 0.2542 0.3269 REMARK 3 7 2.8600 - 2.7200 0.99 1762 122 0.2785 0.3622 REMARK 3 8 2.7200 - 2.6000 0.99 1749 140 0.3004 0.3635 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.358 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.442 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3045 REMARK 3 ANGLE : 0.449 4128 REMARK 3 CHIRALITY : 0.041 437 REMARK 3 PLANARITY : 0.004 518 REMARK 3 DIHEDRAL : 6.909 434 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9605 -10.2665 -21.0196 REMARK 3 T TENSOR REMARK 3 T11: 0.7411 T22: 0.2585 REMARK 3 T33: 0.3611 T12: 0.0961 REMARK 3 T13: 0.0269 T23: 0.0579 REMARK 3 L TENSOR REMARK 3 L11: 5.3278 L22: 2.7968 REMARK 3 L33: 2.5064 L12: 0.3991 REMARK 3 L13: -2.0336 L23: -0.5099 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: -0.2272 S13: 0.0260 REMARK 3 S21: 0.8628 S22: 0.0127 S23: 0.1600 REMARK 3 S31: -0.6304 S32: -0.1977 S33: -0.0537 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6102 -22.8731 -25.4185 REMARK 3 T TENSOR REMARK 3 T11: 0.4540 T22: 0.2232 REMARK 3 T33: 0.3026 T12: 0.0187 REMARK 3 T13: -0.0291 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.5185 L22: 3.9936 REMARK 3 L33: 2.7148 L12: -0.5743 REMARK 3 L13: -0.6981 L23: 0.3526 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: -0.1307 S13: 0.0765 REMARK 3 S21: 0.6800 S22: 0.0749 S23: 0.1379 REMARK 3 S31: -0.2905 S32: -0.0339 S33: -0.0443 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6668 -27.2931 -27.6821 REMARK 3 T TENSOR REMARK 3 T11: 0.3693 T22: 0.1406 REMARK 3 T33: 0.1902 T12: 0.0271 REMARK 3 T13: 0.0619 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 4.2402 L22: 6.1190 REMARK 3 L33: 6.8220 L12: 1.4230 REMARK 3 L13: -1.0342 L23: -4.7275 REMARK 3 S TENSOR REMARK 3 S11: -0.2061 S12: 0.1314 S13: -0.2709 REMARK 3 S21: 0.4396 S22: 0.3945 S23: 0.0898 REMARK 3 S31: 0.4939 S32: -0.2669 S33: -0.0602 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7100 -37.9887 -21.8767 REMARK 3 T TENSOR REMARK 3 T11: 0.8459 T22: 0.3414 REMARK 3 T33: 0.3488 T12: -0.1123 REMARK 3 T13: 0.0616 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 1.1984 L22: 0.6214 REMARK 3 L33: 0.5757 L12: -0.8972 REMARK 3 L13: 0.7358 L23: -0.3917 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: -0.1878 S13: -0.1217 REMARK 3 S21: 0.8657 S22: 0.2258 S23: 0.1473 REMARK 3 S31: 0.1917 S32: -0.2856 S33: -0.2544 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2281 -42.5140 -36.1058 REMARK 3 T TENSOR REMARK 3 T11: 0.4982 T22: 0.2052 REMARK 3 T33: 0.2385 T12: -0.0475 REMARK 3 T13: 0.0143 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 3.6512 L22: 5.1013 REMARK 3 L33: 2.3644 L12: 0.9502 REMARK 3 L13: -0.7540 L23: -0.6055 REMARK 3 S TENSOR REMARK 3 S11: -0.1217 S12: 0.1388 S13: -0.2888 REMARK 3 S21: 0.0155 S22: 0.0284 S23: -0.0858 REMARK 3 S31: 0.7079 S32: -0.2521 S33: 0.1476 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2378 -34.7324 -33.8276 REMARK 3 T TENSOR REMARK 3 T11: 0.4404 T22: 0.1652 REMARK 3 T33: 0.4870 T12: 0.0612 REMARK 3 T13: -0.0823 T23: 0.1111 REMARK 3 L TENSOR REMARK 3 L11: 4.5046 L22: 1.7508 REMARK 3 L33: 5.5248 L12: -1.4222 REMARK 3 L13: -0.5908 L23: -1.9705 REMARK 3 S TENSOR REMARK 3 S11: -0.1111 S12: 0.4150 S13: -0.4641 REMARK 3 S21: 0.5874 S22: -0.1839 S23: -1.0619 REMARK 3 S31: 0.5948 S32: 0.6259 S33: 0.5340 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9983 -40.2021 4.6595 REMARK 3 T TENSOR REMARK 3 T11: 0.9321 T22: 0.6903 REMARK 3 T33: 0.5367 T12: 0.0274 REMARK 3 T13: -0.1268 T23: 0.2550 REMARK 3 L TENSOR REMARK 3 L11: 5.3805 L22: 5.1048 REMARK 3 L33: 2.5655 L12: 0.7676 REMARK 3 L13: 2.5287 L23: 1.8144 REMARK 3 S TENSOR REMARK 3 S11: -0.1157 S12: -0.4783 S13: -0.6019 REMARK 3 S21: 1.3172 S22: -0.4256 S23: -0.3707 REMARK 3 S31: 0.3009 S32: 0.9426 S33: 0.6277 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5778 -26.4167 -0.9311 REMARK 3 T TENSOR REMARK 3 T11: 1.2557 T22: 0.6296 REMARK 3 T33: 0.5069 T12: 0.1099 REMARK 3 T13: 0.0525 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 3.7972 L22: 4.6939 REMARK 3 L33: 2.3316 L12: -3.6414 REMARK 3 L13: 4.9647 L23: -6.7156 REMARK 3 S TENSOR REMARK 3 S11: 0.0344 S12: -0.9609 S13: -0.1681 REMARK 3 S21: 1.4406 S22: 0.2694 S23: 0.7401 REMARK 3 S31: -0.7728 S32: -1.3376 S33: -0.6970 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1331 -28.2328 18.2982 REMARK 3 T TENSOR REMARK 3 T11: 2.2617 T22: 1.3627 REMARK 3 T33: 0.4411 T12: -0.5729 REMARK 3 T13: -0.4003 T23: -0.2038 REMARK 3 L TENSOR REMARK 3 L11: 1.9727 L22: 1.2709 REMARK 3 L33: 2.6956 L12: -0.3083 REMARK 3 L13: 1.0170 L23: 1.4643 REMARK 3 S TENSOR REMARK 3 S11: -0.5310 S12: -0.4430 S13: 0.8453 REMARK 3 S21: -0.7842 S22: 0.3201 S23: -0.1335 REMARK 3 S31: -1.7767 S32: 1.4631 S33: 0.2422 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5846 -30.6185 4.8885 REMARK 3 T TENSOR REMARK 3 T11: 1.3025 T22: 0.5582 REMARK 3 T33: 0.3583 T12: -0.0615 REMARK 3 T13: -0.1406 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 3.0382 L22: 2.4389 REMARK 3 L33: 2.2716 L12: -0.9522 REMARK 3 L13: -0.4195 L23: -1.8676 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: -0.3399 S13: -0.2041 REMARK 3 S21: 0.4578 S22: 0.0222 S23: 0.2271 REMARK 3 S31: -1.4918 S32: 0.1446 S33: 0.1067 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SSP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274389. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15516 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 45.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.19330 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.34100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF AURA IN COMPLEX WITH MB1 REMARK 280 AND DANUSERTIB WERE OBTAINED BY COMBINING 2 UL OF 300 UM (10 MG/ REMARK 280 ML) AURA + 315 UM (4 MG/ML) MB1 + 2 MM AMPPCP + 4 MM MGCL2 WITH REMARK 280 2 UL RESERVOIR OF 0.1 M MES PH 6.5 + 0.2 M AMMONIUM SULFATE + 4% REMARK 280 (V/V) 1,3-PROPANEDIOL + 15-18% PEG 8000. STREAK SEEDING WAS USED REMARK 280 TO OBTAIN BIGGER CRYSTALS. CRYSTALS WERE GROWN AT 18 DEGC BY REMARK 280 HANGING DROP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.75850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.40250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 71.56500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.75850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.40250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.56500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.75850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.40250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.56500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.75850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.40250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 71.56500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 668 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 120 REMARK 465 ASP A 121 REMARK 465 GLU A 122 REMARK 465 SER A 123 REMARK 465 LYS A 124 REMARK 465 LYS A 125 REMARK 465 PRO A 390 REMARK 465 SER A 391 REMARK 465 ASN A 392 REMARK 465 CYS A 393 REMARK 465 GLN A 394 REMARK 465 ASN A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 SER A 398 REMARK 465 ALA A 399 REMARK 465 SER A 400 REMARK 465 LYS A 401 REMARK 465 GLN A 402 REMARK 465 SER A 403 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 VAL B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 VAL B 6 REMARK 465 PRO B 7 REMARK 465 THR B 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 -156.51 -109.58 REMARK 500 SER A 226 -53.36 63.73 REMARK 500 ASP A 256 48.48 -155.44 REMARK 500 ASP A 274 88.12 55.06 REMARK 500 ASP A 307 -146.88 -135.67 REMARK 500 LEU A 364 56.88 -94.21 REMARK 500 VAL B 51 122.43 67.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 701 DISTANCE = 6.05 ANGSTROMS DBREF 8SSP A 122 403 UNP O14965 AURKA_HUMAN 122 403 DBREF 8SSP B 1 96 PDB 8SSP 8SSP 1 96 SEQADV 8SSP VAL A 120 UNP O14965 EXPRESSION TAG SEQADV 8SSP ASP A 121 UNP O14965 EXPRESSION TAG SEQRES 1 A 284 VAL ASP GLU SER LYS LYS ARG GLN TRP ALA LEU GLU ASP SEQRES 2 A 284 PHE GLU ILE GLY ARG PRO LEU GLY LYS GLY LYS PHE GLY SEQRES 3 A 284 ASN VAL TYR LEU ALA ARG GLU LYS GLN SER LYS PHE ILE SEQRES 4 A 284 LEU ALA LEU LYS VAL LEU PHE LYS ALA GLN LEU GLU LYS SEQRES 5 A 284 ALA GLY VAL GLU HIS GLN LEU ARG ARG GLU VAL GLU ILE SEQRES 6 A 284 GLN SER HIS LEU ARG HIS PRO ASN ILE LEU ARG LEU TYR SEQRES 7 A 284 GLY TYR PHE HIS ASP ALA THR ARG VAL TYR LEU ILE LEU SEQRES 8 A 284 GLU TYR ALA PRO LEU GLY THR VAL TYR ARG GLU LEU GLN SEQRES 9 A 284 LYS LEU SER LYS PHE ASP GLU GLN ARG THR ALA THR TYR SEQRES 10 A 284 ILE THR GLU LEU ALA ASN ALA LEU SER TYR CYS HIS SER SEQRES 11 A 284 LYS ARG VAL ILE HIS ARG ASP ILE LYS PRO GLU ASN LEU SEQRES 12 A 284 LEU LEU GLY SER ALA GLY GLU LEU LYS ILE ALA ASP PHE SEQRES 13 A 284 GLY TRP SER VAL HIS ALA PRO SER SER ARG ARG THR THR SEQRES 14 A 284 LEU CYS GLY THR LEU ASP TYR LEU PRO PRO GLU MET ILE SEQRES 15 A 284 GLU GLY ARG MET HIS ASP GLU LYS VAL ASP LEU TRP SER SEQRES 16 A 284 LEU GLY VAL LEU CYS TYR GLU PHE LEU VAL GLY LYS PRO SEQRES 17 A 284 PRO PHE GLU ALA ASN THR TYR GLN GLU THR TYR LYS ARG SEQRES 18 A 284 ILE SER ARG VAL GLU PHE THR PHE PRO ASP PHE VAL THR SEQRES 19 A 284 GLU GLY ALA ARG ASP LEU ILE SER ARG LEU LEU LYS HIS SEQRES 20 A 284 ASN PRO SER GLN ARG PRO MET LEU ARG GLU VAL LEU GLU SEQRES 21 A 284 HIS PRO TRP ILE THR ALA ASN SER SER LYS PRO SER ASN SEQRES 22 A 284 CYS GLN ASN LYS GLU SER ALA SER LYS GLN SER SEQRES 1 B 96 GLY SER VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL SEQRES 2 B 96 ALA ALA THR PRO THR SER LEU LEU ILE SER TRP ASP ALA SEQRES 3 B 96 GLN THR TYR GLN MET TYR ASP TYR VAL SER TYR TYR ARG SEQRES 4 B 96 ILE THR TYR GLY GLU THR GLY GLY ASN SER PRO VAL GLN SEQRES 5 B 96 GLU PHE THR VAL PRO GLY TYR TYR SER THR ALA THR ILE SEQRES 6 B 96 SER GLY LEU LYS PRO GLY VAL ASP TYR THR ILE THR VAL SEQRES 7 B 96 TYR ALA GLU GLY TYR TYR SER SER TYR SER PRO ILE SER SEQRES 8 B 96 ILE ASN TYR ARG THR HET EDO A 501 4 HET SO4 A 502 5 HET MES A 503 12 HET EDO A 504 4 HET EDO A 505 4 HET PO4 A 506 5 HET PDO A 507 5 HET EDO A 508 4 HET EDO A 509 4 HET 627 A 510 35 HET SO4 A 511 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM PO4 PHOSPHATE ION HETNAM PDO 1,3-PROPANDIOL HETNAM 627 N-[(3E)-5-[(2R)-2-METHOXY-2-PHENYLACETYL]PYRROLO[3,4- HETNAM 2 627 C]PYRAZOL-3(5H)-YLIDENE]-4-(4-METHYLPIPERAZIN-1-YL) HETNAM 3 627 BENZAMIDE HETSYN EDO ETHYLENE GLYCOL HETSYN 627 DANUSERTIB; PHA-739358 FORMUL 3 EDO 5(C2 H6 O2) FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 MES C6 H13 N O4 S FORMUL 8 PO4 O4 P 3- FORMUL 9 PDO C3 H8 O2 FORMUL 12 627 C26 H30 N6 O3 FORMUL 14 HOH *112(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 SER A 186 1 13 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 282 SER A 284 5 3 HELIX 8 AA8 THR A 292 LEU A 296 5 5 HELIX 9 AA9 PRO A 297 GLU A 302 1 6 HELIX 10 AB1 GLU A 308 GLY A 325 1 18 HELIX 11 AB2 THR A 333 ARG A 343 1 11 HELIX 12 AB3 THR A 353 LEU A 364 1 12 HELIX 13 AB4 ASN A 367 ARG A 371 5 5 HELIX 14 AB5 MET A 373 GLU A 379 1 7 HELIX 15 AB6 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 PHE A 157 PHE A 165 -1 O LEU A 159 N ALA A 150 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 SHEET 1 AA4 3 GLU B 11 THR B 16 0 SHEET 2 AA4 3 SER B 19 SER B 23 -1 O LEU B 21 N VAL B 13 SHEET 3 AA4 3 THR B 62 SER B 66 -1 O ILE B 65 N LEU B 20 SHEET 1 AA5 4 GLN B 52 PRO B 57 0 SHEET 2 AA5 4 VAL B 35 GLU B 44 -1 N TYR B 38 O VAL B 56 SHEET 3 AA5 4 ASP B 73 GLY B 82 -1 O TYR B 79 N ARG B 39 SHEET 4 AA5 4 ILE B 90 ARG B 95 -1 O ILE B 92 N ILE B 76 CRYST1 75.517 90.805 143.130 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013242 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011013 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006987 0.00000