HEADER TRANSFERASE 26-MAY-23 8SZ3 TITLE STRUCTURE OF HUMAN BETA 1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 2 WITH TITLE 2 COMPOUND 7J COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLLACTOSAMINIDE BETA-1,3-N- COMPND 3 ACETYLGLUCOSAMINYLTRANSFERASE 2; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1,BGNT-1,3-GN-T1, COMPND 6 BETA3GN-T1,3-GALACTOSYLTRANSFERASE 7,3-GALTASE 7,BETA3GAL-T7, COMPND 7 BETA3GALT7,B3GAL-T7,BETA-3-GX-T7,UDP-GAL:BETA-GLCNAC BETA-1,UDP- COMPND 8 GLCNAC:BETAGAL BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 2,BGNT-2,3- COMPND 9 GN-T2,BETA3GN-T2,UDP-GALACTOSE:BETA-N-ACETYLGLUCOSAMINE BETA-1; COMPND 10 EC: 2.4.1.149; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: B3GNT2, B3GALT7, B3GNT1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ACETYLGLUCOSAMINYLTRANSFERASE, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SUDOM,X.MIN REVDAT 2 27-DEC-23 8SZ3 1 JRNL REVDAT 1 06-DEC-23 8SZ3 0 JRNL AUTH J.J.JACKSON,A.C.SIEGMUND,W.J.BAI,A.B.REED,A.B.BIRKHOLZ, JRNL AUTH 2 I.D.G.CAMPUZANO,A.CREQUER-GRANDHOMME,R.HU,R.V.MODAK,A.SUDOM, JRNL AUTH 3 N.JAVIER,C.SANDERS,M.C.LO,F.XIE,V.J.CEE,P.MANZANILLO, JRNL AUTH 4 J.G.ALLEN JRNL TITL IMIDAZOLONE AS AN AMIDE BIOISOSTERE IN THE DEVELOPMENT OF JRNL TITL 2 BETA-1,3- N -ACETYLGLUCOSAMINYLTRANSFERASE 2 (B3GNT2) JRNL TITL 3 INHIBITORS. JRNL REF J.MED.CHEM. V. 66 16120 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37988652 JRNL DOI 10.1021/ACS.JMEDCHEM.3C01517 REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 33164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.263 REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1400 - 5.2900 0.97 2693 145 0.2151 0.2197 REMARK 3 2 5.2900 - 4.2100 0.98 2669 128 0.1985 0.2612 REMARK 3 3 4.2100 - 3.6800 0.97 2610 121 0.2252 0.2326 REMARK 3 4 3.6800 - 3.3400 0.97 2598 152 0.2657 0.2861 REMARK 3 5 3.3400 - 3.1000 0.99 2638 144 0.2780 0.2943 REMARK 3 6 3.1000 - 2.9200 0.99 2686 125 0.2932 0.3589 REMARK 3 7 2.9200 - 2.7700 0.99 2632 150 0.3241 0.3560 REMARK 3 8 2.7700 - 2.6500 0.99 2634 138 0.3269 0.3391 REMARK 3 9 2.6500 - 2.5500 0.99 2629 143 0.3295 0.3420 REMARK 3 10 2.5500 - 2.4600 0.99 2676 123 0.3210 0.3408 REMARK 3 11 2.4600 - 2.3800 0.99 2640 135 0.3608 0.3818 REMARK 3 12 2.3800 - 2.3200 0.91 2440 115 0.3752 0.4484 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5628 REMARK 3 ANGLE : 0.727 7624 REMARK 3 CHIRALITY : 0.045 830 REMARK 3 PLANARITY : 0.005 959 REMARK 3 DIHEDRAL : 6.250 754 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SZ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000273588. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33310 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 29.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7JHK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.0, 0.2 M SODIUM REMARK 280 ACETATE, 17% PEG 4000, 15% GLYCEROL, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.18750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.20250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.18750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.20250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -27.88287 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 124.94563 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 GLY A 4 REMARK 465 ARG A 5 REMARK 465 ARG A 6 REMARK 465 ARG A 7 REMARK 465 ILE A 8 REMARK 465 LYS A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 ILE A 13 REMARK 465 LEU A 14 REMARK 465 MET A 15 REMARK 465 MET A 16 REMARK 465 ALA A 17 REMARK 465 ASN A 18 REMARK 465 VAL A 19 REMARK 465 PHE A 20 REMARK 465 ILE A 21 REMARK 465 TYR A 22 REMARK 465 PHE A 23 REMARK 465 ILE A 24 REMARK 465 MET A 25 REMARK 465 GLU A 26 REMARK 465 VAL A 27 REMARK 465 SER A 28 REMARK 465 LYS A 29 REMARK 465 SER A 30 REMARK 465 SER A 31 REMARK 465 SER A 32 REMARK 465 GLN A 33 REMARK 465 GLU A 34 REMARK 465 LYS A 35 REMARK 465 ASN A 36 REMARK 465 GLY A 37 REMARK 465 LYS A 38 REMARK 465 GLY A 39 REMARK 465 GLU A 40 REMARK 465 VAL A 41 REMARK 465 ILE A 42 REMARK 465 ILE A 43 REMARK 465 PRO A 44 REMARK 465 LYS A 45 REMARK 465 GLU A 46 REMARK 465 LYS A 47 REMARK 465 PHE A 48 REMARK 465 TRP A 49 REMARK 465 LYS A 50 REMARK 465 ILE A 51 REMARK 465 SER A 52 REMARK 465 THR A 53 REMARK 465 PRO A 54 REMARK 465 PRO A 55 REMARK 465 PRO A 72 REMARK 465 ILE A 73 REMARK 465 LEU A 74 REMARK 465 SER A 75 REMARK 465 MET A 76 REMARK 465 LEU A 77 REMARK 465 THR A 78 REMARK 465 ASN A 79 REMARK 465 GLN A 80 REMARK 465 THR A 81 REMARK 465 GLY A 82 REMARK 465 GLU A 83 REMARK 465 ALA A 84 REMARK 465 GLY A 85 REMARK 465 ARG A 86 REMARK 465 LEU A 87 REMARK 465 SER A 88 REMARK 465 ASN A 89 REMARK 465 ILE A 90 REMARK 465 ASN A 170 REMARK 465 ALA A 171 REMARK 465 GLY A 172 REMARK 465 ASN A 173 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 VAL B 3 REMARK 465 GLY B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 ARG B 7 REMARK 465 ILE B 8 REMARK 465 LYS B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 GLY B 12 REMARK 465 ILE B 13 REMARK 465 LEU B 14 REMARK 465 MET B 15 REMARK 465 MET B 16 REMARK 465 ALA B 17 REMARK 465 ASN B 18 REMARK 465 VAL B 19 REMARK 465 PHE B 20 REMARK 465 ILE B 21 REMARK 465 TYR B 22 REMARK 465 PHE B 23 REMARK 465 ILE B 24 REMARK 465 MET B 25 REMARK 465 GLU B 26 REMARK 465 VAL B 27 REMARK 465 SER B 28 REMARK 465 LYS B 29 REMARK 465 SER B 30 REMARK 465 SER B 31 REMARK 465 SER B 32 REMARK 465 GLN B 33 REMARK 465 GLU B 34 REMARK 465 LYS B 35 REMARK 465 ASN B 36 REMARK 465 GLY B 37 REMARK 465 LYS B 38 REMARK 465 GLY B 39 REMARK 465 GLU B 40 REMARK 465 VAL B 41 REMARK 465 ILE B 42 REMARK 465 ILE B 43 REMARK 465 PRO B 44 REMARK 465 LYS B 45 REMARK 465 GLU B 46 REMARK 465 LYS B 47 REMARK 465 PHE B 48 REMARK 465 TRP B 49 REMARK 465 LYS B 50 REMARK 465 ILE B 51 REMARK 465 SER B 52 REMARK 465 THR B 53 REMARK 465 PRO B 54 REMARK 465 PRO B 55 REMARK 465 MET B 76 REMARK 465 LEU B 77 REMARK 465 THR B 78 REMARK 465 ASN B 79 REMARK 465 GLN B 80 REMARK 465 THR B 81 REMARK 465 GLY B 82 REMARK 465 GLU B 83 REMARK 465 ALA B 84 REMARK 465 GLY B 85 REMARK 465 ARG B 86 REMARK 465 LEU B 87 REMARK 465 SER B 88 REMARK 465 ASN B 89 REMARK 465 ILE B 90 REMARK 465 ASN B 170 REMARK 465 ALA B 171 REMARK 465 GLY B 172 REMARK 465 ASN B 173 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 354 O HOH A 501 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 67 44.92 -78.12 REMARK 500 ARG A 68 -46.27 -139.43 REMARK 500 ASP A 99 92.15 -65.08 REMARK 500 LYS A 141 99.41 -35.91 REMARK 500 SER A 164 -107.34 -125.47 REMARK 500 THR A 185 75.79 -113.71 REMARK 500 ASN A 212 47.11 -101.06 REMARK 500 LEU A 259 5.77 -65.36 REMARK 500 SER A 261 41.84 -68.31 REMARK 500 ALA A 267 9.09 -62.24 REMARK 500 ASN A 278 15.15 57.68 REMARK 500 TYR A 289 31.63 -95.02 REMARK 500 ASP A 357 -151.54 77.19 REMARK 500 GLU A 359 95.57 -30.42 REMARK 500 GLU A 360 -77.31 10.61 REMARK 500 ASN A 362 48.69 -76.77 REMARK 500 LEU B 93 -33.29 -131.60 REMARK 500 LYS B 141 100.18 -39.81 REMARK 500 SER B 164 -112.11 -104.91 REMARK 500 THR B 185 79.25 -114.44 REMARK 500 ASN B 212 49.21 -97.93 REMARK 500 CYS B 235 48.31 -149.92 REMARK 500 LEU B 259 5.71 -60.90 REMARK 500 SER B 261 40.05 -82.38 REMARK 500 ALA B 267 3.09 -69.68 REMARK 500 ASN B 278 18.72 54.43 REMARK 500 TYR B 289 37.70 -95.75 REMARK 500 PHE B 356 52.79 -113.19 REMARK 500 ASP B 357 -156.01 62.21 REMARK 500 GLU B 359 147.09 -36.89 REMARK 500 GLU B 360 97.94 -20.55 REMARK 500 LYS B 361 36.93 15.28 REMARK 500 ASN B 362 61.34 -117.37 REMARK 500 LEU B 395 -66.04 -93.65 REMARK 500 LYS B 396 5.05 -63.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SZ3 A 1 397 UNP Q9NY97 B3GN2_HUMAN 1 397 DBREF 8SZ3 B 1 397 UNP Q9NY97 B3GN2_HUMAN 1 397 SEQRES 1 A 397 MET SER VAL GLY ARG ARG ARG ILE LYS LEU LEU GLY ILE SEQRES 2 A 397 LEU MET MET ALA ASN VAL PHE ILE TYR PHE ILE MET GLU SEQRES 3 A 397 VAL SER LYS SER SER SER GLN GLU LYS ASN GLY LYS GLY SEQRES 4 A 397 GLU VAL ILE ILE PRO LYS GLU LYS PHE TRP LYS ILE SER SEQRES 5 A 397 THR PRO PRO GLU ALA TYR TRP ASN ARG GLU GLN GLU LYS SEQRES 6 A 397 LEU ASN ARG GLN TYR ASN PRO ILE LEU SER MET LEU THR SEQRES 7 A 397 ASN GLN THR GLY GLU ALA GLY ARG LEU SER ASN ILE SER SEQRES 8 A 397 HIS LEU ASN TYR CYS GLU PRO ASP LEU ARG VAL THR SER SEQRES 9 A 397 VAL VAL THR GLY PHE ASN ASN LEU PRO ASP ARG PHE LYS SEQRES 10 A 397 ASP PHE LEU LEU TYR LEU ARG CYS ARG ASN TYR SER LEU SEQRES 11 A 397 LEU ILE ASP GLN PRO ASP LYS CYS ALA LYS LYS PRO PHE SEQRES 12 A 397 LEU LEU LEU ALA ILE LYS SER LEU THR PRO HIS PHE ALA SEQRES 13 A 397 ARG ARG GLN ALA ILE ARG GLU SER TRP GLY GLN GLU SER SEQRES 14 A 397 ASN ALA GLY ASN GLN THR VAL VAL ARG VAL PHE LEU LEU SEQRES 15 A 397 GLY GLN THR PRO PRO GLU ASP ASN HIS PRO ASP LEU SER SEQRES 16 A 397 ASP MET LEU LYS PHE GLU SER GLU LYS HIS GLN ASP ILE SEQRES 17 A 397 LEU MET TRP ASN TYR ARG ASP THR PHE PHE ASN LEU SER SEQRES 18 A 397 LEU LYS GLU VAL LEU PHE LEU ARG TRP VAL SER THR SER SEQRES 19 A 397 CYS PRO ASP THR GLU PHE VAL PHE LYS GLY ASP ASP ASP SEQRES 20 A 397 VAL PHE VAL ASN THR HIS HIS ILE LEU ASN TYR LEU ASN SEQRES 21 A 397 SER LEU SER LYS THR LYS ALA LYS ASP LEU PHE ILE GLY SEQRES 22 A 397 ASP VAL ILE HIS ASN ALA GLY PRO HIS ARG ASP LYS LYS SEQRES 23 A 397 LEU LYS TYR TYR ILE PRO GLU VAL VAL TYR SER GLY LEU SEQRES 24 A 397 TYR PRO PRO TYR ALA GLY GLY GLY GLY PHE LEU TYR SER SEQRES 25 A 397 GLY HIS LEU ALA LEU ARG LEU TYR HIS ILE THR ASP GLN SEQRES 26 A 397 VAL HIS LEU TYR PRO ILE ASP ASP VAL TYR THR GLY MET SEQRES 27 A 397 CYS LEU GLN LYS LEU GLY LEU VAL PRO GLU LYS HIS LYS SEQRES 28 A 397 GLY PHE ARG THR PHE ASP ILE GLU GLU LYS ASN LYS ASN SEQRES 29 A 397 ASN ILE CYS SER TYR VAL ASP LEU MET LEU VAL HIS SER SEQRES 30 A 397 ARG LYS PRO GLN GLU MET ILE ASP ILE TRP SER GLN LEU SEQRES 31 A 397 GLN SER ALA HIS LEU LYS CYS SEQRES 1 B 397 MET SER VAL GLY ARG ARG ARG ILE LYS LEU LEU GLY ILE SEQRES 2 B 397 LEU MET MET ALA ASN VAL PHE ILE TYR PHE ILE MET GLU SEQRES 3 B 397 VAL SER LYS SER SER SER GLN GLU LYS ASN GLY LYS GLY SEQRES 4 B 397 GLU VAL ILE ILE PRO LYS GLU LYS PHE TRP LYS ILE SER SEQRES 5 B 397 THR PRO PRO GLU ALA TYR TRP ASN ARG GLU GLN GLU LYS SEQRES 6 B 397 LEU ASN ARG GLN TYR ASN PRO ILE LEU SER MET LEU THR SEQRES 7 B 397 ASN GLN THR GLY GLU ALA GLY ARG LEU SER ASN ILE SER SEQRES 8 B 397 HIS LEU ASN TYR CYS GLU PRO ASP LEU ARG VAL THR SER SEQRES 9 B 397 VAL VAL THR GLY PHE ASN ASN LEU PRO ASP ARG PHE LYS SEQRES 10 B 397 ASP PHE LEU LEU TYR LEU ARG CYS ARG ASN TYR SER LEU SEQRES 11 B 397 LEU ILE ASP GLN PRO ASP LYS CYS ALA LYS LYS PRO PHE SEQRES 12 B 397 LEU LEU LEU ALA ILE LYS SER LEU THR PRO HIS PHE ALA SEQRES 13 B 397 ARG ARG GLN ALA ILE ARG GLU SER TRP GLY GLN GLU SER SEQRES 14 B 397 ASN ALA GLY ASN GLN THR VAL VAL ARG VAL PHE LEU LEU SEQRES 15 B 397 GLY GLN THR PRO PRO GLU ASP ASN HIS PRO ASP LEU SER SEQRES 16 B 397 ASP MET LEU LYS PHE GLU SER GLU LYS HIS GLN ASP ILE SEQRES 17 B 397 LEU MET TRP ASN TYR ARG ASP THR PHE PHE ASN LEU SER SEQRES 18 B 397 LEU LYS GLU VAL LEU PHE LEU ARG TRP VAL SER THR SER SEQRES 19 B 397 CYS PRO ASP THR GLU PHE VAL PHE LYS GLY ASP ASP ASP SEQRES 20 B 397 VAL PHE VAL ASN THR HIS HIS ILE LEU ASN TYR LEU ASN SEQRES 21 B 397 SER LEU SER LYS THR LYS ALA LYS ASP LEU PHE ILE GLY SEQRES 22 B 397 ASP VAL ILE HIS ASN ALA GLY PRO HIS ARG ASP LYS LYS SEQRES 23 B 397 LEU LYS TYR TYR ILE PRO GLU VAL VAL TYR SER GLY LEU SEQRES 24 B 397 TYR PRO PRO TYR ALA GLY GLY GLY GLY PHE LEU TYR SER SEQRES 25 B 397 GLY HIS LEU ALA LEU ARG LEU TYR HIS ILE THR ASP GLN SEQRES 26 B 397 VAL HIS LEU TYR PRO ILE ASP ASP VAL TYR THR GLY MET SEQRES 27 B 397 CYS LEU GLN LYS LEU GLY LEU VAL PRO GLU LYS HIS LYS SEQRES 28 B 397 GLY PHE ARG THR PHE ASP ILE GLU GLU LYS ASN LYS ASN SEQRES 29 B 397 ASN ILE CYS SER TYR VAL ASP LEU MET LEU VAL HIS SER SEQRES 30 B 397 ARG LYS PRO GLN GLU MET ILE ASP ILE TRP SER GLN LEU SEQRES 31 B 397 GLN SER ALA HIS LEU LYS CYS HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET X18 A 401 28 HET EDO A 402 4 HET X18 B 401 28 HET EDO B 402 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM X18 N-[(1S)-1-(5-BROMOPYRIDIN-2-YL)ETHYL]-3-[(2R)-3,3- HETNAM 2 X18 DIMETHYLBUTAN-2-YL]-2-OXO-2,3-DIHYDRO-1H- HETNAM 3 X18 BENZIMIDAZOLE-5-CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 7 X18 2(C21 H25 BR N4 O2) FORMUL 8 EDO 2(C2 H6 O2) FORMUL 11 HOH *67(H2 O) HELIX 1 AA1 ALA A 57 TYR A 70 1 14 HELIX 2 AA2 LEU A 100 VAL A 106 1 7 HELIX 3 AA3 GLY A 108 LEU A 112 5 5 HELIX 4 AA4 PRO A 113 TYR A 122 1 10 HELIX 5 AA5 GLN A 134 ALA A 139 5 6 HELIX 6 AA6 HIS A 154 SER A 164 1 11 HELIX 7 AA7 PRO A 186 ASN A 190 5 5 HELIX 8 AA8 LEU A 194 GLN A 206 1 13 HELIX 9 AA9 THR A 216 PHE A 218 5 3 HELIX 10 AB1 ASN A 219 CYS A 235 1 17 HELIX 11 AB2 ASN A 251 LEU A 259 1 9 HELIX 12 AB3 THR A 265 LEU A 270 1 6 HELIX 13 AB4 GLY A 313 ASP A 324 1 12 HELIX 14 AB5 ILE A 331 LEU A 343 1 13 HELIX 15 AB6 ASN A 365 VAL A 370 5 6 HELIX 16 AB7 LYS A 379 GLN A 391 1 13 HELIX 17 AB8 ALA B 57 ASN B 71 1 15 HELIX 18 AB9 PRO B 72 SER B 75 5 4 HELIX 19 AC1 LEU B 100 VAL B 106 1 7 HELIX 20 AC2 GLY B 108 LEU B 112 5 5 HELIX 21 AC3 PRO B 113 TYR B 122 1 10 HELIX 22 AC4 HIS B 154 SER B 164 1 11 HELIX 23 AC5 PRO B 186 ASN B 190 5 5 HELIX 24 AC6 LEU B 194 GLN B 206 1 13 HELIX 25 AC7 THR B 216 PHE B 218 5 3 HELIX 26 AC8 ASN B 219 CYS B 235 1 17 HELIX 27 AC9 ASN B 251 LEU B 259 1 9 HELIX 28 AD1 GLY B 313 ASP B 324 1 12 HELIX 29 AD2 ILE B 331 LEU B 343 1 13 HELIX 30 AD3 ASN B 365 VAL B 370 5 6 HELIX 31 AD4 LYS B 379 GLN B 391 1 13 SHEET 1 AA1 8 LEU A 130 ILE A 132 0 SHEET 2 AA1 8 ILE A 208 ARG A 214 -1 O MET A 210 N LEU A 131 SHEET 3 AA1 8 VAL A 176 GLN A 184 1 N GLN A 184 O TYR A 213 SHEET 4 AA1 8 LEU A 144 LYS A 149 1 N LEU A 146 O VAL A 177 SHEET 5 AA1 8 PHE A 240 ASP A 245 1 O PHE A 242 N ALA A 147 SHEET 6 AA1 8 TYR A 303 SER A 312 -1 O TYR A 311 N VAL A 241 SHEET 7 AA1 8 PHE A 271 ILE A 276 -1 N ILE A 272 O LEU A 310 SHEET 8 AA1 8 GLU A 348 LYS A 349 1 O GLU A 348 N PHE A 271 SHEET 1 AA2 3 VAL A 248 VAL A 250 0 SHEET 2 AA2 3 LEU A 374 HIS A 376 -1 O VAL A 375 N PHE A 249 SHEET 3 AA2 3 PHE A 353 ARG A 354 1 N ARG A 354 O LEU A 374 SHEET 1 AA3 8 LEU B 130 ILE B 132 0 SHEET 2 AA3 8 ILE B 208 ARG B 214 -1 O MET B 210 N LEU B 131 SHEET 3 AA3 8 VAL B 176 GLN B 184 1 N GLN B 184 O TYR B 213 SHEET 4 AA3 8 LEU B 144 LYS B 149 1 N LEU B 146 O VAL B 177 SHEET 5 AA3 8 PHE B 240 GLY B 244 1 O GLY B 244 N LYS B 149 SHEET 6 AA3 8 TYR B 303 SER B 312 -1 O TYR B 311 N VAL B 241 SHEET 7 AA3 8 PHE B 271 ILE B 276 -1 N ILE B 276 O TYR B 303 SHEET 8 AA3 8 GLU B 348 LYS B 349 1 O GLU B 348 N PHE B 271 SHEET 1 AA4 3 VAL B 248 VAL B 250 0 SHEET 2 AA4 3 LEU B 374 HIS B 376 -1 O VAL B 375 N PHE B 249 SHEET 3 AA4 3 PHE B 353 ARG B 354 1 N ARG B 354 O LEU B 374 SSBOND 1 CYS A 96 CYS A 125 1555 1555 2.03 SSBOND 2 CYS A 138 CYS A 235 1555 1555 2.03 SSBOND 3 CYS A 367 CYS A 397 1555 1555 2.03 SSBOND 4 CYS B 96 CYS B 125 1555 1555 2.03 SSBOND 5 CYS B 138 CYS B 235 1555 1555 2.03 SSBOND 6 CYS B 367 CYS B 397 1555 1555 2.03 LINK ND2 ASN A 127 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 219 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN B 127 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 219 C1 NAG F 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 CISPEP 1 HIS A 376 SER A 377 0 2.63 CISPEP 2 HIS B 376 SER B 377 0 2.79 CRYST1 82.375 76.405 128.019 90.00 102.58 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012140 0.000000 0.002709 0.00000 SCALE2 0.000000 0.013088 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008003 0.00000