HEADER HYDROLASE 30-MAY-23 8SZQ TITLE CAT DHX9 BOUND TO ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA HELICASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 151-1151; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FELIS CATUS; SOURCE 3 ORGANISM_COMMON: DOMESTIC CAT; SOURCE 4 ORGANISM_TAXID: 9685; SOURCE 5 GENE: DHX9; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS DEXH-BOX, ADP, RHA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.-T.LEE,E.A.SICKMIER,S.GRIGORIU,P.A.BORIACK-SJODIN REVDAT 3 08-NOV-23 8SZQ 1 JRNL REVDAT 2 01-NOV-23 8SZQ 1 JRNL REVDAT 1 02-AUG-23 8SZQ 0 JRNL AUTH Y.T.LEE,E.A.SICKMIER,S.GRIGORIU,J.CASTRO,P.A.BORIACK-SJODIN JRNL TITL CRYSTAL STRUCTURES OF THE DEXH-BOX RNA HELICASE DHX9. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 79 980 2023 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 37860960 JRNL DOI 10.1107/S2059798323007611 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 36690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.966 REMARK 3 FREE R VALUE TEST SET COUNT : 1822 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2461 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6831 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.81400 REMARK 3 B22 (A**2) : 1.81400 REMARK 3 B33 (A**2) : -3.62700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.632 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.269 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.515 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7062 ; 0.002 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6738 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9583 ; 0.708 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15523 ; 0.252 ; 1.563 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 858 ; 5.384 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 47 ; 2.019 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1215 ;11.971 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1093 ; 0.036 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8146 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1575 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1449 ; 0.178 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 46 ; 0.127 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3461 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3441 ; 2.043 ; 7.127 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3441 ; 2.042 ; 7.127 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4296 ; 3.564 ;12.813 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4297 ; 3.564 ;12.815 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3621 ; 1.891 ; 7.485 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3622 ; 1.891 ; 7.485 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5287 ; 3.364 ;13.684 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5288 ; 3.363 ;13.684 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8SZQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95364 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 48.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 26.10 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 25.50 REMARK 200 R MERGE FOR SHELL (I) : 1.51900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M AMMONIUM SULFATE, 0.1 M TRIS PH REMARK 280 8, 19% (W/V) PEG 4000; 5 MM ADP AND 50 MM MAGNESIUM CHLORIDE IN REMARK 280 PROTEIN SOLUTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 174.42500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.00500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.00500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 261.63750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.00500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.00500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.21250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.00500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.00500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 261.63750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.00500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.00500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.21250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 174.42500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 150 REMARK 465 SER A 151 REMARK 465 ARG A 152 REMARK 465 LYS A 153 REMARK 465 GLU A 154 REMARK 465 GLU A 155 REMARK 465 GLN A 156 REMARK 465 GLU A 157 REMARK 465 VAL A 158 REMARK 465 GLN A 159 REMARK 465 ALA A 160 REMARK 465 THR A 161 REMARK 465 LEU A 162 REMARK 465 GLU A 163 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 GLU A 166 REMARK 465 VAL A 167 REMARK 465 ASP A 168 REMARK 465 LEU A 169 REMARK 465 ASN A 170 REMARK 465 ALA A 171 REMARK 465 GLY A 172 REMARK 465 LEU A 173 REMARK 465 HIS A 174 REMARK 465 GLY A 175 REMARK 465 ASN A 176 REMARK 465 TRP A 177 REMARK 465 THR A 178 REMARK 465 LEU A 179 REMARK 465 GLU A 180 REMARK 465 ASN A 181 REMARK 465 ALA A 182 REMARK 465 LYS A 183 REMARK 465 ALA A 184 REMARK 465 ARG A 185 REMARK 465 LEU A 186 REMARK 465 ASN A 187 REMARK 465 GLN A 188 REMARK 465 TYR A 189 REMARK 465 PHE A 190 REMARK 465 GLN A 191 REMARK 465 LYS A 192 REMARK 465 GLU A 193 REMARK 465 LYS A 194 REMARK 465 ILE A 195 REMARK 465 GLN A 196 REMARK 465 GLY A 197 REMARK 465 GLU A 198 REMARK 465 TYR A 199 REMARK 465 LYS A 200 REMARK 465 TYR A 201 REMARK 465 THR A 202 REMARK 465 GLN A 203 REMARK 465 VAL A 204 REMARK 465 GLY A 205 REMARK 465 PRO A 206 REMARK 465 ASP A 207 REMARK 465 HIS A 208 REMARK 465 ASN A 209 REMARK 465 ARG A 210 REMARK 465 SER A 211 REMARK 465 PHE A 212 REMARK 465 ILE A 213 REMARK 465 ALA A 214 REMARK 465 GLU A 215 REMARK 465 MET A 216 REMARK 465 THR A 217 REMARK 465 ILE A 218 REMARK 465 TYR A 219 REMARK 465 ILE A 220 REMARK 465 LYS A 221 REMARK 465 GLN A 222 REMARK 465 LEU A 223 REMARK 465 GLY A 224 REMARK 465 ARG A 225 REMARK 465 ARG A 226 REMARK 465 ILE A 227 REMARK 465 PHE A 228 REMARK 465 ALA A 229 REMARK 465 ARG A 230 REMARK 465 GLU A 231 REMARK 465 HIS A 232 REMARK 465 GLY A 233 REMARK 465 SER A 234 REMARK 465 ASN A 235 REMARK 465 LYS A 236 REMARK 465 LYS A 237 REMARK 465 LEU A 238 REMARK 465 ALA A 239 REMARK 465 ALA A 240 REMARK 465 GLN A 241 REMARK 465 SER A 242 REMARK 465 CYS A 243 REMARK 465 ALA A 244 REMARK 465 LEU A 245 REMARK 465 SER A 246 REMARK 465 LEU A 247 REMARK 465 VAL A 248 REMARK 465 ARG A 249 REMARK 465 GLN A 250 REMARK 465 LEU A 251 REMARK 465 TYR A 252 REMARK 465 HIS A 253 REMARK 465 LEU A 254 REMARK 465 GLY A 255 REMARK 465 VAL A 256 REMARK 465 ILE A 257 REMARK 465 GLU A 258 REMARK 465 ALA A 259 REMARK 465 TYR A 260 REMARK 465 SER A 261 REMARK 465 GLY A 262 REMARK 465 LEU A 263 REMARK 465 THR A 264 REMARK 465 LYS A 265 REMARK 465 LYS A 266 REMARK 465 LYS A 267 REMARK 465 GLU A 268 REMARK 465 GLY A 269 REMARK 465 LYS A 315 REMARK 465 LEU A 316 REMARK 465 ALA A 317 REMARK 465 HIS A 318 REMARK 465 PHE A 319 REMARK 465 GLU A 320 REMARK 465 PRO A 321 REMARK 465 LYS A 590 REMARK 465 ASP A 591 REMARK 465 LYS A 592 REMARK 465 LYS A 593 REMARK 465 LYS A 594 REMARK 465 LYS A 595 REMARK 465 GLU A 596 REMARK 465 LYS A 597 REMARK 465 ASP A 598 REMARK 465 ASP A 599 REMARK 465 ASP A 600 REMARK 465 GLY A 601 REMARK 465 PHE A 602 REMARK 465 GLU A 603 REMARK 465 ASP A 604 REMARK 465 ASP A 605 REMARK 465 LYS A 1154 REMARK 465 ASP A 1155 REMARK 465 ASP A 1156 REMARK 465 ASP A 1157 REMARK 465 ASP A 1158 REMARK 465 LYS A 1159 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3B ADP A 1301 O HOH A 1401 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 326 -162.80 -101.47 REMARK 500 GLN A 327 -61.55 -141.55 REMARK 500 ASP A 349 -58.00 -125.27 REMARK 500 ARG A 435 44.14 -143.18 REMARK 500 LYS A 468 -89.66 -99.01 REMARK 500 PHE A 556 52.60 -99.70 REMARK 500 PHE A 677 57.58 -92.45 REMARK 500 GLN A 690 50.39 -101.81 REMARK 500 CYS A 733 31.92 70.74 REMARK 500 LEU A 777 40.86 -102.24 REMARK 500 ARG A 796 33.94 -143.87 REMARK 500 PRO A1002 41.86 -96.13 REMARK 500 LYS A1008 -70.37 -103.66 REMARK 500 LYS A1010 -112.23 47.85 REMARK 500 SER A1033 -116.25 -154.42 REMARK 500 THR A1052 -112.15 -133.88 REMARK 500 TRP A1088 -30.30 -149.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 419 OG1 REMARK 620 2 GLU A 513 OE2 96.8 REMARK 620 3 ADP A1301 O3B 85.1 167.9 REMARK 620 4 HOH A1401 O 82.7 103.5 64.8 REMARK 620 5 HOH A1409 O 107.2 79.1 111.8 169.6 REMARK 620 6 HOH A1410 O 162.6 95.3 80.5 82.4 87.3 REMARK 620 N 1 2 3 4 5 DBREF1 8SZQ A 151 1151 UNP A0A337SGK2_FELCA DBREF2 8SZQ A A0A337SGK2 151 1151 SEQADV 8SZQ MET A 150 UNP A0A337SGK INITIATING METHIONINE SEQADV 8SZQ ASP A 1152 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ TYR A 1153 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ LYS A 1154 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ ASP A 1155 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ ASP A 1156 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ ASP A 1157 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ ASP A 1158 UNP A0A337SGK EXPRESSION TAG SEQADV 8SZQ LYS A 1159 UNP A0A337SGK EXPRESSION TAG SEQRES 1 A 1010 MET SER ARG LYS GLU GLU GLN GLU VAL GLN ALA THR LEU SEQRES 2 A 1010 GLU SER GLU GLU VAL ASP LEU ASN ALA GLY LEU HIS GLY SEQRES 3 A 1010 ASN TRP THR LEU GLU ASN ALA LYS ALA ARG LEU ASN GLN SEQRES 4 A 1010 TYR PHE GLN LYS GLU LYS ILE GLN GLY GLU TYR LYS TYR SEQRES 5 A 1010 THR GLN VAL GLY PRO ASP HIS ASN ARG SER PHE ILE ALA SEQRES 6 A 1010 GLU MET THR ILE TYR ILE LYS GLN LEU GLY ARG ARG ILE SEQRES 7 A 1010 PHE ALA ARG GLU HIS GLY SER ASN LYS LYS LEU ALA ALA SEQRES 8 A 1010 GLN SER CYS ALA LEU SER LEU VAL ARG GLN LEU TYR HIS SEQRES 9 A 1010 LEU GLY VAL ILE GLU ALA TYR SER GLY LEU THR LYS LYS SEQRES 10 A 1010 LYS GLU GLY GLU THR VAL GLU PRO TYR LYS VAL ASN LEU SEQRES 11 A 1010 SER GLN ASP LEU GLU HIS GLN LEU GLN ASN VAL ILE GLN SEQRES 12 A 1010 GLU LEU ASN LEU GLU ILE VAL PRO PRO PRO GLU ASP PRO SEQRES 13 A 1010 PHE LEU PRO VAL VAL LEU ASN LEU GLY LYS LEU ALA HIS SEQRES 14 A 1010 PHE GLU PRO SER GLN ARG GLN ASN GLN ILE GLY VAL VAL SEQRES 15 A 1010 PRO TRP SER PRO PRO GLN SER ASN TRP ASN PRO TRP THR SEQRES 16 A 1010 SER SER ASN ILE ASP GLU GLY PRO LEU ALA TYR ALA THR SEQRES 17 A 1010 PRO GLU GLN ILE SER MET ASP LEU LYS ASN GLU LEU MET SEQRES 18 A 1010 TYR GLN LEU GLU GLN ASP HIS ASP LEU GLN ALA ILE LEU SEQRES 19 A 1010 GLN GLU ARG GLU LEU LEU PRO VAL LYS LYS PHE GLU SER SEQRES 20 A 1010 GLU ILE LEU GLU ALA ILE SER GLN ASN SER VAL ILE ILE SEQRES 21 A 1010 ILE ARG GLY ALA THR GLY CYS GLY LYS THR THR GLN VAL SEQRES 22 A 1010 PRO GLN PHE ILE LEU ASP ASP PHE ILE GLN ASN ASP ARG SEQRES 23 A 1010 ALA ALA GLU CYS ASN ILE VAL VAL THR GLN PRO ARG ARG SEQRES 24 A 1010 ILE SER ALA VAL SER VAL ALA GLU ARG VAL ALA TYR GLU SEQRES 25 A 1010 ARG GLY GLU GLU PRO GLY LYS SER CYS GLY TYR SER VAL SEQRES 26 A 1010 ARG PHE GLU SER VAL LEU PRO ARG PRO HIS ALA SER ILE SEQRES 27 A 1010 MET PHE CYS THR VAL GLY VAL LEU LEU ARG LYS LEU GLU SEQRES 28 A 1010 ALA GLY ILE ARG GLY ILE SER HIS VAL ILE VAL ASP GLU SEQRES 29 A 1010 ILE HIS GLU ARG ASP ILE ASN THR ASP PHE LEU LEU VAL SEQRES 30 A 1010 VAL LEU ARG ASP VAL VAL GLN ALA TYR PRO GLU VAL ARG SEQRES 31 A 1010 ILE VAL LEU MET SER ALA THR ILE ASP THR SER MET PHE SEQRES 32 A 1010 CYS GLU TYR PHE PHE ASN CYS PRO ILE ILE GLU VAL TYR SEQRES 33 A 1010 GLY ARG THR TYR PRO VAL GLN GLU TYR PHE LEU GLU ASP SEQRES 34 A 1010 CYS ILE GLN MET THR HIS PHE VAL PRO PRO PRO LYS ASP SEQRES 35 A 1010 LYS LYS LYS LYS GLU LYS ASP ASP ASP GLY PHE GLU ASP SEQRES 36 A 1010 ASP ASP ALA ASN CYS ASN LEU ILE CYS GLY ASP GLU TYR SEQRES 37 A 1010 GLY PRO GLU THR ARG MET SER MET ALA GLN LEU ASN GLU SEQRES 38 A 1010 LYS GLU THR PRO PHE GLU LEU ILE GLU ALA LEU LEU LYS SEQRES 39 A 1010 TYR ILE GLU THR LEU ASN VAL PRO GLY ALA VAL LEU VAL SEQRES 40 A 1010 PHE LEU PRO GLY TRP ASN LEU ILE TYR THR MET GLN LYS SEQRES 41 A 1010 HIS LEU GLU MET ASN PRO HIS PHE GLY SER HIS ARG TYR SEQRES 42 A 1010 GLN ILE LEU PRO LEU HIS SER GLN ILE PRO ARG GLU GLU SEQRES 43 A 1010 GLN ARG LYS VAL PHE ASP PRO VAL PRO SER GLY VAL THR SEQRES 44 A 1010 LYS VAL ILE LEU SER THR ASN ILE ALA GLU THR SER ILE SEQRES 45 A 1010 THR ILE ASN ASP VAL VAL TYR VAL ILE ASP SER CYS LYS SEQRES 46 A 1010 GLN LYS VAL LYS LEU PHE THR ALA HIS ASN ASN MET THR SEQRES 47 A 1010 ASN TYR ALA THR VAL TRP ALA SER LYS THR ASN LEU GLU SEQRES 48 A 1010 GLN ARG LYS GLY ARG ALA GLY ARG VAL ARG PRO GLY PHE SEQRES 49 A 1010 CYS PHE HIS LEU CYS SER ARG ALA ARG PHE GLU ARG LEU SEQRES 50 A 1010 GLU THR HIS MET THR PRO GLU MET PHE ARG THR PRO LEU SEQRES 51 A 1010 HIS GLU ILE ALA LEU SER ILE LYS LEU LEU ARG LEU GLY SEQRES 52 A 1010 GLY ILE GLY GLN PHE LEU ALA LYS ALA ILE GLU PRO PRO SEQRES 53 A 1010 PRO LEU ASP ALA VAL ILE GLU ALA GLU HIS THR LEU ARG SEQRES 54 A 1010 GLU LEU ASP ALA LEU ASP ALA ASN ASP GLU LEU THR PRO SEQRES 55 A 1010 LEU GLY ARG ILE LEU ALA LYS LEU PRO ILE GLU PRO ARG SEQRES 56 A 1010 PHE GLY LYS MET MET ILE MET GLY CYS ILE PHE TYR VAL SEQRES 57 A 1010 GLY ASP ALA VAL CYS THR ILE SER ALA ALA THR CYS PHE SEQRES 58 A 1010 PRO GLU PRO PHE ILE SER GLU GLY LYS ARG LEU GLY TYR SEQRES 59 A 1010 VAL HIS ARG ASN PHE ALA GLY ASN ARG PHE SER ASP HIS SEQRES 60 A 1010 VAL ALA LEU LEU SER VAL PHE GLN ALA TRP ASP ASP ALA SEQRES 61 A 1010 ARG MET GLY GLY GLU GLU ALA GLU ILE ARG PHE CYS GLU SEQRES 62 A 1010 HIS LYS ARG LEU ASN MET ALA THR LEU ARG MET THR TRP SEQRES 63 A 1010 GLU ALA LYS VAL GLN LEU LYS GLU ILE LEU ILE ASN SER SEQRES 64 A 1010 GLY PHE PRO GLU ASP CYS LEU LEU THR GLN VAL PHE THR SEQRES 65 A 1010 ASN THR GLY PRO ASP ASN ASN LEU ASP VAL VAL ILE SER SEQRES 66 A 1010 LEU LEU ALA PHE GLY VAL TYR PRO ASN VAL CYS TYR HIS SEQRES 67 A 1010 LYS GLU LYS ARG LYS ILE LEU THR THR GLU GLY ARG ASN SEQRES 68 A 1010 ALA LEU ILE HIS LYS SER SER VAL ASN CYS PRO PHE SER SEQRES 69 A 1010 SER GLN ASP MET LYS TYR PRO SER PRO PHE PHE VAL PHE SEQRES 70 A 1010 GLY GLU LYS ILE ARG THR ARG ALA ILE SER ALA LYS GLY SEQRES 71 A 1010 MET THR LEU VAL THR PRO LEU GLN LEU LEU LEU PHE ALA SEQRES 72 A 1010 SER LYS LYS VAL GLN SER ASP GLY GLN ILE VAL LEU VAL SEQRES 73 A 1010 ASP ASP TRP ILE ARG LEU GLN ILE SER HIS GLU ALA ALA SEQRES 74 A 1010 ALA CYS ILE THR ALA LEU ARG ALA ALA MET GLU ALA LEU SEQRES 75 A 1010 VAL VAL GLU VAL THR LYS GLN PRO ASN ILE ILE SER GLN SEQRES 76 A 1010 LEU ASP PRO VAL ASN GLU HIS MET LEU ASN MET ILE ARG SEQRES 77 A 1010 GLN ILE SER ARG PRO SER ALA ALA GLY ILE ASN LEU MET SEQRES 78 A 1010 ILE ASP TYR LYS ASP ASP ASP ASP LYS HET ADP A1301 27 HET MG A1302 1 HET SO4 A1303 5 HET SO4 A1304 5 HET SO4 A1305 5 HET SO4 A1306 5 HET SO4 A1307 5 HET SO4 A1308 5 HET SO4 A1309 5 HET SO4 A1310 5 HET EDO A1311 4 HET EDO A1312 4 HET EDO A1313 4 HET EDO A1314 4 HET EDO A1315 4 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG MG 2+ FORMUL 4 SO4 8(O4 S 2-) FORMUL 12 EDO 5(C2 H6 O2) FORMUL 17 HOH *94(H2 O) HELIX 1 AA1 SER A 280 ASN A 295 1 16 HELIX 2 AA2 THR A 357 ASP A 376 1 20 HELIX 3 AA3 ASP A 376 GLU A 387 1 12 HELIX 4 AA4 LEU A 388 LYS A 393 5 6 HELIX 5 AA5 PHE A 394 ASN A 405 1 12 HELIX 6 AA6 GLY A 417 ASN A 433 1 17 HELIX 7 AA7 ARG A 435 GLU A 438 5 4 HELIX 8 AA8 ARG A 447 ARG A 462 1 16 HELIX 9 AA9 VAL A 492 LEU A 499 1 8 HELIX 10 AB1 ILE A 514 ARG A 517 5 4 HELIX 11 AB2 ASP A 518 TYR A 535 1 18 HELIX 12 AB3 THR A 549 PHE A 556 1 8 HELIX 13 AB4 PHE A 575 HIS A 584 1 10 HELIX 14 AB5 GLY A 618 ALA A 626 1 9 HELIX 15 AB6 PRO A 634 GLU A 646 1 13 HELIX 16 AB7 GLY A 660 ASN A 674 1 15 HELIX 17 AB8 PRO A 675 GLY A 678 5 4 HELIX 18 AB9 PRO A 692 ARG A 697 1 6 HELIX 19 AC1 LYS A 698 PHE A 700 5 3 HELIX 20 AC2 ASN A 715 SER A 720 1 6 HELIX 21 AC3 SER A 755 ARG A 765 1 11 HELIX 22 AC4 SER A 779 ARG A 785 1 7 HELIX 23 AC5 PRO A 792 ARG A 796 5 5 HELIX 24 AC6 LEU A 799 LEU A 809 1 11 HELIX 25 AC7 GLY A 813 ALA A 819 1 7 HELIX 26 AC8 PRO A 826 LEU A 840 1 15 HELIX 27 AC9 THR A 850 LEU A 859 1 10 HELIX 28 AD1 GLU A 862 PHE A 875 1 14 HELIX 29 AD2 VAL A 877 THR A 888 1 12 HELIX 30 AD3 GLY A 902 PHE A 908 1 7 HELIX 31 AD4 SER A 914 ARG A 930 1 17 HELIX 32 AD5 GLY A 933 LYS A 944 1 12 HELIX 33 AD6 ASN A 947 GLY A 969 1 23 HELIX 34 AD7 PRO A 971 LEU A 975 5 5 HELIX 35 AD8 ASP A 986 TYR A 1001 1 16 HELIX 36 AD9 THR A 1064 ALA A 1072 1 9 HELIX 37 AE1 SER A 1094 GLN A 1118 1 25 HELIX 38 AE2 PRO A 1119 SER A 1123 5 5 HELIX 39 AE3 ASP A 1126 SER A 1140 1 15 HELIX 40 AE4 ARG A 1141 GLY A 1146 5 6 SHEET 1 AA1 5 TYR A 275 LYS A 276 0 SHEET 2 AA1 5 ILE A1089 GLN A1092 1 O GLN A1092 N TYR A 275 SHEET 3 AA1 5 ILE A1082 VAL A1085 -1 N VAL A1085 O ILE A1089 SHEET 4 AA1 5 VAL A1076 SER A1078 -1 N GLN A1077 O LEU A1084 SHEET 5 AA1 5 VAL A 309 VAL A 310 -1 N VAL A 309 O SER A1078 SHEET 1 AA2 2 TRP A 333 SER A 334 0 SHEET 2 AA2 2 ILE A 503 ARG A 504 1 O ILE A 503 N SER A 334 SHEET 1 AA3 2 TRP A 340 ASN A 341 0 SHEET 2 AA3 2 SER A 346 ASN A 347 -1 O SER A 346 N ASN A 341 SHEET 1 AA4 8 GLU A 477 VAL A 479 0 SHEET 2 AA4 8 CYS A 470 VAL A 474 -1 N VAL A 474 O GLU A 477 SHEET 3 AA4 8 SER A 486 THR A 491 1 O PHE A 489 N GLY A 471 SHEET 4 AA4 8 ASN A 440 GLN A 445 1 N VAL A 443 O MET A 488 SHEET 5 AA4 8 HIS A 508 ASP A 512 1 O ILE A 510 N VAL A 442 SHEET 6 AA4 8 ARG A 539 SER A 544 1 O ARG A 539 N VAL A 509 SHEET 7 AA4 8 VAL A 407 GLY A 412 1 N ILE A 410 O LEU A 542 SHEET 8 AA4 8 ILE A 561 VAL A 564 1 O ILE A 562 N ILE A 409 SHEET 1 AA5 6 VAL A 571 TYR A 574 0 SHEET 2 AA5 6 GLY A 772 HIS A 776 1 O HIS A 776 N TYR A 574 SHEET 3 AA5 6 VAL A 726 ASP A 731 1 N VAL A 729 O PHE A 775 SHEET 4 AA5 6 ALA A 653 PHE A 657 1 N LEU A 655 O TYR A 728 SHEET 5 AA5 6 THR A 708 SER A 713 1 O ILE A 711 N VAL A 656 SHEET 6 AA5 6 TYR A 682 LEU A 687 1 N LEU A 685 O VAL A 710 SHEET 1 AA6 2 LYS A 734 THR A 741 0 SHEET 2 AA6 2 MET A 746 TRP A 753 -1 O ASN A 748 N LEU A 739 SHEET 1 AA7 6 VAL A1004 GLU A1009 0 SHEET 2 AA7 6 LYS A1012 LEU A1014 -1 O LEU A1014 N TYR A1006 SHEET 3 AA7 6 ASN A1020 ILE A1023 -1 O ALA A1021 N ILE A1013 SHEET 4 AA7 6 ILE A1055 LEU A1062 1 O ILE A1055 N LEU A1022 SHEET 5 AA7 6 PHE A1043 ARG A1051 -1 N VAL A1045 O THR A1061 SHEET 6 AA7 6 VAL A1004 GLU A1009 -1 N CYS A1005 O PHE A1044 LINK OG1 THR A 419 MG MG A1302 1555 1555 1.99 LINK OE2 GLU A 513 MG MG A1302 1555 1555 2.00 LINK O3B ADP A1301 MG MG A1302 1555 1555 2.00 LINK MG MG A1302 O HOH A1401 1555 1555 1.99 LINK MG MG A1302 O HOH A1409 1555 1555 1.99 LINK MG MG A1302 O HOH A1410 1555 1555 1.99 CISPEP 1 TYR A 1001 PRO A 1002 0 6.08 CRYST1 86.010 86.010 348.850 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011627 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002867 0.00000