HEADER OXIDOREDUCTASE/INHIBITOR 29-JUN-23 8TBR TITLE CRYSTAL STRUCTURE OF DIHYDROFOLATE REDUCTASE (DHFR) FROM MYCOBACTERIUM TITLE 2 ULCERANS AGY99 IN COMPLEX WITH NADP AND INHIBITOR MAM758 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MYULA.01062.A.B13; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM ULCERANS; SOURCE 3 ORGANISM_TAXID: 362242; SOURCE 4 STRAIN: AGY99; SOURCE 5 GENE: DFRA, MUL_2179; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MYULA.01062.A.B13 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, DIHYDROFOLATE REDUCTASE, OXIDOREDUCTASE- KEYWDS 3 OXIDOREDUCTASE INHIBITOR COMPLEX, OXIDOREDUCTASE, OXIDOREDUCTASE- KEYWDS 4 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 06-NOV-24 8TBR 1 JRNL REVDAT 1 28-AUG-24 8TBR 0 JRNL AUTH M.ANDRADE MEIRELLES,V.M.ALMEIDA,J.R.SULLIVAN,I.DE TOLEDO, JRNL AUTH 2 C.V.DOS REIS,M.R.CUNHA,R.ZIGWEID,A.SHIM,B.SANKARAN, JRNL AUTH 3 E.L.WOODWARD,S.SEIBOLD,L.LIU,M.R.MIAN,K.P.BATTAILE,J.RILEY, JRNL AUTH 4 C.DUNCAN,F.R.C.SIMEONS,L.FERGUSON,H.JOJI,K.D.READ,S.LOVELL, JRNL AUTH 5 B.L.STAKER,M.A.BEHR,R.A.PILLI,R.M.COUNAGO JRNL TITL RATIONAL EXPLORATION OF 2,4-DIAMINOPYRIMIDINES AS DHFR JRNL TITL 2 INHIBITORS ACTIVE AGAINST MYCOBACTERIUM ABSCESSUS AND JRNL TITL 3 MYCOBACTERIUM AVIUM , TWO EMERGING HUMAN PATHOGENS. JRNL REF J.MED.CHEM. 2024 JRNL REFN ISSN 0022-2623 JRNL PMID 39468773 JRNL DOI 10.1021/ACS.JMEDCHEM.4C01594 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21RC1_4933 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 16573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.2000 - 3.1800 1.00 2648 153 0.1372 0.1669 REMARK 3 2 3.1800 - 2.5200 1.00 2680 106 0.1494 0.2104 REMARK 3 3 2.5200 - 2.2000 1.00 2610 131 0.1529 0.2150 REMARK 3 4 2.2000 - 2.0000 1.00 2629 133 0.1678 0.1862 REMARK 3 5 2.0000 - 1.8600 1.00 2613 151 0.1978 0.2670 REMARK 3 6 1.8600 - 1.7500 0.99 2605 114 0.2570 0.2998 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1428 REMARK 3 ANGLE : 1.067 1972 REMARK 3 CHIRALITY : 0.055 214 REMARK 3 PLANARITY : 0.014 252 REMARK 3 DIHEDRAL : 13.463 537 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2178 -6.5953 16.5709 REMARK 3 T TENSOR REMARK 3 T11: 0.0830 T22: 0.0899 REMARK 3 T33: 0.1091 T12: -0.0053 REMARK 3 T13: 0.0018 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 2.0497 L22: 2.5665 REMARK 3 L33: 2.6650 L12: 0.0155 REMARK 3 L13: -0.2818 L23: 0.1686 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: -0.2707 S13: 0.1941 REMARK 3 S21: 0.1697 S22: 0.0263 S23: -0.0671 REMARK 3 S31: -0.3284 S32: 0.1199 S33: 0.0826 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0038 -5.9435 13.5228 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.2020 REMARK 3 T33: 0.1228 T12: 0.0460 REMARK 3 T13: -0.0206 T23: -0.0706 REMARK 3 L TENSOR REMARK 3 L11: 1.0384 L22: 1.9981 REMARK 3 L33: 3.3465 L12: -0.4288 REMARK 3 L13: -1.0815 L23: 2.1763 REMARK 3 S TENSOR REMARK 3 S11: -0.1192 S12: -0.4510 S13: 0.2160 REMARK 3 S21: -0.0872 S22: -0.2395 S23: 0.2728 REMARK 3 S31: -0.5836 S32: -0.6452 S33: -0.1194 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1933 -18.6817 12.9250 REMARK 3 T TENSOR REMARK 3 T11: 0.0820 T22: 0.0929 REMARK 3 T33: 0.1037 T12: -0.0066 REMARK 3 T13: 0.0269 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.2497 L22: 2.4695 REMARK 3 L33: 2.7711 L12: -0.9491 REMARK 3 L13: -0.0418 L23: -0.3057 REMARK 3 S TENSOR REMARK 3 S11: -0.0834 S12: -0.1328 S13: -0.1082 REMARK 3 S21: 0.1721 S22: 0.0442 S23: 0.1622 REMARK 3 S31: 0.0648 S32: -0.1291 S33: 0.0555 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7595 -26.8570 8.8617 REMARK 3 T TENSOR REMARK 3 T11: 0.1283 T22: 0.0985 REMARK 3 T33: 0.1417 T12: -0.0089 REMARK 3 T13: 0.0329 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 3.1507 L22: 2.9418 REMARK 3 L33: 2.4310 L12: -0.5195 REMARK 3 L13: -0.1270 L23: -0.4195 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.0202 S13: -0.1120 REMARK 3 S21: -0.0172 S22: -0.0400 S23: -0.1595 REMARK 3 S31: 0.1726 S32: 0.0055 S33: 0.0768 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2985 -19.0097 0.5601 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.1212 REMARK 3 T33: 0.1277 T12: -0.0154 REMARK 3 T13: 0.0019 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.7053 L22: 3.7969 REMARK 3 L33: 2.8556 L12: -0.4527 REMARK 3 L13: -0.0932 L23: 0.4060 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: 0.1030 S13: -0.0258 REMARK 3 S21: -0.5395 S22: 0.0366 S23: 0.0844 REMARK 3 S31: 0.0486 S32: -0.0725 S33: 0.0578 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2956 -6.0439 7.0948 REMARK 3 T TENSOR REMARK 3 T11: 0.1030 T22: 0.0874 REMARK 3 T33: 0.1055 T12: -0.0152 REMARK 3 T13: -0.0092 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.9197 L22: 2.1246 REMARK 3 L33: 1.8595 L12: -0.7859 REMARK 3 L13: 0.0322 L23: -0.1007 REMARK 3 S TENSOR REMARK 3 S11: -0.0575 S12: 0.1294 S13: 0.0823 REMARK 3 S21: 0.0249 S22: -0.1260 S23: -0.1748 REMARK 3 S31: -0.3524 S32: 0.1054 S33: -0.0310 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7445 -6.2712 22.7711 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.3005 REMARK 3 T33: 0.2035 T12: -0.0014 REMARK 3 T13: -0.0067 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 2.4814 L22: 1.2712 REMARK 3 L33: 2.2141 L12: -0.5936 REMARK 3 L13: -0.0464 L23: 0.6864 REMARK 3 S TENSOR REMARK 3 S11: -0.1409 S12: -0.7038 S13: 0.3138 REMARK 3 S21: 0.1830 S22: 0.3556 S23: -0.5063 REMARK 3 S31: -0.0839 S32: 0.3033 S33: -0.0088 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5326 0.1542 3.4262 REMARK 3 T TENSOR REMARK 3 T11: 0.1565 T22: 0.1554 REMARK 3 T33: 0.1271 T12: -0.0292 REMARK 3 T13: 0.0430 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.2062 L22: 1.4876 REMARK 3 L33: 2.1743 L12: 0.0206 REMARK 3 L13: 0.0629 L23: -0.5522 REMARK 3 S TENSOR REMARK 3 S11: 0.0834 S12: 0.0592 S13: 0.1173 REMARK 3 S21: 0.0773 S22: -0.0688 S23: -0.2141 REMARK 3 S31: -0.5274 S32: 0.3285 S33: 0.0898 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9202 3.7461 12.6820 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.1150 REMARK 3 T33: 0.1420 T12: 0.0613 REMARK 3 T13: -0.0160 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.5303 L22: 1.6613 REMARK 3 L33: 4.2642 L12: -0.1775 REMARK 3 L13: -1.3069 L23: 0.5616 REMARK 3 S TENSOR REMARK 3 S11: 0.0700 S12: 0.0838 S13: 0.1125 REMARK 3 S21: 0.2432 S22: -0.0558 S23: -0.1269 REMARK 3 S31: -0.5746 S32: -0.4465 S33: 0.0486 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8TBR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1000275623. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : HELIOS MULTILAYER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON III REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16609 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 43.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 1.40400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS E4: 12.5%(V/V) MPD, REMARK 280 12.5%(V/V) PEG 1000, 12.5%(W/V) PEG 3350, 100 MM IMIDAZOLE/MES, REMARK 280 PH 6.5, 30 MM DIETHYLENE GLYCOL, 30 MM TRIETHYLENEGLYCOL, 30 MM REMARK 280 TETRAETHYLENE GLYCOL AND 30 MM PENTAETHYLENE GLYCOL. REMARK 280 MYULA.01062.A.B13.PS38720 AT 8.9 MG/ML. 2MM MAM758 AND 2MM NADP REMARK 280 ADDED TO THE PROTEIN PRIOR TO CRYSTALLIZATION. PLATE 13387 WELL REMARK 280 E4 DROP 2, CRYO: DIRECT, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.16600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 23 39.11 -87.63 REMARK 500 REMARK 500 REMARK: NULL DBREF 8TBR A 1 165 UNP A0PQG8 A0PQG8_MYCUA 1 165 SEQADV 8TBR MET A -7 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR ALA A -6 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A -5 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A -4 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A -3 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A -2 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A -1 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR HIS A 0 UNP A0PQG8 EXPRESSION TAG SEQADV 8TBR SER A 89 UNP A0PQG8 CYS 89 ENGINEERED MUTATION SEQADV 8TBR ALA A 96 UNP A0PQG8 GLU 96 ENGINEERED MUTATION SEQRES 1 A 173 MET ALA HIS HIS HIS HIS HIS HIS MET THR SER VAL GLY SEQRES 2 A 173 LEU ILE TRP ALA GLN SER THR SER GLY VAL ILE GLY ARG SEQRES 3 A 173 ASP GLY GLY ILE PRO TRP ARG LEU PRO GLU ASP LEU ALA SEQRES 4 A 173 HIS PHE LYS ARG LEU THR MET GLY HIS THR VAL VAL MET SEQRES 5 A 173 GLY ARG ARG THR TRP ASP SER LEU PRO ALA ALA HIS ARG SEQRES 6 A 173 PRO LEU PRO GLY ARG ARG ASN VAL VAL VAL THR ARG GLN SEQRES 7 A 173 THR GLY LEU VAL ALA HIS GLY ALA GLN VAL VAL GLY SER SEQRES 8 A 173 LEU GLU GLN ALA LEU SER PRO ALA GLU PRO ASP ALA ALA SEQRES 9 A 173 THR TRP VAL ILE GLY GLY ALA GLN ILE TYR ALA LEU ALA SEQRES 10 A 173 LEU PRO LEU ALA ASN ARG CYS GLU VAL THR GLU VAL ASP SEQRES 11 A 173 VAL ASP LEU PRO PRO GLU ASP GLU ASP ALA LEU ALA PRO SEQRES 12 A 173 VAL LEU ASP GLN THR TRP ALA GLY THR SER GLY GLU TRP SEQRES 13 A 173 LEU VAL SER ARG SER GLY LEU ARG TYR ARG MET HIS SER SEQRES 14 A 173 TYR ARG ARG LEU HET NAP A 201 48 HET HIJ A 202 30 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM HIJ 3-(2-{3-[(2,4-DIAMINO-6-PHENYLPYRIMIDIN-5-YL) HETNAM 2 HIJ OXY]PROPOXY}PHENYL)PROPANOIC ACID HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HIJ C22 H24 N4 O4 FORMUL 4 HOH *154(H2 O) HELIX 1 AA1 LEU A 26 MET A 38 1 13 HELIX 2 AA2 ARG A 46 LEU A 52 1 7 HELIX 3 AA3 PRO A 53 ARG A 57 5 5 HELIX 4 AA4 SER A 83 LEU A 88 1 6 HELIX 5 AA5 GLY A 102 LEU A 110 1 9 HELIX 6 AA6 PRO A 111 ALA A 113 5 3 SHEET 1 AA1 8 GLN A 79 VAL A 81 0 SHEET 2 AA1 8 ARG A 63 VAL A 67 1 N VAL A 66 O GLN A 79 SHEET 3 AA1 8 THR A 41 GLY A 45 1 N VAL A 42 O ARG A 63 SHEET 4 AA1 8 THR A 97 GLY A 101 1 O TRP A 98 N VAL A 43 SHEET 5 AA1 8 VAL A 4 SER A 11 1 N GLY A 5 O VAL A 99 SHEET 6 AA1 8 ARG A 115 ASP A 122 1 O THR A 119 N GLN A 10 SHEET 7 AA1 8 ARG A 156 ARG A 164 -1 O HIS A 160 N VAL A 118 SHEET 8 AA1 8 TRP A 141 SER A 145 -1 N ALA A 142 O ARG A 163 SHEET 1 AA2 8 GLN A 79 VAL A 81 0 SHEET 2 AA2 8 ARG A 63 VAL A 67 1 N VAL A 66 O GLN A 79 SHEET 3 AA2 8 THR A 41 GLY A 45 1 N VAL A 42 O ARG A 63 SHEET 4 AA2 8 THR A 97 GLY A 101 1 O TRP A 98 N VAL A 43 SHEET 5 AA2 8 VAL A 4 SER A 11 1 N GLY A 5 O VAL A 99 SHEET 6 AA2 8 ARG A 115 ASP A 122 1 O THR A 119 N GLN A 10 SHEET 7 AA2 8 ARG A 156 ARG A 164 -1 O HIS A 160 N VAL A 118 SHEET 8 AA2 8 LEU A 149 VAL A 150 -1 N LEU A 149 O TYR A 157 SHEET 1 AA3 2 VAL A 15 GLY A 17 0 SHEET 2 AA3 2 ALA A 132 LEU A 133 -1 O ALA A 132 N ILE A 16 CISPEP 1 ARG A 57 PRO A 58 0 9.42 CISPEP 2 GLY A 101 GLY A 102 0 5.41 CRYST1 28.606 66.332 43.973 90.00 91.16 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034958 0.000000 0.000710 0.00000 SCALE2 0.000000 0.015076 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022746 0.00000