data_8TJE # _entry.id 8TJE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8TJE pdb_00008tje 10.2210/pdb8tje/pdb WWPDB D_1000276077 ? ? EMDB EMD-41301 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Zophobas morio black wasting virus strain OR-molitor virion structure' _pdbx_database_related.db_id EMD-41301 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8TJE _pdbx_database_status.recvd_initial_deposition_date 2023-07-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Penzes, J.J.' 1 ? 'Kaelber, J.T.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Penzes, J.J.' 1 ? primary 'Holm, M.' 2 ? primary 'Firlar, E.' 3 ? primary 'Kaelber, J.T.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8TJE _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8TJE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Major capsid protein' 48114.625 1 ? ? ? ? 2 polymer nat ;DNA (5'-D(P*CP*G)-3') ; 573.430 1 ? ? ? ? 3 polymer nat ;DNA (5'-D(P*CP*AP*GP*GP*CP*CP*AP*AP*A)-3') ; 2733.827 1 ? ? ? ? 4 polymer nat ;DNA (5'-D(P*TP*CP*GP*AP*A)-3') ; 1504.037 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ATAILRPIGLHVEKFQQTYRKKWRFLTSANANVILAEAASGERPARWALTTGMASIPWEYLFFYMSPAEYNRMKNYPGTF AKSASVRIRTWNTRVAFQTGDTQTANATLNQNKFLQVAKGIRSIPFICSTNRKYTYSDTEPMQPTGFATLTSYEYRDGLK TAMYGYDNDNKDFAKKPPADATGAEIYLQDYLTIYTNDARATTGTKILAGFPPYKNFIEEFDASACINTDVVAMDYDFSY APLVPQFAPVPNNLITQNYNGSYPAGTKNEVTAAKTTDSSQATAPTQVRNAPRKYIQGPHADTTFFDEEQNYLRVPIEQG GIFEEVNVETVHDTQMPSINVGIRAVPKLTTIDETTQANSWLDAQGYFEVDCVLTTESVDPYTYIKGGCYSANTKSQLQY FASDGRPIAKVYDNPNVYGRMQMIKTVKP ; ;ATAILRPIGLHVEKFQQTYRKKWRFLTSANANVILAEAASGERPARWALTTGMASIPWEYLFFYMSPAEYNRMKNYPGTF AKSASVRIRTWNTRVAFQTGDTQTANATLNQNKFLQVAKGIRSIPFICSTNRKYTYSDTEPMQPTGFATLTSYEYRDGLK TAMYGYDNDNKDFAKKPPADATGAEIYLQDYLTIYTNDARATTGTKILAGFPPYKNFIEEFDASACINTDVVAMDYDFSY APLVPQFAPVPNNLITQNYNGSYPAGTKNEVTAAKTTDSSQATAPTQVRNAPRKYIQGPHADTTFFDEEQNYLRVPIEQG GIFEEVNVETVHDTQMPSINVGIRAVPKLTTIDETTQANSWLDAQGYFEVDCVLTTESVDPYTYIKGGCYSANTKSQLQY FASDGRPIAKVYDNPNVYGRMQMIKTVKP ; A ? 2 polydeoxyribonucleotide no no '(DC)(DG)' CG B ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DG)(DC)(DC)(DA)(DA)(DA)' CAGGCCAAA C ? 4 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DA)(DA)' TCGAA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 ALA n 1 4 ILE n 1 5 LEU n 1 6 ARG n 1 7 PRO n 1 8 ILE n 1 9 GLY n 1 10 LEU n 1 11 HIS n 1 12 VAL n 1 13 GLU n 1 14 LYS n 1 15 PHE n 1 16 GLN n 1 17 GLN n 1 18 THR n 1 19 TYR n 1 20 ARG n 1 21 LYS n 1 22 LYS n 1 23 TRP n 1 24 ARG n 1 25 PHE n 1 26 LEU n 1 27 THR n 1 28 SER n 1 29 ALA n 1 30 ASN n 1 31 ALA n 1 32 ASN n 1 33 VAL n 1 34 ILE n 1 35 LEU n 1 36 ALA n 1 37 GLU n 1 38 ALA n 1 39 ALA n 1 40 SER n 1 41 GLY n 1 42 GLU n 1 43 ARG n 1 44 PRO n 1 45 ALA n 1 46 ARG n 1 47 TRP n 1 48 ALA n 1 49 LEU n 1 50 THR n 1 51 THR n 1 52 GLY n 1 53 MET n 1 54 ALA n 1 55 SER n 1 56 ILE n 1 57 PRO n 1 58 TRP n 1 59 GLU n 1 60 TYR n 1 61 LEU n 1 62 PHE n 1 63 PHE n 1 64 TYR n 1 65 MET n 1 66 SER n 1 67 PRO n 1 68 ALA n 1 69 GLU n 1 70 TYR n 1 71 ASN n 1 72 ARG n 1 73 MET n 1 74 LYS n 1 75 ASN n 1 76 TYR n 1 77 PRO n 1 78 GLY n 1 79 THR n 1 80 PHE n 1 81 ALA n 1 82 LYS n 1 83 SER n 1 84 ALA n 1 85 SER n 1 86 VAL n 1 87 ARG n 1 88 ILE n 1 89 ARG n 1 90 THR n 1 91 TRP n 1 92 ASN n 1 93 THR n 1 94 ARG n 1 95 VAL n 1 96 ALA n 1 97 PHE n 1 98 GLN n 1 99 THR n 1 100 GLY n 1 101 ASP n 1 102 THR n 1 103 GLN n 1 104 THR n 1 105 ALA n 1 106 ASN n 1 107 ALA n 1 108 THR n 1 109 LEU n 1 110 ASN n 1 111 GLN n 1 112 ASN n 1 113 LYS n 1 114 PHE n 1 115 LEU n 1 116 GLN n 1 117 VAL n 1 118 ALA n 1 119 LYS n 1 120 GLY n 1 121 ILE n 1 122 ARG n 1 123 SER n 1 124 ILE n 1 125 PRO n 1 126 PHE n 1 127 ILE n 1 128 CYS n 1 129 SER n 1 130 THR n 1 131 ASN n 1 132 ARG n 1 133 LYS n 1 134 TYR n 1 135 THR n 1 136 TYR n 1 137 SER n 1 138 ASP n 1 139 THR n 1 140 GLU n 1 141 PRO n 1 142 MET n 1 143 GLN n 1 144 PRO n 1 145 THR n 1 146 GLY n 1 147 PHE n 1 148 ALA n 1 149 THR n 1 150 LEU n 1 151 THR n 1 152 SER n 1 153 TYR n 1 154 GLU n 1 155 TYR n 1 156 ARG n 1 157 ASP n 1 158 GLY n 1 159 LEU n 1 160 LYS n 1 161 THR n 1 162 ALA n 1 163 MET n 1 164 TYR n 1 165 GLY n 1 166 TYR n 1 167 ASP n 1 168 ASN n 1 169 ASP n 1 170 ASN n 1 171 LYS n 1 172 ASP n 1 173 PHE n 1 174 ALA n 1 175 LYS n 1 176 LYS n 1 177 PRO n 1 178 PRO n 1 179 ALA n 1 180 ASP n 1 181 ALA n 1 182 THR n 1 183 GLY n 1 184 ALA n 1 185 GLU n 1 186 ILE n 1 187 TYR n 1 188 LEU n 1 189 GLN n 1 190 ASP n 1 191 TYR n 1 192 LEU n 1 193 THR n 1 194 ILE n 1 195 TYR n 1 196 THR n 1 197 ASN n 1 198 ASP n 1 199 ALA n 1 200 ARG n 1 201 ALA n 1 202 THR n 1 203 THR n 1 204 GLY n 1 205 THR n 1 206 LYS n 1 207 ILE n 1 208 LEU n 1 209 ALA n 1 210 GLY n 1 211 PHE n 1 212 PRO n 1 213 PRO n 1 214 TYR n 1 215 LYS n 1 216 ASN n 1 217 PHE n 1 218 ILE n 1 219 GLU n 1 220 GLU n 1 221 PHE n 1 222 ASP n 1 223 ALA n 1 224 SER n 1 225 ALA n 1 226 CYS n 1 227 ILE n 1 228 ASN n 1 229 THR n 1 230 ASP n 1 231 VAL n 1 232 VAL n 1 233 ALA n 1 234 MET n 1 235 ASP n 1 236 TYR n 1 237 ASP n 1 238 PHE n 1 239 SER n 1 240 TYR n 1 241 ALA n 1 242 PRO n 1 243 LEU n 1 244 VAL n 1 245 PRO n 1 246 GLN n 1 247 PHE n 1 248 ALA n 1 249 PRO n 1 250 VAL n 1 251 PRO n 1 252 ASN n 1 253 ASN n 1 254 LEU n 1 255 ILE n 1 256 THR n 1 257 GLN n 1 258 ASN n 1 259 TYR n 1 260 ASN n 1 261 GLY n 1 262 SER n 1 263 TYR n 1 264 PRO n 1 265 ALA n 1 266 GLY n 1 267 THR n 1 268 LYS n 1 269 ASN n 1 270 GLU n 1 271 VAL n 1 272 THR n 1 273 ALA n 1 274 ALA n 1 275 LYS n 1 276 THR n 1 277 THR n 1 278 ASP n 1 279 SER n 1 280 SER n 1 281 GLN n 1 282 ALA n 1 283 THR n 1 284 ALA n 1 285 PRO n 1 286 THR n 1 287 GLN n 1 288 VAL n 1 289 ARG n 1 290 ASN n 1 291 ALA n 1 292 PRO n 1 293 ARG n 1 294 LYS n 1 295 TYR n 1 296 ILE n 1 297 GLN n 1 298 GLY n 1 299 PRO n 1 300 HIS n 1 301 ALA n 1 302 ASP n 1 303 THR n 1 304 THR n 1 305 PHE n 1 306 PHE n 1 307 ASP n 1 308 GLU n 1 309 GLU n 1 310 GLN n 1 311 ASN n 1 312 TYR n 1 313 LEU n 1 314 ARG n 1 315 VAL n 1 316 PRO n 1 317 ILE n 1 318 GLU n 1 319 GLN n 1 320 GLY n 1 321 GLY n 1 322 ILE n 1 323 PHE n 1 324 GLU n 1 325 GLU n 1 326 VAL n 1 327 ASN n 1 328 VAL n 1 329 GLU n 1 330 THR n 1 331 VAL n 1 332 HIS n 1 333 ASP n 1 334 THR n 1 335 GLN n 1 336 MET n 1 337 PRO n 1 338 SER n 1 339 ILE n 1 340 ASN n 1 341 VAL n 1 342 GLY n 1 343 ILE n 1 344 ARG n 1 345 ALA n 1 346 VAL n 1 347 PRO n 1 348 LYS n 1 349 LEU n 1 350 THR n 1 351 THR n 1 352 ILE n 1 353 ASP n 1 354 GLU n 1 355 THR n 1 356 THR n 1 357 GLN n 1 358 ALA n 1 359 ASN n 1 360 SER n 1 361 TRP n 1 362 LEU n 1 363 ASP n 1 364 ALA n 1 365 GLN n 1 366 GLY n 1 367 TYR n 1 368 PHE n 1 369 GLU n 1 370 VAL n 1 371 ASP n 1 372 CYS n 1 373 VAL n 1 374 LEU n 1 375 THR n 1 376 THR n 1 377 GLU n 1 378 SER n 1 379 VAL n 1 380 ASP n 1 381 PRO n 1 382 TYR n 1 383 THR n 1 384 TYR n 1 385 ILE n 1 386 LYS n 1 387 GLY n 1 388 GLY n 1 389 CYS n 1 390 TYR n 1 391 SER n 1 392 ALA n 1 393 ASN n 1 394 THR n 1 395 LYS n 1 396 SER n 1 397 GLN n 1 398 LEU n 1 399 GLN n 1 400 TYR n 1 401 PHE n 1 402 ALA n 1 403 SER n 1 404 ASP n 1 405 GLY n 1 406 ARG n 1 407 PRO n 1 408 ILE n 1 409 ALA n 1 410 LYS n 1 411 VAL n 1 412 TYR n 1 413 ASP n 1 414 ASN n 1 415 PRO n 1 416 ASN n 1 417 VAL n 1 418 TYR n 1 419 GLY n 1 420 ARG n 1 421 MET n 1 422 GLN n 1 423 MET n 1 424 ILE n 1 425 LYS n 1 426 THR n 1 427 VAL n 1 428 LYS n 1 429 PRO n 2 1 DC n 2 2 DG n 3 1 DC n 3 2 DA n 3 3 DG n 3 4 DG n 3 5 DC n 3 6 DC n 3 7 DA n 3 8 DA n 3 9 DA n 4 1 DT n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DA n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 429 ? 'Tenebrio molitor' 7067 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 2 ? 'Tenebrio molitor' 7067 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 1 9 ? 'Tenebrio molitor' 7067 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 1 5 ? 'Tenebrio molitor' 7067 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8TJE 8TJE ? 1 ? 1 2 PDB 8TJE 8TJE ? 2 ? 1 3 PDB 8TJE 8TJE ? 3 ? 1 4 PDB 8TJE 8TJE ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8TJE A 1 ? 429 ? 8TJE 165 ? 593 ? 165 593 2 2 8TJE B 1 ? 2 ? 8TJE 801 ? 802 ? 801 802 3 3 8TJE C 1 ? 9 ? 8TJE 821 ? 829 ? 821 829 4 4 8TJE D 1 ? 5 ? 8TJE 836 ? 840 ? 836 840 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8TJE _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8TJE _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 208680 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.479 ? 284520 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.195 ? 28500 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.041 ? 31080 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 37260 ? f_plane_restr ? ? # _struct.entry_id 8TJE _struct.title 'Zophobas morio black wasting virus strain OR-molitor virion structure' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8TJE _struct_keywords.text 'Capsid, Virion, Parvovirus, Densovirus, Invertebrate, Insect, Pathogen, ssDNA, VIRUS, VIRUS-DNA complex' _struct_keywords.pdbx_keywords VIRUS/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 60 ? TYR A 64 ? TYR A 224 TYR A 228 5 ? 5 HELX_P HELX_P2 AA2 SER A 66 ? LYS A 74 ? SER A 230 LYS A 238 1 ? 9 HELX_P HELX_P3 AA3 GLY A 120 ? ILE A 124 ? GLY A 284 ILE A 288 5 ? 5 HELX_P HELX_P4 AA4 THR A 151 ? GLY A 165 ? THR A 315 GLY A 329 1 ? 15 HELX_P HELX_P5 AA5 ASN A 170 ? LYS A 175 ? ASN A 334 LYS A 339 5 ? 6 HELX_P HELX_P6 AA6 PRO A 178 ? GLY A 183 ? PRO A 342 GLY A 347 1 ? 6 HELX_P HELX_P7 AA7 PRO A 213 ? ILE A 218 ? PRO A 377 ILE A 382 5 ? 6 HELX_P HELX_P8 AA8 PRO A 251 ? ILE A 255 ? PRO A 415 ILE A 419 5 ? 5 HELX_P HELX_P9 AA9 THR A 256 ? GLY A 261 ? THR A 420 GLY A 425 5 ? 6 HELX_P HELX_P10 AB1 THR A 303 ? GLU A 309 ? THR A 467 GLU A 473 1 ? 7 HELX_P HELX_P11 AB2 ALA A 392 ? LYS A 395 ? ALA A 556 LYS A 559 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 3 ? AA8 ? 2 ? AA9 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 94 ? VAL A 95 ? ARG A 258 VAL A 259 AA1 2 ALA A 364 ? ASP A 380 ? ALA A 528 ASP A 544 AA1 3 GLU A 13 ? SER A 28 ? GLU A 177 SER A 192 AA1 4 GLU A 185 ? LEU A 188 ? GLU A 349 LEU A 352 AA2 1 ARG A 94 ? VAL A 95 ? ARG A 258 VAL A 259 AA2 2 ALA A 364 ? ASP A 380 ? ALA A 528 ASP A 544 AA2 3 PHE A 80 ? THR A 90 ? PHE A 244 THR A 254 AA2 4 THR A 229 ? ASP A 237 ? THR A 393 ASP A 401 AA3 1 ILE A 34 ? GLU A 37 ? ILE A 198 GLU A 201 AA3 2 ARG A 46 ? ILE A 56 ? ARG A 210 ILE A 220 AA3 3 TYR A 191 ? ASN A 197 ? TYR A 355 ASN A 361 AA3 4 THR A 130 ? ARG A 132 ? THR A 294 ARG A 296 AA4 1 ILE A 34 ? GLU A 37 ? ILE A 198 GLU A 201 AA4 2 ARG A 46 ? ILE A 56 ? ARG A 210 ILE A 220 AA4 3 ILE A 339 ? ILE A 343 ? ILE A 503 ILE A 507 AA4 4 PHE A 114 ? ALA A 118 ? PHE A 278 ALA A 282 AA4 5 GLU A 219 ? ASP A 222 ? GLU A 383 ASP A 386 AA5 1 TYR A 134 ? TYR A 136 ? TYR A 298 TYR A 300 AA5 2 PRO A 144 ? PHE A 147 ? PRO A 308 PHE A 311 AA6 1 ALA A 274 ? THR A 276 ? ALA A 438 THR A 440 AA6 2 THR A 286 ? VAL A 288 ? THR A 450 VAL A 452 AA7 1 ARG A 293 ? TYR A 295 ? ARG A 457 TYR A 459 AA7 2 GLN A 397 ? TYR A 400 ? GLN A 561 TYR A 564 AA7 3 PHE A 323 ? GLU A 325 ? PHE A 487 GLU A 489 AA8 1 VAL A 346 ? PRO A 347 ? VAL A 510 PRO A 511 AA8 2 TRP A 361 ? LEU A 362 ? TRP A 525 LEU A 526 AA9 1 ILE A 408 ? VAL A 411 ? ILE A 572 VAL A 575 AA9 2 GLN A 422 ? LYS A 425 ? GLN A 586 LYS A 589 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 94 ? N ARG A 258 O GLN A 365 ? O GLN A 529 AA1 2 3 O VAL A 370 ? O VAL A 534 N TRP A 23 ? N TRP A 187 AA1 3 4 N LEU A 26 ? N LEU A 190 O LEU A 188 ? O LEU A 352 AA2 1 2 N ARG A 94 ? N ARG A 258 O GLN A 365 ? O GLN A 529 AA2 2 3 O GLU A 369 ? O GLU A 533 N ARG A 89 ? N ARG A 253 AA2 3 4 N VAL A 86 ? N VAL A 250 O MET A 234 ? O MET A 398 AA3 1 2 N LEU A 35 ? N LEU A 199 O ALA A 48 ? O ALA A 212 AA3 2 3 N LEU A 49 ? N LEU A 213 O ILE A 194 ? O ILE A 358 AA3 3 4 O TYR A 191 ? O TYR A 355 N ARG A 132 ? N ARG A 296 AA4 1 2 N LEU A 35 ? N LEU A 199 O ALA A 48 ? O ALA A 212 AA4 2 3 N ALA A 54 ? N ALA A 218 O VAL A 341 ? O VAL A 505 AA4 3 4 O GLY A 342 ? O GLY A 506 N GLN A 116 ? N GLN A 280 AA4 4 5 N LEU A 115 ? N LEU A 279 O PHE A 221 ? O PHE A 385 AA5 1 2 N THR A 135 ? N THR A 299 O THR A 145 ? O THR A 309 AA6 1 2 N ALA A 274 ? N ALA A 438 O VAL A 288 ? O VAL A 452 AA7 1 2 N LYS A 294 ? N LYS A 458 O GLN A 399 ? O GLN A 563 AA7 2 3 O LEU A 398 ? O LEU A 562 N GLU A 324 ? N GLU A 488 AA8 1 2 N VAL A 346 ? N VAL A 510 O LEU A 362 ? O LEU A 526 AA9 1 2 N ALA A 409 ? N ALA A 573 O ILE A 424 ? O ILE A 588 # _atom_sites.entry_id 8TJE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 165 165 ALA ALA A . n A 1 2 THR 2 166 166 THR THR A . n A 1 3 ALA 3 167 167 ALA ALA A . n A 1 4 ILE 4 168 168 ILE ILE A . n A 1 5 LEU 5 169 169 LEU LEU A . n A 1 6 ARG 6 170 170 ARG ARG A . n A 1 7 PRO 7 171 171 PRO PRO A . n A 1 8 ILE 8 172 172 ILE ILE A . n A 1 9 GLY 9 173 173 GLY GLY A . n A 1 10 LEU 10 174 174 LEU LEU A . n A 1 11 HIS 11 175 175 HIS HIS A . n A 1 12 VAL 12 176 176 VAL VAL A . n A 1 13 GLU 13 177 177 GLU GLU A . n A 1 14 LYS 14 178 178 LYS LYS A . n A 1 15 PHE 15 179 179 PHE PHE A . n A 1 16 GLN 16 180 180 GLN GLN A . n A 1 17 GLN 17 181 181 GLN GLN A . n A 1 18 THR 18 182 182 THR THR A . n A 1 19 TYR 19 183 183 TYR TYR A . n A 1 20 ARG 20 184 184 ARG ARG A . n A 1 21 LYS 21 185 185 LYS LYS A . n A 1 22 LYS 22 186 186 LYS LYS A . n A 1 23 TRP 23 187 187 TRP TRP A . n A 1 24 ARG 24 188 188 ARG ARG A . n A 1 25 PHE 25 189 189 PHE PHE A . n A 1 26 LEU 26 190 190 LEU LEU A . n A 1 27 THR 27 191 191 THR THR A . n A 1 28 SER 28 192 192 SER SER A . n A 1 29 ALA 29 193 193 ALA ALA A . n A 1 30 ASN 30 194 194 ASN ASN A . n A 1 31 ALA 31 195 195 ALA ALA A . n A 1 32 ASN 32 196 196 ASN ASN A . n A 1 33 VAL 33 197 197 VAL VAL A . n A 1 34 ILE 34 198 198 ILE ILE A . n A 1 35 LEU 35 199 199 LEU LEU A . n A 1 36 ALA 36 200 200 ALA ALA A . n A 1 37 GLU 37 201 201 GLU GLU A . n A 1 38 ALA 38 202 202 ALA ALA A . n A 1 39 ALA 39 203 203 ALA ALA A . n A 1 40 SER 40 204 204 SER SER A . n A 1 41 GLY 41 205 205 GLY GLY A . n A 1 42 GLU 42 206 206 GLU GLU A . n A 1 43 ARG 43 207 207 ARG ARG A . n A 1 44 PRO 44 208 208 PRO PRO A . n A 1 45 ALA 45 209 209 ALA ALA A . n A 1 46 ARG 46 210 210 ARG ARG A . n A 1 47 TRP 47 211 211 TRP TRP A . n A 1 48 ALA 48 212 212 ALA ALA A . n A 1 49 LEU 49 213 213 LEU LEU A . n A 1 50 THR 50 214 214 THR THR A . n A 1 51 THR 51 215 215 THR THR A . n A 1 52 GLY 52 216 216 GLY GLY A . n A 1 53 MET 53 217 217 MET MET A . n A 1 54 ALA 54 218 218 ALA ALA A . n A 1 55 SER 55 219 219 SER SER A . n A 1 56 ILE 56 220 220 ILE ILE A . n A 1 57 PRO 57 221 221 PRO PRO A . n A 1 58 TRP 58 222 222 TRP TRP A . n A 1 59 GLU 59 223 223 GLU GLU A . n A 1 60 TYR 60 224 224 TYR TYR A . n A 1 61 LEU 61 225 225 LEU LEU A . n A 1 62 PHE 62 226 226 PHE PHE A . n A 1 63 PHE 63 227 227 PHE PHE A . n A 1 64 TYR 64 228 228 TYR TYR A . n A 1 65 MET 65 229 229 MET MET A . n A 1 66 SER 66 230 230 SER SER A . n A 1 67 PRO 67 231 231 PRO PRO A . n A 1 68 ALA 68 232 232 ALA ALA A . n A 1 69 GLU 69 233 233 GLU GLU A . n A 1 70 TYR 70 234 234 TYR TYR A . n A 1 71 ASN 71 235 235 ASN ASN A . n A 1 72 ARG 72 236 236 ARG ARG A . n A 1 73 MET 73 237 237 MET MET A . n A 1 74 LYS 74 238 238 LYS LYS A . n A 1 75 ASN 75 239 239 ASN ASN A . n A 1 76 TYR 76 240 240 TYR TYR A . n A 1 77 PRO 77 241 241 PRO PRO A . n A 1 78 GLY 78 242 242 GLY GLY A . n A 1 79 THR 79 243 243 THR THR A . n A 1 80 PHE 80 244 244 PHE PHE A . n A 1 81 ALA 81 245 245 ALA ALA A . n A 1 82 LYS 82 246 246 LYS LYS A . n A 1 83 SER 83 247 247 SER SER A . n A 1 84 ALA 84 248 248 ALA ALA A . n A 1 85 SER 85 249 249 SER SER A . n A 1 86 VAL 86 250 250 VAL VAL A . n A 1 87 ARG 87 251 251 ARG ARG A . n A 1 88 ILE 88 252 252 ILE ILE A . n A 1 89 ARG 89 253 253 ARG ARG A . n A 1 90 THR 90 254 254 THR THR A . n A 1 91 TRP 91 255 255 TRP TRP A . n A 1 92 ASN 92 256 256 ASN ASN A . n A 1 93 THR 93 257 257 THR THR A . n A 1 94 ARG 94 258 258 ARG ARG A . n A 1 95 VAL 95 259 259 VAL VAL A . n A 1 96 ALA 96 260 260 ALA ALA A . n A 1 97 PHE 97 261 261 PHE PHE A . n A 1 98 GLN 98 262 262 GLN GLN A . n A 1 99 THR 99 263 263 THR THR A . n A 1 100 GLY 100 264 264 GLY GLY A . n A 1 101 ASP 101 265 265 ASP ASP A . n A 1 102 THR 102 266 266 THR THR A . n A 1 103 GLN 103 267 267 GLN GLN A . n A 1 104 THR 104 268 268 THR THR A . n A 1 105 ALA 105 269 269 ALA ALA A . n A 1 106 ASN 106 270 270 ASN ASN A . n A 1 107 ALA 107 271 271 ALA ALA A . n A 1 108 THR 108 272 272 THR THR A . n A 1 109 LEU 109 273 273 LEU LEU A . n A 1 110 ASN 110 274 274 ASN ASN A . n A 1 111 GLN 111 275 275 GLN GLN A . n A 1 112 ASN 112 276 276 ASN ASN A . n A 1 113 LYS 113 277 277 LYS LYS A . n A 1 114 PHE 114 278 278 PHE PHE A . n A 1 115 LEU 115 279 279 LEU LEU A . n A 1 116 GLN 116 280 280 GLN GLN A . n A 1 117 VAL 117 281 281 VAL VAL A . n A 1 118 ALA 118 282 282 ALA ALA A . n A 1 119 LYS 119 283 283 LYS LYS A . n A 1 120 GLY 120 284 284 GLY GLY A . n A 1 121 ILE 121 285 285 ILE ILE A . n A 1 122 ARG 122 286 286 ARG ARG A . n A 1 123 SER 123 287 287 SER SER A . n A 1 124 ILE 124 288 288 ILE ILE A . n A 1 125 PRO 125 289 289 PRO PRO A . n A 1 126 PHE 126 290 290 PHE PHE A . n A 1 127 ILE 127 291 291 ILE ILE A . n A 1 128 CYS 128 292 292 CYS CYS A . n A 1 129 SER 129 293 293 SER SER A . n A 1 130 THR 130 294 294 THR THR A . n A 1 131 ASN 131 295 295 ASN ASN A . n A 1 132 ARG 132 296 296 ARG ARG A . n A 1 133 LYS 133 297 297 LYS LYS A . n A 1 134 TYR 134 298 298 TYR TYR A . n A 1 135 THR 135 299 299 THR THR A . n A 1 136 TYR 136 300 300 TYR TYR A . n A 1 137 SER 137 301 301 SER SER A . n A 1 138 ASP 138 302 302 ASP ASP A . n A 1 139 THR 139 303 303 THR THR A . n A 1 140 GLU 140 304 304 GLU GLU A . n A 1 141 PRO 141 305 305 PRO PRO A . n A 1 142 MET 142 306 306 MET MET A . n A 1 143 GLN 143 307 307 GLN GLN A . n A 1 144 PRO 144 308 308 PRO PRO A . n A 1 145 THR 145 309 309 THR THR A . n A 1 146 GLY 146 310 310 GLY GLY A . n A 1 147 PHE 147 311 311 PHE PHE A . n A 1 148 ALA 148 312 312 ALA ALA A . n A 1 149 THR 149 313 313 THR THR A . n A 1 150 LEU 150 314 314 LEU LEU A . n A 1 151 THR 151 315 315 THR THR A . n A 1 152 SER 152 316 316 SER SER A . n A 1 153 TYR 153 317 317 TYR TYR A . n A 1 154 GLU 154 318 318 GLU GLU A . n A 1 155 TYR 155 319 319 TYR TYR A . n A 1 156 ARG 156 320 320 ARG ARG A . n A 1 157 ASP 157 321 321 ASP ASP A . n A 1 158 GLY 158 322 322 GLY GLY A . n A 1 159 LEU 159 323 323 LEU LEU A . n A 1 160 LYS 160 324 324 LYS LYS A . n A 1 161 THR 161 325 325 THR THR A . n A 1 162 ALA 162 326 326 ALA ALA A . n A 1 163 MET 163 327 327 MET MET A . n A 1 164 TYR 164 328 328 TYR TYR A . n A 1 165 GLY 165 329 329 GLY GLY A . n A 1 166 TYR 166 330 330 TYR TYR A . n A 1 167 ASP 167 331 331 ASP ASP A . n A 1 168 ASN 168 332 332 ASN ASN A . n A 1 169 ASP 169 333 333 ASP ASP A . n A 1 170 ASN 170 334 334 ASN ASN A . n A 1 171 LYS 171 335 335 LYS LYS A . n A 1 172 ASP 172 336 336 ASP ASP A . n A 1 173 PHE 173 337 337 PHE PHE A . n A 1 174 ALA 174 338 338 ALA ALA A . n A 1 175 LYS 175 339 339 LYS LYS A . n A 1 176 LYS 176 340 340 LYS LYS A . n A 1 177 PRO 177 341 341 PRO PRO A . n A 1 178 PRO 178 342 342 PRO PRO A . n A 1 179 ALA 179 343 343 ALA ALA A . n A 1 180 ASP 180 344 344 ASP ASP A . n A 1 181 ALA 181 345 345 ALA ALA A . n A 1 182 THR 182 346 346 THR THR A . n A 1 183 GLY 183 347 347 GLY GLY A . n A 1 184 ALA 184 348 348 ALA ALA A . n A 1 185 GLU 185 349 349 GLU GLU A . n A 1 186 ILE 186 350 350 ILE ILE A . n A 1 187 TYR 187 351 351 TYR TYR A . n A 1 188 LEU 188 352 352 LEU LEU A . n A 1 189 GLN 189 353 353 GLN GLN A . n A 1 190 ASP 190 354 354 ASP ASP A . n A 1 191 TYR 191 355 355 TYR TYR A . n A 1 192 LEU 192 356 356 LEU LEU A . n A 1 193 THR 193 357 357 THR THR A . n A 1 194 ILE 194 358 358 ILE ILE A . n A 1 195 TYR 195 359 359 TYR TYR A . n A 1 196 THR 196 360 360 THR THR A . n A 1 197 ASN 197 361 361 ASN ASN A . n A 1 198 ASP 198 362 362 ASP ASP A . n A 1 199 ALA 199 363 363 ALA ALA A . n A 1 200 ARG 200 364 364 ARG ARG A . n A 1 201 ALA 201 365 365 ALA ALA A . n A 1 202 THR 202 366 366 THR THR A . n A 1 203 THR 203 367 367 THR THR A . n A 1 204 GLY 204 368 368 GLY GLY A . n A 1 205 THR 205 369 369 THR THR A . n A 1 206 LYS 206 370 370 LYS LYS A . n A 1 207 ILE 207 371 371 ILE ILE A . n A 1 208 LEU 208 372 372 LEU LEU A . n A 1 209 ALA 209 373 373 ALA ALA A . n A 1 210 GLY 210 374 374 GLY GLY A . n A 1 211 PHE 211 375 375 PHE PHE A . n A 1 212 PRO 212 376 376 PRO PRO A . n A 1 213 PRO 213 377 377 PRO PRO A . n A 1 214 TYR 214 378 378 TYR TYR A . n A 1 215 LYS 215 379 379 LYS LYS A . n A 1 216 ASN 216 380 380 ASN ASN A . n A 1 217 PHE 217 381 381 PHE PHE A . n A 1 218 ILE 218 382 382 ILE ILE A . n A 1 219 GLU 219 383 383 GLU GLU A . n A 1 220 GLU 220 384 384 GLU GLU A . n A 1 221 PHE 221 385 385 PHE PHE A . n A 1 222 ASP 222 386 386 ASP ASP A . n A 1 223 ALA 223 387 387 ALA ALA A . n A 1 224 SER 224 388 388 SER SER A . n A 1 225 ALA 225 389 389 ALA ALA A . n A 1 226 CYS 226 390 390 CYS CYS A . n A 1 227 ILE 227 391 391 ILE ILE A . n A 1 228 ASN 228 392 392 ASN ASN A . n A 1 229 THR 229 393 393 THR THR A . n A 1 230 ASP 230 394 394 ASP ASP A . n A 1 231 VAL 231 395 395 VAL VAL A . n A 1 232 VAL 232 396 396 VAL VAL A . n A 1 233 ALA 233 397 397 ALA ALA A . n A 1 234 MET 234 398 398 MET MET A . n A 1 235 ASP 235 399 399 ASP ASP A . n A 1 236 TYR 236 400 400 TYR TYR A . n A 1 237 ASP 237 401 401 ASP ASP A . n A 1 238 PHE 238 402 402 PHE PHE A . n A 1 239 SER 239 403 403 SER SER A . n A 1 240 TYR 240 404 404 TYR TYR A . n A 1 241 ALA 241 405 405 ALA ALA A . n A 1 242 PRO 242 406 406 PRO PRO A . n A 1 243 LEU 243 407 407 LEU LEU A . n A 1 244 VAL 244 408 408 VAL VAL A . n A 1 245 PRO 245 409 409 PRO PRO A . n A 1 246 GLN 246 410 410 GLN GLN A . n A 1 247 PHE 247 411 411 PHE PHE A . n A 1 248 ALA 248 412 412 ALA ALA A . n A 1 249 PRO 249 413 413 PRO PRO A . n A 1 250 VAL 250 414 414 VAL VAL A . n A 1 251 PRO 251 415 415 PRO PRO A . n A 1 252 ASN 252 416 416 ASN ASN A . n A 1 253 ASN 253 417 417 ASN ASN A . n A 1 254 LEU 254 418 418 LEU LEU A . n A 1 255 ILE 255 419 419 ILE ILE A . n A 1 256 THR 256 420 420 THR THR A . n A 1 257 GLN 257 421 421 GLN GLN A . n A 1 258 ASN 258 422 422 ASN ASN A . n A 1 259 TYR 259 423 423 TYR TYR A . n A 1 260 ASN 260 424 424 ASN ASN A . n A 1 261 GLY 261 425 425 GLY GLY A . n A 1 262 SER 262 426 426 SER SER A . n A 1 263 TYR 263 427 427 TYR TYR A . n A 1 264 PRO 264 428 428 PRO PRO A . n A 1 265 ALA 265 429 429 ALA ALA A . n A 1 266 GLY 266 430 430 GLY GLY A . n A 1 267 THR 267 431 431 THR THR A . n A 1 268 LYS 268 432 432 LYS LYS A . n A 1 269 ASN 269 433 433 ASN ASN A . n A 1 270 GLU 270 434 434 GLU GLU A . n A 1 271 VAL 271 435 435 VAL VAL A . n A 1 272 THR 272 436 436 THR THR A . n A 1 273 ALA 273 437 437 ALA ALA A . n A 1 274 ALA 274 438 438 ALA ALA A . n A 1 275 LYS 275 439 439 LYS LYS A . n A 1 276 THR 276 440 440 THR THR A . n A 1 277 THR 277 441 441 THR THR A . n A 1 278 ASP 278 442 442 ASP ASP A . n A 1 279 SER 279 443 443 SER SER A . n A 1 280 SER 280 444 444 SER SER A . n A 1 281 GLN 281 445 445 GLN GLN A . n A 1 282 ALA 282 446 446 ALA ALA A . n A 1 283 THR 283 447 447 THR THR A . n A 1 284 ALA 284 448 448 ALA ALA A . n A 1 285 PRO 285 449 449 PRO PRO A . n A 1 286 THR 286 450 450 THR THR A . n A 1 287 GLN 287 451 451 GLN GLN A . n A 1 288 VAL 288 452 452 VAL VAL A . n A 1 289 ARG 289 453 453 ARG ARG A . n A 1 290 ASN 290 454 454 ASN ASN A . n A 1 291 ALA 291 455 455 ALA ALA A . n A 1 292 PRO 292 456 456 PRO PRO A . n A 1 293 ARG 293 457 457 ARG ARG A . n A 1 294 LYS 294 458 458 LYS LYS A . n A 1 295 TYR 295 459 459 TYR TYR A . n A 1 296 ILE 296 460 460 ILE ILE A . n A 1 297 GLN 297 461 461 GLN GLN A . n A 1 298 GLY 298 462 462 GLY GLY A . n A 1 299 PRO 299 463 463 PRO PRO A . n A 1 300 HIS 300 464 464 HIS HIS A . n A 1 301 ALA 301 465 465 ALA ALA A . n A 1 302 ASP 302 466 466 ASP ASP A . n A 1 303 THR 303 467 467 THR THR A . n A 1 304 THR 304 468 468 THR THR A . n A 1 305 PHE 305 469 469 PHE PHE A . n A 1 306 PHE 306 470 470 PHE PHE A . n A 1 307 ASP 307 471 471 ASP ASP A . n A 1 308 GLU 308 472 472 GLU GLU A . n A 1 309 GLU 309 473 473 GLU GLU A . n A 1 310 GLN 310 474 474 GLN GLN A . n A 1 311 ASN 311 475 475 ASN ASN A . n A 1 312 TYR 312 476 476 TYR TYR A . n A 1 313 LEU 313 477 477 LEU LEU A . n A 1 314 ARG 314 478 478 ARG ARG A . n A 1 315 VAL 315 479 479 VAL VAL A . n A 1 316 PRO 316 480 480 PRO PRO A . n A 1 317 ILE 317 481 481 ILE ILE A . n A 1 318 GLU 318 482 482 GLU GLU A . n A 1 319 GLN 319 483 483 GLN GLN A . n A 1 320 GLY 320 484 484 GLY GLY A . n A 1 321 GLY 321 485 485 GLY GLY A . n A 1 322 ILE 322 486 486 ILE ILE A . n A 1 323 PHE 323 487 487 PHE PHE A . n A 1 324 GLU 324 488 488 GLU GLU A . n A 1 325 GLU 325 489 489 GLU GLU A . n A 1 326 VAL 326 490 490 VAL VAL A . n A 1 327 ASN 327 491 491 ASN ASN A . n A 1 328 VAL 328 492 492 VAL VAL A . n A 1 329 GLU 329 493 493 GLU GLU A . n A 1 330 THR 330 494 494 THR THR A . n A 1 331 VAL 331 495 495 VAL VAL A . n A 1 332 HIS 332 496 496 HIS HIS A . n A 1 333 ASP 333 497 497 ASP ASP A . n A 1 334 THR 334 498 498 THR THR A . n A 1 335 GLN 335 499 499 GLN GLN A . n A 1 336 MET 336 500 500 MET MET A . n A 1 337 PRO 337 501 501 PRO PRO A . n A 1 338 SER 338 502 502 SER SER A . n A 1 339 ILE 339 503 503 ILE ILE A . n A 1 340 ASN 340 504 504 ASN ASN A . n A 1 341 VAL 341 505 505 VAL VAL A . n A 1 342 GLY 342 506 506 GLY GLY A . n A 1 343 ILE 343 507 507 ILE ILE A . n A 1 344 ARG 344 508 508 ARG ARG A . n A 1 345 ALA 345 509 509 ALA ALA A . n A 1 346 VAL 346 510 510 VAL VAL A . n A 1 347 PRO 347 511 511 PRO PRO A . n A 1 348 LYS 348 512 512 LYS LYS A . n A 1 349 LEU 349 513 513 LEU LEU A . n A 1 350 THR 350 514 514 THR THR A . n A 1 351 THR 351 515 515 THR THR A . n A 1 352 ILE 352 516 516 ILE ILE A . n A 1 353 ASP 353 517 517 ASP ASP A . n A 1 354 GLU 354 518 518 GLU GLU A . n A 1 355 THR 355 519 519 THR THR A . n A 1 356 THR 356 520 520 THR THR A . n A 1 357 GLN 357 521 521 GLN GLN A . n A 1 358 ALA 358 522 522 ALA ALA A . n A 1 359 ASN 359 523 523 ASN ASN A . n A 1 360 SER 360 524 524 SER SER A . n A 1 361 TRP 361 525 525 TRP TRP A . n A 1 362 LEU 362 526 526 LEU LEU A . n A 1 363 ASP 363 527 527 ASP ASP A . n A 1 364 ALA 364 528 528 ALA ALA A . n A 1 365 GLN 365 529 529 GLN GLN A . n A 1 366 GLY 366 530 530 GLY GLY A . n A 1 367 TYR 367 531 531 TYR TYR A . n A 1 368 PHE 368 532 532 PHE PHE A . n A 1 369 GLU 369 533 533 GLU GLU A . n A 1 370 VAL 370 534 534 VAL VAL A . n A 1 371 ASP 371 535 535 ASP ASP A . n A 1 372 CYS 372 536 536 CYS CYS A . n A 1 373 VAL 373 537 537 VAL VAL A . n A 1 374 LEU 374 538 538 LEU LEU A . n A 1 375 THR 375 539 539 THR THR A . n A 1 376 THR 376 540 540 THR THR A . n A 1 377 GLU 377 541 541 GLU GLU A . n A 1 378 SER 378 542 542 SER SER A . n A 1 379 VAL 379 543 543 VAL VAL A . n A 1 380 ASP 380 544 544 ASP ASP A . n A 1 381 PRO 381 545 545 PRO PRO A . n A 1 382 TYR 382 546 546 TYR TYR A . n A 1 383 THR 383 547 547 THR THR A . n A 1 384 TYR 384 548 548 TYR TYR A . n A 1 385 ILE 385 549 549 ILE ILE A . n A 1 386 LYS 386 550 550 LYS LYS A . n A 1 387 GLY 387 551 551 GLY GLY A . n A 1 388 GLY 388 552 552 GLY GLY A . n A 1 389 CYS 389 553 553 CYS CYS A . n A 1 390 TYR 390 554 554 TYR TYR A . n A 1 391 SER 391 555 555 SER SER A . n A 1 392 ALA 392 556 556 ALA ALA A . n A 1 393 ASN 393 557 557 ASN ASN A . n A 1 394 THR 394 558 558 THR THR A . n A 1 395 LYS 395 559 559 LYS LYS A . n A 1 396 SER 396 560 560 SER SER A . n A 1 397 GLN 397 561 561 GLN GLN A . n A 1 398 LEU 398 562 562 LEU LEU A . n A 1 399 GLN 399 563 563 GLN GLN A . n A 1 400 TYR 400 564 564 TYR TYR A . n A 1 401 PHE 401 565 565 PHE PHE A . n A 1 402 ALA 402 566 566 ALA ALA A . n A 1 403 SER 403 567 567 SER SER A . n A 1 404 ASP 404 568 568 ASP ASP A . n A 1 405 GLY 405 569 569 GLY GLY A . n A 1 406 ARG 406 570 570 ARG ARG A . n A 1 407 PRO 407 571 571 PRO PRO A . n A 1 408 ILE 408 572 572 ILE ILE A . n A 1 409 ALA 409 573 573 ALA ALA A . n A 1 410 LYS 410 574 574 LYS LYS A . n A 1 411 VAL 411 575 575 VAL VAL A . n A 1 412 TYR 412 576 576 TYR TYR A . n A 1 413 ASP 413 577 577 ASP ASP A . n A 1 414 ASN 414 578 578 ASN ASN A . n A 1 415 PRO 415 579 579 PRO PRO A . n A 1 416 ASN 416 580 580 ASN ASN A . n A 1 417 VAL 417 581 581 VAL VAL A . n A 1 418 TYR 418 582 582 TYR TYR A . n A 1 419 GLY 419 583 583 GLY GLY A . n A 1 420 ARG 420 584 584 ARG ARG A . n A 1 421 MET 421 585 585 MET MET A . n A 1 422 GLN 422 586 586 GLN GLN A . n A 1 423 MET 423 587 587 MET MET A . n A 1 424 ILE 424 588 588 ILE ILE A . n A 1 425 LYS 425 589 589 LYS LYS A . n A 1 426 THR 426 590 590 THR THR A . n A 1 427 VAL 427 591 591 VAL VAL A . n A 1 428 LYS 428 592 592 LYS LYS A . n A 1 429 PRO 429 593 593 PRO PRO A . n B 2 1 DC 1 801 801 DC DC B . n B 2 2 DG 2 802 802 DG DG B . n C 3 1 DC 1 821 821 DC DC C . n C 3 2 DA 2 822 822 DA DA C . n C 3 3 DG 3 823 823 DG DG C . n C 3 4 DG 4 824 824 DG DG C . n C 3 5 DC 5 825 825 DC DC C . n C 3 6 DC 6 826 826 DC DC C . n C 3 7 DA 7 827 827 DA DA C . n C 3 8 DA 8 828 828 DA DA C . n C 3 9 DA 9 829 829 DA DA C . n D 4 1 DT 1 836 836 DT DT D . n D 4 2 DC 2 837 837 DC DC D . n D 4 3 DG 3 838 838 DG DG D . n D 4 4 DA 4 839 839 DA DA D . n D 4 5 DA 5 840 840 DA DA D . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email jason.kaelber@rutgers.edu _pdbx_contact_author.name_first Jason _pdbx_contact_author.name_last Kaelber _pdbx_contact_author.name_mi T _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9426-1030 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.14_b42094.' _pdbx_struct_assembly.oligomeric_details 240-meric _pdbx_struct_assembly.oligomeric_count 240 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression ;1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60 ; _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 -0.0 -0.0 0.0 1.0 -0.0 0.0 -0.0 -0.0 1.0 -0.0 2 'point symmetry operation' ? ? -0.809017 -0.500000 0.309017 510.30000 -0.500000 0.309017 -0.809017 510.30000 0.309017 -0.809017 -0.500000 510.30000 3 'point symmetry operation' ? ? 0.0 1.0 -0.0 -0.0 0.0 0.0 -1.0 510.30000 -1.0 -0.0 -0.0 510.30000 4 'point symmetry operation' ? ? 0.809017 -0.500000 -0.309017 255.15000 -0.500000 -0.309017 -0.809017 667.99137 0.309017 0.809017 -0.500000 97.45863 5 'point symmetry operation' ? ? 0.500000 0.309017 -0.809017 255.15000 -0.309017 -0.809017 -0.500000 667.99137 -0.809017 0.500000 -0.309017 412.84137 6 'point symmetry operation' ? ? -0.309017 -0.809017 -0.500000 667.99137 -0.809017 0.500000 -0.309017 412.84137 0.500000 0.309017 -0.809017 255.15000 7 'point symmetry operation' ? ? -0.809017 0.500000 -0.309017 412.84137 0.500000 0.309017 -0.809017 255.15000 -0.309017 -0.809017 -0.500000 667.99137 8 'point symmetry operation' ? ? -0.809017 -0.500000 -0.309017 667.99137 0.500000 -0.309017 -0.809017 412.84137 0.309017 -0.809017 0.500000 255.15000 9 'point symmetry operation' ? ? -0.309017 0.809017 -0.500000 255.15000 -0.809017 -0.500000 -0.309017 667.99137 -0.500000 0.309017 0.809017 97.45863 10 'point symmetry operation' ? ? 0.500000 -0.309017 -0.809017 412.84137 -0.309017 0.809017 -0.500000 255.15000 0.809017 0.500000 0.309017 -157.69137 11 'point symmetry operation' ? ? 0.0 -0.0 -1.0 510.30000 -1.0 -0.0 -0.0 510.30000 0.0 1.0 -0.0 -0.0 12 'point symmetry operation' ? ? -0.500000 -0.309017 -0.809017 667.99137 0.309017 0.809017 -0.500000 97.45863 0.809017 -0.500000 -0.309017 255.15000 13 'point symmetry operation' ? ? -0.500000 0.309017 -0.809017 510.30000 0.309017 -0.809017 -0.500000 510.30000 -0.809017 -0.500000 0.309017 510.30000 14 'point symmetry operation' ? ? -0.309017 -0.809017 -0.500000 667.99137 0.809017 -0.500000 0.309017 97.45863 -0.500000 -0.309017 0.809017 255.15000 15 'point symmetry operation' ? ? -0.809017 0.500000 -0.309017 412.84137 -0.500000 -0.309017 0.809017 255.15000 0.309017 0.809017 0.500000 -157.69137 16 'point symmetry operation' ? ? 0.500000 0.309017 -0.809017 255.15000 0.309017 0.809017 0.500000 -157.69137 0.809017 -0.500000 0.309017 97.45863 17 'point symmetry operation' ? ? -0.500000 0.309017 -0.809017 510.30000 -0.309017 0.809017 0.500000 0.0 0.809017 0.500000 -0.309017 -0.0 18 'point symmetry operation' ? ? 0.0 0.0 -1.0 510.30000 1.0 0.0 -0.0 -0.0 -0.0 -1.0 -0.0 510.30000 19 'point symmetry operation' ? ? -0.500000 -0.309017 -0.809017 667.99137 -0.309017 -0.809017 0.500000 412.84137 -0.809017 0.500000 0.309017 255.15000 20 'point symmetry operation' ? ? 0.0 -1.0 0.0 510.30000 -0.0 -0.0 1.0 0.0 -1.0 -0.0 -0.0 510.30000 21 'point symmetry operation' ? ? -0.809017 0.500000 0.309017 255.15000 0.500000 0.309017 0.809017 -157.69137 0.309017 0.809017 -0.500000 97.45863 22 'point symmetry operation' ? ? 0.809017 0.500000 -0.309017 -0.0 0.500000 -0.309017 0.809017 0.0 0.309017 -0.809017 -0.500000 510.30000 23 'point symmetry operation' ? ? -0.309017 0.809017 -0.500000 255.15000 0.809017 0.500000 0.309017 -157.69137 0.500000 -0.309017 -0.809017 412.84137 24 'point symmetry operation' ? ? 0.500000 -0.309017 -0.809017 412.84137 0.309017 -0.809017 0.500000 255.15000 -0.809017 -0.500000 -0.309017 667.99137 25 'point symmetry operation' ? ? -0.809017 -0.500000 -0.309017 667.99137 -0.500000 0.309017 0.809017 97.45863 -0.309017 0.809017 -0.500000 255.15000 26 'point symmetry operation' ? ? -0.309017 -0.809017 0.500000 412.84137 -0.809017 0.500000 0.309017 255.15000 -0.500000 -0.309017 -0.809017 667.99137 27 'point symmetry operation' ? ? -0.309017 0.809017 0.500000 -0.0 0.809017 0.500000 -0.309017 -0.0 -0.500000 0.309017 -0.809017 510.30000 28 'point symmetry operation' ? ? 1.0 -0.0 0.0 -0.0 -0.0 -1.0 0.0 510.30000 0.0 0.0 -1.0 510.30000 29 'point symmetry operation' ? ? 0.309017 0.809017 -0.500000 97.45863 0.809017 -0.500000 -0.309017 255.15000 -0.500000 -0.309017 -0.809017 667.99137 30 'point symmetry operation' ? ? 0.309017 -0.809017 -0.500000 510.30000 -0.809017 -0.500000 0.309017 510.30000 -0.500000 0.309017 -0.809017 510.30000 31 'point symmetry operation' ? ? -1.0 -0.0 0.0 510.30000 -0.0 1.0 0.0 0.0 0.0 0.0 -1.0 510.30000 32 'point symmetry operation' ? ? 0.809017 0.500000 -0.309017 0.0 -0.500000 0.309017 -0.809017 510.30000 -0.309017 0.809017 0.500000 -0.0 33 'point symmetry operation' ? ? -0.0 -1.0 -0.0 510.30000 0.0 0.0 -1.0 510.30000 1.0 0.0 0.0 -0.0 34 'point symmetry operation' ? ? -0.809017 0.500000 0.309017 255.15000 -0.500000 -0.309017 -0.809017 667.99137 -0.309017 -0.809017 0.500000 412.84137 35 'point symmetry operation' ? ? -0.500000 -0.309017 0.809017 255.15000 -0.309017 -0.809017 -0.500000 667.99137 0.809017 -0.500000 0.309017 97.45863 36 'point symmetry operation' ? ? 0.309017 0.809017 0.500000 -157.69137 -0.809017 0.500000 -0.309017 412.84137 -0.500000 -0.309017 0.809017 255.15000 37 'point symmetry operation' ? ? 0.809017 -0.500000 0.309017 97.45863 0.500000 0.309017 -0.809017 255.15000 0.309017 0.809017 0.500000 -157.69137 38 'point symmetry operation' ? ? 0.809017 0.500000 0.309017 -157.69137 0.500000 -0.309017 -0.809017 412.84137 -0.309017 0.809017 -0.500000 255.15000 39 'point symmetry operation' ? ? 0.309017 -0.809017 0.500000 255.15000 -0.809017 -0.500000 -0.309017 667.99137 0.500000 -0.309017 -0.809017 412.84137 40 'point symmetry operation' ? ? -0.500000 0.309017 0.809017 97.45863 -0.309017 0.809017 -0.500000 255.15000 -0.809017 -0.500000 -0.309017 667.99137 41 'point symmetry operation' ? ? -0.0 0.0 1.0 -0.0 -1.0 0.0 0.0 510.30000 -0.0 -1.0 0.0 510.30000 42 'point symmetry operation' ? ? 0.500000 0.309017 0.809017 -157.69137 0.309017 0.809017 -0.500000 97.45863 -0.809017 0.500000 0.309017 255.15000 43 'point symmetry operation' ? ? 0.500000 -0.309017 0.809017 0.0 0.309017 -0.809017 -0.500000 510.30000 0.809017 0.500000 -0.309017 -0.0 44 'point symmetry operation' ? ? 0.309017 0.809017 0.500000 -157.69137 0.809017 -0.500000 0.309017 97.45863 0.500000 0.309017 -0.809017 255.15000 45 'point symmetry operation' ? ? 0.809017 -0.500000 0.309017 97.45863 -0.500000 -0.309017 0.809017 255.15000 -0.309017 -0.809017 -0.500000 667.99137 46 'point symmetry operation' ? ? -0.500000 -0.309017 0.809017 255.15000 0.309017 0.809017 0.500000 -157.69137 -0.809017 0.500000 -0.309017 412.84137 47 'point symmetry operation' ? ? 0.500000 -0.309017 0.809017 -0.0 -0.309017 0.809017 0.500000 0.0 -0.809017 -0.500000 0.309017 510.30000 48 'point symmetry operation' ? ? -0.0 -0.0 1.0 0.0 1.0 -0.0 0.0 -0.0 0.0 1.0 0.0 -0.0 49 'point symmetry operation' ? ? 0.500000 0.309017 0.809017 -157.69137 -0.309017 -0.809017 0.500000 412.84137 0.809017 -0.500000 -0.309017 255.15000 50 'point symmetry operation' ? ? -0.0 1.0 0.0 0.0 -0.0 -0.0 1.0 0.0 1.0 0.0 0.0 -0.0 51 'point symmetry operation' ? ? 0.809017 -0.500000 -0.309017 255.15000 0.500000 0.309017 0.809017 -157.69137 -0.309017 -0.809017 0.500000 412.84137 52 'point symmetry operation' ? ? -0.809017 -0.500000 0.309017 510.30000 0.500000 -0.309017 0.809017 0.0 -0.309017 0.809017 0.500000 -0.0 53 'point symmetry operation' ? ? 0.309017 -0.809017 0.500000 255.15000 0.809017 0.500000 0.309017 -157.69137 -0.500000 0.309017 0.809017 97.45863 54 'point symmetry operation' ? ? -0.500000 0.309017 0.809017 97.45863 0.309017 -0.809017 0.500000 255.15000 0.809017 0.500000 0.309017 -157.69137 55 'point symmetry operation' ? ? 0.809017 0.500000 0.309017 -157.69137 -0.500000 0.309017 0.809017 97.45863 0.309017 -0.809017 0.500000 255.15000 56 'point symmetry operation' ? ? 0.309017 0.809017 -0.500000 97.45863 -0.809017 0.500000 0.309017 255.15000 0.500000 0.309017 0.809017 -157.69137 57 'point symmetry operation' ? ? 0.309017 -0.809017 -0.500000 510.30000 0.809017 0.500000 -0.309017 -0.0 0.500000 -0.309017 0.809017 -0.0 58 'point symmetry operation' ? ? -1.0 -0.0 -0.0 510.30000 -0.0 -1.0 -0.0 510.30000 -0.0 -0.0 1.0 0.0 59 'point symmetry operation' ? ? -0.309017 -0.809017 0.500000 412.84137 0.809017 -0.500000 -0.309017 255.15000 0.500000 0.309017 0.809017 -157.69137 60 'point symmetry operation' ? ? -0.309017 0.809017 0.500000 0.0 -0.809017 -0.500000 0.309017 510.30000 0.500000 -0.309017 0.809017 -0.0 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8TJE _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_reconstruction.entry_id 8TJE _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 8130 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.name 'Zophobas morio densovirus' _em_entity_assembly.details 'Purified from asymptomatic T. molitor larvae' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 8TJE _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 1200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.details unspecified _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate SPECIES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped NO _em_virus_entity.empty NO _em_virus_entity.details ? # _em_vitrification.entry_id 8TJE _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 293 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8TJE _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8TJE _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 801 ? ? "C1'" B DC 801 ? ? N1 B DC 801 ? ? 111.76 108.30 3.46 0.30 N 2 1 "O4'" C DC 825 ? ? "C1'" C DC 825 ? ? N1 C DC 825 ? ? 110.79 108.30 2.49 0.30 N 3 1 "O4'" C DC 826 ? ? "C1'" C DC 826 ? ? N1 C DC 826 ? ? 110.27 108.30 1.97 0.30 N 4 1 N3 C DC 826 ? ? C2 C DC 826 ? ? O2 C DC 826 ? ? 117.39 121.90 -4.51 0.70 N 5 1 "C3'" C DA 827 ? ? "C2'" C DA 827 ? ? "C1'" C DA 827 ? ? 97.24 102.40 -5.16 0.80 N 6 1 "O4'" C DA 827 ? ? "C1'" C DA 827 ? ? N9 C DA 827 ? ? 119.46 108.30 11.16 0.30 N 7 1 C5 C DA 827 ? ? C6 C DA 827 ? ? N1 C DA 827 ? ? 121.70 117.70 4.00 0.50 N 8 1 "O4'" C DA 828 ? ? "C1'" C DA 828 ? ? N9 C DA 828 ? ? 114.47 108.30 6.17 0.30 N 9 1 C5 C DA 828 ? ? C6 C DA 828 ? ? N1 C DA 828 ? ? 121.54 117.70 3.84 0.50 N 10 1 N1 C DA 828 ? ? C6 C DA 828 ? ? N6 C DA 828 ? ? 112.93 118.60 -5.67 0.60 N 11 1 "O4'" C DA 829 ? ? "C1'" C DA 829 ? ? N9 C DA 829 ? ? 113.72 108.30 5.42 0.30 N 12 1 C5 C DA 829 ? ? C6 C DA 829 ? ? N1 C DA 829 ? ? 121.64 117.70 3.94 0.50 N 13 1 N1 C DA 829 ? ? C6 C DA 829 ? ? N6 C DA 829 ? ? 112.78 118.60 -5.82 0.60 N 14 1 "O4'" D DA 839 ? ? "C1'" D DA 839 ? ? N9 D DA 839 ? ? 112.16 108.30 3.86 0.30 N 15 1 C5 D DA 839 ? ? C6 D DA 839 ? ? N1 D DA 839 ? ? 121.35 117.70 3.65 0.50 N 16 1 N1 D DA 839 ? ? C6 D DA 839 ? ? N6 D DA 839 ? ? 113.42 118.60 -5.18 0.60 N 17 1 "O4'" D DA 840 ? ? "C1'" D DA 840 ? ? N9 D DA 840 ? ? 110.48 108.30 2.18 0.30 N 18 1 C5 D DA 840 ? ? C6 D DA 840 ? ? N1 D DA 840 ? ? 121.12 117.70 3.42 0.50 N 19 1 N1 D DA 840 ? ? C6 D DA 840 ? ? N6 D DA 840 ? ? 113.18 118.60 -5.42 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 348 ? ? -68.26 -177.81 2 1 THR A 467 ? ? -98.10 35.98 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG C 824 ? ? 0.081 'SIDE CHAIN' 2 1 DA C 827 ? ? 0.120 'SIDE CHAIN' 3 1 DG D 838 ? ? 0.052 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # _em_buffer_component.buffer_id 1 _em_buffer_component.concentration ? _em_buffer_component.concentration_units 1x _em_buffer_component.formula PBS _em_buffer_component.id 1 _em_buffer_component.name 'Phosphate-buffered saline' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2750924 _em_entity_assembly_naturalsource.organism 'Zophobas morio densovirus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 3 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 33 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 151035 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cisTEM ? 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM 3.8 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cisTEM ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cisTEM 4.0 CLASSIFICATION ? 12 1 ? ? cisTEM ? RECONSTRUCTION ? 13 1 ? ? RELION 4.0 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 2 _em_specimen.details 'Purified virus from homogenized T. molitor larval tissue' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 2755281 _em_virus_natural_host.organism 'Zophobas morio' _em_virus_natural_host.strain ? # _em_virus_shell.diameter 28 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.id 1 _em_virus_shell.name ? _em_virus_shell.triangulation 1 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Other government' 'United States' ? 1 'Other private' 'United States' ? 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' #