data_8U1D # _entry.id 8U1D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8U1D pdb_00008u1d 10.2210/pdb8u1d/pdb WWPDB D_1000277066 ? ? EMDB EMD-41810 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2024-01-03 ? 2 'EM metadata' 1 0 2024-01-03 ? 3 'Half map' 1 0 2024-01-03 1 4 'Half map' 1 0 2024-01-03 2 5 Image 1 0 2024-01-03 ? 6 'Primary map' 1 0 2024-01-03 ? 7 'Structure model' 1 1 2024-07-17 ? 8 'Half map' 1 0 2024-01-03 1 9 'Half map' 1 0 2024-01-03 2 10 Image 1 0 2024-01-03 ? 11 'Primary map' 1 0 2024-01-03 ? 12 'Structure model' 1 2 2024-11-13 ? 13 'Half map' 1 0 2024-01-03 1 14 'Half map' 1 0 2024-01-03 2 15 Image 1 0 2024-01-03 ? 16 'Primary map' 1 0 2024-01-03 ? 17 'Structure model' 1 3 2025-06-04 ? 18 'EM metadata' 1 1 2025-06-04 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? 7 8 'Half map' repository 'Initial release' ? ? 8 9 'Half map' repository 'Initial release' ? ? 9 10 Image repository 'Initial release' ? ? 10 11 'Primary map' repository 'Initial release' ? ? 11 13 'Half map' repository 'Initial release' ? ? 12 14 'Half map' repository 'Initial release' ? ? 13 15 Image repository 'Initial release' ? ? 14 16 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 7 'Structure model' 'Data collection' 2 7 'Structure model' 'Database references' 3 12 'Structure model' 'Data collection' 4 12 'Structure model' 'Structure summary' 5 17 'Structure model' 'Data collection' 6 18 'EM metadata' 'Data processing' 7 18 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 7 'Structure model' citation 2 7 'Structure model' citation_author 3 7 'Structure model' em_admin 4 12 'Structure model' em_admin 5 12 'Structure model' pdbx_entry_details 6 12 'Structure model' pdbx_modification_feature 7 17 'Structure model' em_admin 8 17 'Structure model' em_software 9 18 'EM metadata' em_admin 10 18 'EM metadata' em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 7 'Structure model' '_citation.journal_abbrev' 2 7 'Structure model' '_citation.journal_id_CSD' 3 7 'Structure model' '_citation.journal_id_ISSN' 4 7 'Structure model' '_citation.journal_volume' 5 7 'Structure model' '_citation.page_first' 6 7 'Structure model' '_citation.page_last' 7 7 'Structure model' '_citation.pdbx_database_id_DOI' 8 7 'Structure model' '_citation.pdbx_database_id_PubMed' 9 7 'Structure model' '_citation.title' 10 7 'Structure model' '_citation.year' 11 7 'Structure model' '_em_admin.last_update' 12 12 'Structure model' '_em_admin.last_update' 13 12 'Structure model' '_pdbx_entry_details.has_protein_modification' 14 17 'Structure model' '_em_admin.last_update' 15 17 'Structure model' '_em_software.name' 16 18 'EM metadata' '_em_admin.last_update' 17 18 'EM metadata' '_em_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8U1D _pdbx_database_status.recvd_initial_deposition_date 2023-08-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details ;Cryo-EM structure of vaccine elicited antibody DH1285 Fab bound to the one of the gp120 promoter of CH505M5chimer.6R.SOSIP.664v4.1 Env ; _pdbx_database_related.db_id EMD-41810 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email priyamvada.acharya@duke.edu _pdbx_contact_author.name_first Priyamvada _pdbx_contact_author.name_last Acharya _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0089-277X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Thakur, B.' 1 0000-0002-2050-982X 'Stalls, V.D.' 2 0000-0002-1878-0581 'Acharya, P.' 3 0000-0002-0089-277X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Cell _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1097-4172 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 187 _citation.language ? _citation.page_first 79 _citation.page_last 94.e24 _citation.title 'Vaccine induction of CD4-mimicking HIV-1 broadly neutralizing antibody precursors in macaques.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.cell.2023.12.002 _citation.pdbx_database_id_PubMed 38181743 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saunders, K.O.' 1 ? primary 'Counts, J.' 2 ? primary 'Thakur, B.' 3 ? primary 'Stalls, V.' 4 ? primary 'Edwards, R.' 5 ? primary 'Manne, K.' 6 ? primary 'Lu, X.' 7 ? primary 'Mansouri, K.' 8 ? primary 'Chen, Y.' 9 ? primary 'Parks, R.' 10 ? primary 'Barr, M.' 11 ? primary 'Sutherland, L.' 12 ? primary 'Bal, J.' 13 ? primary 'Havill, N.' 14 ? primary 'Chen, H.' 15 ? primary 'Machiele, E.' 16 ? primary 'Jamieson, N.' 17 ? primary 'Hora, B.' 18 ? primary 'Kopp, M.' 19 ? primary 'Janowska, K.' 20 ? primary 'Anasti, K.' 21 ? primary 'Jiang, C.' 22 ? primary 'Van Itallie, E.' 23 ? primary 'Venkatayogi, S.' 24 ? primary 'Eaton, A.' 25 ? primary 'Henderson, R.' 26 ? primary 'Barbosa, C.' 27 ? primary 'Alam, S.M.' 28 ? primary 'Santra, S.' 29 ? primary 'Weissman, D.' 30 ? primary 'Moody, M.A.' 31 ? primary 'Cain, D.W.' 32 ? primary 'Tam, Y.K.' 33 ? primary 'Lewis, M.' 34 ? primary 'Williams, W.B.' 35 ? primary 'Wiehe, K.' 36 ? primary 'Montefiori, D.C.' 37 ? primary 'Acharya, P.' 38 ? primary 'Haynes, B.F.' 39 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Envelope glycoprotein gp120' 72669.078 1 ? ? ? CH505M5chimer.6R.SOSIP.664v4.1 2 polymer man 'DH1285 Heavy Chain' 26396.316 1 ? ? ? ? 3 polymer man 'DH1285 Light Chain' 25240.955 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVL KNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNAL FYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVV STQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINES KWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIH CRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPT RCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQ ARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNE QDLLALD ; ;MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVL KNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNAL FYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVV STQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINES KWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIH CRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPT RCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQ ARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNE QDLLALD ; A ? 2 'polypeptide(L)' no no ;MGWSCIILFLVATATGVHAQVHLEQSGAEVKEPGSSVRLSCEASGYTFTDYYIHWVRQSPRQGLEWMGWINPYYGNTHYA EKFQGRVAMTRDRSTTTAYMDLSSLTSEDTAVYYCARDEGGSGSYSYFDSWGQGVLVTVSSASTKGPSVFPLAPSSRSTS ESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVE IKT ; ;MGWSCIILFLVATATGVHAQVHLEQSGAEVKEPGSSVRLSCEASGYTFTDYYIHWVRQSPRQGLEWMGWINPYYGNTHYA EKFQGRVAMTRDRSTTTAYMDLSSLTSEDTAVYYCARDEGGSGSYSYFDSWGQGVLVTVSSASTKGPSVFPLAPSSRSTS ESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVE IKT ; I ? 3 'polypeptide(L)' no no ;MGWSCIILFLVATATGVHADIQMTQSPSSLSASVGDTVTITCRASQDINNHLSWYQQKPGRAPKALIYSASSLETGVPSR FSGSGSGTDYTLTISSLQPEDFATYYCQHYSTSPYTFGRGTKVDIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYP REASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC ; ;MGWSCIILFLVATATGVHADIQMTQSPSSLSASVGDTVTITCRASQDINNHLSWYQQKPGRAPKALIYSASSLETGVPSR FSGSGSGTDYTLTISSLQPEDFATYYCQHYSTSPYTFGRGTKVDIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYP REASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC ; J ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 MET n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 GLN n 1 8 PRO n 1 9 LEU n 1 10 ALA n 1 11 THR n 1 12 LEU n 1 13 TYR n 1 14 LEU n 1 15 LEU n 1 16 GLY n 1 17 MET n 1 18 LEU n 1 19 VAL n 1 20 ALA n 1 21 SER n 1 22 VAL n 1 23 LEU n 1 24 ALA n 1 25 ALA n 1 26 GLU n 1 27 ASN n 1 28 LEU n 1 29 TRP n 1 30 VAL n 1 31 THR n 1 32 VAL n 1 33 TYR n 1 34 TYR n 1 35 GLY n 1 36 VAL n 1 37 PRO n 1 38 VAL n 1 39 TRP n 1 40 LYS n 1 41 GLU n 1 42 ALA n 1 43 LYS n 1 44 THR n 1 45 THR n 1 46 LEU n 1 47 PHE n 1 48 CYS n 1 49 ALA n 1 50 SER n 1 51 ASP n 1 52 ALA n 1 53 LYS n 1 54 ALA n 1 55 TYR n 1 56 GLU n 1 57 LYS n 1 58 LYS n 1 59 VAL n 1 60 HIS n 1 61 ASN n 1 62 VAL n 1 63 TRP n 1 64 ALA n 1 65 THR n 1 66 HIS n 1 67 ALA n 1 68 CYS n 1 69 VAL n 1 70 PRO n 1 71 THR n 1 72 ASP n 1 73 PRO n 1 74 ASN n 1 75 PRO n 1 76 GLN n 1 77 GLU n 1 78 MET n 1 79 VAL n 1 80 LEU n 1 81 LYS n 1 82 ASN n 1 83 VAL n 1 84 THR n 1 85 GLU n 1 86 ASN n 1 87 PHE n 1 88 ASN n 1 89 MET n 1 90 TRP n 1 91 LYS n 1 92 ASN n 1 93 ASP n 1 94 MET n 1 95 VAL n 1 96 ASP n 1 97 GLN n 1 98 MET n 1 99 HIS n 1 100 GLU n 1 101 ASP n 1 102 VAL n 1 103 ILE n 1 104 SER n 1 105 LEU n 1 106 TRP n 1 107 ASP n 1 108 GLN n 1 109 SER n 1 110 LEU n 1 111 LYS n 1 112 PRO n 1 113 CYS n 1 114 VAL n 1 115 LYS n 1 116 LEU n 1 117 THR n 1 118 PRO n 1 119 LEU n 1 120 CYS n 1 121 VAL n 1 122 THR n 1 123 LEU n 1 124 ASN n 1 125 CYS n 1 126 THR n 1 127 ASN n 1 128 ALA n 1 129 THR n 1 130 ALA n 1 131 SER n 1 132 ASN n 1 133 SER n 1 134 SER n 1 135 ILE n 1 136 ILE n 1 137 GLU n 1 138 GLY n 1 139 MET n 1 140 LYS n 1 141 ASN n 1 142 CYS n 1 143 SER n 1 144 PHE n 1 145 ASN n 1 146 ILE n 1 147 THR n 1 148 THR n 1 149 GLU n 1 150 LEU n 1 151 ARG n 1 152 ASP n 1 153 LYS n 1 154 ARG n 1 155 GLU n 1 156 LYS n 1 157 LYS n 1 158 ASN n 1 159 ALA n 1 160 LEU n 1 161 PHE n 1 162 TYR n 1 163 LYS n 1 164 LEU n 1 165 ASP n 1 166 ILE n 1 167 VAL n 1 168 GLN n 1 169 LEU n 1 170 ASP n 1 171 GLY n 1 172 ASN n 1 173 SER n 1 174 SER n 1 175 GLN n 1 176 TYR n 1 177 ARG n 1 178 LEU n 1 179 ILE n 1 180 ASN n 1 181 CYS n 1 182 ASN n 1 183 THR n 1 184 SER n 1 185 VAL n 1 186 ILE n 1 187 THR n 1 188 GLN n 1 189 ALA n 1 190 CYS n 1 191 PRO n 1 192 LYS n 1 193 VAL n 1 194 SER n 1 195 PHE n 1 196 ASP n 1 197 PRO n 1 198 ILE n 1 199 PRO n 1 200 ILE n 1 201 HIS n 1 202 TYR n 1 203 CYS n 1 204 ALA n 1 205 PRO n 1 206 ALA n 1 207 GLY n 1 208 TYR n 1 209 ALA n 1 210 ILE n 1 211 LEU n 1 212 LYS n 1 213 CYS n 1 214 ASN n 1 215 ASN n 1 216 LYS n 1 217 THR n 1 218 PHE n 1 219 THR n 1 220 GLY n 1 221 THR n 1 222 GLY n 1 223 PRO n 1 224 CYS n 1 225 ASN n 1 226 ASN n 1 227 VAL n 1 228 SER n 1 229 THR n 1 230 VAL n 1 231 GLN n 1 232 CYS n 1 233 THR n 1 234 HIS n 1 235 GLY n 1 236 ILE n 1 237 LYS n 1 238 PRO n 1 239 VAL n 1 240 VAL n 1 241 SER n 1 242 THR n 1 243 GLN n 1 244 LEU n 1 245 LEU n 1 246 LEU n 1 247 ASN n 1 248 GLY n 1 249 SER n 1 250 LEU n 1 251 ALA n 1 252 GLU n 1 253 GLY n 1 254 GLU n 1 255 ILE n 1 256 ILE n 1 257 ILE n 1 258 ARG n 1 259 SER n 1 260 GLU n 1 261 ASN n 1 262 ILE n 1 263 THR n 1 264 ASN n 1 265 ASN n 1 266 VAL n 1 267 LYS n 1 268 THR n 1 269 ILE n 1 270 ILE n 1 271 VAL n 1 272 HIS n 1 273 LEU n 1 274 ASN n 1 275 GLU n 1 276 SER n 1 277 VAL n 1 278 LYS n 1 279 ILE n 1 280 GLU n 1 281 CYS n 1 282 THR n 1 283 ARG n 1 284 PRO n 1 285 ASN n 1 286 ASN n 1 287 LYS n 1 288 THR n 1 289 ARG n 1 290 THR n 1 291 SER n 1 292 ILE n 1 293 ARG n 1 294 ILE n 1 295 GLY n 1 296 PRO n 1 297 GLY n 1 298 GLN n 1 299 TRP n 1 300 PHE n 1 301 TYR n 1 302 ALA n 1 303 THR n 1 304 GLY n 1 305 GLN n 1 306 VAL n 1 307 ILE n 1 308 GLY n 1 309 ASP n 1 310 ILE n 1 311 ARG n 1 312 GLU n 1 313 ALA n 1 314 TYR n 1 315 CYS n 1 316 ASN n 1 317 ILE n 1 318 ASN n 1 319 GLU n 1 320 SER n 1 321 LYS n 1 322 TRP n 1 323 ASN n 1 324 GLU n 1 325 THR n 1 326 LEU n 1 327 GLN n 1 328 ARG n 1 329 VAL n 1 330 SER n 1 331 LYS n 1 332 LYS n 1 333 LEU n 1 334 LYS n 1 335 GLU n 1 336 TYR n 1 337 PHE n 1 338 PRO n 1 339 HIS n 1 340 LYS n 1 341 ASN n 1 342 ILE n 1 343 THR n 1 344 PHE n 1 345 GLN n 1 346 PRO n 1 347 SER n 1 348 SER n 1 349 GLY n 1 350 GLY n 1 351 ASP n 1 352 LEU n 1 353 GLU n 1 354 ILE n 1 355 THR n 1 356 THR n 1 357 HIS n 1 358 SER n 1 359 PHE n 1 360 ASN n 1 361 CYS n 1 362 GLY n 1 363 GLY n 1 364 GLU n 1 365 PHE n 1 366 PHE n 1 367 TYR n 1 368 CYS n 1 369 ASN n 1 370 THR n 1 371 SER n 1 372 SER n 1 373 LEU n 1 374 PHE n 1 375 ASN n 1 376 ARG n 1 377 THR n 1 378 TYR n 1 379 MET n 1 380 ALA n 1 381 ASN n 1 382 SER n 1 383 THR n 1 384 ASP n 1 385 MET n 1 386 ALA n 1 387 ASN n 1 388 SER n 1 389 THR n 1 390 GLU n 1 391 THR n 1 392 ASN n 1 393 SER n 1 394 THR n 1 395 ARG n 1 396 THR n 1 397 ILE n 1 398 THR n 1 399 ILE n 1 400 HIS n 1 401 CYS n 1 402 ARG n 1 403 ILE n 1 404 LYS n 1 405 GLN n 1 406 ILE n 1 407 ILE n 1 408 ASN n 1 409 MET n 1 410 TRP n 1 411 GLN n 1 412 GLU n 1 413 VAL n 1 414 GLY n 1 415 ARG n 1 416 ALA n 1 417 MET n 1 418 TYR n 1 419 ALA n 1 420 PRO n 1 421 PRO n 1 422 ILE n 1 423 ALA n 1 424 GLY n 1 425 ASN n 1 426 ILE n 1 427 THR n 1 428 CYS n 1 429 ILE n 1 430 SER n 1 431 ASN n 1 432 ILE n 1 433 THR n 1 434 GLY n 1 435 LEU n 1 436 LEU n 1 437 LEU n 1 438 THR n 1 439 ARG n 1 440 ASP n 1 441 GLY n 1 442 GLY n 1 443 LYS n 1 444 ASN n 1 445 ASN n 1 446 THR n 1 447 GLU n 1 448 THR n 1 449 PHE n 1 450 ARG n 1 451 PRO n 1 452 GLY n 1 453 GLY n 1 454 GLY n 1 455 ASN n 1 456 MET n 1 457 LYS n 1 458 ASP n 1 459 ASN n 1 460 TRP n 1 461 ARG n 1 462 SER n 1 463 GLU n 1 464 LEU n 1 465 TYR n 1 466 LYS n 1 467 TYR n 1 468 LYS n 1 469 VAL n 1 470 VAL n 1 471 LYS n 1 472 ILE n 1 473 GLU n 1 474 PRO n 1 475 LEU n 1 476 GLY n 1 477 VAL n 1 478 ALA n 1 479 PRO n 1 480 THR n 1 481 ARG n 1 482 CYS n 1 483 LYS n 1 484 ARG n 1 485 ARG n 1 486 VAL n 1 487 VAL n 1 488 GLY n 1 489 ARG n 1 490 ARG n 1 491 ARG n 1 492 ARG n 1 493 ARG n 1 494 ARG n 1 495 ALA n 1 496 VAL n 1 497 GLY n 1 498 ILE n 1 499 GLY n 1 500 ALA n 1 501 VAL n 1 502 PHE n 1 503 LEU n 1 504 GLY n 1 505 PHE n 1 506 LEU n 1 507 GLY n 1 508 ALA n 1 509 ALA n 1 510 GLY n 1 511 SER n 1 512 THR n 1 513 MET n 1 514 GLY n 1 515 ALA n 1 516 ALA n 1 517 SER n 1 518 MET n 1 519 THR n 1 520 LEU n 1 521 THR n 1 522 VAL n 1 523 GLN n 1 524 ALA n 1 525 ARG n 1 526 ASN n 1 527 LEU n 1 528 LEU n 1 529 SER n 1 530 GLY n 1 531 ILE n 1 532 VAL n 1 533 GLN n 1 534 GLN n 1 535 GLN n 1 536 SER n 1 537 ASN n 1 538 LEU n 1 539 LEU n 1 540 ARG n 1 541 ALA n 1 542 PRO n 1 543 GLU n 1 544 ALA n 1 545 GLN n 1 546 GLN n 1 547 HIS n 1 548 LEU n 1 549 LEU n 1 550 LYS n 1 551 LEU n 1 552 THR n 1 553 VAL n 1 554 TRP n 1 555 GLY n 1 556 ILE n 1 557 LYS n 1 558 GLN n 1 559 LEU n 1 560 GLN n 1 561 ALA n 1 562 ARG n 1 563 VAL n 1 564 LEU n 1 565 ALA n 1 566 VAL n 1 567 GLU n 1 568 ARG n 1 569 TYR n 1 570 LEU n 1 571 ARG n 1 572 ASP n 1 573 GLN n 1 574 GLN n 1 575 LEU n 1 576 LEU n 1 577 GLY n 1 578 ILE n 1 579 TRP n 1 580 GLY n 1 581 CYS n 1 582 SER n 1 583 GLY n 1 584 LYS n 1 585 LEU n 1 586 ILE n 1 587 CYS n 1 588 CYS n 1 589 THR n 1 590 ASN n 1 591 VAL n 1 592 PRO n 1 593 TRP n 1 594 ASN n 1 595 SER n 1 596 SER n 1 597 TRP n 1 598 SER n 1 599 ASN n 1 600 ARG n 1 601 ASN n 1 602 LEU n 1 603 SER n 1 604 GLU n 1 605 ILE n 1 606 TRP n 1 607 ASP n 1 608 ASN n 1 609 MET n 1 610 THR n 1 611 TRP n 1 612 LEU n 1 613 GLN n 1 614 TRP n 1 615 ASP n 1 616 LYS n 1 617 GLU n 1 618 ILE n 1 619 SER n 1 620 ASN n 1 621 TYR n 1 622 THR n 1 623 GLN n 1 624 ILE n 1 625 ILE n 1 626 TYR n 1 627 GLY n 1 628 LEU n 1 629 LEU n 1 630 GLU n 1 631 GLU n 1 632 SER n 1 633 GLN n 1 634 ASN n 1 635 GLN n 1 636 GLN n 1 637 GLU n 1 638 LYS n 1 639 ASN n 1 640 GLU n 1 641 GLN n 1 642 ASP n 1 643 LEU n 1 644 LEU n 1 645 ALA n 1 646 LEU n 1 647 ASP n 2 1 MET n 2 2 GLY n 2 3 TRP n 2 4 SER n 2 5 CYS n 2 6 ILE n 2 7 ILE n 2 8 LEU n 2 9 PHE n 2 10 LEU n 2 11 VAL n 2 12 ALA n 2 13 THR n 2 14 ALA n 2 15 THR n 2 16 GLY n 2 17 VAL n 2 18 HIS n 2 19 ALA n 2 20 GLN n 2 21 VAL n 2 22 HIS n 2 23 LEU n 2 24 GLU n 2 25 GLN n 2 26 SER n 2 27 GLY n 2 28 ALA n 2 29 GLU n 2 30 VAL n 2 31 LYS n 2 32 GLU n 2 33 PRO n 2 34 GLY n 2 35 SER n 2 36 SER n 2 37 VAL n 2 38 ARG n 2 39 LEU n 2 40 SER n 2 41 CYS n 2 42 GLU n 2 43 ALA n 2 44 SER n 2 45 GLY n 2 46 TYR n 2 47 THR n 2 48 PHE n 2 49 THR n 2 50 ASP n 2 51 TYR n 2 52 TYR n 2 53 ILE n 2 54 HIS n 2 55 TRP n 2 56 VAL n 2 57 ARG n 2 58 GLN n 2 59 SER n 2 60 PRO n 2 61 ARG n 2 62 GLN n 2 63 GLY n 2 64 LEU n 2 65 GLU n 2 66 TRP n 2 67 MET n 2 68 GLY n 2 69 TRP n 2 70 ILE n 2 71 ASN n 2 72 PRO n 2 73 TYR n 2 74 TYR n 2 75 GLY n 2 76 ASN n 2 77 THR n 2 78 HIS n 2 79 TYR n 2 80 ALA n 2 81 GLU n 2 82 LYS n 2 83 PHE n 2 84 GLN n 2 85 GLY n 2 86 ARG n 2 87 VAL n 2 88 ALA n 2 89 MET n 2 90 THR n 2 91 ARG n 2 92 ASP n 2 93 ARG n 2 94 SER n 2 95 THR n 2 96 THR n 2 97 THR n 2 98 ALA n 2 99 TYR n 2 100 MET n 2 101 ASP n 2 102 LEU n 2 103 SER n 2 104 SER n 2 105 LEU n 2 106 THR n 2 107 SER n 2 108 GLU n 2 109 ASP n 2 110 THR n 2 111 ALA n 2 112 VAL n 2 113 TYR n 2 114 TYR n 2 115 CYS n 2 116 ALA n 2 117 ARG n 2 118 ASP n 2 119 GLU n 2 120 GLY n 2 121 GLY n 2 122 SER n 2 123 GLY n 2 124 SER n 2 125 TYR n 2 126 SER n 2 127 TYR n 2 128 PHE n 2 129 ASP n 2 130 SER n 2 131 TRP n 2 132 GLY n 2 133 GLN n 2 134 GLY n 2 135 VAL n 2 136 LEU n 2 137 VAL n 2 138 THR n 2 139 VAL n 2 140 SER n 2 141 SER n 2 142 ALA n 2 143 SER n 2 144 THR n 2 145 LYS n 2 146 GLY n 2 147 PRO n 2 148 SER n 2 149 VAL n 2 150 PHE n 2 151 PRO n 2 152 LEU n 2 153 ALA n 2 154 PRO n 2 155 SER n 2 156 SER n 2 157 ARG n 2 158 SER n 2 159 THR n 2 160 SER n 2 161 GLU n 2 162 SER n 2 163 THR n 2 164 ALA n 2 165 ALA n 2 166 LEU n 2 167 GLY n 2 168 CYS n 2 169 LEU n 2 170 VAL n 2 171 LYS n 2 172 ASP n 2 173 TYR n 2 174 PHE n 2 175 PRO n 2 176 GLU n 2 177 PRO n 2 178 VAL n 2 179 THR n 2 180 VAL n 2 181 SER n 2 182 TRP n 2 183 ASN n 2 184 SER n 2 185 GLY n 2 186 SER n 2 187 LEU n 2 188 THR n 2 189 SER n 2 190 GLY n 2 191 VAL n 2 192 HIS n 2 193 THR n 2 194 PHE n 2 195 PRO n 2 196 ALA n 2 197 VAL n 2 198 LEU n 2 199 GLN n 2 200 SER n 2 201 SER n 2 202 GLY n 2 203 LEU n 2 204 TYR n 2 205 SER n 2 206 LEU n 2 207 SER n 2 208 SER n 2 209 VAL n 2 210 VAL n 2 211 THR n 2 212 VAL n 2 213 PRO n 2 214 SER n 2 215 SER n 2 216 SER n 2 217 LEU n 2 218 GLY n 2 219 THR n 2 220 GLN n 2 221 THR n 2 222 TYR n 2 223 VAL n 2 224 CYS n 2 225 ASN n 2 226 VAL n 2 227 ASN n 2 228 HIS n 2 229 LYS n 2 230 PRO n 2 231 SER n 2 232 ASN n 2 233 THR n 2 234 LYS n 2 235 VAL n 2 236 ASP n 2 237 LYS n 2 238 ARG n 2 239 VAL n 2 240 GLU n 2 241 ILE n 2 242 LYS n 2 243 THR n 3 1 MET n 3 2 GLY n 3 3 TRP n 3 4 SER n 3 5 CYS n 3 6 ILE n 3 7 ILE n 3 8 LEU n 3 9 PHE n 3 10 LEU n 3 11 VAL n 3 12 ALA n 3 13 THR n 3 14 ALA n 3 15 THR n 3 16 GLY n 3 17 VAL n 3 18 HIS n 3 19 ALA n 3 20 ASP n 3 21 ILE n 3 22 GLN n 3 23 MET n 3 24 THR n 3 25 GLN n 3 26 SER n 3 27 PRO n 3 28 SER n 3 29 SER n 3 30 LEU n 3 31 SER n 3 32 ALA n 3 33 SER n 3 34 VAL n 3 35 GLY n 3 36 ASP n 3 37 THR n 3 38 VAL n 3 39 THR n 3 40 ILE n 3 41 THR n 3 42 CYS n 3 43 ARG n 3 44 ALA n 3 45 SER n 3 46 GLN n 3 47 ASP n 3 48 ILE n 3 49 ASN n 3 50 ASN n 3 51 HIS n 3 52 LEU n 3 53 SER n 3 54 TRP n 3 55 TYR n 3 56 GLN n 3 57 GLN n 3 58 LYS n 3 59 PRO n 3 60 GLY n 3 61 ARG n 3 62 ALA n 3 63 PRO n 3 64 LYS n 3 65 ALA n 3 66 LEU n 3 67 ILE n 3 68 TYR n 3 69 SER n 3 70 ALA n 3 71 SER n 3 72 SER n 3 73 LEU n 3 74 GLU n 3 75 THR n 3 76 GLY n 3 77 VAL n 3 78 PRO n 3 79 SER n 3 80 ARG n 3 81 PHE n 3 82 SER n 3 83 GLY n 3 84 SER n 3 85 GLY n 3 86 SER n 3 87 GLY n 3 88 THR n 3 89 ASP n 3 90 TYR n 3 91 THR n 3 92 LEU n 3 93 THR n 3 94 ILE n 3 95 SER n 3 96 SER n 3 97 LEU n 3 98 GLN n 3 99 PRO n 3 100 GLU n 3 101 ASP n 3 102 PHE n 3 103 ALA n 3 104 THR n 3 105 TYR n 3 106 TYR n 3 107 CYS n 3 108 GLN n 3 109 HIS n 3 110 TYR n 3 111 SER n 3 112 THR n 3 113 SER n 3 114 PRO n 3 115 TYR n 3 116 THR n 3 117 PHE n 3 118 GLY n 3 119 ARG n 3 120 GLY n 3 121 THR n 3 122 LYS n 3 123 VAL n 3 124 ASP n 3 125 ILE n 3 126 LYS n 3 127 ARG n 3 128 ALA n 3 129 VAL n 3 130 ALA n 3 131 ALA n 3 132 PRO n 3 133 SER n 3 134 VAL n 3 135 PHE n 3 136 ILE n 3 137 PHE n 3 138 PRO n 3 139 PRO n 3 140 SER n 3 141 GLU n 3 142 ASP n 3 143 GLN n 3 144 VAL n 3 145 LYS n 3 146 SER n 3 147 GLY n 3 148 THR n 3 149 VAL n 3 150 SER n 3 151 VAL n 3 152 VAL n 3 153 CYS n 3 154 LEU n 3 155 LEU n 3 156 ASN n 3 157 ASN n 3 158 PHE n 3 159 TYR n 3 160 PRO n 3 161 ARG n 3 162 GLU n 3 163 ALA n 3 164 SER n 3 165 VAL n 3 166 LYS n 3 167 TRP n 3 168 LYS n 3 169 VAL n 3 170 ASP n 3 171 GLY n 3 172 VAL n 3 173 LEU n 3 174 LYS n 3 175 THR n 3 176 GLY n 3 177 ASN n 3 178 SER n 3 179 GLN n 3 180 GLU n 3 181 SER n 3 182 VAL n 3 183 THR n 3 184 GLU n 3 185 GLN n 3 186 ASP n 3 187 SER n 3 188 LYS n 3 189 ASP n 3 190 ASN n 3 191 THR n 3 192 TYR n 3 193 SER n 3 194 LEU n 3 195 SER n 3 196 SER n 3 197 THR n 3 198 LEU n 3 199 THR n 3 200 LEU n 3 201 SER n 3 202 SER n 3 203 THR n 3 204 ASP n 3 205 TYR n 3 206 GLN n 3 207 SER n 3 208 HIS n 3 209 ASN n 3 210 VAL n 3 211 TYR n 3 212 ALA n 3 213 CYS n 3 214 GLU n 3 215 VAL n 3 216 THR n 3 217 HIS n 3 218 GLN n 3 219 GLY n 3 220 LEU n 3 221 SER n 3 222 SER n 3 223 PRO n 3 224 VAL n 3 225 THR n 3 226 LYS n 3 227 SER n 3 228 PHE n 3 229 ASN n 3 230 ARG n 3 231 GLY n 3 232 GLU n 3 233 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 647 ? ? ? ? ? ? ? ? ? 'Human immunodeficiency virus 1' 11676 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 243 'Rhesus monkey' ? ? ? ? ? ? ? ? 'Macaca mulatta' 9544 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 233 'Rhesus monkey' ? ? ? ? ? ? ? ? 'Macaca mulatta' 9544 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 7 ? ? ? A . n A 1 2 PRO 2 8 ? ? ? A . n A 1 3 MET 3 9 ? ? ? A . n A 1 4 GLY 4 10 ? ? ? A . n A 1 5 SER 5 11 ? ? ? A . n A 1 6 LEU 6 12 ? ? ? A . n A 1 7 GLN 7 13 ? ? ? A . n A 1 8 PRO 8 14 ? ? ? A . n A 1 9 LEU 9 15 ? ? ? A . n A 1 10 ALA 10 16 ? ? ? A . n A 1 11 THR 11 17 ? ? ? A . n A 1 12 LEU 12 18 ? ? ? A . n A 1 13 TYR 13 19 ? ? ? A . n A 1 14 LEU 14 20 ? ? ? A . n A 1 15 LEU 15 21 ? ? ? A . n A 1 16 GLY 16 22 ? ? ? A . n A 1 17 MET 17 23 ? ? ? A . n A 1 18 LEU 18 24 ? ? ? A . n A 1 19 VAL 19 25 ? ? ? A . n A 1 20 ALA 20 26 ? ? ? A . n A 1 21 SER 21 27 ? ? ? A . n A 1 22 VAL 22 28 ? ? ? A . n A 1 23 LEU 23 29 ? ? ? A . n A 1 24 ALA 24 30 ? ? ? A . n A 1 25 ALA 25 31 ? ? ? A . n A 1 26 GLU 26 32 ? ? ? A . n A 1 27 ASN 27 33 ? ? ? A . n A 1 28 LEU 28 34 ? ? ? A . n A 1 29 TRP 29 35 ? ? ? A . n A 1 30 VAL 30 36 ? ? ? A . n A 1 31 THR 31 37 ? ? ? A . n A 1 32 VAL 32 38 ? ? ? A . n A 1 33 TYR 33 39 ? ? ? A . n A 1 34 TYR 34 40 ? ? ? A . n A 1 35 GLY 35 41 ? ? ? A . n A 1 36 VAL 36 42 ? ? ? A . n A 1 37 PRO 37 43 ? ? ? A . n A 1 38 VAL 38 44 ? ? ? A . n A 1 39 TRP 39 45 ? ? ? A . n A 1 40 LYS 40 46 46 LYS LYS A . n A 1 41 GLU 41 47 47 GLU GLU A . n A 1 42 ALA 42 48 48 ALA ALA A . n A 1 43 LYS 43 49 49 LYS LYS A . n A 1 44 THR 44 50 50 THR THR A . n A 1 45 THR 45 51 51 THR THR A . n A 1 46 LEU 46 52 52 LEU LEU A . n A 1 47 PHE 47 53 53 PHE PHE A . n A 1 48 CYS 48 54 54 CYS CYS A . n A 1 49 ALA 49 55 55 ALA ALA A . n A 1 50 SER 50 56 56 SER SER A . n A 1 51 ASP 51 57 57 ASP ASP A . n A 1 52 ALA 52 58 58 ALA ALA A . n A 1 53 LYS 53 59 59 LYS LYS A . n A 1 54 ALA 54 60 60 ALA ALA A . n A 1 55 TYR 55 61 61 TYR TYR A . n A 1 56 GLU 56 62 62 GLU GLU A . n A 1 57 LYS 57 63 63 LYS LYS A . n A 1 58 LYS 58 64 64 LYS LYS A . n A 1 59 VAL 59 65 65 VAL VAL A . n A 1 60 HIS 60 66 66 HIS HIS A . n A 1 61 ASN 61 67 67 ASN ASN A . n A 1 62 VAL 62 68 68 VAL VAL A . n A 1 63 TRP 63 69 69 TRP TRP A . n A 1 64 ALA 64 70 70 ALA ALA A . n A 1 65 THR 65 71 71 THR THR A . n A 1 66 HIS 66 72 72 HIS HIS A . n A 1 67 ALA 67 73 73 ALA ALA A . n A 1 68 CYS 68 74 74 CYS CYS A . n A 1 69 VAL 69 75 75 VAL VAL A . n A 1 70 PRO 70 76 76 PRO PRO A . n A 1 71 THR 71 77 77 THR THR A . n A 1 72 ASP 72 78 78 ASP ASP A . n A 1 73 PRO 73 79 79 PRO PRO A . n A 1 74 ASN 74 80 80 ASN ASN A . n A 1 75 PRO 75 81 81 PRO PRO A . n A 1 76 GLN 76 82 82 GLN GLN A . n A 1 77 GLU 77 83 83 GLU GLU A . n A 1 78 MET 78 84 84 MET MET A . n A 1 79 VAL 79 85 85 VAL VAL A . n A 1 80 LEU 80 86 86 LEU LEU A . n A 1 81 LYS 81 87 87 LYS LYS A . n A 1 82 ASN 82 88 88 ASN ASN A . n A 1 83 VAL 83 89 89 VAL VAL A . n A 1 84 THR 84 90 90 THR THR A . n A 1 85 GLU 85 91 91 GLU GLU A . n A 1 86 ASN 86 92 92 ASN ASN A . n A 1 87 PHE 87 93 93 PHE PHE A . n A 1 88 ASN 88 94 94 ASN ASN A . n A 1 89 MET 89 95 95 MET MET A . n A 1 90 TRP 90 96 96 TRP TRP A . n A 1 91 LYS 91 97 97 LYS LYS A . n A 1 92 ASN 92 98 98 ASN ASN A . n A 1 93 ASP 93 99 99 ASP ASP A . n A 1 94 MET 94 100 100 MET MET A . n A 1 95 VAL 95 101 101 VAL VAL A . n A 1 96 ASP 96 102 102 ASP ASP A . n A 1 97 GLN 97 103 103 GLN GLN A . n A 1 98 MET 98 104 104 MET MET A . n A 1 99 HIS 99 105 105 HIS HIS A . n A 1 100 GLU 100 106 106 GLU GLU A . n A 1 101 ASP 101 107 107 ASP ASP A . n A 1 102 VAL 102 108 108 VAL VAL A . n A 1 103 ILE 103 109 109 ILE ILE A . n A 1 104 SER 104 110 110 SER SER A . n A 1 105 LEU 105 111 111 LEU LEU A . n A 1 106 TRP 106 112 112 TRP TRP A . n A 1 107 ASP 107 113 113 ASP ASP A . n A 1 108 GLN 108 114 114 GLN GLN A . n A 1 109 SER 109 115 115 SER SER A . n A 1 110 LEU 110 116 116 LEU LEU A . n A 1 111 LYS 111 117 117 LYS LYS A . n A 1 112 PRO 112 118 118 PRO PRO A . n A 1 113 CYS 113 119 119 CYS CYS A . n A 1 114 VAL 114 120 120 VAL VAL A . n A 1 115 LYS 115 121 121 LYS LYS A . n A 1 116 LEU 116 122 122 LEU LEU A . n A 1 117 THR 117 123 123 THR THR A . n A 1 118 PRO 118 124 124 PRO PRO A . n A 1 119 LEU 119 125 125 LEU LEU A . n A 1 120 CYS 120 126 126 CYS CYS A . n A 1 121 VAL 121 127 127 VAL VAL A . n A 1 122 THR 122 128 128 THR THR A . n A 1 123 LEU 123 129 129 LEU LEU A . n A 1 124 ASN 124 130 130 ASN ASN A . n A 1 125 CYS 125 131 131 CYS CYS A . n A 1 126 THR 126 132 132 THR THR A . n A 1 127 ASN 127 133 133 ASN ASN A . n A 1 128 ALA 128 134 134 ALA ALA A . n A 1 129 THR 129 135 135 THR THR A . n A 1 130 ALA 130 136 136 ALA ALA A . n A 1 131 SER 131 137 137 SER SER A . n A 1 132 ASN 132 138 138 ASN ASN A . n A 1 133 SER 133 139 139 SER SER A . n A 1 134 SER 134 140 140 SER SER A . n A 1 135 ILE 135 141 141 ILE ILE A . n A 1 136 ILE 136 142 142 ILE ILE A . n A 1 137 GLU 137 143 143 GLU GLU A . n A 1 138 GLY 138 144 144 GLY GLY A . n A 1 139 MET 139 145 145 MET MET A . n A 1 140 LYS 140 146 146 LYS LYS A . n A 1 141 ASN 141 147 147 ASN ASN A . n A 1 142 CYS 142 157 157 CYS CYS A . n A 1 143 SER 143 158 158 SER SER A . n A 1 144 PHE 144 159 159 PHE PHE A . n A 1 145 ASN 145 160 160 ASN ASN A . n A 1 146 ILE 146 161 161 ILE ILE A . n A 1 147 THR 147 162 162 THR THR A . n A 1 148 THR 148 163 163 THR THR A . n A 1 149 GLU 149 164 164 GLU GLU A . n A 1 150 LEU 150 165 165 LEU LEU A . n A 1 151 ARG 151 166 166 ARG ARG A . n A 1 152 ASP 152 167 167 ASP ASP A . n A 1 153 LYS 153 168 168 LYS LYS A . n A 1 154 ARG 154 169 169 ARG ARG A . n A 1 155 GLU 155 170 170 GLU GLU A . n A 1 156 LYS 156 171 171 LYS LYS A . n A 1 157 LYS 157 172 172 LYS LYS A . n A 1 158 ASN 158 173 173 ASN ASN A . n A 1 159 ALA 159 174 174 ALA ALA A . n A 1 160 LEU 160 175 175 LEU LEU A . n A 1 161 PHE 161 176 176 PHE PHE A . n A 1 162 TYR 162 177 177 TYR TYR A . n A 1 163 LYS 163 178 178 LYS LYS A . n A 1 164 LEU 164 179 179 LEU LEU A . n A 1 165 ASP 165 180 180 ASP ASP A . n A 1 166 ILE 166 181 181 ILE ILE A . n A 1 167 VAL 167 182 182 VAL VAL A . n A 1 168 GLN 168 183 183 GLN GLN A . n A 1 169 LEU 169 184 184 LEU LEU A . n A 1 170 ASP 170 185 185 ASP ASP A . n A 1 171 GLY 171 186 186 GLY GLY A . n A 1 172 ASN 172 187 187 ASN ASN A . n A 1 173 SER 173 188 188 SER SER A . n A 1 174 SER 174 189 189 SER SER A . n A 1 175 GLN 175 190 190 GLN GLN A . n A 1 176 TYR 176 191 191 TYR TYR A . n A 1 177 ARG 177 192 192 ARG ARG A . n A 1 178 LEU 178 193 193 LEU LEU A . n A 1 179 ILE 179 194 194 ILE ILE A . n A 1 180 ASN 180 195 195 ASN ASN A . n A 1 181 CYS 181 196 196 CYS CYS A . n A 1 182 ASN 182 197 197 ASN ASN A . n A 1 183 THR 183 198 198 THR THR A . n A 1 184 SER 184 199 199 SER SER A . n A 1 185 VAL 185 200 200 VAL VAL A . n A 1 186 ILE 186 201 201 ILE ILE A . n A 1 187 THR 187 202 202 THR THR A . n A 1 188 GLN 188 203 203 GLN GLN A . n A 1 189 ALA 189 204 204 ALA ALA A . n A 1 190 CYS 190 205 205 CYS CYS A . n A 1 191 PRO 191 206 206 PRO PRO A . n A 1 192 LYS 192 207 207 LYS LYS A . n A 1 193 VAL 193 208 208 VAL VAL A . n A 1 194 SER 194 209 209 SER SER A . n A 1 195 PHE 195 210 210 PHE PHE A . n A 1 196 ASP 196 211 211 ASP ASP A . n A 1 197 PRO 197 212 212 PRO PRO A . n A 1 198 ILE 198 213 213 ILE ILE A . n A 1 199 PRO 199 214 214 PRO PRO A . n A 1 200 ILE 200 215 215 ILE ILE A . n A 1 201 HIS 201 216 216 HIS HIS A . n A 1 202 TYR 202 217 217 TYR TYR A . n A 1 203 CYS 203 218 218 CYS CYS A . n A 1 204 ALA 204 219 219 ALA ALA A . n A 1 205 PRO 205 220 220 PRO PRO A . n A 1 206 ALA 206 221 221 ALA ALA A . n A 1 207 GLY 207 222 222 GLY GLY A . n A 1 208 TYR 208 223 223 TYR TYR A . n A 1 209 ALA 209 224 224 ALA ALA A . n A 1 210 ILE 210 225 225 ILE ILE A . n A 1 211 LEU 211 226 226 LEU LEU A . n A 1 212 LYS 212 227 227 LYS LYS A . n A 1 213 CYS 213 228 228 CYS CYS A . n A 1 214 ASN 214 229 229 ASN ASN A . n A 1 215 ASN 215 230 230 ASN ASN A . n A 1 216 LYS 216 231 231 LYS LYS A . n A 1 217 THR 217 232 232 THR THR A . n A 1 218 PHE 218 233 233 PHE PHE A . n A 1 219 THR 219 234 234 THR THR A . n A 1 220 GLY 220 235 235 GLY GLY A . n A 1 221 THR 221 236 236 THR THR A . n A 1 222 GLY 222 237 237 GLY GLY A . n A 1 223 PRO 223 238 238 PRO PRO A . n A 1 224 CYS 224 239 239 CYS CYS A . n A 1 225 ASN 225 240 240 ASN ASN A . n A 1 226 ASN 226 241 241 ASN ASN A . n A 1 227 VAL 227 242 242 VAL VAL A . n A 1 228 SER 228 243 243 SER SER A . n A 1 229 THR 229 244 244 THR THR A . n A 1 230 VAL 230 245 245 VAL VAL A . n A 1 231 GLN 231 246 246 GLN GLN A . n A 1 232 CYS 232 247 247 CYS CYS A . n A 1 233 THR 233 248 248 THR THR A . n A 1 234 HIS 234 249 249 HIS HIS A . n A 1 235 GLY 235 250 250 GLY GLY A . n A 1 236 ILE 236 251 251 ILE ILE A . n A 1 237 LYS 237 252 252 LYS LYS A . n A 1 238 PRO 238 253 253 PRO PRO A . n A 1 239 VAL 239 254 254 VAL VAL A . n A 1 240 VAL 240 255 255 VAL VAL A . n A 1 241 SER 241 256 256 SER SER A . n A 1 242 THR 242 257 257 THR THR A . n A 1 243 GLN 243 258 258 GLN GLN A . n A 1 244 LEU 244 259 259 LEU LEU A . n A 1 245 LEU 245 260 260 LEU LEU A . n A 1 246 LEU 246 261 261 LEU LEU A . n A 1 247 ASN 247 262 262 ASN ASN A . n A 1 248 GLY 248 263 263 GLY GLY A . n A 1 249 SER 249 264 264 SER SER A . n A 1 250 LEU 250 265 265 LEU LEU A . n A 1 251 ALA 251 266 266 ALA ALA A . n A 1 252 GLU 252 267 267 GLU GLU A . n A 1 253 GLY 253 268 268 GLY GLY A . n A 1 254 GLU 254 269 269 GLU GLU A . n A 1 255 ILE 255 270 270 ILE ILE A . n A 1 256 ILE 256 271 271 ILE ILE A . n A 1 257 ILE 257 272 272 ILE ILE A . n A 1 258 ARG 258 273 273 ARG ARG A . n A 1 259 SER 259 274 274 SER SER A . n A 1 260 GLU 260 275 275 GLU GLU A . n A 1 261 ASN 261 276 276 ASN ASN A . n A 1 262 ILE 262 277 277 ILE ILE A . n A 1 263 THR 263 278 278 THR THR A . n A 1 264 ASN 264 279 279 ASN ASN A . n A 1 265 ASN 265 280 280 ASN ASN A . n A 1 266 VAL 266 281 281 VAL VAL A . n A 1 267 LYS 267 282 282 LYS LYS A . n A 1 268 THR 268 283 283 THR THR A . n A 1 269 ILE 269 284 284 ILE ILE A . n A 1 270 ILE 270 285 285 ILE ILE A . n A 1 271 VAL 271 286 286 VAL VAL A . n A 1 272 HIS 272 287 287 HIS HIS A . n A 1 273 LEU 273 288 288 LEU LEU A . n A 1 274 ASN 274 289 289 ASN ASN A . n A 1 275 GLU 275 290 290 GLU GLU A . n A 1 276 SER 276 291 291 SER SER A . n A 1 277 VAL 277 292 292 VAL VAL A . n A 1 278 LYS 278 293 293 LYS LYS A . n A 1 279 ILE 279 294 294 ILE ILE A . n A 1 280 GLU 280 295 295 GLU GLU A . n A 1 281 CYS 281 296 296 CYS CYS A . n A 1 282 THR 282 297 297 THR THR A . n A 1 283 ARG 283 298 298 ARG ARG A . n A 1 284 PRO 284 299 299 PRO PRO A . n A 1 285 ASN 285 300 300 ASN ASN A . n A 1 286 ASN 286 301 301 ASN ASN A . n A 1 287 LYS 287 302 302 LYS LYS A . n A 1 288 THR 288 303 303 THR THR A . n A 1 289 ARG 289 304 304 ARG ARG A . n A 1 290 THR 290 305 305 THR THR A . n A 1 291 SER 291 306 306 SER SER A . n A 1 292 ILE 292 307 307 ILE ILE A . n A 1 293 ARG 293 308 308 ARG ARG A . n A 1 294 ILE 294 309 309 ILE ILE A . n A 1 295 GLY 295 312 312 GLY GLY A . n A 1 296 PRO 296 313 313 PRO PRO A . n A 1 297 GLY 297 314 314 GLY GLY A . n A 1 298 GLN 298 315 315 GLN GLN A . n A 1 299 TRP 299 316 316 TRP TRP A . n A 1 300 PHE 300 317 317 PHE PHE A . n A 1 301 TYR 301 318 318 TYR TYR A . n A 1 302 ALA 302 319 319 ALA ALA A . n A 1 303 THR 303 320 320 THR THR A . n A 1 304 GLY 304 321 321 GLY GLY A . n A 1 305 GLN 305 321 321 GLN GLN A A n A 1 306 VAL 306 322 322 VAL VAL A . n A 1 307 ILE 307 323 323 ILE ILE A . n A 1 308 GLY 308 324 324 GLY GLY A . n A 1 309 ASP 309 325 325 ASP ASP A . n A 1 310 ILE 310 326 326 ILE ILE A . n A 1 311 ARG 311 327 327 ARG ARG A . n A 1 312 GLU 312 328 328 GLU GLU A . n A 1 313 ALA 313 329 329 ALA ALA A . n A 1 314 TYR 314 330 330 TYR TYR A . n A 1 315 CYS 315 331 331 CYS CYS A . n A 1 316 ASN 316 332 332 ASN ASN A . n A 1 317 ILE 317 333 333 ILE ILE A . n A 1 318 ASN 318 334 334 ASN ASN A . n A 1 319 GLU 319 335 335 GLU GLU A . n A 1 320 SER 320 336 336 SER SER A . n A 1 321 LYS 321 337 337 LYS LYS A . n A 1 322 TRP 322 338 338 TRP TRP A . n A 1 323 ASN 323 339 339 ASN ASN A . n A 1 324 GLU 324 340 340 GLU GLU A . n A 1 325 THR 325 341 341 THR THR A . n A 1 326 LEU 326 342 342 LEU LEU A . n A 1 327 GLN 327 343 343 GLN GLN A . n A 1 328 ARG 328 344 344 ARG ARG A . n A 1 329 VAL 329 345 345 VAL VAL A . n A 1 330 SER 330 346 346 SER SER A . n A 1 331 LYS 331 347 347 LYS LYS A . n A 1 332 LYS 332 348 348 LYS LYS A . n A 1 333 LEU 333 349 349 LEU LEU A . n A 1 334 LYS 334 350 350 LYS LYS A . n A 1 335 GLU 335 351 351 GLU GLU A . n A 1 336 TYR 336 352 352 TYR TYR A . n A 1 337 PHE 337 353 353 PHE PHE A . n A 1 338 PRO 338 354 354 PRO PRO A . n A 1 339 HIS 339 355 355 HIS HIS A . n A 1 340 LYS 340 356 356 LYS LYS A . n A 1 341 ASN 341 357 357 ASN ASN A . n A 1 342 ILE 342 358 358 ILE ILE A . n A 1 343 THR 343 359 359 THR THR A . n A 1 344 PHE 344 361 361 PHE PHE A . n A 1 345 GLN 345 362 362 GLN GLN A . n A 1 346 PRO 346 363 363 PRO PRO A . n A 1 347 SER 347 364 364 SER SER A . n A 1 348 SER 348 365 365 SER SER A . n A 1 349 GLY 349 366 366 GLY GLY A . n A 1 350 GLY 350 367 367 GLY GLY A . n A 1 351 ASP 351 368 368 ASP ASP A . n A 1 352 LEU 352 369 369 LEU LEU A . n A 1 353 GLU 353 370 370 GLU GLU A . n A 1 354 ILE 354 371 371 ILE ILE A . n A 1 355 THR 355 372 372 THR THR A . n A 1 356 THR 356 373 373 THR THR A . n A 1 357 HIS 357 374 374 HIS HIS A . n A 1 358 SER 358 375 375 SER SER A . n A 1 359 PHE 359 376 376 PHE PHE A . n A 1 360 ASN 360 377 377 ASN ASN A . n A 1 361 CYS 361 378 378 CYS CYS A . n A 1 362 GLY 362 379 379 GLY GLY A . n A 1 363 GLY 363 380 380 GLY GLY A . n A 1 364 GLU 364 381 381 GLU GLU A . n A 1 365 PHE 365 382 382 PHE PHE A . n A 1 366 PHE 366 383 383 PHE PHE A . n A 1 367 TYR 367 384 384 TYR TYR A . n A 1 368 CYS 368 385 385 CYS CYS A . n A 1 369 ASN 369 386 386 ASN ASN A . n A 1 370 THR 370 387 387 THR THR A . n A 1 371 SER 371 388 388 SER SER A . n A 1 372 SER 372 389 389 SER SER A . n A 1 373 LEU 373 390 390 LEU LEU A . n A 1 374 PHE 374 391 391 PHE PHE A . n A 1 375 ASN 375 392 392 ASN ASN A . n A 1 376 ARG 376 393 393 ARG ARG A . n A 1 377 THR 377 394 394 THR THR A . n A 1 378 TYR 378 395 395 TYR TYR A . n A 1 379 MET 379 396 396 MET MET A . n A 1 380 ALA 380 397 397 ALA ALA A . n A 1 381 ASN 381 398 398 ASN ASN A . n A 1 382 SER 382 399 ? ? ? A . n A 1 383 THR 383 400 ? ? ? A . n A 1 384 ASP 384 401 ? ? ? A . n A 1 385 MET 385 402 ? ? ? A . n A 1 386 ALA 386 403 ? ? ? A . n A 1 387 ASN 387 404 ? ? ? A . n A 1 388 SER 388 405 ? ? ? A . n A 1 389 THR 389 406 ? ? ? A . n A 1 390 GLU 390 407 ? ? ? A . n A 1 391 THR 391 408 ? ? ? A . n A 1 392 ASN 392 409 409 ASN ASN A . n A 1 393 SER 393 410 410 SER SER A . n A 1 394 THR 394 411 411 THR THR A . n A 1 395 ARG 395 412 412 ARG ARG A . n A 1 396 THR 396 413 413 THR THR A . n A 1 397 ILE 397 414 414 ILE ILE A . n A 1 398 THR 398 415 415 THR THR A . n A 1 399 ILE 399 416 416 ILE ILE A . n A 1 400 HIS 400 417 417 HIS HIS A . n A 1 401 CYS 401 418 418 CYS CYS A . n A 1 402 ARG 402 419 419 ARG ARG A . n A 1 403 ILE 403 420 420 ILE ILE A . n A 1 404 LYS 404 421 421 LYS LYS A . n A 1 405 GLN 405 422 422 GLN GLN A . n A 1 406 ILE 406 423 423 ILE ILE A . n A 1 407 ILE 407 424 424 ILE ILE A . n A 1 408 ASN 408 425 425 ASN ASN A . n A 1 409 MET 409 426 426 MET MET A . n A 1 410 TRP 410 427 427 TRP TRP A . n A 1 411 GLN 411 428 428 GLN GLN A . n A 1 412 GLU 412 429 429 GLU GLU A . n A 1 413 VAL 413 430 430 VAL VAL A . n A 1 414 GLY 414 431 431 GLY GLY A . n A 1 415 ARG 415 432 432 ARG ARG A . n A 1 416 ALA 416 433 433 ALA ALA A . n A 1 417 MET 417 434 434 MET MET A . n A 1 418 TYR 418 435 435 TYR TYR A . n A 1 419 ALA 419 436 436 ALA ALA A . n A 1 420 PRO 420 437 437 PRO PRO A . n A 1 421 PRO 421 438 438 PRO PRO A . n A 1 422 ILE 422 439 439 ILE ILE A . n A 1 423 ALA 423 440 440 ALA ALA A . n A 1 424 GLY 424 441 441 GLY GLY A . n A 1 425 ASN 425 442 442 ASN ASN A . n A 1 426 ILE 426 443 443 ILE ILE A . n A 1 427 THR 427 444 444 THR THR A . n A 1 428 CYS 428 445 445 CYS CYS A . n A 1 429 ILE 429 446 446 ILE ILE A . n A 1 430 SER 430 447 447 SER SER A . n A 1 431 ASN 431 448 448 ASN ASN A . n A 1 432 ILE 432 449 449 ILE ILE A . n A 1 433 THR 433 450 450 THR THR A . n A 1 434 GLY 434 451 451 GLY GLY A . n A 1 435 LEU 435 452 452 LEU LEU A . n A 1 436 LEU 436 453 453 LEU LEU A . n A 1 437 LEU 437 454 454 LEU LEU A . n A 1 438 THR 438 455 455 THR THR A . n A 1 439 ARG 439 456 456 ARG ARG A . n A 1 440 ASP 440 457 457 ASP ASP A . n A 1 441 GLY 441 458 458 GLY GLY A . n A 1 442 GLY 442 459 459 GLY GLY A . n A 1 443 LYS 443 460 460 LYS LYS A . n A 1 444 ASN 444 461 461 ASN ASN A . n A 1 445 ASN 445 462 462 ASN ASN A . n A 1 446 THR 446 463 463 THR THR A . n A 1 447 GLU 447 464 464 GLU GLU A . n A 1 448 THR 448 465 465 THR THR A . n A 1 449 PHE 449 466 466 PHE PHE A . n A 1 450 ARG 450 467 467 ARG ARG A . n A 1 451 PRO 451 468 468 PRO PRO A . n A 1 452 GLY 452 469 469 GLY GLY A . n A 1 453 GLY 453 470 470 GLY GLY A . n A 1 454 GLY 454 471 471 GLY GLY A . n A 1 455 ASN 455 472 472 ASN ASN A . n A 1 456 MET 456 473 473 MET MET A . n A 1 457 LYS 457 474 474 LYS LYS A . n A 1 458 ASP 458 475 475 ASP ASP A . n A 1 459 ASN 459 476 476 ASN ASN A . n A 1 460 TRP 460 477 477 TRP TRP A . n A 1 461 ARG 461 478 478 ARG ARG A . n A 1 462 SER 462 479 479 SER SER A . n A 1 463 GLU 463 480 480 GLU GLU A . n A 1 464 LEU 464 481 481 LEU LEU A . n A 1 465 TYR 465 482 482 TYR TYR A . n A 1 466 LYS 466 483 483 LYS LYS A . n A 1 467 TYR 467 484 484 TYR TYR A . n A 1 468 LYS 468 485 485 LYS LYS A . n A 1 469 VAL 469 486 486 VAL VAL A . n A 1 470 VAL 470 487 487 VAL VAL A . n A 1 471 LYS 471 488 ? ? ? A . n A 1 472 ILE 472 489 ? ? ? A . n A 1 473 GLU 473 490 ? ? ? A . n A 1 474 PRO 474 491 ? ? ? A . n A 1 475 LEU 475 492 ? ? ? A . n A 1 476 GLY 476 493 ? ? ? A . n A 1 477 VAL 477 494 ? ? ? A . n A 1 478 ALA 478 495 ? ? ? A . n A 1 479 PRO 479 496 ? ? ? A . n A 1 480 THR 480 497 ? ? ? A . n A 1 481 ARG 481 498 ? ? ? A . n A 1 482 CYS 482 499 ? ? ? A . n A 1 483 LYS 483 500 ? ? ? A . n A 1 484 ARG 484 501 ? ? ? A . n A 1 485 ARG 485 502 ? ? ? A . n A 1 486 VAL 486 503 ? ? ? A . n A 1 487 VAL 487 504 ? ? ? A . n A 1 488 GLY 488 505 ? ? ? A . n A 1 489 ARG 489 506 ? ? ? A . n A 1 490 ARG 490 507 ? ? ? A . n A 1 491 ARG 491 508 ? ? ? A . n A 1 492 ARG 492 509 ? ? ? A . n A 1 493 ARG 493 510 ? ? ? A . n A 1 494 ARG 494 511 ? ? ? A . n A 1 495 ALA 495 512 ? ? ? A . n A 1 496 VAL 496 513 ? ? ? A . n A 1 497 GLY 497 514 ? ? ? A . n A 1 498 ILE 498 515 ? ? ? A . n A 1 499 GLY 499 516 ? ? ? A . n A 1 500 ALA 500 517 ? ? ? A . n A 1 501 VAL 501 518 ? ? ? A . n A 1 502 PHE 502 519 ? ? ? A . n A 1 503 LEU 503 520 ? ? ? A . n A 1 504 GLY 504 521 ? ? ? A . n A 1 505 PHE 505 522 ? ? ? A . n A 1 506 LEU 506 523 ? ? ? A . n A 1 507 GLY 507 524 ? ? ? A . n A 1 508 ALA 508 525 ? ? ? A . n A 1 509 ALA 509 526 ? ? ? A . n A 1 510 GLY 510 527 ? ? ? A . n A 1 511 SER 511 528 ? ? ? A . n A 1 512 THR 512 529 ? ? ? A . n A 1 513 MET 513 530 ? ? ? A . n A 1 514 GLY 514 531 ? ? ? A . n A 1 515 ALA 515 532 ? ? ? A . n A 1 516 ALA 516 533 ? ? ? A . n A 1 517 SER 517 534 ? ? ? A . n A 1 518 MET 518 535 ? ? ? A . n A 1 519 THR 519 536 ? ? ? A . n A 1 520 LEU 520 537 ? ? ? A . n A 1 521 THR 521 538 ? ? ? A . n A 1 522 VAL 522 539 ? ? ? A . n A 1 523 GLN 523 540 ? ? ? A . n A 1 524 ALA 524 541 ? ? ? A . n A 1 525 ARG 525 542 ? ? ? A . n A 1 526 ASN 526 543 ? ? ? A . n A 1 527 LEU 527 544 ? ? ? A . n A 1 528 LEU 528 545 ? ? ? A . n A 1 529 SER 529 546 ? ? ? A . n A 1 530 GLY 530 547 ? ? ? A . n A 1 531 ILE 531 548 ? ? ? A . n A 1 532 VAL 532 549 ? ? ? A . n A 1 533 GLN 533 550 ? ? ? A . n A 1 534 GLN 534 551 ? ? ? A . n A 1 535 GLN 535 552 ? ? ? A . n A 1 536 SER 536 553 ? ? ? A . n A 1 537 ASN 537 554 ? ? ? A . n A 1 538 LEU 538 555 ? ? ? A . n A 1 539 LEU 539 556 ? ? ? A . n A 1 540 ARG 540 557 ? ? ? A . n A 1 541 ALA 541 558 ? ? ? A . n A 1 542 PRO 542 559 ? ? ? A . n A 1 543 GLU 543 560 ? ? ? A . n A 1 544 ALA 544 561 ? ? ? A . n A 1 545 GLN 545 562 ? ? ? A . n A 1 546 GLN 546 563 ? ? ? A . n A 1 547 HIS 547 564 ? ? ? A . n A 1 548 LEU 548 565 ? ? ? A . n A 1 549 LEU 549 566 ? ? ? A . n A 1 550 LYS 550 567 ? ? ? A . n A 1 551 LEU 551 568 ? ? ? A . n A 1 552 THR 552 569 ? ? ? A . n A 1 553 VAL 553 570 ? ? ? A . n A 1 554 TRP 554 571 ? ? ? A . n A 1 555 GLY 555 572 ? ? ? A . n A 1 556 ILE 556 573 ? ? ? A . n A 1 557 LYS 557 574 ? ? ? A . n A 1 558 GLN 558 575 ? ? ? A . n A 1 559 LEU 559 576 ? ? ? A . n A 1 560 GLN 560 577 ? ? ? A . n A 1 561 ALA 561 578 ? ? ? A . n A 1 562 ARG 562 579 ? ? ? A . n A 1 563 VAL 563 580 ? ? ? A . n A 1 564 LEU 564 581 ? ? ? A . n A 1 565 ALA 565 582 ? ? ? A . n A 1 566 VAL 566 583 ? ? ? A . n A 1 567 GLU 567 584 ? ? ? A . n A 1 568 ARG 568 585 ? ? ? A . n A 1 569 TYR 569 586 ? ? ? A . n A 1 570 LEU 570 587 ? ? ? A . n A 1 571 ARG 571 588 ? ? ? A . n A 1 572 ASP 572 589 ? ? ? A . n A 1 573 GLN 573 590 ? ? ? A . n A 1 574 GLN 574 591 ? ? ? A . n A 1 575 LEU 575 592 ? ? ? A . n A 1 576 LEU 576 593 ? ? ? A . n A 1 577 GLY 577 594 ? ? ? A . n A 1 578 ILE 578 595 ? ? ? A . n A 1 579 TRP 579 596 ? ? ? A . n A 1 580 GLY 580 597 ? ? ? A . n A 1 581 CYS 581 598 ? ? ? A . n A 1 582 SER 582 599 ? ? ? A . n A 1 583 GLY 583 600 ? ? ? A . n A 1 584 LYS 584 601 ? ? ? A . n A 1 585 LEU 585 602 ? ? ? A . n A 1 586 ILE 586 603 ? ? ? A . n A 1 587 CYS 587 604 ? ? ? A . n A 1 588 CYS 588 605 ? ? ? A . n A 1 589 THR 589 606 ? ? ? A . n A 1 590 ASN 590 607 ? ? ? A . n A 1 591 VAL 591 608 ? ? ? A . n A 1 592 PRO 592 609 ? ? ? A . n A 1 593 TRP 593 610 ? ? ? A . n A 1 594 ASN 594 611 ? ? ? A . n A 1 595 SER 595 612 ? ? ? A . n A 1 596 SER 596 613 ? ? ? A . n A 1 597 TRP 597 614 ? ? ? A . n A 1 598 SER 598 615 ? ? ? A . n A 1 599 ASN 599 616 ? ? ? A . n A 1 600 ARG 600 617 ? ? ? A . n A 1 601 ASN 601 618 ? ? ? A . n A 1 602 LEU 602 619 ? ? ? A . n A 1 603 SER 603 620 ? ? ? A . n A 1 604 GLU 604 621 ? ? ? A . n A 1 605 ILE 605 622 ? ? ? A . n A 1 606 TRP 606 623 ? ? ? A . n A 1 607 ASP 607 624 ? ? ? A . n A 1 608 ASN 608 625 ? ? ? A . n A 1 609 MET 609 626 ? ? ? A . n A 1 610 THR 610 627 ? ? ? A . n A 1 611 TRP 611 628 ? ? ? A . n A 1 612 LEU 612 629 ? ? ? A . n A 1 613 GLN 613 630 ? ? ? A . n A 1 614 TRP 614 631 ? ? ? A . n A 1 615 ASP 615 632 ? ? ? A . n A 1 616 LYS 616 633 ? ? ? A . n A 1 617 GLU 617 634 ? ? ? A . n A 1 618 ILE 618 635 ? ? ? A . n A 1 619 SER 619 636 ? ? ? A . n A 1 620 ASN 620 637 ? ? ? A . n A 1 621 TYR 621 638 ? ? ? A . n A 1 622 THR 622 639 ? ? ? A . n A 1 623 GLN 623 640 ? ? ? A . n A 1 624 ILE 624 641 ? ? ? A . n A 1 625 ILE 625 642 ? ? ? A . n A 1 626 TYR 626 643 ? ? ? A . n A 1 627 GLY 627 644 ? ? ? A . n A 1 628 LEU 628 645 ? ? ? A . n A 1 629 LEU 629 646 ? ? ? A . n A 1 630 GLU 630 647 ? ? ? A . n A 1 631 GLU 631 648 ? ? ? A . n A 1 632 SER 632 649 ? ? ? A . n A 1 633 GLN 633 650 ? ? ? A . n A 1 634 ASN 634 651 ? ? ? A . n A 1 635 GLN 635 652 ? ? ? A . n A 1 636 GLN 636 653 ? ? ? A . n A 1 637 GLU 637 654 ? ? ? A . n A 1 638 LYS 638 655 ? ? ? A . n A 1 639 ASN 639 656 ? ? ? A . n A 1 640 GLU 640 657 ? ? ? A . n A 1 641 GLN 641 658 ? ? ? A . n A 1 642 ASP 642 659 ? ? ? A . n A 1 643 LEU 643 660 ? ? ? A . n A 1 644 LEU 644 661 ? ? ? A . n A 1 645 ALA 645 662 ? ? ? A . n A 1 646 LEU 646 663 ? ? ? A . n A 1 647 ASP 647 664 ? ? ? A . n B 2 1 MET 1 -18 ? ? ? I . n B 2 2 GLY 2 -17 ? ? ? I . n B 2 3 TRP 3 -16 ? ? ? I . n B 2 4 SER 4 -15 ? ? ? I . n B 2 5 CYS 5 -14 ? ? ? I . n B 2 6 ILE 6 -13 ? ? ? I . n B 2 7 ILE 7 -12 ? ? ? I . n B 2 8 LEU 8 -11 ? ? ? I . n B 2 9 PHE 9 -10 ? ? ? I . n B 2 10 LEU 10 -9 ? ? ? I . n B 2 11 VAL 11 -8 ? ? ? I . n B 2 12 ALA 12 -7 ? ? ? I . n B 2 13 THR 13 -6 ? ? ? I . n B 2 14 ALA 14 -5 ? ? ? I . n B 2 15 THR 15 -4 ? ? ? I . n B 2 16 GLY 16 -3 ? ? ? I . n B 2 17 VAL 17 -2 ? ? ? I . n B 2 18 HIS 18 -1 ? ? ? I . n B 2 19 ALA 19 0 ? ? ? I . n B 2 20 GLN 20 1 1 GLN GLN I . n B 2 21 VAL 21 2 2 VAL VAL I . n B 2 22 HIS 22 3 3 HIS HIS I . n B 2 23 LEU 23 4 4 LEU LEU I . n B 2 24 GLU 24 5 5 GLU GLU I . n B 2 25 GLN 25 6 6 GLN GLN I . n B 2 26 SER 26 7 7 SER SER I . n B 2 27 GLY 27 8 8 GLY GLY I . n B 2 28 ALA 28 9 9 ALA ALA I . n B 2 29 GLU 29 10 10 GLU GLU I . n B 2 30 VAL 30 11 11 VAL VAL I . n B 2 31 LYS 31 12 12 LYS LYS I . n B 2 32 GLU 32 13 13 GLU GLU I . n B 2 33 PRO 33 14 14 PRO PRO I . n B 2 34 GLY 34 15 15 GLY GLY I . n B 2 35 SER 35 16 16 SER SER I . n B 2 36 SER 36 17 17 SER SER I . n B 2 37 VAL 37 18 18 VAL VAL I . n B 2 38 ARG 38 19 19 ARG ARG I . n B 2 39 LEU 39 20 20 LEU LEU I . n B 2 40 SER 40 21 21 SER SER I . n B 2 41 CYS 41 22 22 CYS CYS I . n B 2 42 GLU 42 23 23 GLU GLU I . n B 2 43 ALA 43 24 24 ALA ALA I . n B 2 44 SER 44 25 25 SER SER I . n B 2 45 GLY 45 26 26 GLY GLY I . n B 2 46 TYR 46 27 27 TYR TYR I . n B 2 47 THR 47 28 28 THR THR I . n B 2 48 PHE 48 29 29 PHE PHE I . n B 2 49 THR 49 30 30 THR THR I . n B 2 50 ASP 50 31 31 ASP ASP I . n B 2 51 TYR 51 32 32 TYR TYR I . n B 2 52 TYR 52 33 33 TYR TYR I . n B 2 53 ILE 53 34 34 ILE ILE I . n B 2 54 HIS 54 35 35 HIS HIS I . n B 2 55 TRP 55 36 36 TRP TRP I . n B 2 56 VAL 56 37 37 VAL VAL I . n B 2 57 ARG 57 38 38 ARG ARG I . n B 2 58 GLN 58 39 39 GLN GLN I . n B 2 59 SER 59 40 40 SER SER I . n B 2 60 PRO 60 41 41 PRO PRO I . n B 2 61 ARG 61 42 42 ARG ARG I . n B 2 62 GLN 62 43 43 GLN GLN I . n B 2 63 GLY 63 44 44 GLY GLY I . n B 2 64 LEU 64 45 45 LEU LEU I . n B 2 65 GLU 65 46 46 GLU GLU I . n B 2 66 TRP 66 47 47 TRP TRP I . n B 2 67 MET 67 48 48 MET MET I . n B 2 68 GLY 68 49 49 GLY GLY I . n B 2 69 TRP 69 50 50 TRP TRP I . n B 2 70 ILE 70 51 51 ILE ILE I . n B 2 71 ASN 71 52 52 ASN ASN I . n B 2 72 PRO 72 52 52 PRO PRO I A n B 2 73 TYR 73 53 53 TYR TYR I . n B 2 74 TYR 74 54 54 TYR TYR I . n B 2 75 GLY 75 55 55 GLY GLY I . n B 2 76 ASN 76 56 56 ASN ASN I . n B 2 77 THR 77 57 57 THR THR I . n B 2 78 HIS 78 58 58 HIS HIS I . n B 2 79 TYR 79 59 59 TYR TYR I . n B 2 80 ALA 80 60 60 ALA ALA I . n B 2 81 GLU 81 61 61 GLU GLU I . n B 2 82 LYS 82 62 62 LYS LYS I . n B 2 83 PHE 83 63 63 PHE PHE I . n B 2 84 GLN 84 64 64 GLN GLN I . n B 2 85 GLY 85 65 65 GLY GLY I . n B 2 86 ARG 86 66 66 ARG ARG I . n B 2 87 VAL 87 67 67 VAL VAL I . n B 2 88 ALA 88 68 68 ALA ALA I . n B 2 89 MET 89 69 69 MET MET I . n B 2 90 THR 90 70 70 THR THR I . n B 2 91 ARG 91 71 71 ARG ARG I . n B 2 92 ASP 92 72 72 ASP ASP I . n B 2 93 ARG 93 73 73 ARG ARG I . n B 2 94 SER 94 74 74 SER SER I . n B 2 95 THR 95 75 75 THR THR I . n B 2 96 THR 96 76 76 THR THR I . n B 2 97 THR 97 77 77 THR THR I . n B 2 98 ALA 98 78 78 ALA ALA I . n B 2 99 TYR 99 79 79 TYR TYR I . n B 2 100 MET 100 80 80 MET MET I . n B 2 101 ASP 101 81 81 ASP ASP I . n B 2 102 LEU 102 82 82 LEU LEU I . n B 2 103 SER 103 82 82 SER SER I A n B 2 104 SER 104 82 82 SER SER I B n B 2 105 LEU 105 82 82 LEU LEU I C n B 2 106 THR 106 83 83 THR THR I . n B 2 107 SER 107 84 84 SER SER I . n B 2 108 GLU 108 85 85 GLU GLU I . n B 2 109 ASP 109 86 86 ASP ASP I . n B 2 110 THR 110 87 87 THR THR I . n B 2 111 ALA 111 88 88 ALA ALA I . n B 2 112 VAL 112 89 89 VAL VAL I . n B 2 113 TYR 113 90 90 TYR TYR I . n B 2 114 TYR 114 91 91 TYR TYR I . n B 2 115 CYS 115 92 92 CYS CYS I . n B 2 116 ALA 116 93 93 ALA ALA I . n B 2 117 ARG 117 94 94 ARG ARG I . n B 2 118 ASP 118 95 95 ASP ASP I . n B 2 119 GLU 119 96 96 GLU GLU I . n B 2 120 GLY 120 97 97 GLY GLY I . n B 2 121 GLY 121 98 98 GLY GLY I . n B 2 122 SER 122 99 99 SER SER I . n B 2 123 GLY 123 100 100 GLY GLY I . n B 2 124 SER 124 100 100 SER SER I A n B 2 125 TYR 125 100 100 TYR TYR I B n B 2 126 SER 126 100 100 SER SER I C n B 2 127 TYR 127 100 100 TYR TYR I D n B 2 128 PHE 128 100 100 PHE PHE I E n B 2 129 ASP 129 101 101 ASP ASP I . n B 2 130 SER 130 102 102 SER SER I . n B 2 131 TRP 131 103 103 TRP TRP I . n B 2 132 GLY 132 104 104 GLY GLY I . n B 2 133 GLN 133 105 105 GLN GLN I . n B 2 134 GLY 134 106 106 GLY GLY I . n B 2 135 VAL 135 107 107 VAL VAL I . n B 2 136 LEU 136 108 108 LEU LEU I . n B 2 137 VAL 137 109 109 VAL VAL I . n B 2 138 THR 138 110 110 THR THR I . n B 2 139 VAL 139 111 111 VAL VAL I . n B 2 140 SER 140 112 112 SER SER I . n B 2 141 SER 141 113 113 SER SER I . n B 2 142 ALA 142 114 ? ? ? I . n B 2 143 SER 143 115 ? ? ? I . n B 2 144 THR 144 116 ? ? ? I . n B 2 145 LYS 145 117 ? ? ? I . n B 2 146 GLY 146 118 ? ? ? I . n B 2 147 PRO 147 119 ? ? ? I . n B 2 148 SER 148 120 ? ? ? I . n B 2 149 VAL 149 121 ? ? ? I . n B 2 150 PHE 150 122 ? ? ? I . n B 2 151 PRO 151 123 ? ? ? I . n B 2 152 LEU 152 124 ? ? ? I . n B 2 153 ALA 153 125 ? ? ? I . n B 2 154 PRO 154 126 ? ? ? I . n B 2 155 SER 155 127 ? ? ? I . n B 2 156 SER 156 128 ? ? ? I . n B 2 157 ARG 157 129 ? ? ? I . n B 2 158 SER 158 130 ? ? ? I . n B 2 159 THR 159 131 ? ? ? I . n B 2 160 SER 160 132 ? ? ? I . n B 2 161 GLU 161 133 ? ? ? I . n B 2 162 SER 162 134 ? ? ? I . n B 2 163 THR 163 135 ? ? ? I . n B 2 164 ALA 164 136 ? ? ? I . n B 2 165 ALA 165 137 ? ? ? I . n B 2 166 LEU 166 138 ? ? ? I . n B 2 167 GLY 167 139 ? ? ? I . n B 2 168 CYS 168 140 ? ? ? I . n B 2 169 LEU 169 141 ? ? ? I . n B 2 170 VAL 170 142 ? ? ? I . n B 2 171 LYS 171 143 ? ? ? I . n B 2 172 ASP 172 144 ? ? ? I . n B 2 173 TYR 173 145 ? ? ? I . n B 2 174 PHE 174 146 ? ? ? I . n B 2 175 PRO 175 147 ? ? ? I . n B 2 176 GLU 176 148 ? ? ? I . n B 2 177 PRO 177 149 ? ? ? I . n B 2 178 VAL 178 150 ? ? ? I . n B 2 179 THR 179 151 ? ? ? I . n B 2 180 VAL 180 152 ? ? ? I . n B 2 181 SER 181 153 ? ? ? I . n B 2 182 TRP 182 154 ? ? ? I . n B 2 183 ASN 183 155 ? ? ? I . n B 2 184 SER 184 156 ? ? ? I . n B 2 185 GLY 185 157 ? ? ? I . n B 2 186 SER 186 158 ? ? ? I . n B 2 187 LEU 187 159 ? ? ? I . n B 2 188 THR 188 160 ? ? ? I . n B 2 189 SER 189 161 ? ? ? I . n B 2 190 GLY 190 162 ? ? ? I . n B 2 191 VAL 191 163 ? ? ? I . n B 2 192 HIS 192 164 ? ? ? I . n B 2 193 THR 193 165 ? ? ? I . n B 2 194 PHE 194 166 ? ? ? I . n B 2 195 PRO 195 167 ? ? ? I . n B 2 196 ALA 196 168 ? ? ? I . n B 2 197 VAL 197 169 ? ? ? I . n B 2 198 LEU 198 170 ? ? ? I . n B 2 199 GLN 199 171 ? ? ? I . n B 2 200 SER 200 172 ? ? ? I . n B 2 201 SER 201 173 ? ? ? I . n B 2 202 GLY 202 174 ? ? ? I . n B 2 203 LEU 203 175 ? ? ? I . n B 2 204 TYR 204 176 ? ? ? I . n B 2 205 SER 205 177 ? ? ? I . n B 2 206 LEU 206 178 ? ? ? I . n B 2 207 SER 207 179 ? ? ? I . n B 2 208 SER 208 180 ? ? ? I . n B 2 209 VAL 209 181 ? ? ? I . n B 2 210 VAL 210 182 ? ? ? I . n B 2 211 THR 211 183 ? ? ? I . n B 2 212 VAL 212 184 ? ? ? I . n B 2 213 PRO 213 185 ? ? ? I . n B 2 214 SER 214 186 ? ? ? I . n B 2 215 SER 215 187 ? ? ? I . n B 2 216 SER 216 188 ? ? ? I . n B 2 217 LEU 217 189 ? ? ? I . n B 2 218 GLY 218 190 ? ? ? I . n B 2 219 THR 219 191 ? ? ? I . n B 2 220 GLN 220 192 ? ? ? I . n B 2 221 THR 221 193 ? ? ? I . n B 2 222 TYR 222 194 ? ? ? I . n B 2 223 VAL 223 195 ? ? ? I . n B 2 224 CYS 224 196 ? ? ? I . n B 2 225 ASN 225 197 ? ? ? I . n B 2 226 VAL 226 198 ? ? ? I . n B 2 227 ASN 227 199 ? ? ? I . n B 2 228 HIS 228 200 ? ? ? I . n B 2 229 LYS 229 201 ? ? ? I . n B 2 230 PRO 230 202 ? ? ? I . n B 2 231 SER 231 203 ? ? ? I . n B 2 232 ASN 232 204 ? ? ? I . n B 2 233 THR 233 205 ? ? ? I . n B 2 234 LYS 234 206 ? ? ? I . n B 2 235 VAL 235 207 ? ? ? I . n B 2 236 ASP 236 208 ? ? ? I . n B 2 237 LYS 237 209 ? ? ? I . n B 2 238 ARG 238 210 ? ? ? I . n B 2 239 VAL 239 211 ? ? ? I . n B 2 240 GLU 240 212 ? ? ? I . n B 2 241 ILE 241 213 ? ? ? I . n B 2 242 LYS 242 214 ? ? ? I . n B 2 243 THR 243 215 ? ? ? I . n C 3 1 MET 1 -18 ? ? ? J . n C 3 2 GLY 2 -17 ? ? ? J . n C 3 3 TRP 3 -16 ? ? ? J . n C 3 4 SER 4 -15 ? ? ? J . n C 3 5 CYS 5 -14 ? ? ? J . n C 3 6 ILE 6 -13 ? ? ? J . n C 3 7 ILE 7 -12 ? ? ? J . n C 3 8 LEU 8 -11 ? ? ? J . n C 3 9 PHE 9 -10 ? ? ? J . n C 3 10 LEU 10 -9 ? ? ? J . n C 3 11 VAL 11 -8 ? ? ? J . n C 3 12 ALA 12 -7 ? ? ? J . n C 3 13 THR 13 -6 ? ? ? J . n C 3 14 ALA 14 -5 ? ? ? J . n C 3 15 THR 15 -4 ? ? ? J . n C 3 16 GLY 16 -3 ? ? ? J . n C 3 17 VAL 17 -2 ? ? ? J . n C 3 18 HIS 18 -1 ? ? ? J . n C 3 19 ALA 19 0 ? ? ? J . n C 3 20 ASP 20 1 1 ASP ASP J . n C 3 21 ILE 21 2 2 ILE ILE J . n C 3 22 GLN 22 3 3 GLN GLN J . n C 3 23 MET 23 4 4 MET MET J . n C 3 24 THR 24 5 5 THR THR J . n C 3 25 GLN 25 6 6 GLN GLN J . n C 3 26 SER 26 7 7 SER SER J . n C 3 27 PRO 27 8 8 PRO PRO J . n C 3 28 SER 28 9 9 SER SER J . n C 3 29 SER 29 10 10 SER SER J . n C 3 30 LEU 30 11 11 LEU LEU J . n C 3 31 SER 31 12 12 SER SER J . n C 3 32 ALA 32 13 13 ALA ALA J . n C 3 33 SER 33 14 14 SER SER J . n C 3 34 VAL 34 15 15 VAL VAL J . n C 3 35 GLY 35 16 16 GLY GLY J . n C 3 36 ASP 36 17 17 ASP ASP J . n C 3 37 THR 37 18 18 THR THR J . n C 3 38 VAL 38 19 19 VAL VAL J . n C 3 39 THR 39 20 20 THR THR J . n C 3 40 ILE 40 21 21 ILE ILE J . n C 3 41 THR 41 22 22 THR THR J . n C 3 42 CYS 42 23 23 CYS CYS J . n C 3 43 ARG 43 24 24 ARG ARG J . n C 3 44 ALA 44 25 25 ALA ALA J . n C 3 45 SER 45 26 26 SER SER J . n C 3 46 GLN 46 27 27 GLN GLN J . n C 3 47 ASP 47 28 28 ASP ASP J . n C 3 48 ILE 48 29 29 ILE ILE J . n C 3 49 ASN 49 30 30 ASN ASN J . n C 3 50 ASN 50 31 31 ASN ASN J . n C 3 51 HIS 51 32 32 HIS HIS J . n C 3 52 LEU 52 33 33 LEU LEU J . n C 3 53 SER 53 34 34 SER SER J . n C 3 54 TRP 54 35 35 TRP TRP J . n C 3 55 TYR 55 36 36 TYR TYR J . n C 3 56 GLN 56 37 37 GLN GLN J . n C 3 57 GLN 57 38 38 GLN GLN J . n C 3 58 LYS 58 39 39 LYS LYS J . n C 3 59 PRO 59 40 40 PRO PRO J . n C 3 60 GLY 60 41 41 GLY GLY J . n C 3 61 ARG 61 42 42 ARG ARG J . n C 3 62 ALA 62 43 43 ALA ALA J . n C 3 63 PRO 63 44 44 PRO PRO J . n C 3 64 LYS 64 45 45 LYS LYS J . n C 3 65 ALA 65 46 46 ALA ALA J . n C 3 66 LEU 66 47 47 LEU LEU J . n C 3 67 ILE 67 48 48 ILE ILE J . n C 3 68 TYR 68 49 49 TYR TYR J . n C 3 69 SER 69 50 50 SER SER J . n C 3 70 ALA 70 51 51 ALA ALA J . n C 3 71 SER 71 52 52 SER SER J . n C 3 72 SER 72 53 53 SER SER J . n C 3 73 LEU 73 54 54 LEU LEU J . n C 3 74 GLU 74 55 55 GLU GLU J . n C 3 75 THR 75 56 56 THR THR J . n C 3 76 GLY 76 57 57 GLY GLY J . n C 3 77 VAL 77 58 58 VAL VAL J . n C 3 78 PRO 78 59 59 PRO PRO J . n C 3 79 SER 79 60 60 SER SER J . n C 3 80 ARG 80 61 61 ARG ARG J . n C 3 81 PHE 81 62 62 PHE PHE J . n C 3 82 SER 82 63 63 SER SER J . n C 3 83 GLY 83 64 64 GLY GLY J . n C 3 84 SER 84 65 65 SER SER J . n C 3 85 GLY 85 66 66 GLY GLY J . n C 3 86 SER 86 67 67 SER SER J . n C 3 87 GLY 87 68 68 GLY GLY J . n C 3 88 THR 88 69 69 THR THR J . n C 3 89 ASP 89 70 70 ASP ASP J . n C 3 90 TYR 90 71 71 TYR TYR J . n C 3 91 THR 91 72 72 THR THR J . n C 3 92 LEU 92 73 73 LEU LEU J . n C 3 93 THR 93 74 74 THR THR J . n C 3 94 ILE 94 75 75 ILE ILE J . n C 3 95 SER 95 76 76 SER SER J . n C 3 96 SER 96 77 77 SER SER J . n C 3 97 LEU 97 78 78 LEU LEU J . n C 3 98 GLN 98 79 79 GLN GLN J . n C 3 99 PRO 99 80 80 PRO PRO J . n C 3 100 GLU 100 81 81 GLU GLU J . n C 3 101 ASP 101 82 82 ASP ASP J . n C 3 102 PHE 102 83 83 PHE PHE J . n C 3 103 ALA 103 84 84 ALA ALA J . n C 3 104 THR 104 85 85 THR THR J . n C 3 105 TYR 105 86 86 TYR TYR J . n C 3 106 TYR 106 87 87 TYR TYR J . n C 3 107 CYS 107 88 88 CYS CYS J . n C 3 108 GLN 108 89 89 GLN GLN J . n C 3 109 HIS 109 90 90 HIS HIS J . n C 3 110 TYR 110 91 91 TYR TYR J . n C 3 111 SER 111 92 92 SER SER J . n C 3 112 THR 112 93 93 THR THR J . n C 3 113 SER 113 94 94 SER SER J . n C 3 114 PRO 114 95 95 PRO PRO J . n C 3 115 TYR 115 96 96 TYR TYR J . n C 3 116 THR 116 97 97 THR THR J . n C 3 117 PHE 117 98 98 PHE PHE J . n C 3 118 GLY 118 99 99 GLY GLY J . n C 3 119 ARG 119 100 100 ARG ARG J . n C 3 120 GLY 120 101 101 GLY GLY J . n C 3 121 THR 121 102 102 THR THR J . n C 3 122 LYS 122 103 103 LYS LYS J . n C 3 123 VAL 123 104 104 VAL VAL J . n C 3 124 ASP 124 105 105 ASP ASP J . n C 3 125 ILE 125 106 106 ILE ILE J . n C 3 126 LYS 126 107 107 LYS LYS J . n C 3 127 ARG 127 108 ? ? ? J . n C 3 128 ALA 128 109 ? ? ? J . n C 3 129 VAL 129 110 ? ? ? J . n C 3 130 ALA 130 111 ? ? ? J . n C 3 131 ALA 131 112 ? ? ? J . n C 3 132 PRO 132 113 ? ? ? J . n C 3 133 SER 133 114 ? ? ? J . n C 3 134 VAL 134 115 ? ? ? J . n C 3 135 PHE 135 116 ? ? ? J . n C 3 136 ILE 136 117 ? ? ? J . n C 3 137 PHE 137 118 ? ? ? J . n C 3 138 PRO 138 119 ? ? ? J . n C 3 139 PRO 139 120 ? ? ? J . n C 3 140 SER 140 121 ? ? ? J . n C 3 141 GLU 141 122 ? ? ? J . n C 3 142 ASP 142 123 ? ? ? J . n C 3 143 GLN 143 124 ? ? ? J . n C 3 144 VAL 144 125 ? ? ? J . n C 3 145 LYS 145 126 ? ? ? J . n C 3 146 SER 146 127 ? ? ? J . n C 3 147 GLY 147 128 ? ? ? J . n C 3 148 THR 148 129 ? ? ? J . n C 3 149 VAL 149 130 ? ? ? J . n C 3 150 SER 150 131 ? ? ? J . n C 3 151 VAL 151 132 ? ? ? J . n C 3 152 VAL 152 133 ? ? ? J . n C 3 153 CYS 153 134 ? ? ? J . n C 3 154 LEU 154 135 ? ? ? J . n C 3 155 LEU 155 136 ? ? ? J . n C 3 156 ASN 156 137 ? ? ? J . n C 3 157 ASN 157 138 ? ? ? J . n C 3 158 PHE 158 139 ? ? ? J . n C 3 159 TYR 159 140 ? ? ? J . n C 3 160 PRO 160 141 ? ? ? J . n C 3 161 ARG 161 142 ? ? ? J . n C 3 162 GLU 162 143 ? ? ? J . n C 3 163 ALA 163 144 ? ? ? J . n C 3 164 SER 164 145 ? ? ? J . n C 3 165 VAL 165 146 ? ? ? J . n C 3 166 LYS 166 147 ? ? ? J . n C 3 167 TRP 167 148 ? ? ? J . n C 3 168 LYS 168 149 ? ? ? J . n C 3 169 VAL 169 150 ? ? ? J . n C 3 170 ASP 170 151 ? ? ? J . n C 3 171 GLY 171 152 ? ? ? J . n C 3 172 VAL 172 153 ? ? ? J . n C 3 173 LEU 173 154 ? ? ? J . n C 3 174 LYS 174 155 ? ? ? J . n C 3 175 THR 175 156 ? ? ? J . n C 3 176 GLY 176 157 ? ? ? J . n C 3 177 ASN 177 158 ? ? ? J . n C 3 178 SER 178 159 ? ? ? J . n C 3 179 GLN 179 160 ? ? ? J . n C 3 180 GLU 180 161 ? ? ? J . n C 3 181 SER 181 162 ? ? ? J . n C 3 182 VAL 182 163 ? ? ? J . n C 3 183 THR 183 164 ? ? ? J . n C 3 184 GLU 184 165 ? ? ? J . n C 3 185 GLN 185 166 ? ? ? J . n C 3 186 ASP 186 167 ? ? ? J . n C 3 187 SER 187 168 ? ? ? J . n C 3 188 LYS 188 169 ? ? ? J . n C 3 189 ASP 189 170 ? ? ? J . n C 3 190 ASN 190 171 ? ? ? J . n C 3 191 THR 191 172 ? ? ? J . n C 3 192 TYR 192 173 ? ? ? J . n C 3 193 SER 193 174 ? ? ? J . n C 3 194 LEU 194 175 ? ? ? J . n C 3 195 SER 195 176 ? ? ? J . n C 3 196 SER 196 177 ? ? ? J . n C 3 197 THR 197 178 ? ? ? J . n C 3 198 LEU 198 179 ? ? ? J . n C 3 199 THR 199 180 ? ? ? J . n C 3 200 LEU 200 181 ? ? ? J . n C 3 201 SER 201 182 ? ? ? J . n C 3 202 SER 202 183 ? ? ? J . n C 3 203 THR 203 184 ? ? ? J . n C 3 204 ASP 204 185 ? ? ? J . n C 3 205 TYR 205 186 ? ? ? J . n C 3 206 GLN 206 187 ? ? ? J . n C 3 207 SER 207 188 ? ? ? J . n C 3 208 HIS 208 189 ? ? ? J . n C 3 209 ASN 209 190 ? ? ? J . n C 3 210 VAL 210 191 ? ? ? J . n C 3 211 TYR 211 192 ? ? ? J . n C 3 212 ALA 212 193 ? ? ? J . n C 3 213 CYS 213 194 ? ? ? J . n C 3 214 GLU 214 195 ? ? ? J . n C 3 215 VAL 215 196 ? ? ? J . n C 3 216 THR 216 197 ? ? ? J . n C 3 217 HIS 217 198 ? ? ? J . n C 3 218 GLN 218 199 ? ? ? J . n C 3 219 GLY 219 200 ? ? ? J . n C 3 220 LEU 220 201 ? ? ? J . n C 3 221 SER 221 202 ? ? ? J . n C 3 222 SER 222 203 ? ? ? J . n C 3 223 PRO 223 204 ? ? ? J . n C 3 224 VAL 224 205 ? ? ? J . n C 3 225 THR 225 206 ? ? ? J . n C 3 226 LYS 226 207 ? ? ? J . n C 3 227 SER 227 208 ? ? ? J . n C 3 228 PHE 228 209 ? ? ? J . n C 3 229 ASN 229 210 ? ? ? J . n C 3 230 ARG 230 211 ? ? ? J . n C 3 231 GLY 231 212 ? ? ? J . n C 3 232 GLU 232 213 ? ? ? J . n C 3 233 CYS 233 214 ? ? ? J . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 701 _pdbx_nonpoly_scheme.auth_seq_num 607 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8U1D _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8U1D _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8U1D _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8U1D _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.005 ? 5222 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.009 ? 7085 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 6.258 ? 710 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.058 ? 789 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 908 ? f_plane_restr ? ? # _struct.entry_id 8U1D _struct.title ;Cryo-EM structure of vaccine-elicited CD4 binding site antibody DH1285 bound to HIV-1 CH505TFchim.6R.SOSIP.664v4.1 Env Local Refinement ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8U1D _struct_keywords.text ;HIV-1 Vaccine induced neutralizing antibody, CD4 binding site antibody, gp120, DH1285, IgG, rhesus macaques, CH505M5chimer.6R.SOSIP.664v4.1 Env, VIRAL PROTEIN ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8U1D 8U1D ? 1 ? 1 2 PDB 8U1D 8U1D ? 2 ? 1 3 PDB 8U1D 8U1D ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8U1D A 1 ? 647 ? 8U1D 7 ? 664 ? 7 664 2 2 8U1D I 1 ? 243 ? 8U1D -18 ? 215 ? -18 215 3 3 8U1D J 1 ? 233 ? 8U1D -18 ? 214 ? -18 214 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 59 ? ALA A 64 ? VAL A 65 ALA A 70 1 ? 6 HELX_P HELX_P2 AA2 THR A 65 ? ALA A 67 ? THR A 71 ALA A 73 5 ? 3 HELX_P HELX_P3 AA3 ASP A 93 ? SER A 109 ? ASP A 99 SER A 115 1 ? 17 HELX_P HELX_P4 AA4 LEU A 116 ? CYS A 120 ? LEU A 122 CYS A 126 5 ? 5 HELX_P HELX_P5 AA5 ASN A 132 ? ILE A 136 ? ASN A 138 ILE A 142 5 ? 5 HELX_P HELX_P6 AA6 CYS A 190 ? SER A 194 ? CYS A 205 SER A 209 5 ? 5 HELX_P HELX_P7 AA7 ASN A 318 ? LYS A 334 ? ASN A 334 LYS A 350 1 ? 17 HELX_P HELX_P8 AA8 ASP A 351 ? THR A 356 ? ASP A 368 THR A 373 1 ? 6 HELX_P HELX_P9 AA9 SER A 371 ? ASN A 375 ? SER A 388 ASN A 392 5 ? 5 HELX_P HELX_P10 AB1 MET A 456 ? ARG A 461 ? MET A 473 ARG A 478 1 ? 6 HELX_P HELX_P11 AB2 THR B 47 ? TYR B 51 ? THR I 28 TYR I 32 5 ? 5 HELX_P HELX_P12 AB3 THR B 106 ? THR B 110 ? THR I 83 THR I 87 5 ? 5 HELX_P HELX_P13 AB4 GLN C 98 ? PHE C 102 ? GLN J 79 PHE J 83 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 113 SG ? ? ? 1_555 A CYS 190 SG ? ? A CYS 119 A CYS 205 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 120 SG ? ? ? 1_555 A CYS 181 SG ? ? A CYS 126 A CYS 196 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? A CYS 125 SG ? ? ? 1_555 A CYS 142 SG ? ? A CYS 131 A CYS 157 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? A CYS 213 SG ? ? ? 1_555 A CYS 224 SG ? ? A CYS 228 A CYS 239 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf5 disulf ? ? A CYS 281 SG ? ? ? 1_555 A CYS 315 SG ? ? A CYS 296 A CYS 331 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? A CYS 361 SG ? ? ? 1_555 A CYS 428 SG ? ? A CYS 378 A CYS 445 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf7 disulf ? ? A CYS 368 SG ? ? ? 1_555 A CYS 401 SG ? ? A CYS 385 A CYS 418 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf8 disulf ? ? C CYS 42 SG ? ? ? 1_555 C CYS 107 SG ? ? J CYS 23 J CYS 88 1_555 ? ? ? ? ? ? ? 2.042 ? ? covale1 covale one ? A ASN 369 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 386 A NAG 701 1_555 ? ? ? ? ? ? ? 1.423 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 369 ? NAG A 701 ? 1_555 ASN A 386 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 113 ? CYS A 190 ? CYS A 119 ? 1_555 CYS A 205 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 120 ? CYS A 181 ? CYS A 126 ? 1_555 CYS A 196 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 125 ? CYS A 142 ? CYS A 131 ? 1_555 CYS A 157 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 213 ? CYS A 224 ? CYS A 228 ? 1_555 CYS A 239 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 281 ? CYS A 315 ? CYS A 296 ? 1_555 CYS A 331 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 361 ? CYS A 428 ? CYS A 378 ? 1_555 CYS A 445 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS A 368 ? CYS A 401 ? CYS A 385 ? 1_555 CYS A 418 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS C 42 ? CYS C 107 ? CYS J 23 ? 1_555 CYS J 88 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 5 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 7 ? AA7 ? 2 ? AA8 ? 3 ? AA9 ? 4 ? AB1 ? 5 ? AB2 ? 5 ? AB3 ? 4 ? AB4 ? 2 ? AB5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA6 6 7 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 77 ? LEU A 80 ? GLU A 83 LEU A 86 AA1 2 VAL A 227 ? VAL A 230 ? VAL A 242 VAL A 245 AA1 3 ALA A 209 ? CYS A 213 ? ALA A 224 CYS A 228 AA1 4 VAL A 469 ? VAL A 470 ? VAL A 486 VAL A 487 AA2 1 ASN A 86 ? ASN A 88 ? ASN A 92 ASN A 94 AA2 2 THR A 221 ? PRO A 223 ? THR A 236 PRO A 238 AA3 1 GLU A 155 ? ALA A 159 ? GLU A 170 ALA A 174 AA3 2 CYS A 142 ? ILE A 146 ? CYS A 157 ILE A 161 AA3 3 LEU A 123 ? CYS A 125 ? LEU A 129 CYS A 131 AA3 4 GLN A 175 ? LEU A 178 ? GLN A 190 LEU A 193 AA3 5 ILE A 166 ? GLN A 168 ? ILE A 181 GLN A 183 AA4 1 VAL A 185 ? GLN A 188 ? VAL A 200 GLN A 203 AA4 2 ARG A 415 ? TYR A 418 ? ARG A 432 TYR A 435 AA4 3 ILE A 406 ? ILE A 407 ? ILE A 423 ILE A 424 AA5 1 LEU A 244 ? LEU A 246 ? LEU A 259 LEU A 261 AA5 2 ILE A 426 ? LEU A 435 ? ILE A 443 LEU A 452 AA5 3 ILE A 270 ? ARG A 283 ? ILE A 285 ARG A 298 AA5 4 ILE A 256 ? ARG A 258 ? ILE A 271 ARG A 273 AA6 1 LEU A 244 ? LEU A 246 ? LEU A 259 LEU A 261 AA6 2 ILE A 426 ? LEU A 435 ? ILE A 443 LEU A 452 AA6 3 ILE A 270 ? ARG A 283 ? ILE A 285 ARG A 298 AA6 4 ALA A 313 ? ILE A 317 ? ALA A 329 ILE A 333 AA6 5 ILE A 397 ? LYS A 404 ? ILE A 414 LYS A 421 AA6 6 GLU A 364 ? CYS A 368 ? GLU A 381 CYS A 385 AA6 7 HIS A 357 ? CYS A 361 ? HIS A 374 CYS A 378 AA7 1 ASN A 286 ? ILE A 292 ? ASN A 301 ILE A 307 AA7 2 PHE A 300 ? ILE A 307 ? PHE A 317 ILE A 323 AA8 1 ASN A 341 ? PHE A 344 ? ASN A 357 PHE A 361 AA8 2 THR A 446 ? PRO A 451 ? THR A 463 PRO A 468 AA8 3 LEU A 437 ? GLY A 441 ? LEU A 454 GLY A 458 AA9 1 HIS B 22 ? GLN B 25 ? HIS I 3 GLN I 6 AA9 2 SER B 36 ? SER B 44 ? SER I 17 SER I 25 AA9 3 THR B 97 ? SER B 103 A THR I 77 SER I 82 AA9 4 VAL B 87 ? ASP B 92 ? VAL I 67 ASP I 72 AB1 1 THR B 77 ? HIS B 78 ? THR I 57 HIS I 58 AB1 2 LEU B 64 ? ILE B 70 ? LEU I 45 ILE I 51 AB1 3 ILE B 53 ? GLN B 58 ? ILE I 34 GLN I 39 AB1 4 ALA B 111 ? ARG B 117 ? ALA I 88 ARG I 94 AB1 5 SER B 130 ? TRP B 131 ? SER I 102 TRP I 103 AB2 1 THR B 77 ? HIS B 78 ? THR I 57 HIS I 58 AB2 2 LEU B 64 ? ILE B 70 ? LEU I 45 ILE I 51 AB2 3 ILE B 53 ? GLN B 58 ? ILE I 34 GLN I 39 AB2 4 ALA B 111 ? ARG B 117 ? ALA I 88 ARG I 94 AB2 5 VAL B 135 ? VAL B 137 ? VAL I 107 VAL I 109 AB3 1 THR C 24 ? GLN C 25 ? THR J 5 GLN J 6 AB3 2 THR C 37 ? ARG C 43 ? THR J 18 ARG J 24 AB3 3 ASP C 89 ? SER C 95 ? ASP J 70 SER J 76 AB3 4 PHE C 81 ? SER C 86 ? PHE J 62 SER J 67 AB4 1 SER C 29 ? ALA C 32 ? SER J 10 ALA J 13 AB4 2 LYS C 122 ? ILE C 125 ? LYS J 103 ILE J 106 AB5 1 SER C 72 ? LEU C 73 ? SER J 53 LEU J 54 AB5 2 LYS C 64 ? TYR C 68 ? LYS J 45 TYR J 49 AB5 3 LEU C 52 ? GLN C 57 ? LEU J 33 GLN J 38 AB5 4 THR C 104 ? HIS C 109 ? THR J 85 HIS J 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N MET A 78 ? N MET A 84 O THR A 229 ? O THR A 244 AA1 2 3 O SER A 228 ? O SER A 243 N LYS A 212 ? N LYS A 227 AA1 3 4 N ALA A 209 ? N ALA A 224 O VAL A 470 ? O VAL A 487 AA2 1 2 N PHE A 87 ? N PHE A 93 O GLY A 222 ? O GLY A 237 AA3 1 2 O GLU A 155 ? O GLU A 170 N ILE A 146 ? N ILE A 161 AA3 2 3 O SER A 143 ? O SER A 158 N ASN A 124 ? N ASN A 130 AA3 3 4 N LEU A 123 ? N LEU A 129 O TYR A 176 ? O TYR A 191 AA3 4 5 O ARG A 177 ? O ARG A 192 N VAL A 167 ? N VAL A 182 AA4 1 2 N THR A 187 ? N THR A 202 O TYR A 418 ? O TYR A 435 AA4 2 3 O MET A 417 ? O MET A 434 N ILE A 407 ? N ILE A 424 AA5 1 2 N LEU A 245 ? N LEU A 260 O THR A 433 ? O THR A 450 AA5 2 3 O SER A 430 ? O SER A 447 N ILE A 279 ? N ILE A 294 AA5 3 4 O ILE A 270 ? O ILE A 285 N ARG A 258 ? N ARG A 273 AA6 1 2 N LEU A 245 ? N LEU A 260 O THR A 433 ? O THR A 450 AA6 2 3 O SER A 430 ? O SER A 447 N ILE A 279 ? N ILE A 294 AA6 3 4 N THR A 282 ? N THR A 297 O TYR A 314 ? O TYR A 330 AA6 4 5 N ILE A 317 ? N ILE A 333 O ILE A 397 ? O ILE A 414 AA6 5 6 O ARG A 402 ? O ARG A 419 N TYR A 367 ? N TYR A 384 AA6 6 7 O PHE A 366 ? O PHE A 383 N PHE A 359 ? N PHE A 376 AA7 1 2 N THR A 288 ? N THR A 303 O GLY A 304 ? O GLY A 321 AA8 1 2 N ASN A 341 ? N ASN A 357 O GLU A 447 ? O GLU A 464 AA8 2 3 O THR A 448 ? O THR A 465 N ASP A 440 ? N ASP A 457 AA9 1 2 N GLU B 24 ? N GLU I 5 O GLU B 42 ? O GLU I 23 AA9 2 3 N LEU B 39 ? N LEU I 20 O MET B 100 ? O MET I 80 AA9 3 4 O TYR B 99 ? O TYR I 79 N THR B 90 ? N THR I 70 AB1 1 2 O HIS B 78 ? O HIS I 58 N TRP B 69 ? N TRP I 50 AB1 2 3 O ILE B 70 ? O ILE I 51 N ILE B 53 ? N ILE I 34 AB1 3 4 N VAL B 56 ? N VAL I 37 O TYR B 114 ? O TYR I 91 AB1 4 5 N ARG B 117 ? N ARG I 94 O SER B 130 ? O SER I 102 AB2 1 2 O HIS B 78 ? O HIS I 58 N TRP B 69 ? N TRP I 50 AB2 2 3 O ILE B 70 ? O ILE I 51 N ILE B 53 ? N ILE I 34 AB2 3 4 N VAL B 56 ? N VAL I 37 O TYR B 114 ? O TYR I 91 AB2 4 5 N TYR B 113 ? N TYR I 90 O VAL B 135 ? O VAL I 107 AB3 1 2 N THR C 24 ? N THR J 5 O ARG C 43 ? O ARG J 24 AB3 2 3 N ILE C 40 ? N ILE J 21 O LEU C 92 ? O LEU J 73 AB3 3 4 O THR C 93 ? O THR J 74 N SER C 82 ? N SER J 63 AB4 1 2 N LEU C 30 ? N LEU J 11 O ASP C 124 ? O ASP J 105 AB5 1 2 O SER C 72 ? O SER J 53 N TYR C 68 ? N TYR J 49 AB5 2 3 O ILE C 67 ? O ILE J 48 N TRP C 54 ? N TRP J 35 AB5 3 4 N SER C 53 ? N SER J 34 O GLN C 108 ? O GLN J 89 # _pdbx_entry_details.entry_id 8U1D _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 78 ? ? 36.73 56.27 2 1 ASN A 92 ? ? -69.77 98.69 3 1 ASN A 240 ? ? -135.87 -158.41 4 1 SER A 274 ? ? 174.11 -155.58 5 1 LYS A 282 ? ? -125.46 -59.44 6 1 PRO A 354 ? ? -84.58 47.20 7 1 HIS A 355 ? ? -130.95 -35.12 8 1 THR A 387 ? ? 59.78 18.57 9 1 MET A 426 ? ? 59.90 -130.18 10 1 ARG I 42 ? ? 73.97 -6.83 11 1 MET I 48 ? ? -95.23 -60.05 12 1 ASP J 17 ? ? -118.15 -167.29 13 1 GLN J 27 ? ? -127.33 -168.96 14 1 ASN J 30 ? ? 43.81 -133.16 15 1 ALA J 51 ? ? 66.52 -4.30 16 1 SER J 52 ? ? -131.19 -38.36 17 1 SER J 94 ? ? 67.38 -179.83 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8U1D _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8U1D _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.25 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 146444 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'The complex of vaccine elicited CD4 binding site neutralizing antibody DH1285 Fab with CH505M5chimer.6R.SOSIP.664v4.1 Env' 'One of the gp120 protomer bound to DH1285 locally refined to get precise information about the interacting residues.' ? ? '1, 2, 3' 2 1 RECOMBINANT COMPLEX 'Envelope glycoprotein gp120' ? ? ? 1 3 1 RECOMBINANT COMPLEX 'DH1285 Heavy Chain, DH1285 Light Chain' ? ? ? '2, 3' # _em_imaging.entry_id 8U1D _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8U1D _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295 _em_vitrification.instrument 'LEICA EM GP' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8U1D _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 7 ? A MET 1 2 1 Y 1 A PRO 8 ? A PRO 2 3 1 Y 1 A MET 9 ? A MET 3 4 1 Y 1 A GLY 10 ? A GLY 4 5 1 Y 1 A SER 11 ? A SER 5 6 1 Y 1 A LEU 12 ? A LEU 6 7 1 Y 1 A GLN 13 ? A GLN 7 8 1 Y 1 A PRO 14 ? A PRO 8 9 1 Y 1 A LEU 15 ? A LEU 9 10 1 Y 1 A ALA 16 ? A ALA 10 11 1 Y 1 A THR 17 ? A THR 11 12 1 Y 1 A LEU 18 ? A LEU 12 13 1 Y 1 A TYR 19 ? A TYR 13 14 1 Y 1 A LEU 20 ? A LEU 14 15 1 Y 1 A LEU 21 ? A LEU 15 16 1 Y 1 A GLY 22 ? A GLY 16 17 1 Y 1 A MET 23 ? A MET 17 18 1 Y 1 A LEU 24 ? A LEU 18 19 1 Y 1 A VAL 25 ? A VAL 19 20 1 Y 1 A ALA 26 ? A ALA 20 21 1 Y 1 A SER 27 ? A SER 21 22 1 Y 1 A VAL 28 ? A VAL 22 23 1 Y 1 A LEU 29 ? A LEU 23 24 1 Y 1 A ALA 30 ? A ALA 24 25 1 Y 1 A ALA 31 ? A ALA 25 26 1 Y 1 A GLU 32 ? A GLU 26 27 1 Y 1 A ASN 33 ? A ASN 27 28 1 Y 1 A LEU 34 ? A LEU 28 29 1 Y 1 A TRP 35 ? A TRP 29 30 1 Y 1 A VAL 36 ? A VAL 30 31 1 Y 1 A THR 37 ? A THR 31 32 1 Y 1 A VAL 38 ? A VAL 32 33 1 Y 1 A TYR 39 ? A TYR 33 34 1 Y 1 A TYR 40 ? A TYR 34 35 1 Y 1 A GLY 41 ? A GLY 35 36 1 Y 1 A VAL 42 ? A VAL 36 37 1 Y 1 A PRO 43 ? A PRO 37 38 1 Y 1 A VAL 44 ? A VAL 38 39 1 Y 1 A TRP 45 ? A TRP 39 40 1 Y 1 A SER 399 ? A SER 382 41 1 Y 1 A THR 400 ? A THR 383 42 1 Y 1 A ASP 401 ? A ASP 384 43 1 Y 1 A MET 402 ? A MET 385 44 1 Y 1 A ALA 403 ? A ALA 386 45 1 Y 1 A ASN 404 ? A ASN 387 46 1 Y 1 A SER 405 ? A SER 388 47 1 Y 1 A THR 406 ? A THR 389 48 1 Y 1 A GLU 407 ? A GLU 390 49 1 Y 1 A THR 408 ? A THR 391 50 1 Y 1 A LYS 488 ? A LYS 471 51 1 Y 1 A ILE 489 ? A ILE 472 52 1 Y 1 A GLU 490 ? A GLU 473 53 1 Y 1 A PRO 491 ? A PRO 474 54 1 Y 1 A LEU 492 ? A LEU 475 55 1 Y 1 A GLY 493 ? A GLY 476 56 1 Y 1 A VAL 494 ? A VAL 477 57 1 Y 1 A ALA 495 ? A ALA 478 58 1 Y 1 A PRO 496 ? A PRO 479 59 1 Y 1 A THR 497 ? A THR 480 60 1 Y 1 A ARG 498 ? A ARG 481 61 1 Y 1 A CYS 499 ? A CYS 482 62 1 Y 1 A LYS 500 ? A LYS 483 63 1 Y 1 A ARG 501 ? A ARG 484 64 1 Y 1 A ARG 502 ? A ARG 485 65 1 Y 1 A VAL 503 ? A VAL 486 66 1 Y 1 A VAL 504 ? A VAL 487 67 1 Y 1 A GLY 505 ? A GLY 488 68 1 Y 1 A ARG 506 ? A ARG 489 69 1 Y 1 A ARG 507 ? A ARG 490 70 1 Y 1 A ARG 508 ? A ARG 491 71 1 Y 1 A ARG 509 ? A ARG 492 72 1 Y 1 A ARG 510 ? A ARG 493 73 1 Y 1 A ARG 511 ? A ARG 494 74 1 Y 1 A ALA 512 ? A ALA 495 75 1 Y 1 A VAL 513 ? A VAL 496 76 1 Y 1 A GLY 514 ? A GLY 497 77 1 Y 1 A ILE 515 ? A ILE 498 78 1 Y 1 A GLY 516 ? A GLY 499 79 1 Y 1 A ALA 517 ? A ALA 500 80 1 Y 1 A VAL 518 ? A VAL 501 81 1 Y 1 A PHE 519 ? A PHE 502 82 1 Y 1 A LEU 520 ? A LEU 503 83 1 Y 1 A GLY 521 ? A GLY 504 84 1 Y 1 A PHE 522 ? A PHE 505 85 1 Y 1 A LEU 523 ? A LEU 506 86 1 Y 1 A GLY 524 ? A GLY 507 87 1 Y 1 A ALA 525 ? A ALA 508 88 1 Y 1 A ALA 526 ? A ALA 509 89 1 Y 1 A GLY 527 ? A GLY 510 90 1 Y 1 A SER 528 ? A SER 511 91 1 Y 1 A THR 529 ? A THR 512 92 1 Y 1 A MET 530 ? A MET 513 93 1 Y 1 A GLY 531 ? A GLY 514 94 1 Y 1 A ALA 532 ? A ALA 515 95 1 Y 1 A ALA 533 ? A ALA 516 96 1 Y 1 A SER 534 ? A SER 517 97 1 Y 1 A MET 535 ? A MET 518 98 1 Y 1 A THR 536 ? A THR 519 99 1 Y 1 A LEU 537 ? A LEU 520 100 1 Y 1 A THR 538 ? A THR 521 101 1 Y 1 A VAL 539 ? A VAL 522 102 1 Y 1 A GLN 540 ? A GLN 523 103 1 Y 1 A ALA 541 ? A ALA 524 104 1 Y 1 A ARG 542 ? A ARG 525 105 1 Y 1 A ASN 543 ? A ASN 526 106 1 Y 1 A LEU 544 ? A LEU 527 107 1 Y 1 A LEU 545 ? A LEU 528 108 1 Y 1 A SER 546 ? A SER 529 109 1 Y 1 A GLY 547 ? A GLY 530 110 1 Y 1 A ILE 548 ? A ILE 531 111 1 Y 1 A VAL 549 ? A VAL 532 112 1 Y 1 A GLN 550 ? A GLN 533 113 1 Y 1 A GLN 551 ? A GLN 534 114 1 Y 1 A GLN 552 ? A GLN 535 115 1 Y 1 A SER 553 ? A SER 536 116 1 Y 1 A ASN 554 ? A ASN 537 117 1 Y 1 A LEU 555 ? A LEU 538 118 1 Y 1 A LEU 556 ? A LEU 539 119 1 Y 1 A ARG 557 ? A ARG 540 120 1 Y 1 A ALA 558 ? A ALA 541 121 1 Y 1 A PRO 559 ? A PRO 542 122 1 Y 1 A GLU 560 ? A GLU 543 123 1 Y 1 A ALA 561 ? A ALA 544 124 1 Y 1 A GLN 562 ? A GLN 545 125 1 Y 1 A GLN 563 ? A GLN 546 126 1 Y 1 A HIS 564 ? A HIS 547 127 1 Y 1 A LEU 565 ? A LEU 548 128 1 Y 1 A LEU 566 ? A LEU 549 129 1 Y 1 A LYS 567 ? A LYS 550 130 1 Y 1 A LEU 568 ? A LEU 551 131 1 Y 1 A THR 569 ? A THR 552 132 1 Y 1 A VAL 570 ? A VAL 553 133 1 Y 1 A TRP 571 ? A TRP 554 134 1 Y 1 A GLY 572 ? A GLY 555 135 1 Y 1 A ILE 573 ? A ILE 556 136 1 Y 1 A LYS 574 ? A LYS 557 137 1 Y 1 A GLN 575 ? A GLN 558 138 1 Y 1 A LEU 576 ? A LEU 559 139 1 Y 1 A GLN 577 ? A GLN 560 140 1 Y 1 A ALA 578 ? A ALA 561 141 1 Y 1 A ARG 579 ? A ARG 562 142 1 Y 1 A VAL 580 ? A VAL 563 143 1 Y 1 A LEU 581 ? A LEU 564 144 1 Y 1 A ALA 582 ? A ALA 565 145 1 Y 1 A VAL 583 ? A VAL 566 146 1 Y 1 A GLU 584 ? A GLU 567 147 1 Y 1 A ARG 585 ? A ARG 568 148 1 Y 1 A TYR 586 ? A TYR 569 149 1 Y 1 A LEU 587 ? A LEU 570 150 1 Y 1 A ARG 588 ? A ARG 571 151 1 Y 1 A ASP 589 ? A ASP 572 152 1 Y 1 A GLN 590 ? A GLN 573 153 1 Y 1 A GLN 591 ? A GLN 574 154 1 Y 1 A LEU 592 ? A LEU 575 155 1 Y 1 A LEU 593 ? A LEU 576 156 1 Y 1 A GLY 594 ? A GLY 577 157 1 Y 1 A ILE 595 ? A ILE 578 158 1 Y 1 A TRP 596 ? A TRP 579 159 1 Y 1 A GLY 597 ? A GLY 580 160 1 Y 1 A CYS 598 ? A CYS 581 161 1 Y 1 A SER 599 ? A SER 582 162 1 Y 1 A GLY 600 ? A GLY 583 163 1 Y 1 A LYS 601 ? A LYS 584 164 1 Y 1 A LEU 602 ? A LEU 585 165 1 Y 1 A ILE 603 ? A ILE 586 166 1 Y 1 A CYS 604 ? A CYS 587 167 1 Y 1 A CYS 605 ? A CYS 588 168 1 Y 1 A THR 606 ? A THR 589 169 1 Y 1 A ASN 607 ? A ASN 590 170 1 Y 1 A VAL 608 ? A VAL 591 171 1 Y 1 A PRO 609 ? A PRO 592 172 1 Y 1 A TRP 610 ? A TRP 593 173 1 Y 1 A ASN 611 ? A ASN 594 174 1 Y 1 A SER 612 ? A SER 595 175 1 Y 1 A SER 613 ? A SER 596 176 1 Y 1 A TRP 614 ? A TRP 597 177 1 Y 1 A SER 615 ? A SER 598 178 1 Y 1 A ASN 616 ? A ASN 599 179 1 Y 1 A ARG 617 ? A ARG 600 180 1 Y 1 A ASN 618 ? A ASN 601 181 1 Y 1 A LEU 619 ? A LEU 602 182 1 Y 1 A SER 620 ? A SER 603 183 1 Y 1 A GLU 621 ? A GLU 604 184 1 Y 1 A ILE 622 ? A ILE 605 185 1 Y 1 A TRP 623 ? A TRP 606 186 1 Y 1 A ASP 624 ? A ASP 607 187 1 Y 1 A ASN 625 ? A ASN 608 188 1 Y 1 A MET 626 ? A MET 609 189 1 Y 1 A THR 627 ? A THR 610 190 1 Y 1 A TRP 628 ? A TRP 611 191 1 Y 1 A LEU 629 ? A LEU 612 192 1 Y 1 A GLN 630 ? A GLN 613 193 1 Y 1 A TRP 631 ? A TRP 614 194 1 Y 1 A ASP 632 ? A ASP 615 195 1 Y 1 A LYS 633 ? A LYS 616 196 1 Y 1 A GLU 634 ? A GLU 617 197 1 Y 1 A ILE 635 ? A ILE 618 198 1 Y 1 A SER 636 ? A SER 619 199 1 Y 1 A ASN 637 ? A ASN 620 200 1 Y 1 A TYR 638 ? A TYR 621 201 1 Y 1 A THR 639 ? A THR 622 202 1 Y 1 A GLN 640 ? A GLN 623 203 1 Y 1 A ILE 641 ? A ILE 624 204 1 Y 1 A ILE 642 ? A ILE 625 205 1 Y 1 A TYR 643 ? A TYR 626 206 1 Y 1 A GLY 644 ? A GLY 627 207 1 Y 1 A LEU 645 ? A LEU 628 208 1 Y 1 A LEU 646 ? A LEU 629 209 1 Y 1 A GLU 647 ? A GLU 630 210 1 Y 1 A GLU 648 ? A GLU 631 211 1 Y 1 A SER 649 ? A SER 632 212 1 Y 1 A GLN 650 ? A GLN 633 213 1 Y 1 A ASN 651 ? A ASN 634 214 1 Y 1 A GLN 652 ? A GLN 635 215 1 Y 1 A GLN 653 ? A GLN 636 216 1 Y 1 A GLU 654 ? A GLU 637 217 1 Y 1 A LYS 655 ? A LYS 638 218 1 Y 1 A ASN 656 ? A ASN 639 219 1 Y 1 A GLU 657 ? A GLU 640 220 1 Y 1 A GLN 658 ? A GLN 641 221 1 Y 1 A ASP 659 ? A ASP 642 222 1 Y 1 A LEU 660 ? A LEU 643 223 1 Y 1 A LEU 661 ? A LEU 644 224 1 Y 1 A ALA 662 ? A ALA 645 225 1 Y 1 A LEU 663 ? A LEU 646 226 1 Y 1 A ASP 664 ? A ASP 647 227 1 Y 1 I MET -18 ? B MET 1 228 1 Y 1 I GLY -17 ? B GLY 2 229 1 Y 1 I TRP -16 ? B TRP 3 230 1 Y 1 I SER -15 ? B SER 4 231 1 Y 1 I CYS -14 ? B CYS 5 232 1 Y 1 I ILE -13 ? B ILE 6 233 1 Y 1 I ILE -12 ? B ILE 7 234 1 Y 1 I LEU -11 ? B LEU 8 235 1 Y 1 I PHE -10 ? B PHE 9 236 1 Y 1 I LEU -9 ? B LEU 10 237 1 Y 1 I VAL -8 ? B VAL 11 238 1 Y 1 I ALA -7 ? B ALA 12 239 1 Y 1 I THR -6 ? B THR 13 240 1 Y 1 I ALA -5 ? B ALA 14 241 1 Y 1 I THR -4 ? B THR 15 242 1 Y 1 I GLY -3 ? B GLY 16 243 1 Y 1 I VAL -2 ? B VAL 17 244 1 Y 1 I HIS -1 ? B HIS 18 245 1 Y 1 I ALA 0 ? B ALA 19 246 1 Y 1 I ALA 114 ? B ALA 142 247 1 Y 1 I SER 115 ? B SER 143 248 1 Y 1 I THR 116 ? B THR 144 249 1 Y 1 I LYS 117 ? B LYS 145 250 1 Y 1 I GLY 118 ? B GLY 146 251 1 Y 1 I PRO 119 ? B PRO 147 252 1 Y 1 I SER 120 ? B SER 148 253 1 Y 1 I VAL 121 ? B VAL 149 254 1 Y 1 I PHE 122 ? B PHE 150 255 1 Y 1 I PRO 123 ? B PRO 151 256 1 Y 1 I LEU 124 ? B LEU 152 257 1 Y 1 I ALA 125 ? B ALA 153 258 1 Y 1 I PRO 126 ? B PRO 154 259 1 Y 1 I SER 127 ? B SER 155 260 1 Y 1 I SER 128 ? B SER 156 261 1 Y 1 I ARG 129 ? B ARG 157 262 1 Y 1 I SER 130 ? B SER 158 263 1 Y 1 I THR 131 ? B THR 159 264 1 Y 1 I SER 132 ? B SER 160 265 1 Y 1 I GLU 133 ? B GLU 161 266 1 Y 1 I SER 134 ? B SER 162 267 1 Y 1 I THR 135 ? B THR 163 268 1 Y 1 I ALA 136 ? B ALA 164 269 1 Y 1 I ALA 137 ? B ALA 165 270 1 Y 1 I LEU 138 ? B LEU 166 271 1 Y 1 I GLY 139 ? B GLY 167 272 1 Y 1 I CYS 140 ? B CYS 168 273 1 Y 1 I LEU 141 ? B LEU 169 274 1 Y 1 I VAL 142 ? B VAL 170 275 1 Y 1 I LYS 143 ? B LYS 171 276 1 Y 1 I ASP 144 ? B ASP 172 277 1 Y 1 I TYR 145 ? B TYR 173 278 1 Y 1 I PHE 146 ? B PHE 174 279 1 Y 1 I PRO 147 ? B PRO 175 280 1 Y 1 I GLU 148 ? B GLU 176 281 1 Y 1 I PRO 149 ? B PRO 177 282 1 Y 1 I VAL 150 ? B VAL 178 283 1 Y 1 I THR 151 ? B THR 179 284 1 Y 1 I VAL 152 ? B VAL 180 285 1 Y 1 I SER 153 ? B SER 181 286 1 Y 1 I TRP 154 ? B TRP 182 287 1 Y 1 I ASN 155 ? B ASN 183 288 1 Y 1 I SER 156 ? B SER 184 289 1 Y 1 I GLY 157 ? B GLY 185 290 1 Y 1 I SER 158 ? B SER 186 291 1 Y 1 I LEU 159 ? B LEU 187 292 1 Y 1 I THR 160 ? B THR 188 293 1 Y 1 I SER 161 ? B SER 189 294 1 Y 1 I GLY 162 ? B GLY 190 295 1 Y 1 I VAL 163 ? B VAL 191 296 1 Y 1 I HIS 164 ? B HIS 192 297 1 Y 1 I THR 165 ? B THR 193 298 1 Y 1 I PHE 166 ? B PHE 194 299 1 Y 1 I PRO 167 ? B PRO 195 300 1 Y 1 I ALA 168 ? B ALA 196 301 1 Y 1 I VAL 169 ? B VAL 197 302 1 Y 1 I LEU 170 ? B LEU 198 303 1 Y 1 I GLN 171 ? B GLN 199 304 1 Y 1 I SER 172 ? B SER 200 305 1 Y 1 I SER 173 ? B SER 201 306 1 Y 1 I GLY 174 ? B GLY 202 307 1 Y 1 I LEU 175 ? B LEU 203 308 1 Y 1 I TYR 176 ? B TYR 204 309 1 Y 1 I SER 177 ? B SER 205 310 1 Y 1 I LEU 178 ? B LEU 206 311 1 Y 1 I SER 179 ? B SER 207 312 1 Y 1 I SER 180 ? B SER 208 313 1 Y 1 I VAL 181 ? B VAL 209 314 1 Y 1 I VAL 182 ? B VAL 210 315 1 Y 1 I THR 183 ? B THR 211 316 1 Y 1 I VAL 184 ? B VAL 212 317 1 Y 1 I PRO 185 ? B PRO 213 318 1 Y 1 I SER 186 ? B SER 214 319 1 Y 1 I SER 187 ? B SER 215 320 1 Y 1 I SER 188 ? B SER 216 321 1 Y 1 I LEU 189 ? B LEU 217 322 1 Y 1 I GLY 190 ? B GLY 218 323 1 Y 1 I THR 191 ? B THR 219 324 1 Y 1 I GLN 192 ? B GLN 220 325 1 Y 1 I THR 193 ? B THR 221 326 1 Y 1 I TYR 194 ? B TYR 222 327 1 Y 1 I VAL 195 ? B VAL 223 328 1 Y 1 I CYS 196 ? B CYS 224 329 1 Y 1 I ASN 197 ? B ASN 225 330 1 Y 1 I VAL 198 ? B VAL 226 331 1 Y 1 I ASN 199 ? B ASN 227 332 1 Y 1 I HIS 200 ? B HIS 228 333 1 Y 1 I LYS 201 ? B LYS 229 334 1 Y 1 I PRO 202 ? B PRO 230 335 1 Y 1 I SER 203 ? B SER 231 336 1 Y 1 I ASN 204 ? B ASN 232 337 1 Y 1 I THR 205 ? B THR 233 338 1 Y 1 I LYS 206 ? B LYS 234 339 1 Y 1 I VAL 207 ? B VAL 235 340 1 Y 1 I ASP 208 ? B ASP 236 341 1 Y 1 I LYS 209 ? B LYS 237 342 1 Y 1 I ARG 210 ? B ARG 238 343 1 Y 1 I VAL 211 ? B VAL 239 344 1 Y 1 I GLU 212 ? B GLU 240 345 1 Y 1 I ILE 213 ? B ILE 241 346 1 Y 1 I LYS 214 ? B LYS 242 347 1 Y 1 I THR 215 ? B THR 243 348 1 Y 1 J MET -18 ? C MET 1 349 1 Y 1 J GLY -17 ? C GLY 2 350 1 Y 1 J TRP -16 ? C TRP 3 351 1 Y 1 J SER -15 ? C SER 4 352 1 Y 1 J CYS -14 ? C CYS 5 353 1 Y 1 J ILE -13 ? C ILE 6 354 1 Y 1 J ILE -12 ? C ILE 7 355 1 Y 1 J LEU -11 ? C LEU 8 356 1 Y 1 J PHE -10 ? C PHE 9 357 1 Y 1 J LEU -9 ? C LEU 10 358 1 Y 1 J VAL -8 ? C VAL 11 359 1 Y 1 J ALA -7 ? C ALA 12 360 1 Y 1 J THR -6 ? C THR 13 361 1 Y 1 J ALA -5 ? C ALA 14 362 1 Y 1 J THR -4 ? C THR 15 363 1 Y 1 J GLY -3 ? C GLY 16 364 1 Y 1 J VAL -2 ? C VAL 17 365 1 Y 1 J HIS -1 ? C HIS 18 366 1 Y 1 J ALA 0 ? C ALA 19 367 1 Y 1 J ARG 108 ? C ARG 127 368 1 Y 1 J ALA 109 ? C ALA 128 369 1 Y 1 J VAL 110 ? C VAL 129 370 1 Y 1 J ALA 111 ? C ALA 130 371 1 Y 1 J ALA 112 ? C ALA 131 372 1 Y 1 J PRO 113 ? C PRO 132 373 1 Y 1 J SER 114 ? C SER 133 374 1 Y 1 J VAL 115 ? C VAL 134 375 1 Y 1 J PHE 116 ? C PHE 135 376 1 Y 1 J ILE 117 ? C ILE 136 377 1 Y 1 J PHE 118 ? C PHE 137 378 1 Y 1 J PRO 119 ? C PRO 138 379 1 Y 1 J PRO 120 ? C PRO 139 380 1 Y 1 J SER 121 ? C SER 140 381 1 Y 1 J GLU 122 ? C GLU 141 382 1 Y 1 J ASP 123 ? C ASP 142 383 1 Y 1 J GLN 124 ? C GLN 143 384 1 Y 1 J VAL 125 ? C VAL 144 385 1 Y 1 J LYS 126 ? C LYS 145 386 1 Y 1 J SER 127 ? C SER 146 387 1 Y 1 J GLY 128 ? C GLY 147 388 1 Y 1 J THR 129 ? C THR 148 389 1 Y 1 J VAL 130 ? C VAL 149 390 1 Y 1 J SER 131 ? C SER 150 391 1 Y 1 J VAL 132 ? C VAL 151 392 1 Y 1 J VAL 133 ? C VAL 152 393 1 Y 1 J CYS 134 ? C CYS 153 394 1 Y 1 J LEU 135 ? C LEU 154 395 1 Y 1 J LEU 136 ? C LEU 155 396 1 Y 1 J ASN 137 ? C ASN 156 397 1 Y 1 J ASN 138 ? C ASN 157 398 1 Y 1 J PHE 139 ? C PHE 158 399 1 Y 1 J TYR 140 ? C TYR 159 400 1 Y 1 J PRO 141 ? C PRO 160 401 1 Y 1 J ARG 142 ? C ARG 161 402 1 Y 1 J GLU 143 ? C GLU 162 403 1 Y 1 J ALA 144 ? C ALA 163 404 1 Y 1 J SER 145 ? C SER 164 405 1 Y 1 J VAL 146 ? C VAL 165 406 1 Y 1 J LYS 147 ? C LYS 166 407 1 Y 1 J TRP 148 ? C TRP 167 408 1 Y 1 J LYS 149 ? C LYS 168 409 1 Y 1 J VAL 150 ? C VAL 169 410 1 Y 1 J ASP 151 ? C ASP 170 411 1 Y 1 J GLY 152 ? C GLY 171 412 1 Y 1 J VAL 153 ? C VAL 172 413 1 Y 1 J LEU 154 ? C LEU 173 414 1 Y 1 J LYS 155 ? C LYS 174 415 1 Y 1 J THR 156 ? C THR 175 416 1 Y 1 J GLY 157 ? C GLY 176 417 1 Y 1 J ASN 158 ? C ASN 177 418 1 Y 1 J SER 159 ? C SER 178 419 1 Y 1 J GLN 160 ? C GLN 179 420 1 Y 1 J GLU 161 ? C GLU 180 421 1 Y 1 J SER 162 ? C SER 181 422 1 Y 1 J VAL 163 ? C VAL 182 423 1 Y 1 J THR 164 ? C THR 183 424 1 Y 1 J GLU 165 ? C GLU 184 425 1 Y 1 J GLN 166 ? C GLN 185 426 1 Y 1 J ASP 167 ? C ASP 186 427 1 Y 1 J SER 168 ? C SER 187 428 1 Y 1 J LYS 169 ? C LYS 188 429 1 Y 1 J ASP 170 ? C ASP 189 430 1 Y 1 J ASN 171 ? C ASN 190 431 1 Y 1 J THR 172 ? C THR 191 432 1 Y 1 J TYR 173 ? C TYR 192 433 1 Y 1 J SER 174 ? C SER 193 434 1 Y 1 J LEU 175 ? C LEU 194 435 1 Y 1 J SER 176 ? C SER 195 436 1 Y 1 J SER 177 ? C SER 196 437 1 Y 1 J THR 178 ? C THR 197 438 1 Y 1 J LEU 179 ? C LEU 198 439 1 Y 1 J THR 180 ? C THR 199 440 1 Y 1 J LEU 181 ? C LEU 200 441 1 Y 1 J SER 182 ? C SER 201 442 1 Y 1 J SER 183 ? C SER 202 443 1 Y 1 J THR 184 ? C THR 203 444 1 Y 1 J ASP 185 ? C ASP 204 445 1 Y 1 J TYR 186 ? C TYR 205 446 1 Y 1 J GLN 187 ? C GLN 206 447 1 Y 1 J SER 188 ? C SER 207 448 1 Y 1 J HIS 189 ? C HIS 208 449 1 Y 1 J ASN 190 ? C ASN 209 450 1 Y 1 J VAL 191 ? C VAL 210 451 1 Y 1 J TYR 192 ? C TYR 211 452 1 Y 1 J ALA 193 ? C ALA 212 453 1 Y 1 J CYS 194 ? C CYS 213 454 1 Y 1 J GLU 195 ? C GLU 214 455 1 Y 1 J VAL 196 ? C VAL 215 456 1 Y 1 J THR 197 ? C THR 216 457 1 Y 1 J HIS 198 ? C HIS 217 458 1 Y 1 J GLN 199 ? C GLN 218 459 1 Y 1 J GLY 200 ? C GLY 219 460 1 Y 1 J LEU 201 ? C LEU 220 461 1 Y 1 J SER 202 ? C SER 221 462 1 Y 1 J SER 203 ? C SER 222 463 1 Y 1 J PRO 204 ? C PRO 223 464 1 Y 1 J VAL 205 ? C VAL 224 465 1 Y 1 J THR 206 ? C THR 225 466 1 Y 1 J LYS 207 ? C LYS 226 467 1 Y 1 J SER 208 ? C SER 227 468 1 Y 1 J PHE 209 ? C PHE 228 469 1 Y 1 J ASN 210 ? C ASN 229 470 1 Y 1 J ARG 211 ? C ARG 230 471 1 Y 1 J GLY 212 ? C GLY 231 472 1 Y 1 J GLU 213 ? C GLU 232 473 1 Y 1 J CYS 214 ? C CYS 233 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2023-08-31 _em_admin.deposition_site RCSB _em_admin.entry_id 8U1D _em_admin.last_update 2025-06-04 _em_admin.map_release_date 2024-01-03 _em_admin.title ;Cryo-EM structure of vaccine-elicited CD4 binding site antibody DH1285 bound to HIV-1 CH505TFchim.6R.SOSIP.664v4.1 Env Local Refinement ; # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag ? _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.308 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 1 11676 'Human immunodeficiency virus 1' ? ? ? ? ? ? ? 3 2 9544 'Macaca mulatta' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 1 9606 'Homo sapiens' ? ? ? 3 2 9606 'Homo sapiens' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 59.1 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 14427340 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? CLASSIFICATION ? 11 1 ? ? cryoSPARC ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'R01 AI145687' 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'UM1 AI144371' 2 # _atom_sites.entry_id 8U1D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #