HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 04-SEP-23 8U1Y
TITLE E.COLI DSBA IN COMPLEX WITH N-(4-(THIOPHEN-3-YL)BENZYL)CYCLOHEXANAMINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA;
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12;
SOURCE 3 ORGANISM_TAXID: 83333;
SOURCE 4 GENE: DSBA, DSF, PPFA, B3860, JW3832;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008
KEYWDS INHIBITOR, COMPLEX, DISULFIDE OXIDOREDUCTASE, FRAGMENTS,
KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX, OXIDOREDUCTASE,
KEYWDS 3 OXIDOREDUCTASE-INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR G.WANG,B.HERAS
REVDAT 2 13-NOV-24 8U1Y 1 REMARK
REVDAT 1 11-SEP-24 8U1Y 0
JRNL AUTH G.WANG,B.HERAS
JRNL TITL TWO-MODE INHIBITION OF DSBA: COMBINATION OF TWO
JRNL TITL 2 SITE-SPECIFIC INHIBITORS ENHANCES VIRULENCE INHIBITION IN
JRNL TITL 3 SALMONELLA ENTERICA SEROVAR TYPHIMURIUM
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.74 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.17.1_3660
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.41
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2
REMARK 3 NUMBER OF REFLECTIONS : 46246
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.170
REMARK 3 R VALUE (WORKING SET) : 0.168
REMARK 3 FREE R VALUE : 0.202
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.280
REMARK 3 FREE R VALUE TEST SET COUNT : 2442
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 33.4100 - 4.4700 0.99 2645 149 0.1517 0.1735
REMARK 3 2 4.4700 - 3.5500 0.99 2580 149 0.1365 0.1693
REMARK 3 3 3.5500 - 3.1000 0.99 2569 158 0.1661 0.2039
REMARK 3 4 3.1000 - 2.8200 0.99 2593 126 0.1724 0.2278
REMARK 3 5 2.8200 - 2.6100 0.99 2545 181 0.1765 0.1897
REMARK 3 6 2.6100 - 2.4600 1.00 2604 124 0.1768 0.2086
REMARK 3 7 2.4600 - 2.3400 1.00 2588 157 0.1738 0.2167
REMARK 3 8 2.3400 - 2.2300 1.00 2590 144 0.1747 0.2308
REMARK 3 9 2.2300 - 2.1500 1.00 2544 170 0.1737 0.2102
REMARK 3 10 2.1500 - 2.0700 1.00 2570 156 0.1841 0.2054
REMARK 3 11 2.0700 - 2.0100 1.00 2575 142 0.1849 0.2221
REMARK 3 12 2.0100 - 1.9500 1.00 2620 117 0.1943 0.2224
REMARK 3 13 1.9500 - 1.9000 1.00 2601 139 0.1971 0.2540
REMARK 3 14 1.9000 - 1.8500 1.00 2559 129 0.2027 0.2497
REMARK 3 15 1.8500 - 1.8100 1.00 2565 147 0.2103 0.2614
REMARK 3 16 1.8100 - 1.7700 1.00 2627 138 0.2148 0.2610
REMARK 3 17 1.7700 - 1.7400 0.93 2429 116 0.2642 0.3203
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.110
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.012 3050
REMARK 3 ANGLE : 1.077 4125
REMARK 3 CHIRALITY : 0.065 446
REMARK 3 PLANARITY : 0.007 537
REMARK 3 DIHEDRAL : 16.653 408
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 7
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 49 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.9623 -11.0771 0.0284
REMARK 3 T TENSOR
REMARK 3 T11: 0.2525 T22: 0.1953
REMARK 3 T33: 0.1739 T12: -0.0256
REMARK 3 T13: -0.0068 T23: 0.0064
REMARK 3 L TENSOR
REMARK 3 L11: 1.4476 L22: 3.4182
REMARK 3 L33: 2.1907 L12: 0.3474
REMARK 3 L13: 1.4806 L23: 2.2870
REMARK 3 S TENSOR
REMARK 3 S11: -0.0221 S12: 0.2092 S13: 0.0159
REMARK 3 S21: -0.4638 S22: 0.0378 S23: 0.0009
REMARK 3 S31: -0.2648 S32: 0.1414 S33: -0.0280
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 65 )
REMARK 3 ORIGIN FOR THE GROUP (A): 36.7042 -7.9343 4.2152
REMARK 3 T TENSOR
REMARK 3 T11: 0.2043 T22: 0.1934
REMARK 3 T33: 0.1825 T12: -0.0197
REMARK 3 T13: 0.0190 T23: 0.0294
REMARK 3 L TENSOR
REMARK 3 L11: 2.4704 L22: 4.7787
REMARK 3 L33: 4.6854 L12: 2.8794
REMARK 3 L13: 0.7973 L23: 2.2951
REMARK 3 S TENSOR
REMARK 3 S11: -0.2456 S12: -0.0491 S13: -0.2169
REMARK 3 S21: 0.0775 S22: 0.5678 S23: -0.7935
REMARK 3 S31: 0.2315 S32: 0.4300 S33: -0.1705
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 145 )
REMARK 3 ORIGIN FOR THE GROUP (A): 37.6726 -1.1862 16.9578
REMARK 3 T TENSOR
REMARK 3 T11: 0.1604 T22: 0.1733
REMARK 3 T33: 0.1393 T12: -0.0216
REMARK 3 T13: -0.0375 T23: 0.0116
REMARK 3 L TENSOR
REMARK 3 L11: 1.7825 L22: 3.3675
REMARK 3 L33: 2.5302 L12: 0.6665
REMARK 3 L13: -0.3669 L23: 0.0828
REMARK 3 S TENSOR
REMARK 3 S11: -0.0000 S12: -0.0996 S13: 0.0480
REMARK 3 S21: 0.0861 S22: -0.0609 S23: -0.2460
REMARK 3 S31: -0.0262 S32: 0.1801 S33: 0.0456
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 188 )
REMARK 3 ORIGIN FOR THE GROUP (A): 27.6848 -13.2718 -3.8781
REMARK 3 T TENSOR
REMARK 3 T11: 0.2786 T22: 0.2097
REMARK 3 T33: 0.1713 T12: -0.0331
REMARK 3 T13: -0.0378 T23: 0.0121
REMARK 3 L TENSOR
REMARK 3 L11: 1.5451 L22: 3.6303
REMARK 3 L33: 2.3293 L12: 0.7800
REMARK 3 L13: 1.1723 L23: 2.5621
REMARK 3 S TENSOR
REMARK 3 S11: -0.1911 S12: 0.2338 S13: 0.0576
REMARK 3 S21: -0.5819 S22: 0.1814 S23: 0.0193
REMARK 3 S31: -0.3727 S32: 0.1786 S33: -0.0688
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 65 )
REMARK 3 ORIGIN FOR THE GROUP (A): 6.0059 -1.9844 21.8103
REMARK 3 T TENSOR
REMARK 3 T11: 0.2779 T22: 0.2530
REMARK 3 T33: 0.3607 T12: 0.0394
REMARK 3 T13: 0.1147 T23: 0.0071
REMARK 3 L TENSOR
REMARK 3 L11: 1.2457 L22: 2.6713
REMARK 3 L33: 3.3531 L12: -0.0471
REMARK 3 L13: -0.1331 L23: 1.8557
REMARK 3 S TENSOR
REMARK 3 S11: 0.2219 S12: 0.1136 S13: 0.0643
REMARK 3 S21: 0.0088 S22: -0.1514 S23: 0.4826
REMARK 3 S31: -0.4591 S32: -0.4809 S33: -0.0287
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 114 )
REMARK 3 ORIGIN FOR THE GROUP (A): 8.9663 -20.5314 14.8949
REMARK 3 T TENSOR
REMARK 3 T11: 0.2203 T22: 0.2223
REMARK 3 T33: 0.2391 T12: -0.0350
REMARK 3 T13: -0.0061 T23: -0.0100
REMARK 3 L TENSOR
REMARK 3 L11: 3.5826 L22: 2.9116
REMARK 3 L33: 2.4629 L12: 0.7492
REMARK 3 L13: -1.6950 L23: 0.1926
REMARK 3 S TENSOR
REMARK 3 S11: -0.1077 S12: -0.0467 S13: -0.1371
REMARK 3 S21: 0.0272 S22: 0.0013 S23: 0.2633
REMARK 3 S31: 0.1080 S32: -0.0431 S33: 0.0806
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 188 )
REMARK 3 ORIGIN FOR THE GROUP (A): 3.8818 -4.6223 18.9787
REMARK 3 T TENSOR
REMARK 3 T11: 0.2110 T22: 0.2610
REMARK 3 T33: 0.3920 T12: 0.0690
REMARK 3 T13: 0.0779 T23: 0.0442
REMARK 3 L TENSOR
REMARK 3 L11: 0.9551 L22: 3.0472
REMARK 3 L33: 2.8338 L12: 0.5686
REMARK 3 L13: -0.0332 L23: 0.8487
REMARK 3 S TENSOR
REMARK 3 S11: 0.0396 S12: 0.0504 S13: 0.2739
REMARK 3 S21: -0.2159 S22: 0.0188 S23: 0.4511
REMARK 3 S31: -0.5247 S32: -0.3286 S33: 0.0044
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 8U1Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-23.
REMARK 100 THE DEPOSITION ID IS D_1000277165.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 16-SEP-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON
REMARK 200 BEAMLINE : MX1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46256
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740
REMARK 200 RESOLUTION RANGE LOW (A) : 48.450
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2
REMARK 200 DATA REDUNDANCY : 3.800
REMARK 200 R MERGE (I) : 0.04200
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : 3.80
REMARK 200 R MERGE FOR SHELL (I) : 0.39000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.56
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 11-13% PEG 8000, 5-7.5% GLYCEROL, 1 MM
REMARK 280 COPPER(II) CHLORIDE, 100 MM SODIUM CACODYLATE, VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.86200
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.00150
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.86200
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.00150
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 464 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 LYS A 189
REMARK 465 LYS B 189
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LYS A 7 -78.80 -107.69
REMARK 500 LYS A 158 -35.86 -130.07
REMARK 500 LYS B 7 -83.29 -96.27
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH B 475 DISTANCE = 7.68 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CU B 201 CU
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ALA B 1 N
REMARK 620 2 ALA B 1 O 82.0
REMARK 620 3 GLU B 4 OE1 163.6 96.6
REMARK 620 4 ASP B 44 OD1 103.0 21.6 75.0
REMARK 620 5 ASP B 44 OD2 105.0 23.0 74.1 4.1
REMARK 620 N 1 2 3 4
DBREF 8U1Y A 1 189 UNP P0AEG4 DSBA_ECOLI 20 208
DBREF 8U1Y B 1 189 UNP P0AEG4 DSBA_ECOLI 20 208
SEQRES 1 A 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU
SEQRES 2 A 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE
SEQRES 3 A 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL
SEQRES 4 A 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU
SEQRES 5 A 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY
SEQRES 6 A 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL
SEQRES 7 A 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO
SEQRES 8 A 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER
SEQRES 9 A 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE
SEQRES 10 A 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL
SEQRES 11 A 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA
SEQRES 12 A 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN
SEQRES 13 A 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER
SEQRES 14 A 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL
SEQRES 15 A 189 LYS TYR LEU SER GLU LYS LYS
SEQRES 1 B 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU
SEQRES 2 B 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE
SEQRES 3 B 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL
SEQRES 4 B 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU
SEQRES 5 B 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY
SEQRES 6 B 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL
SEQRES 7 B 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO
SEQRES 8 B 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER
SEQRES 9 B 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE
SEQRES 10 B 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL
SEQRES 11 B 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA
SEQRES 12 B 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN
SEQRES 13 B 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER
SEQRES 14 B 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL
SEQRES 15 B 189 LYS TYR LEU SER GLU LYS LYS
HET 5V9 A 201 40
HET CU B 201 1
HETNAM 5V9 ~{N}-[(4-THIOPHEN-3-YLPHENYL)METHYL]CYCLOHEXANAMINE
HETNAM CU COPPER (II) ION
FORMUL 3 5V9 C17 H21 N S
FORMUL 4 CU CU 2+
FORMUL 5 HOH *402(H2 O)
HELIX 1 AA1 CYS A 30 VAL A 39 1 10
HELIX 2 AA2 HIS A 41 LEU A 50 1 10
HELIX 3 AA3 GLY A 65 GLY A 83 1 19
HELIX 4 AA4 VAL A 84 LYS A 98 1 15
HELIX 5 AA5 SER A 104 ALA A 115 1 12
HELIX 6 AA6 LYS A 118 ASN A 127 1 10
HELIX 7 AA7 SER A 128 VAL A 145 1 18
HELIX 8 AA8 PRO A 163 MET A 166 5 4
HELIX 9 AA9 ASN A 170 GLU A 187 1 18
HELIX 10 AB1 CYS B 30 VAL B 39 1 10
HELIX 11 AB2 HIS B 41 LEU B 50 1 10
HELIX 12 AB3 GLY B 65 GLY B 83 1 19
HELIX 13 AB4 VAL B 84 LYS B 98 1 15
HELIX 14 AB5 SER B 104 ALA B 115 1 12
HELIX 15 AB6 LYS B 118 ASN B 127 1 10
HELIX 16 AB7 SER B 128 VAL B 145 1 18
HELIX 17 AB8 PRO B 163 MET B 166 5 4
HELIX 18 AB9 ASN B 170 GLU B 187 1 18
SHEET 1 AA1 5 TYR A 9 THR A 11 0
SHEET 2 AA1 5 TYR A 159 LEU A 161 -1 O GLN A 160 N THR A 10
SHEET 3 AA1 5 ALA A 152 VAL A 155 -1 N VAL A 155 O TYR A 159
SHEET 4 AA1 5 VAL A 22 PHE A 26 -1 N LEU A 23 O PHE A 154
SHEET 5 AA1 5 MET A 56 HIS A 60 1 O THR A 57 N GLU A 24
SHEET 1 AA2 5 TYR B 9 THR B 11 0
SHEET 2 AA2 5 TYR B 159 LEU B 161 -1 O GLN B 160 N THR B 10
SHEET 3 AA2 5 ALA B 152 VAL B 155 -1 N MET B 153 O LEU B 161
SHEET 4 AA2 5 VAL B 22 PHE B 26 -1 N LEU B 23 O PHE B 154
SHEET 5 AA2 5 MET B 56 HIS B 60 1 O TYR B 59 N GLU B 24
SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.08
SSBOND 2 CYS B 30 CYS B 33 1555 1555 2.06
LINK N ALA B 1 CU CU B 201 1555 1555 2.27
LINK O ALA B 1 CU CU B 201 1555 1555 2.15
LINK OE1 GLU B 4 CU CU B 201 1555 1555 2.14
LINK OD1 ASP B 44 CU CU B 201 1555 4546 2.39
LINK OD2 ASP B 44 CU CU B 201 1555 4546 2.33
CISPEP 1 VAL A 150 PRO A 151 0 -2.43
CISPEP 2 VAL B 150 PRO B 151 0 -4.54
CRYST1 117.724 64.003 74.333 90.00 125.12 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008494 0.000000 0.005975 0.00000
SCALE2 0.000000 0.015624 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016448 0.00000