data_8UFF # _entry.id 8UFF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8UFF pdb_00008uff 10.2210/pdb8uff/pdb WWPDB D_1000278001 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8UFF _pdbx_database_status.recvd_initial_deposition_date 2023-10-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 8T4N _pdbx_database_related.content_type unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 wdw@gsu.edu W Wilson David 'principal investigator/group leader' 0000-0001-5225-5089 5 gpoon@gsu.edu Gregory Poon MK 'principal investigator/group leader' 0000-0001-5107-9458 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Terrell, J.R.' 1 0000-0001-5394-5663 'Poon, G.M.K.' 2 0000-0001-5107-9458 'Wilson, W.D.' 3 0000-0001-5225-5089 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural studies on the PU.1 inhibitory mechanism by diamidine minor groove binders' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terrell, J.R.' 1 0000-0001-5394-5663 primary 'Paul, A.' 2 ? primary 'Ogbonna, E.N.' 3 ? primary 'Farahat, A.A.' 4 ? primary 'Poon, G.M.K.' 5 0000-0001-5107-9458 primary 'Wilson, W.D.' 6 0000-0001-5225-5089 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3') ; 5044.317 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*TP*TP*TP*TP*AP*T)-3') ; 4750.089 1 ? ? ? ? 3 polymer man 'Transcription factor PU.1' 12436.583 1 ? ? 'ETS-Domain UNP residues 165-270' ? 4 non-polymer syn "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" 447.355 1 ? ? ? ? 5 water nat water 18.015 230 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '31 kDa-transforming protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DA)(DA)(DA)(DA)(DG)(DG)(DA)(DA)(DG)(DT)(DG)(DG)(DG)' AATAAAAGGAAGTGGG C ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DC)(DA)(DC)(DT)(DT)(DC)(DC)(DT)(DT)(DT)(DT)(DA)(DT)' TCCCACTTCCTTTTAT D ? 3 'polypeptide(L)' no no ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" Y5U 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DT n 1 4 DA n 1 5 DA n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DA n 1 12 DG n 1 13 DT n 1 14 DG n 1 15 DG n 1 16 DG n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 DC n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DA n 2 16 DT n 3 1 GLY n 3 2 SER n 3 3 LYS n 3 4 LYS n 3 5 LYS n 3 6 ILE n 3 7 ARG n 3 8 LEU n 3 9 TYR n 3 10 GLN n 3 11 PHE n 3 12 LEU n 3 13 LEU n 3 14 ASP n 3 15 LEU n 3 16 LEU n 3 17 ARG n 3 18 SER n 3 19 GLY n 3 20 ASP n 3 21 MET n 3 22 LYS n 3 23 ASP n 3 24 SER n 3 25 ILE n 3 26 TRP n 3 27 TRP n 3 28 VAL n 3 29 ASP n 3 30 LYS n 3 31 ASP n 3 32 LYS n 3 33 GLY n 3 34 THR n 3 35 PHE n 3 36 GLN n 3 37 PHE n 3 38 SER n 3 39 SER n 3 40 LYS n 3 41 HIS n 3 42 LYS n 3 43 GLU n 3 44 ALA n 3 45 LEU n 3 46 ALA n 3 47 HIS n 3 48 ARG n 3 49 TRP n 3 50 GLY n 3 51 ILE n 3 52 GLN n 3 53 LYS n 3 54 GLY n 3 55 ASN n 3 56 ARG n 3 57 LYS n 3 58 LYS n 3 59 MET n 3 60 THR n 3 61 TYR n 3 62 GLN n 3 63 LYS n 3 64 MET n 3 65 ALA n 3 66 ARG n 3 67 ALA n 3 68 LEU n 3 69 ARG n 3 70 ASN n 3 71 TYR n 3 72 GLY n 3 73 LYS n 3 74 THR n 3 75 GLY n 3 76 GLU n 3 77 VAL n 3 78 LYS n 3 79 LYS n 3 80 VAL n 3 81 LYS n 3 82 LYS n 3 83 LYS n 3 84 LEU n 3 85 THR n 3 86 TYR n 3 87 GLN n 3 88 PHE n 3 89 SER n 3 90 GLY n 3 91 GLU n 3 92 VAL n 3 93 LEU n 3 94 GLY n 3 95 ARG n 3 96 GLY n 3 97 GLY n 3 98 LEU n 3 99 ALA n 3 100 GLU n 3 101 ARG n 3 102 ARG n 3 103 HIS n 3 104 PRO n 3 105 PRO n 3 106 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 106 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPI1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Y5U non-polymer . "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" ? 'C20 H16 N8 Se' 447.355 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA C . n A 1 2 DA 2 2 2 DA DA C . n A 1 3 DT 3 3 3 DT DT C . n A 1 4 DA 4 4 4 DA DA C . n A 1 5 DA 5 5 5 DA DA C . n A 1 6 DA 6 6 6 DA DA C . n A 1 7 DA 7 7 7 DA DA C . n A 1 8 DG 8 8 8 DG DG C . n A 1 9 DG 9 9 9 DG DG C . n A 1 10 DA 10 10 10 DA DA C . n A 1 11 DA 11 11 11 DA DA C . n A 1 12 DG 12 12 12 DG DG C . n A 1 13 DT 13 13 13 DT DT C . n A 1 14 DG 14 14 14 DG DG C . n A 1 15 DG 15 15 15 DG DG C . n A 1 16 DG 16 16 16 DG DG C . n B 2 1 DT 1 17 17 DT DT D . n B 2 2 DC 2 18 18 DC DC D . n B 2 3 DC 3 19 19 DC DC D . n B 2 4 DC 4 20 20 DC DC D . n B 2 5 DA 5 21 21 DA DA D . n B 2 6 DC 6 22 22 DC DC D . n B 2 7 DT 7 23 23 DT DT D . n B 2 8 DT 8 24 24 DT DT D . n B 2 9 DC 9 25 25 DC DC D . n B 2 10 DC 10 26 26 DC DC D . n B 2 11 DT 11 27 27 DT DT D . n B 2 12 DT 12 28 28 DT DT D . n B 2 13 DT 13 29 29 DT DT D . n B 2 14 DT 14 30 30 DT DT D . n B 2 15 DA 15 31 31 DA DA D . n B 2 16 DT 16 32 32 DT DT D . n C 3 1 GLY 1 165 ? ? ? F . n C 3 2 SER 2 166 ? ? ? F . n C 3 3 LYS 3 167 ? ? ? F . n C 3 4 LYS 4 168 ? ? ? F . n C 3 5 LYS 5 169 169 LYS LYS F . n C 3 6 ILE 6 170 170 ILE ILE F . n C 3 7 ARG 7 171 171 ARG ARG F . n C 3 8 LEU 8 172 172 LEU LEU F . n C 3 9 TYR 9 173 173 TYR TYR F . n C 3 10 GLN 10 174 174 GLN GLN F . n C 3 11 PHE 11 175 175 PHE PHE F . n C 3 12 LEU 12 176 176 LEU LEU F . n C 3 13 LEU 13 177 177 LEU LEU F . n C 3 14 ASP 14 178 178 ASP ASP F . n C 3 15 LEU 15 179 179 LEU LEU F . n C 3 16 LEU 16 180 180 LEU LEU F . n C 3 17 ARG 17 181 181 ARG ARG F . n C 3 18 SER 18 182 182 SER SER F . n C 3 19 GLY 19 183 183 GLY GLY F . n C 3 20 ASP 20 184 184 ASP ASP F . n C 3 21 MET 21 185 185 MET MET F . n C 3 22 LYS 22 186 186 LYS LYS F . n C 3 23 ASP 23 187 187 ASP ASP F . n C 3 24 SER 24 188 188 SER SER F . n C 3 25 ILE 25 189 189 ILE ILE F . n C 3 26 TRP 26 190 190 TRP TRP F . n C 3 27 TRP 27 191 191 TRP TRP F . n C 3 28 VAL 28 192 192 VAL VAL F . n C 3 29 ASP 29 193 193 ASP ASP F . n C 3 30 LYS 30 194 194 LYS LYS F . n C 3 31 ASP 31 195 195 ASP ASP F . n C 3 32 LYS 32 196 196 LYS LYS F . n C 3 33 GLY 33 197 197 GLY GLY F . n C 3 34 THR 34 198 198 THR THR F . n C 3 35 PHE 35 199 199 PHE PHE F . n C 3 36 GLN 36 200 200 GLN GLN F . n C 3 37 PHE 37 201 201 PHE PHE F . n C 3 38 SER 38 202 202 SER SER F . n C 3 39 SER 39 203 203 SER SER F . n C 3 40 LYS 40 204 204 LYS LYS F . n C 3 41 HIS 41 205 205 HIS HIS F . n C 3 42 LYS 42 206 206 LYS LYS F . n C 3 43 GLU 43 207 207 GLU GLU F . n C 3 44 ALA 44 208 208 ALA ALA F . n C 3 45 LEU 45 209 209 LEU LEU F . n C 3 46 ALA 46 210 210 ALA ALA F . n C 3 47 HIS 47 211 211 HIS HIS F . n C 3 48 ARG 48 212 212 ARG ARG F . n C 3 49 TRP 49 213 213 TRP TRP F . n C 3 50 GLY 50 214 214 GLY GLY F . n C 3 51 ILE 51 215 215 ILE ILE F . n C 3 52 GLN 52 216 216 GLN GLN F . n C 3 53 LYS 53 217 217 LYS LYS F . n C 3 54 GLY 54 218 218 GLY GLY F . n C 3 55 ASN 55 219 219 ASN ASN F . n C 3 56 ARG 56 220 220 ARG ARG F . n C 3 57 LYS 57 221 221 LYS LYS F . n C 3 58 LYS 58 222 222 LYS LYS F . n C 3 59 MET 59 223 223 MET MET F . n C 3 60 THR 60 224 224 THR THR F . n C 3 61 TYR 61 225 225 TYR TYR F . n C 3 62 GLN 62 226 226 GLN GLN F . n C 3 63 LYS 63 227 227 LYS LYS F . n C 3 64 MET 64 228 228 MET MET F . n C 3 65 ALA 65 229 229 ALA ALA F . n C 3 66 ARG 66 230 230 ARG ARG F . n C 3 67 ALA 67 231 231 ALA ALA F . n C 3 68 LEU 68 232 232 LEU LEU F . n C 3 69 ARG 69 233 233 ARG ARG F . n C 3 70 ASN 70 234 234 ASN ASN F . n C 3 71 TYR 71 235 235 TYR TYR F . n C 3 72 GLY 72 236 236 GLY GLY F . n C 3 73 LYS 73 237 237 LYS LYS F . n C 3 74 THR 74 238 238 THR THR F . n C 3 75 GLY 75 239 239 GLY GLY F . n C 3 76 GLU 76 240 240 GLU GLU F . n C 3 77 VAL 77 241 241 VAL VAL F . n C 3 78 LYS 78 242 242 LYS LYS F . n C 3 79 LYS 79 243 243 LYS LYS F . n C 3 80 VAL 80 244 244 VAL VAL F . n C 3 81 LYS 81 245 245 LYS LYS F . n C 3 82 LYS 82 246 246 LYS LYS F . n C 3 83 LYS 83 247 247 LYS LYS F . n C 3 84 LEU 84 248 248 LEU LEU F . n C 3 85 THR 85 249 249 THR THR F . n C 3 86 TYR 86 250 250 TYR TYR F . n C 3 87 GLN 87 251 251 GLN GLN F . n C 3 88 PHE 88 252 252 PHE PHE F . n C 3 89 SER 89 253 253 SER SER F . n C 3 90 GLY 90 254 254 GLY GLY F . n C 3 91 GLU 91 255 255 GLU GLU F . n C 3 92 VAL 92 256 256 VAL VAL F . n C 3 93 LEU 93 257 257 LEU LEU F . n C 3 94 GLY 94 258 258 GLY GLY F . n C 3 95 ARG 95 259 259 ARG ARG F . n C 3 96 GLY 96 260 ? ? ? F . n C 3 97 GLY 97 261 ? ? ? F . n C 3 98 LEU 98 262 ? ? ? F . n C 3 99 ALA 99 263 ? ? ? F . n C 3 100 GLU 100 264 ? ? ? F . n C 3 101 ARG 101 265 ? ? ? F . n C 3 102 ARG 102 266 ? ? ? F . n C 3 103 HIS 103 267 ? ? ? F . n C 3 104 PRO 104 268 ? ? ? F . n C 3 105 PRO 105 269 ? ? ? F . n C 3 106 HIS 106 270 ? ? ? F . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id Y5U _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id Y5U _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 Y5U 1 301 301 Y5U 976 D . E 5 HOH 1 101 234 HOH HOH C . E 5 HOH 2 102 121 HOH HOH C . E 5 HOH 3 103 218 HOH HOH C . E 5 HOH 4 104 68 HOH HOH C . E 5 HOH 5 105 107 HOH HOH C . E 5 HOH 6 106 82 HOH HOH C . E 5 HOH 7 107 5 HOH HOH C . E 5 HOH 8 108 8 HOH HOH C . E 5 HOH 9 109 23 HOH HOH C . E 5 HOH 10 110 143 HOH HOH C . E 5 HOH 11 111 48 HOH HOH C . E 5 HOH 12 112 22 HOH HOH C . E 5 HOH 13 113 32 HOH HOH C . E 5 HOH 14 114 230 HOH HOH C . E 5 HOH 15 115 170 HOH HOH C . E 5 HOH 16 116 135 HOH HOH C . E 5 HOH 17 117 76 HOH HOH C . E 5 HOH 18 118 27 HOH HOH C . E 5 HOH 19 119 119 HOH HOH C . E 5 HOH 20 120 75 HOH HOH C . E 5 HOH 21 121 173 HOH HOH C . E 5 HOH 22 122 49 HOH HOH C . E 5 HOH 23 123 100 HOH HOH C . E 5 HOH 24 124 150 HOH HOH C . E 5 HOH 25 125 237 HOH HOH C . E 5 HOH 26 126 61 HOH HOH C . E 5 HOH 27 127 67 HOH HOH C . E 5 HOH 28 128 72 HOH HOH C . E 5 HOH 29 129 80 HOH HOH C . E 5 HOH 30 130 43 HOH HOH C . E 5 HOH 31 131 116 HOH HOH C . E 5 HOH 32 132 238 HOH HOH C . E 5 HOH 33 133 209 HOH HOH C . E 5 HOH 34 134 128 HOH HOH C . E 5 HOH 35 135 197 HOH HOH C . E 5 HOH 36 136 193 HOH HOH C . E 5 HOH 37 137 101 HOH HOH C . E 5 HOH 38 138 145 HOH HOH C . E 5 HOH 39 139 123 HOH HOH C . E 5 HOH 40 140 235 HOH HOH C . E 5 HOH 41 141 131 HOH HOH C . E 5 HOH 42 142 162 HOH HOH C . E 5 HOH 43 143 180 HOH HOH C . E 5 HOH 44 144 152 HOH HOH C . E 5 HOH 45 145 165 HOH HOH C . E 5 HOH 46 146 115 HOH HOH C . E 5 HOH 47 147 228 HOH HOH C . E 5 HOH 48 148 195 HOH HOH C . E 5 HOH 49 149 136 HOH HOH C . E 5 HOH 50 150 93 HOH HOH C . E 5 HOH 51 151 126 HOH HOH C . E 5 HOH 52 152 190 HOH HOH C . E 5 HOH 53 153 86 HOH HOH C . E 5 HOH 54 154 194 HOH HOH C . E 5 HOH 55 155 172 HOH HOH C . E 5 HOH 56 156 159 HOH HOH C . E 5 HOH 57 157 167 HOH HOH C . F 5 HOH 1 401 97 HOH HOH D . F 5 HOH 2 402 213 HOH HOH D . F 5 HOH 3 403 25 HOH HOH D . F 5 HOH 4 404 57 HOH HOH D . F 5 HOH 5 405 2 HOH HOH D . F 5 HOH 6 406 20 HOH HOH D . F 5 HOH 7 407 60 HOH HOH D . F 5 HOH 8 408 54 HOH HOH D . F 5 HOH 9 409 65 HOH HOH D . F 5 HOH 10 410 45 HOH HOH D . F 5 HOH 11 411 18 HOH HOH D . F 5 HOH 12 412 11 HOH HOH D . F 5 HOH 13 413 153 HOH HOH D . F 5 HOH 14 414 9 HOH HOH D . F 5 HOH 15 415 175 HOH HOH D . F 5 HOH 16 416 71 HOH HOH D . F 5 HOH 17 417 12 HOH HOH D . F 5 HOH 18 418 79 HOH HOH D . F 5 HOH 19 419 109 HOH HOH D . F 5 HOH 20 420 1 HOH HOH D . F 5 HOH 21 421 13 HOH HOH D . F 5 HOH 22 422 73 HOH HOH D . F 5 HOH 23 423 34 HOH HOH D . F 5 HOH 24 424 59 HOH HOH D . F 5 HOH 25 425 146 HOH HOH D . F 5 HOH 26 426 141 HOH HOH D . F 5 HOH 27 427 3 HOH HOH D . F 5 HOH 28 428 142 HOH HOH D . F 5 HOH 29 429 103 HOH HOH D . F 5 HOH 30 430 36 HOH HOH D . F 5 HOH 31 431 108 HOH HOH D . F 5 HOH 32 432 30 HOH HOH D . F 5 HOH 33 433 41 HOH HOH D . F 5 HOH 34 434 236 HOH HOH D . F 5 HOH 35 435 200 HOH HOH D . F 5 HOH 36 436 51 HOH HOH D . F 5 HOH 37 437 70 HOH HOH D . F 5 HOH 38 438 89 HOH HOH D . F 5 HOH 39 439 66 HOH HOH D . F 5 HOH 40 440 46 HOH HOH D . F 5 HOH 41 441 158 HOH HOH D . F 5 HOH 42 442 112 HOH HOH D . F 5 HOH 43 443 4 HOH HOH D . F 5 HOH 44 444 139 HOH HOH D . F 5 HOH 45 445 53 HOH HOH D . F 5 HOH 46 446 207 HOH HOH D . F 5 HOH 47 447 114 HOH HOH D . F 5 HOH 48 448 204 HOH HOH D . F 5 HOH 49 449 211 HOH HOH D . F 5 HOH 50 450 147 HOH HOH D . F 5 HOH 51 451 69 HOH HOH D . F 5 HOH 52 452 125 HOH HOH D . F 5 HOH 53 453 55 HOH HOH D . F 5 HOH 54 454 156 HOH HOH D . F 5 HOH 55 455 221 HOH HOH D . F 5 HOH 56 456 179 HOH HOH D . F 5 HOH 57 457 138 HOH HOH D . F 5 HOH 58 458 215 HOH HOH D . F 5 HOH 59 459 192 HOH HOH D . G 5 HOH 1 301 184 HOH HOH F . G 5 HOH 2 302 210 HOH HOH F . G 5 HOH 3 303 24 HOH HOH F . G 5 HOH 4 304 124 HOH HOH F . G 5 HOH 5 305 98 HOH HOH F . G 5 HOH 6 306 26 HOH HOH F . G 5 HOH 7 307 64 HOH HOH F . G 5 HOH 8 308 96 HOH HOH F . G 5 HOH 9 309 78 HOH HOH F . G 5 HOH 10 310 90 HOH HOH F . G 5 HOH 11 311 6 HOH HOH F . G 5 HOH 12 312 21 HOH HOH F . G 5 HOH 13 313 171 HOH HOH F . G 5 HOH 14 314 40 HOH HOH F . G 5 HOH 15 315 214 HOH HOH F . G 5 HOH 16 316 133 HOH HOH F . G 5 HOH 17 317 35 HOH HOH F . G 5 HOH 18 318 149 HOH HOH F . G 5 HOH 19 319 198 HOH HOH F . G 5 HOH 20 320 62 HOH HOH F . G 5 HOH 21 321 122 HOH HOH F . G 5 HOH 22 322 33 HOH HOH F . G 5 HOH 23 323 56 HOH HOH F . G 5 HOH 24 324 186 HOH HOH F . G 5 HOH 25 325 74 HOH HOH F . G 5 HOH 26 326 29 HOH HOH F . G 5 HOH 27 327 63 HOH HOH F . G 5 HOH 28 328 17 HOH HOH F . G 5 HOH 29 329 105 HOH HOH F . G 5 HOH 30 330 47 HOH HOH F . G 5 HOH 31 331 91 HOH HOH F . G 5 HOH 32 332 191 HOH HOH F . G 5 HOH 33 333 129 HOH HOH F . G 5 HOH 34 334 39 HOH HOH F . G 5 HOH 35 335 50 HOH HOH F . G 5 HOH 36 336 87 HOH HOH F . G 5 HOH 37 337 232 HOH HOH F . G 5 HOH 38 338 187 HOH HOH F . G 5 HOH 39 339 134 HOH HOH F . G 5 HOH 40 340 169 HOH HOH F . G 5 HOH 41 341 77 HOH HOH F . G 5 HOH 42 342 102 HOH HOH F . G 5 HOH 43 343 88 HOH HOH F . G 5 HOH 44 344 99 HOH HOH F . G 5 HOH 45 345 19 HOH HOH F . G 5 HOH 46 346 15 HOH HOH F . G 5 HOH 47 347 111 HOH HOH F . G 5 HOH 48 348 144 HOH HOH F . G 5 HOH 49 349 42 HOH HOH F . G 5 HOH 50 350 37 HOH HOH F . G 5 HOH 51 351 185 HOH HOH F . G 5 HOH 52 352 10 HOH HOH F . G 5 HOH 53 353 7 HOH HOH F . G 5 HOH 54 354 178 HOH HOH F . G 5 HOH 55 355 31 HOH HOH F . G 5 HOH 56 356 92 HOH HOH F . G 5 HOH 57 357 84 HOH HOH F . G 5 HOH 58 358 217 HOH HOH F . G 5 HOH 59 359 85 HOH HOH F . G 5 HOH 60 360 212 HOH HOH F . G 5 HOH 61 361 206 HOH HOH F . G 5 HOH 62 362 155 HOH HOH F . G 5 HOH 63 363 94 HOH HOH F . G 5 HOH 64 364 38 HOH HOH F . G 5 HOH 65 365 110 HOH HOH F . G 5 HOH 66 366 104 HOH HOH F . G 5 HOH 67 367 151 HOH HOH F . G 5 HOH 68 368 196 HOH HOH F . G 5 HOH 69 369 239 HOH HOH F . G 5 HOH 70 370 28 HOH HOH F . G 5 HOH 71 371 233 HOH HOH F . G 5 HOH 72 372 148 HOH HOH F . G 5 HOH 73 373 14 HOH HOH F . G 5 HOH 74 374 95 HOH HOH F . G 5 HOH 75 375 201 HOH HOH F . G 5 HOH 76 376 127 HOH HOH F . G 5 HOH 77 377 130 HOH HOH F . G 5 HOH 78 378 231 HOH HOH F . G 5 HOH 79 379 177 HOH HOH F . G 5 HOH 80 380 81 HOH HOH F . G 5 HOH 81 381 166 HOH HOH F . G 5 HOH 82 382 16 HOH HOH F . G 5 HOH 83 383 160 HOH HOH F . G 5 HOH 84 384 224 HOH HOH F . G 5 HOH 85 385 157 HOH HOH F . G 5 HOH 86 386 174 HOH HOH F . G 5 HOH 87 387 118 HOH HOH F . G 5 HOH 88 388 203 HOH HOH F . G 5 HOH 89 389 132 HOH HOH F . G 5 HOH 90 390 181 HOH HOH F . G 5 HOH 91 391 220 HOH HOH F . G 5 HOH 92 392 83 HOH HOH F . G 5 HOH 93 393 222 HOH HOH F . G 5 HOH 94 394 219 HOH HOH F . G 5 HOH 95 395 182 HOH HOH F . G 5 HOH 96 396 58 HOH HOH F . G 5 HOH 97 397 227 HOH HOH F . G 5 HOH 98 398 223 HOH HOH F . G 5 HOH 99 399 137 HOH HOH F . G 5 HOH 100 400 205 HOH HOH F . G 5 HOH 101 401 226 HOH HOH F . G 5 HOH 102 402 202 HOH HOH F . G 5 HOH 103 403 113 HOH HOH F . G 5 HOH 104 404 52 HOH HOH F . G 5 HOH 105 405 120 HOH HOH F . G 5 HOH 106 406 183 HOH HOH F . G 5 HOH 107 407 176 HOH HOH F . G 5 HOH 108 408 189 HOH HOH F . G 5 HOH 109 409 229 HOH HOH F . G 5 HOH 110 410 154 HOH HOH F . G 5 HOH 111 411 106 HOH HOH F . G 5 HOH 112 412 163 HOH HOH F . G 5 HOH 113 413 140 HOH HOH F . G 5 HOH 114 414 225 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D DT 32 ? "C5'" ? B DT 16 "C5'" 2 1 Y 1 D DT 32 ? "C4'" ? B DT 16 "C4'" 3 1 Y 1 D DT 32 ? "O4'" ? B DT 16 "O4'" 4 1 Y 1 D DT 32 ? "C3'" ? B DT 16 "C3'" 5 1 Y 1 D DT 32 ? "O3'" ? B DT 16 "O3'" 6 1 Y 1 D DT 32 ? "C2'" ? B DT 16 "C2'" 7 1 Y 1 D DT 32 ? "C1'" ? B DT 16 "C1'" 8 1 Y 1 D DT 32 ? N1 ? B DT 16 N1 9 1 Y 1 D DT 32 ? C2 ? B DT 16 C2 10 1 Y 1 D DT 32 ? O2 ? B DT 16 O2 11 1 Y 1 D DT 32 ? N3 ? B DT 16 N3 12 1 Y 1 D DT 32 ? C4 ? B DT 16 C4 13 1 Y 1 D DT 32 ? O4 ? B DT 16 O4 14 1 Y 1 D DT 32 ? C5 ? B DT 16 C5 15 1 Y 1 D DT 32 ? C7 ? B DT 16 C7 16 1 Y 1 D DT 32 ? C6 ? B DT 16 C6 17 1 Y 1 F LYS 169 ? CG ? C LYS 5 CG 18 1 Y 1 F LYS 169 ? CD ? C LYS 5 CD 19 1 Y 1 F LYS 169 ? CE ? C LYS 5 CE 20 1 Y 1 F LYS 169 ? NZ ? C LYS 5 NZ 21 1 Y 0 F ARG 220 ? CZ ? C ARG 56 CZ 22 1 Y 0 F LYS 237 ? CD ? C LYS 73 CD 23 1 Y 1 F ARG 259 ? CG ? C ARG 95 CG 24 1 Y 1 F ARG 259 ? CD ? C ARG 95 CD 25 1 Y 1 F ARG 259 ? NE ? C ARG 95 NE 26 1 Y 1 F ARG 259 ? CZ ? C ARG 95 CZ 27 1 Y 1 F ARG 259 ? NH1 ? C ARG 95 NH1 28 1 Y 1 F ARG 259 ? NH2 ? C ARG 95 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 116.358 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8UFF _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.913 _cell.length_a_esd ? _cell.length_b 60.292 _cell.length_b_esd ? _cell.length_c 44.393 _cell.length_c_esd ? _cell.volume 102917.499 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8UFF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8UFF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Sodium Acetate, pH=4.6, 2% PEG 3350 well solution mixed 1:1 with 250uM Protein/DNA Complex' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-10-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Asymmetric curved crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.977410 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.977410 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 19.47 _reflns.entry_id 8UFF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.66 _reflns.d_resolution_low 33.20 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23969 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.45 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.05122 _reflns.pdbx_Rpim_I_all 0.02639 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.04366 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.66 _reflns_shell.d_res_low 1.719 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.71 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2414 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.4013 _reflns_shell.pdbx_Rpim_I_all 0.1995 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.956 _reflns_shell.pdbx_CC_star 0.989 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.30 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.3469 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 25.41 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8UFF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.66 _refine.ls_d_res_low 33.20 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23932 _refine.ls_number_reflns_R_free 1978 _refine.ls_number_reflns_R_work 21954 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.52 _refine.ls_percent_reflns_R_free 8.27 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1658 _refine.ls_R_factor_R_free 0.2010 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1624 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.9586 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1859 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.66 _refine_hist.d_res_low 33.20 _refine_hist.number_atoms_solvent 230 _refine_hist.number_atoms_total 1644 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 751 _refine_hist.pdbx_number_atoms_nucleic_acid 634 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0101 ? 1509 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.3396 ? 2160 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0583 ? 226 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0124 ? 161 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 24.3418 ? 625 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.66 1.70 . . 136 1564 99.24 . . . . 0.2186 . . . . . . . . . . . 0.2823 'X-RAY DIFFRACTION' 1.70 1.75 . . 140 1554 99.65 . . . . 0.1989 . . . . . . . . . . . 0.2257 'X-RAY DIFFRACTION' 1.75 1.80 . . 141 1566 99.77 . . . . 0.1995 . . . . . . . . . . . 0.2490 'X-RAY DIFFRACTION' 1.80 1.86 . . 147 1559 99.71 . . . . 0.1848 . . . . . . . . . . . 0.2421 'X-RAY DIFFRACTION' 1.86 1.92 . . 142 1556 99.59 . . . . 0.1847 . . . . . . . . . . . 0.2381 'X-RAY DIFFRACTION' 1.92 2.00 . . 134 1591 100.00 . . . . 0.1812 . . . . . . . . . . . 0.2156 'X-RAY DIFFRACTION' 2.00 2.09 . . 133 1559 99.88 . . . . 0.1823 . . . . . . . . . . . 0.2245 'X-RAY DIFFRACTION' 2.09 2.20 . . 140 1566 99.88 . . . . 0.1677 . . . . . . . . . . . 0.2178 'X-RAY DIFFRACTION' 2.20 2.34 . . 150 1576 99.65 . . . . 0.1548 . . . . . . . . . . . 0.1949 'X-RAY DIFFRACTION' 2.34 2.52 . . 146 1553 99.77 . . . . 0.1613 . . . . . . . . . . . 0.1919 'X-RAY DIFFRACTION' 2.52 2.77 . . 143 1568 99.59 . . . . 0.1705 . . . . . . . . . . . 0.2208 'X-RAY DIFFRACTION' 2.77 3.17 . . 147 1573 99.54 . . . . 0.1723 . . . . . . . . . . . 0.2128 'X-RAY DIFFRACTION' 3.17 4.00 . . 137 1565 98.21 . . . . 0.1431 . . . . . . . . . . . 0.1780 'X-RAY DIFFRACTION' 4.00 33.20 . . 142 1604 98.98 . . . . 0.1422 . . . . . . . . . . . 0.1716 # _struct.entry_id 8UFF _struct.title 'Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAAGTGGG) in Ternary Complex with DB1976' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8UFF _struct_keywords.text ;transcription factor, protein-DNA complex, ETS family, ETS, PU.1, TRANSCRIPTION-DNA complex, diamidine, minor-groove binder, small-molecule, transcription inhibition, TRANSCRIPTION ; _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8UFF 8UFF ? 1 ? 1 2 PDB 8UFF 8UFF ? 2 ? 1 3 UNP SPI1_HUMAN P17947 ? 3 ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; 165 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8UFF C 1 ? 16 ? 8UFF 1 ? 16 ? 1 16 2 2 8UFF D 1 ? 16 ? 8UFF 17 ? 32 ? 17 32 3 3 8UFF F 1 ? 106 ? P17947 165 ? 270 ? 165 270 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3560 ? 1 MORE -18 ? 1 'SSA (A^2)' 9860 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG C 7 ? GLY C 19 ? ARG F 171 GLY F 183 1 ? 13 HELX_P HELX_P2 AA2 HIS C 41 ? GLY C 54 ? HIS F 205 GLY F 218 1 ? 14 HELX_P HELX_P3 AA3 THR C 60 ? ASN C 70 ? THR F 224 ASN F 234 1 ? 11 HELX_P HELX_P4 AA4 ASN C 70 ? GLY C 75 ? ASN F 234 GLY F 239 1 ? 6 HELX_P HELX_P5 AA5 SER C 89 ? ARG C 95 ? SER F 253 ARG F 259 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 15 N1 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 15 N6 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 5 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 5 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 6 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 6 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 11 N3 ? ? C DA 7 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 11 O4 ? ? C DA 7 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 8 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 8 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 8 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 10 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 10 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 7 N3 ? ? C DA 11 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 7 O4 ? ? C DA 11 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 13 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 13 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 14 D DC 20 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog27 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 3 N3 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 3 O2 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 3 N4 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE C 25 ? ASP C 29 ? ILE F 189 ASP F 193 AA1 2 THR C 34 ? PHE C 37 ? THR F 198 PHE F 201 AA1 3 THR C 85 ? PHE C 88 ? THR F 249 PHE F 252 AA1 4 VAL C 77 ? LYS C 79 ? VAL F 241 LYS F 243 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL C 28 ? N VAL F 192 O THR C 34 ? O THR F 198 AA1 2 3 N PHE C 35 ? N PHE F 199 O TYR C 86 ? O TYR F 250 AA1 3 4 O GLN C 87 ? O GLN F 251 N LYS C 78 ? N LYS F 242 # _pdbx_entry_details.entry_id 8UFF _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O D HOH 453 ? ? O F HOH 373 ? ? 2.07 2 1 O F HOH 301 ? ? O F HOH 361 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 C _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 120 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 F _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 379 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 8 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 8 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.372 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.047 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DG 8 ? ? "C1'" C DG 8 ? ? N9 C DG 8 ? ? 112.86 108.30 4.56 0.30 N 2 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 111.40 108.30 3.10 0.30 N 3 1 "O4'" D DA 21 ? ? "C1'" D DA 21 ? ? N9 D DA 21 ? ? 110.43 108.30 2.13 0.30 N 4 1 "O4'" D DC 22 ? ? "C1'" D DC 22 ? ? N1 D DC 22 ? ? 110.15 108.30 1.85 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 F GLY 165 ? C GLY 1 2 1 Y 1 F SER 166 ? C SER 2 3 1 Y 1 F LYS 167 ? C LYS 3 4 1 Y 1 F LYS 168 ? C LYS 4 5 1 Y 1 F GLY 260 ? C GLY 96 6 1 Y 1 F GLY 261 ? C GLY 97 7 1 Y 1 F LEU 262 ? C LEU 98 8 1 Y 1 F ALA 263 ? C ALA 99 9 1 Y 1 F GLU 264 ? C GLU 100 10 1 Y 1 F ARG 265 ? C ARG 101 11 1 Y 1 F ARG 266 ? C ARG 102 12 1 Y 1 F HIS 267 ? C HIS 103 13 1 Y 1 F PRO 268 ? C PRO 104 14 1 Y 1 F PRO 269 ? C PRO 105 15 1 Y 1 F HIS 270 ? C HIS 106 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 Y5U C1 C N N 520 Y5U C2 C Y N 521 Y5U C3 C Y N 522 Y5U C4 C Y N 523 Y5U C5 C Y N 524 Y5U C6 C Y N 525 Y5U C7 C Y N 526 Y5U C8 C Y N 527 Y5U C9 C Y N 528 Y5U C10 C Y N 529 Y5U C11 C Y N 530 Y5U C12 C Y N 531 Y5U C13 C Y N 532 Y5U C14 C Y N 533 Y5U C15 C Y N 534 Y5U C16 C N N 535 Y5U C17 C Y N 536 Y5U C18 C Y N 537 Y5U C19 C Y N 538 Y5U C20 C Y N 539 Y5U SE1 SE Y N 540 Y5U N1 N N N 541 Y5U N2 N N N 542 Y5U N3 N Y N 543 Y5U N4 N Y N 544 Y5U N5 N N N 545 Y5U N6 N N N 546 Y5U N7 N Y N 547 Y5U N8 N Y N 548 Y5U H4 H N N 549 Y5U H5 H N N 550 Y5U H6 H N N 551 Y5U H7 H N N 552 Y5U H8 H N N 553 Y5U H9 H N N 554 Y5U H13 H N N 555 Y5U H16 H N N 556 Y5U H1 H N N 557 Y5U H2 H N N 558 Y5U H3 H N N 559 Y5U H10 H N N 560 Y5U H12 H N N 561 Y5U H11 H N N 562 Y5U H14 H N N 563 Y5U H15 H N N 564 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 Y5U N2 C1 sing N N 512 Y5U N1 C1 doub N N 513 Y5U C1 C2 sing N N 514 Y5U C2 C3 doub Y N 515 Y5U C2 C20 sing Y N 516 Y5U C3 C4 sing Y N 517 Y5U C20 C19 doub Y N 518 Y5U C4 C5 doub Y N 519 Y5U C19 C5 sing Y N 520 Y5U C19 N8 sing Y N 521 Y5U C5 N3 sing Y N 522 Y5U N8 C6 sing Y N 523 Y5U N3 C6 doub Y N 524 Y5U C6 C7 sing N N 525 Y5U C7 C8 doub Y N 526 Y5U C7 SE1 sing Y N 527 Y5U C8 C9 sing Y N 528 Y5U SE1 C10 sing Y N 529 Y5U C9 C10 doub Y N 530 Y5U C10 C11 sing N N 531 Y5U C11 N4 doub Y N 532 Y5U C11 N7 sing Y N 533 Y5U N4 C12 sing Y N 534 Y5U N7 C18 sing Y N 535 Y5U C12 C18 doub Y N 536 Y5U C12 C13 sing Y N 537 Y5U C18 C17 sing Y N 538 Y5U C13 C14 doub Y N 539 Y5U C17 C15 doub Y N 540 Y5U C14 C15 sing Y N 541 Y5U C15 C16 sing N N 542 Y5U C16 N6 sing N N 543 Y5U C16 N5 doub N N 544 Y5U C3 H4 sing N N 545 Y5U C4 H5 sing N N 546 Y5U C8 H6 sing N N 547 Y5U C9 H7 sing N N 548 Y5U C13 H8 sing N N 549 Y5U C14 H9 sing N N 550 Y5U C17 H13 sing N N 551 Y5U C20 H16 sing N N 552 Y5U N1 H1 sing N N 553 Y5U N2 H2 sing N N 554 Y5U N2 H3 sing N N 555 Y5U N5 H10 sing N N 556 Y5U N6 H12 sing N N 557 Y5U N6 H11 sing N N 558 Y5U N7 H14 sing N N 559 Y5U N8 H15 sing N N 560 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8UFF 'double helix' 8UFF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 3 1_555 B DA 15 1_555 0.002 -0.160 -0.013 3.661 -11.201 2.624 1 C_DT3:DA31_D C 3 ? D 31 ? 20 1 1 A DA 4 1_555 B DT 14 1_555 -0.067 -0.133 0.070 1.949 -12.340 6.689 2 C_DA4:DT30_D C 4 ? D 30 ? 20 1 1 A DA 5 1_555 B DT 13 1_555 -0.013 -0.045 0.006 6.265 -12.460 8.260 3 C_DA5:DT29_D C 5 ? D 29 ? 20 1 1 A DA 6 1_555 B DT 12 1_555 0.043 -0.166 -0.197 0.936 -13.879 7.813 4 C_DA6:DT28_D C 6 ? D 28 ? 20 1 1 A DA 7 1_555 B DT 11 1_555 0.281 -0.114 -0.081 -6.654 -4.402 4.506 5 C_DA7:DT27_D C 7 ? D 27 ? 20 1 1 A DG 8 1_555 B DC 10 1_555 -0.251 -0.152 0.032 7.472 1.858 0.406 6 C_DG8:DC26_D C 8 ? D 26 ? 19 1 1 A DG 9 1_555 B DC 9 1_555 -0.237 -0.167 0.075 10.330 -10.982 0.944 7 C_DG9:DC25_D C 9 ? D 25 ? 19 1 1 A DA 10 1_555 B DT 8 1_555 0.157 -0.189 0.142 10.093 -17.852 4.956 8 C_DA10:DT24_D C 10 ? D 24 ? 20 1 1 A DA 11 1_555 B DT 7 1_555 0.130 -0.168 0.138 2.607 -18.010 4.737 9 C_DA11:DT23_D C 11 ? D 23 ? 20 1 1 A DG 12 1_555 B DC 6 1_555 -0.244 -0.110 0.129 -7.008 -15.443 -0.596 10 C_DG12:DC22_D C 12 ? D 22 ? 19 1 1 A DT 13 1_555 B DA 5 1_555 -0.043 -0.126 0.192 -6.680 -10.776 4.351 11 C_DT13:DA21_D C 13 ? D 21 ? 20 1 1 A DG 14 1_555 B DC 4 1_555 0.450 -3.427 -0.532 12.424 4.085 69.889 12 C_DG14:DC20_D C 14 ? D 20 ? ? ? 1 A DG 15 1_555 B DC 3 1_555 -0.234 -0.177 0.022 -0.633 -9.407 0.156 13 C_DG15:DC19_D C 15 ? D 19 ? 19 1 1 A DG 16 1_555 B DC 2 1_555 -0.331 -0.155 -0.151 -10.901 -11.429 1.478 14 C_DG16:DC18_D C 16 ? D 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 3 1_555 B DA 15 1_555 A DA 4 1_555 B DT 14 1_555 0.459 -0.663 3.299 0.419 6.737 28.927 -2.692 -0.809 3.075 13.260 -0.824 29.688 1 CC_DT3DA4:DT30DA31_DD C 3 ? D 31 ? C 4 ? D 30 ? 1 A DA 4 1_555 B DT 14 1_555 A DA 5 1_555 B DT 13 1_555 -0.168 -0.225 3.195 -0.170 3.673 35.230 -0.895 0.253 3.157 6.047 0.281 35.415 2 CC_DA4DA5:DT29DT30_DD C 4 ? D 30 ? C 5 ? D 29 ? 1 A DA 5 1_555 B DT 13 1_555 A DA 6 1_555 B DT 12 1_555 0.137 -0.779 3.502 -0.230 4.087 30.950 -2.267 -0.300 3.373 7.617 0.429 31.213 3 CC_DA5DA6:DT28DT29_DD C 5 ? D 29 ? C 6 ? D 28 ? 1 A DA 6 1_555 B DT 12 1_555 A DA 7 1_555 B DT 11 1_555 -0.180 -0.883 3.471 -3.323 4.907 33.260 -2.350 -0.253 3.313 8.489 5.748 33.769 4 CC_DA6DA7:DT27DT28_DD C 6 ? D 28 ? C 7 ? D 27 ? 1 A DA 7 1_555 B DT 11 1_555 A DG 8 1_555 B DC 10 1_555 -0.062 -0.787 3.131 0.086 4.917 21.442 -3.827 0.195 2.879 12.996 -0.229 21.992 5 CC_DA7DG8:DC26DT27_DD C 7 ? D 27 ? C 8 ? D 26 ? 1 A DG 8 1_555 B DC 10 1_555 A DG 9 1_555 B DC 9 1_555 -0.990 -0.145 3.258 -3.031 4.441 35.166 -0.888 1.176 3.287 7.297 4.980 35.562 6 CC_DG8DG9:DC25DC26_DD C 8 ? D 26 ? C 9 ? D 25 ? 1 A DG 9 1_555 B DC 9 1_555 A DA 10 1_555 B DT 8 1_555 0.223 -0.430 3.259 0.482 4.070 31.519 -1.523 -0.321 3.183 7.454 -0.882 31.778 7 CC_DG9DA10:DT24DC25_DD C 9 ? D 25 ? C 10 ? D 24 ? 1 A DA 10 1_555 B DT 8 1_555 A DA 11 1_555 B DT 7 1_555 -0.110 -0.104 3.358 0.417 3.211 34.747 -0.672 0.249 3.334 5.362 -0.696 34.893 8 CC_DA10DA11:DT23DT24_DD C 10 ? D 24 ? C 11 ? D 23 ? 1 A DA 11 1_555 B DT 7 1_555 A DG 12 1_555 B DC 6 1_555 -0.155 -0.892 3.459 -3.624 4.323 38.897 -1.864 -0.221 3.345 6.451 5.407 39.288 9 CC_DA11DG12:DC22DT23_DD C 11 ? D 23 ? C 12 ? D 22 ? 1 A DG 12 1_555 B DC 6 1_555 A DT 13 1_555 B DA 5 1_555 -0.923 -0.966 3.308 -0.387 1.024 26.361 -2.392 1.917 3.282 2.245 0.848 26.383 10 CC_DG12DT13:DA21DC22_DD C 12 ? D 22 ? C 13 ? D 21 ? 1 A DT 13 1_555 B DA 5 1_555 A DG 14 1_555 B DC 4 1_555 -2.322 3.480 -0.419 172.716 -15.834 -146.380 -1.740 -1.166 0.358 7.930 86.497 -178.104 11 CC_DT13DG14:DC20DA21_DD C 13 ? D 21 ? C 14 ? D 20 ? 1 A DG 14 1_555 B DC 4 1_555 A DG 15 1_555 B DC 3 1_555 -0.411 -3.730 -1.338 137.379 -106.588 161.858 -1.922 0.132 -1.012 -53.317 -68.720 179.036 12 CC_DG14DG15:DC19DC20_DD C 14 ? D 20 ? C 15 ? D 19 ? 1 A DG 15 1_555 B DC 3 1_555 A DG 16 1_555 B DC 2 1_555 0.970 -0.382 3.565 3.581 1.935 31.669 -1.081 -1.046 3.621 3.527 -6.529 31.923 13 CC_DG15DG16:DC18DC19_DD C 15 ? D 19 ? C 16 ? D 18 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' 'United States' HL155178 1 'National Science Foundation (NSF, United States)' 'United States' MCB2028902 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM137160 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM111749 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8E3K _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8UFF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.023303 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011546 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016586 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025140 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? SE ? ? 26.02326 7.89457 ? ? 1.54240 29.12501 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_