data_8UFZ # _entry.id 8UFZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8UFZ pdb_00008ufz 10.2210/pdb8ufz/pdb WWPDB D_1000278009 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8UFZ _pdbx_database_status.recvd_initial_deposition_date 2023-10-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 8UFF unspecified PDB . 8T4N unspecified PDB . 8UFK unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 wdw@gsu.edu W Wilson David 'principal investigator/group leader' 0000-0001-5225-5089 5 gpoon@gsu.edu Gregory Poon MK 'principal investigator/group leader' 0000-0001-5107-9458 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Terrell, J.R.' 1 0000-0001-5394-5663 'Poon, G.M.K.' 2 0000-0001-5107-9458 'Wilson, W.D.' 3 0000-0001-5225-5089 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural studies on the PU.1 inhibitory mechanism by diamidine minor groove binders' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terrell, J.R.' 1 0000-0001-5394-5663 primary 'Paul, A.' 2 ? primary 'Ogbonna, E.N.' 3 ? primary 'Farahat, A.A.' 4 ? primary 'Poon, G.M.K.' 5 0000-0001-5107-9458 primary 'Wilson, W.D.' 6 0000-0001-5225-5089 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*G)-3') ; 5004.293 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*TP*TP*AP*T)-3') ; 4790.113 2 ? ? ? ? 3 polymer man 'Transcription factor PU.1' 12436.583 2 ? ? 'ETS-Domain UNP residues 165-270' ? 4 non-polymer syn "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" 447.355 2 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '31 kDa-transforming protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DA)(DA)(DA)(DA)(DG)(DC)(DG)(DG)(DA)(DA)(DG)(DT)(DG)' AATAAAAGCGGAAGTG A,C ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DC)(DT)(DT)(DC)(DC)(DG)(DC)(DT)(DT)(DT)(DT)(DA)(DT)' TCACTTCCGCTTTTAT B,D ? 3 'polypeptide(L)' no no ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; E,F ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" _pdbx_entity_nonpoly.comp_id Y5U # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DT n 1 4 DA n 1 5 DA n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DC n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DA n 1 14 DG n 1 15 DT n 1 16 DG n 2 1 DT n 2 2 DC n 2 3 DA n 2 4 DC n 2 5 DT n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DA n 2 16 DT n 3 1 GLY n 3 2 SER n 3 3 LYS n 3 4 LYS n 3 5 LYS n 3 6 ILE n 3 7 ARG n 3 8 LEU n 3 9 TYR n 3 10 GLN n 3 11 PHE n 3 12 LEU n 3 13 LEU n 3 14 ASP n 3 15 LEU n 3 16 LEU n 3 17 ARG n 3 18 SER n 3 19 GLY n 3 20 ASP n 3 21 MET n 3 22 LYS n 3 23 ASP n 3 24 SER n 3 25 ILE n 3 26 TRP n 3 27 TRP n 3 28 VAL n 3 29 ASP n 3 30 LYS n 3 31 ASP n 3 32 LYS n 3 33 GLY n 3 34 THR n 3 35 PHE n 3 36 GLN n 3 37 PHE n 3 38 SER n 3 39 SER n 3 40 LYS n 3 41 HIS n 3 42 LYS n 3 43 GLU n 3 44 ALA n 3 45 LEU n 3 46 ALA n 3 47 HIS n 3 48 ARG n 3 49 TRP n 3 50 GLY n 3 51 ILE n 3 52 GLN n 3 53 LYS n 3 54 GLY n 3 55 ASN n 3 56 ARG n 3 57 LYS n 3 58 LYS n 3 59 MET n 3 60 THR n 3 61 TYR n 3 62 GLN n 3 63 LYS n 3 64 MET n 3 65 ALA n 3 66 ARG n 3 67 ALA n 3 68 LEU n 3 69 ARG n 3 70 ASN n 3 71 TYR n 3 72 GLY n 3 73 LYS n 3 74 THR n 3 75 GLY n 3 76 GLU n 3 77 VAL n 3 78 LYS n 3 79 LYS n 3 80 VAL n 3 81 LYS n 3 82 LYS n 3 83 LYS n 3 84 LEU n 3 85 THR n 3 86 TYR n 3 87 GLN n 3 88 PHE n 3 89 SER n 3 90 GLY n 3 91 GLU n 3 92 VAL n 3 93 LEU n 3 94 GLY n 3 95 ARG n 3 96 GLY n 3 97 GLY n 3 98 LEU n 3 99 ALA n 3 100 GLU n 3 101 ARG n 3 102 ARG n 3 103 HIS n 3 104 PRO n 3 105 PRO n 3 106 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 106 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPI1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Y5U non-polymer . "(2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide)" ? 'C20 H16 N8 Se' 447.355 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DT 15 15 15 DT DT A . n A 1 16 DG 16 16 16 DG DG A . n B 2 1 DT 1 17 17 DT DT B . n B 2 2 DC 2 18 18 DC DC B . n B 2 3 DA 3 19 19 DA DA B . n B 2 4 DC 4 20 20 DC DC B . n B 2 5 DT 5 21 21 DT DT B . n B 2 6 DT 6 22 22 DT DT B . n B 2 7 DC 7 23 23 DC DC B . n B 2 8 DC 8 24 24 DC DC B . n B 2 9 DG 9 25 25 DG DG B . n B 2 10 DC 10 26 26 DC DC B . n B 2 11 DT 11 27 27 DT DT B . n B 2 12 DT 12 28 28 DT DT B . n B 2 13 DT 13 29 29 DT DT B . n B 2 14 DT 14 30 30 DT DT B . n B 2 15 DA 15 31 31 DA DA B . n B 2 16 DT 16 32 32 DT DT B . n C 1 1 DA 1 1 1 DA DA C . n C 1 2 DA 2 2 2 DA DA C . n C 1 3 DT 3 3 3 DT DT C . n C 1 4 DA 4 4 4 DA DA C . n C 1 5 DA 5 5 5 DA DA C . n C 1 6 DA 6 6 6 DA DA C . n C 1 7 DA 7 7 7 DA DA C . n C 1 8 DG 8 8 8 DG DG C . n C 1 9 DC 9 9 9 DC DC C . n C 1 10 DG 10 10 10 DG DG C . n C 1 11 DG 11 11 11 DG DG C . n C 1 12 DA 12 12 12 DA DA C . n C 1 13 DA 13 13 13 DA DA C . n C 1 14 DG 14 14 14 DG DG C . n C 1 15 DT 15 15 15 DT DT C . n C 1 16 DG 16 16 16 DG DG C . n D 2 1 DT 1 17 17 DT DT D . n D 2 2 DC 2 18 18 DC DC D . n D 2 3 DA 3 19 19 DA DA D . n D 2 4 DC 4 20 20 DC DC D . n D 2 5 DT 5 21 21 DT DT D . n D 2 6 DT 6 22 22 DT DT D . n D 2 7 DC 7 23 23 DC DC D . n D 2 8 DC 8 24 24 DC DC D . n D 2 9 DG 9 25 25 DG DG D . n D 2 10 DC 10 26 26 DC DC D . n D 2 11 DT 11 27 27 DT DT D . n D 2 12 DT 12 28 28 DT DT D . n D 2 13 DT 13 29 29 DT DT D . n D 2 14 DT 14 30 30 DT DT D . n D 2 15 DA 15 31 31 DA DA D . n D 2 16 DT 16 32 32 DT DT D . n E 3 1 GLY 1 165 ? ? ? E . n E 3 2 SER 2 166 ? ? ? E . n E 3 3 LYS 3 167 ? ? ? E . n E 3 4 LYS 4 168 ? ? ? E . n E 3 5 LYS 5 169 169 LYS LYS E . n E 3 6 ILE 6 170 170 ILE ILE E . n E 3 7 ARG 7 171 171 ARG ARG E . n E 3 8 LEU 8 172 172 LEU LEU E . n E 3 9 TYR 9 173 173 TYR TYR E . n E 3 10 GLN 10 174 174 GLN GLN E . n E 3 11 PHE 11 175 175 PHE PHE E . n E 3 12 LEU 12 176 176 LEU LEU E . n E 3 13 LEU 13 177 177 LEU LEU E . n E 3 14 ASP 14 178 178 ASP ASP E . n E 3 15 LEU 15 179 179 LEU LEU E . n E 3 16 LEU 16 180 180 LEU LEU E . n E 3 17 ARG 17 181 181 ARG ARG E . n E 3 18 SER 18 182 182 SER SER E . n E 3 19 GLY 19 183 183 GLY GLY E . n E 3 20 ASP 20 184 184 ASP ASP E . n E 3 21 MET 21 185 185 MET MET E . n E 3 22 LYS 22 186 186 LYS LYS E . n E 3 23 ASP 23 187 187 ASP ASP E . n E 3 24 SER 24 188 188 SER SER E . n E 3 25 ILE 25 189 189 ILE ILE E . n E 3 26 TRP 26 190 190 TRP TRP E . n E 3 27 TRP 27 191 191 TRP TRP E . n E 3 28 VAL 28 192 192 VAL VAL E . n E 3 29 ASP 29 193 193 ASP ASP E . n E 3 30 LYS 30 194 194 LYS LYS E . n E 3 31 ASP 31 195 195 ASP ASP E . n E 3 32 LYS 32 196 196 LYS LYS E . n E 3 33 GLY 33 197 197 GLY GLY E . n E 3 34 THR 34 198 198 THR THR E . n E 3 35 PHE 35 199 199 PHE PHE E . n E 3 36 GLN 36 200 200 GLN GLN E . n E 3 37 PHE 37 201 201 PHE PHE E . n E 3 38 SER 38 202 202 SER SER E . n E 3 39 SER 39 203 203 SER SER E . n E 3 40 LYS 40 204 204 LYS LYS E . n E 3 41 HIS 41 205 205 HIS HIS E . n E 3 42 LYS 42 206 206 LYS LYS E . n E 3 43 GLU 43 207 207 GLU GLU E . n E 3 44 ALA 44 208 208 ALA ALA E . n E 3 45 LEU 45 209 209 LEU LEU E . n E 3 46 ALA 46 210 210 ALA ALA E . n E 3 47 HIS 47 211 211 HIS HIS E . n E 3 48 ARG 48 212 212 ARG ARG E . n E 3 49 TRP 49 213 213 TRP TRP E . n E 3 50 GLY 50 214 214 GLY GLY E . n E 3 51 ILE 51 215 215 ILE ILE E . n E 3 52 GLN 52 216 216 GLN GLN E . n E 3 53 LYS 53 217 217 LYS LYS E . n E 3 54 GLY 54 218 218 GLY GLY E . n E 3 55 ASN 55 219 219 ASN ASN E . n E 3 56 ARG 56 220 220 ARG ARG E . n E 3 57 LYS 57 221 221 LYS LYS E . n E 3 58 LYS 58 222 222 LYS LYS E . n E 3 59 MET 59 223 223 MET MET E . n E 3 60 THR 60 224 224 THR THR E . n E 3 61 TYR 61 225 225 TYR TYR E . n E 3 62 GLN 62 226 226 GLN GLN E . n E 3 63 LYS 63 227 227 LYS LYS E . n E 3 64 MET 64 228 228 MET MET E . n E 3 65 ALA 65 229 229 ALA ALA E . n E 3 66 ARG 66 230 230 ARG ARG E . n E 3 67 ALA 67 231 231 ALA ALA E . n E 3 68 LEU 68 232 232 LEU LEU E . n E 3 69 ARG 69 233 233 ARG ARG E . n E 3 70 ASN 70 234 234 ASN ASN E . n E 3 71 TYR 71 235 235 TYR TYR E . n E 3 72 GLY 72 236 236 GLY GLY E . n E 3 73 LYS 73 237 237 LYS LYS E . n E 3 74 THR 74 238 238 THR THR E . n E 3 75 GLY 75 239 239 GLY GLY E . n E 3 76 GLU 76 240 240 GLU GLU E . n E 3 77 VAL 77 241 241 VAL VAL E . n E 3 78 LYS 78 242 242 LYS LYS E . n E 3 79 LYS 79 243 243 LYS LYS E . n E 3 80 VAL 80 244 244 VAL VAL E . n E 3 81 LYS 81 245 245 LYS LYS E . n E 3 82 LYS 82 246 246 LYS LYS E . n E 3 83 LYS 83 247 247 LYS LYS E . n E 3 84 LEU 84 248 248 LEU LEU E . n E 3 85 THR 85 249 249 THR THR E . n E 3 86 TYR 86 250 250 TYR TYR E . n E 3 87 GLN 87 251 251 GLN GLN E . n E 3 88 PHE 88 252 252 PHE PHE E . n E 3 89 SER 89 253 253 SER SER E . n E 3 90 GLY 90 254 254 GLY GLY E . n E 3 91 GLU 91 255 255 GLU GLU E . n E 3 92 VAL 92 256 256 VAL VAL E . n E 3 93 LEU 93 257 257 LEU LEU E . n E 3 94 GLY 94 258 258 GLY GLY E . n E 3 95 ARG 95 259 ? ? ? E . n E 3 96 GLY 96 260 ? ? ? E . n E 3 97 GLY 97 261 ? ? ? E . n E 3 98 LEU 98 262 ? ? ? E . n E 3 99 ALA 99 263 ? ? ? E . n E 3 100 GLU 100 264 ? ? ? E . n E 3 101 ARG 101 265 ? ? ? E . n E 3 102 ARG 102 266 ? ? ? E . n E 3 103 HIS 103 267 ? ? ? E . n E 3 104 PRO 104 268 ? ? ? E . n E 3 105 PRO 105 269 ? ? ? E . n E 3 106 HIS 106 270 ? ? ? E . n F 3 1 GLY 1 165 ? ? ? F . n F 3 2 SER 2 166 ? ? ? F . n F 3 3 LYS 3 167 ? ? ? F . n F 3 4 LYS 4 168 ? ? ? F . n F 3 5 LYS 5 169 169 LYS LYS F . n F 3 6 ILE 6 170 170 ILE ILE F . n F 3 7 ARG 7 171 171 ARG ARG F . n F 3 8 LEU 8 172 172 LEU LEU F . n F 3 9 TYR 9 173 173 TYR TYR F . n F 3 10 GLN 10 174 174 GLN GLN F . n F 3 11 PHE 11 175 175 PHE PHE F . n F 3 12 LEU 12 176 176 LEU LEU F . n F 3 13 LEU 13 177 177 LEU LEU F . n F 3 14 ASP 14 178 178 ASP ASP F . n F 3 15 LEU 15 179 179 LEU LEU F . n F 3 16 LEU 16 180 180 LEU LEU F . n F 3 17 ARG 17 181 181 ARG ARG F . n F 3 18 SER 18 182 182 SER SER F . n F 3 19 GLY 19 183 183 GLY GLY F . n F 3 20 ASP 20 184 184 ASP ASP F . n F 3 21 MET 21 185 185 MET MET F . n F 3 22 LYS 22 186 186 LYS LYS F . n F 3 23 ASP 23 187 187 ASP ASP F . n F 3 24 SER 24 188 188 SER SER F . n F 3 25 ILE 25 189 189 ILE ILE F . n F 3 26 TRP 26 190 190 TRP TRP F . n F 3 27 TRP 27 191 191 TRP TRP F . n F 3 28 VAL 28 192 192 VAL VAL F . n F 3 29 ASP 29 193 193 ASP ASP F . n F 3 30 LYS 30 194 194 LYS LYS F . n F 3 31 ASP 31 195 195 ASP ASP F . n F 3 32 LYS 32 196 196 LYS LYS F . n F 3 33 GLY 33 197 197 GLY GLY F . n F 3 34 THR 34 198 198 THR THR F . n F 3 35 PHE 35 199 199 PHE PHE F . n F 3 36 GLN 36 200 200 GLN GLN F . n F 3 37 PHE 37 201 201 PHE PHE F . n F 3 38 SER 38 202 202 SER SER F . n F 3 39 SER 39 203 203 SER SER F . n F 3 40 LYS 40 204 204 LYS LYS F . n F 3 41 HIS 41 205 205 HIS HIS F . n F 3 42 LYS 42 206 206 LYS LYS F . n F 3 43 GLU 43 207 207 GLU GLU F . n F 3 44 ALA 44 208 208 ALA ALA F . n F 3 45 LEU 45 209 209 LEU LEU F . n F 3 46 ALA 46 210 210 ALA ALA F . n F 3 47 HIS 47 211 211 HIS HIS F . n F 3 48 ARG 48 212 212 ARG ARG F . n F 3 49 TRP 49 213 213 TRP TRP F . n F 3 50 GLY 50 214 214 GLY GLY F . n F 3 51 ILE 51 215 215 ILE ILE F . n F 3 52 GLN 52 216 216 GLN GLN F . n F 3 53 LYS 53 217 217 LYS LYS F . n F 3 54 GLY 54 218 218 GLY GLY F . n F 3 55 ASN 55 219 219 ASN ASN F . n F 3 56 ARG 56 220 220 ARG ARG F . n F 3 57 LYS 57 221 221 LYS LYS F . n F 3 58 LYS 58 222 222 LYS LYS F . n F 3 59 MET 59 223 223 MET MET F . n F 3 60 THR 60 224 224 THR THR F . n F 3 61 TYR 61 225 225 TYR TYR F . n F 3 62 GLN 62 226 226 GLN GLN F . n F 3 63 LYS 63 227 227 LYS LYS F . n F 3 64 MET 64 228 228 MET MET F . n F 3 65 ALA 65 229 229 ALA ALA F . n F 3 66 ARG 66 230 230 ARG ARG F . n F 3 67 ALA 67 231 231 ALA ALA F . n F 3 68 LEU 68 232 232 LEU LEU F . n F 3 69 ARG 69 233 233 ARG ARG F . n F 3 70 ASN 70 234 234 ASN ASN F . n F 3 71 TYR 71 235 235 TYR TYR F . n F 3 72 GLY 72 236 236 GLY GLY F . n F 3 73 LYS 73 237 237 LYS LYS F . n F 3 74 THR 74 238 238 THR THR F . n F 3 75 GLY 75 239 239 GLY GLY F . n F 3 76 GLU 76 240 240 GLU GLU F . n F 3 77 VAL 77 241 241 VAL VAL F . n F 3 78 LYS 78 242 242 LYS LYS F . n F 3 79 LYS 79 243 243 LYS LYS F . n F 3 80 VAL 80 244 244 VAL VAL F . n F 3 81 LYS 81 245 245 LYS LYS F . n F 3 82 LYS 82 246 246 LYS LYS F . n F 3 83 LYS 83 247 247 LYS LYS F . n F 3 84 LEU 84 248 248 LEU LEU F . n F 3 85 THR 85 249 249 THR THR F . n F 3 86 TYR 86 250 250 TYR TYR F . n F 3 87 GLN 87 251 251 GLN GLN F . n F 3 88 PHE 88 252 252 PHE PHE F . n F 3 89 SER 89 253 253 SER SER F . n F 3 90 GLY 90 254 254 GLY GLY F . n F 3 91 GLU 91 255 255 GLU GLU F . n F 3 92 VAL 92 256 256 VAL VAL F . n F 3 93 LEU 93 257 257 LEU LEU F . n F 3 94 GLY 94 258 258 GLY GLY F . n F 3 95 ARG 95 259 259 ARG ARG F . n F 3 96 GLY 96 260 ? ? ? F . n F 3 97 GLY 97 261 ? ? ? F . n F 3 98 LEU 98 262 ? ? ? F . n F 3 99 ALA 99 263 ? ? ? F . n F 3 100 GLU 100 264 ? ? ? F . n F 3 101 ARG 101 265 ? ? ? F . n F 3 102 ARG 102 266 ? ? ? F . n F 3 103 HIS 103 267 ? ? ? F . n F 3 104 PRO 104 268 ? ? ? F . n F 3 105 PRO 105 269 ? ? ? F . n F 3 106 HIS 106 270 ? ? ? F . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id Y5U _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id Y5U _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 Y5U 1 101 99 Y5U 976 B . H 4 Y5U 1 101 103 Y5U 976 D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 E LYS 169 ? CG ? E LYS 5 CG 2 1 Y 1 E LYS 169 ? CD ? E LYS 5 CD 3 1 Y 1 E LYS 169 ? CE ? E LYS 5 CE 4 1 Y 1 E LYS 169 ? NZ ? E LYS 5 NZ 5 1 Y 0 E ASP 184 ? C ? E ASP 20 C 6 1 Y 1 E LYS 186 ? CG ? E LYS 22 CG 7 1 Y 1 E LYS 186 ? CD ? E LYS 22 CD 8 1 Y 1 E LYS 186 ? CE ? E LYS 22 CE 9 1 Y 1 E LYS 186 ? NZ ? E LYS 22 NZ 10 1 Y 1 E LYS 194 ? CG ? E LYS 30 CG 11 1 Y 1 E LYS 194 ? CD ? E LYS 30 CD 12 1 Y 1 E LYS 194 ? CE ? E LYS 30 CE 13 1 Y 1 E LYS 194 ? NZ ? E LYS 30 NZ 14 1 Y 1 E LYS 204 ? CG ? E LYS 40 CG 15 1 Y 1 E LYS 204 ? CD ? E LYS 40 CD 16 1 Y 1 E LYS 204 ? CE ? E LYS 40 CE 17 1 Y 1 E LYS 204 ? NZ ? E LYS 40 NZ 18 1 Y 0 E ARG 220 ? CZ ? E ARG 56 CZ 19 1 Y 0 E LYS 237 ? O ? E LYS 73 O 20 1 Y 0 E LYS 237 ? CG ? E LYS 73 CG 21 1 Y 0 E GLU 255 ? OE2 ? E GLU 91 OE2 22 1 Y 1 F LYS 169 ? CG ? F LYS 5 CG 23 1 Y 1 F LYS 169 ? CD ? F LYS 5 CD 24 1 Y 1 F LYS 169 ? CE ? F LYS 5 CE 25 1 Y 1 F LYS 169 ? NZ ? F LYS 5 NZ 26 1 Y 1 F LYS 186 ? CG ? F LYS 22 CG 27 1 Y 1 F LYS 186 ? CD ? F LYS 22 CD 28 1 Y 1 F LYS 186 ? CE ? F LYS 22 CE 29 1 Y 1 F LYS 186 ? NZ ? F LYS 22 NZ 30 1 Y 1 F LYS 194 ? CG ? F LYS 30 CG 31 1 Y 1 F LYS 194 ? CD ? F LYS 30 CD 32 1 Y 1 F LYS 194 ? CE ? F LYS 30 CE 33 1 Y 1 F LYS 194 ? NZ ? F LYS 30 NZ 34 1 Y 0 F LYS 204 ? CD ? F LYS 40 CD 35 1 Y 0 F LYS 204 ? CE ? F LYS 40 CE 36 1 Y 0 F ARG 220 ? CZ ? F ARG 56 CZ 37 1 Y 0 F LYS 237 ? O ? F LYS 73 O 38 1 Y 0 F LYS 237 ? CG ? F LYS 73 CG 39 1 Y 1 F LYS 242 ? CG ? F LYS 78 CG 40 1 Y 1 F LYS 242 ? CD ? F LYS 78 CD 41 1 Y 1 F LYS 242 ? CE ? F LYS 78 CE 42 1 Y 1 F LYS 242 ? NZ ? F LYS 78 NZ 43 1 Y 0 F LYS 247 ? CG ? F LYS 83 CG # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 113.837 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8UFZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.375 _cell.length_a_esd ? _cell.length_b 74.446 _cell.length_b_esd ? _cell.length_c 58.097 _cell.length_c_esd ? _cell.volume 219072.044 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8UFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8UFZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100mM TRIS Base (HCl adjusted), pH=8.5, 200mM Ammonium Acetate, 24% PEG3350 1:1 hanging drop with 250uM protein/DNA complex - Ligand incorporated via soaking at 500uM concentration 24h ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-15 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Horizontal double crystal monochromator (DCM)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.920119 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.920119 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-2 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 96.42 _reflns.entry_id 8UFZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.06 _reflns.d_resolution_low 29.29 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8196 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.109 _reflns.pdbx_Rpim_I_all 0.052 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.06 _reflns_shell.d_res_low 3.27 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1485 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.29 _reflns_shell.pdbx_Rpim_I_all 0.138 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.982 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.254 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 126.32 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8UFZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.06 _refine.ls_d_res_low 29.29 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7889 _refine.ls_number_reflns_R_free 783 _refine.ls_number_reflns_R_work 7106 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.71 _refine.ls_percent_reflns_R_free 9.93 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2598 _refine.ls_R_factor_R_free 0.2860 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2570 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.6066 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4850 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.06 _refine_hist.d_res_low 29.29 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2837 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1795 _refine_hist.pdbx_number_atoms_nucleic_acid 984 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0038 ? 3040 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8084 ? 4363 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0379 ? 458 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0021 ? 326 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 23.5856 ? 1253 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.ncs_model_details 1 'X-RAY DIFFRACTION' d_2 ens_1 0.708011681404 ? ? ? 'Torsion NCS' A A ? ? ? ? 2 'X-RAY DIFFRACTION' d_2 ens_2 0.749317820453 ? ? ? 'Torsion NCS' B B ? ? ? ? 3 'X-RAY DIFFRACTION' d_2 ens_3 0.625516231388 ? ? ? 'Torsion NCS' E E ? ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 3.06 3.25 . . 121 1135 91.61 . . . . 0.4064 . . . . . . . . . . . 0.4184 'X-RAY DIFFRACTION' 3.25 3.50 . . 125 1104 90.84 . . . . 0.3869 . . . . . . . . . . . 0.3389 'X-RAY DIFFRACTION' 3.50 3.85 . . 126 1173 95.03 . . . . 0.3286 . . . . . . . . . . . 0.3751 'X-RAY DIFFRACTION' 3.85 4.41 . . 128 1216 97.82 . . . . 0.2713 . . . . . . . . . . . 0.3502 'X-RAY DIFFRACTION' 4.41 5.55 . . 144 1225 99.27 . . . . 0.2703 . . . . . . . . . . . 0.2754 'X-RAY DIFFRACTION' 5.56 29.29 . . 139 1253 99.50 . . . . 0.1874 . . . . . . . . . . . 0.2235 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 0.481330376958 0.0654643890686 0.87409123207 -0.0287215085145 -0.995493778018 0.0903726334521 0.876068572183 -0.0686043124905 -0.477281159424 -0.4713956089 -21.1190908452 8.29760053585 ? 2 given 0.483186927513 0.0796146441198 0.871889844833 -0.0280133929205 -0.993941121474 0.106284038593 0.875068936083 -0.0757796508579 -0.478029080306 -0.429687164958 -20.8894136195 8.08330783081 ? 3 given 0.486816628082 0.0293002129987 0.873012639164 0.123630994547 -0.991687430022 -0.0356569533679 0.864710904181 0.125289818639 -0.486392345268 -6.82460911173 -21.4944833837 6.95298568369 ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "A" ; ens_1 d_2 ;(chain "C" and resid 1 through 16) ; ens_2 d_1 ;(chain "B" and resid 17 through 32) ; ens_2 d_2 ;chain "D" ; ens_3 d_1 ;(chain "E" and (resid 169 through 211 or resid 213 through 241 or (resid 242 and (name N or name CA or name C or name O or name CB )) or resid 243 through 258)) ; ens_3 d_2 ;(chain "F" and (resid 169 through 203 or (resid 204 and (name N or name CA or name C or name O or name CB )) or resid 205 through 211 or resid 213 through 258)) ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 A DA 1 . A DG 8 . A DA 1 A DG 8 ? ? ens_1 d_2 1 C DA 1 . C DG 8 . C DA 1 C DG 8 ? ? ens_2 d_1 1 B DT 1 . B DT 1 . B DT 17 B DT 17 ? ? ens_2 d_2 1 D DT 1 . D DT 1 . D DT 17 D DT 17 ? ? ens_3 d_1 1 E LYS 5 . E HIS 47 . E LYS 169 E HIS 211 ? ? ens_3 d_1 2 E TRP 49 . E GLY 94 . E TRP 213 E GLY 258 ? ? ens_3 d_2 1 F LYS 5 . F HIS 47 . F LYS 169 F HIS 211 ? ? ens_3 d_2 2 F TRP 49 . F GLY 94 . F TRP 213 F GLY 258 ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details ens_1 ? ens_2 ? ens_3 ? # loop_ _struct_ncs_ens_gen.ens_id _struct_ncs_ens_gen.dom_id_1 _struct_ncs_ens_gen.dom_id_2 _struct_ncs_ens_gen.oper_id ens_1 d_2 d_1 1 ens_2 d_2 d_1 2 ens_3 d_2 d_1 3 # _struct.entry_id 8UFZ _struct.title 'Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGCGGAAGTG) in Ternary Complex with DB1976' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8UFZ _struct_keywords.text ;transcription factor, protein-DNA complex, ETS family, ETS, PU.1, TRANSCRIPTION-DNA complex, diamidine, minor-groove binder, transcription inhibition, TRANSCRIPTION ; _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8UFZ 8UFZ ? 1 ? 1 2 PDB 8UFZ 8UFZ ? 2 ? 1 3 UNP SPI1_HUMAN P17947 ? 3 ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; 165 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8UFZ A 1 ? 16 ? 8UFZ 1 ? 16 ? 1 16 2 2 8UFZ B 1 ? 16 ? 8UFZ 17 ? 32 ? 17 32 3 1 8UFZ C 1 ? 16 ? 8UFZ 1 ? 16 ? 1 16 4 2 8UFZ D 1 ? 16 ? 8UFZ 17 ? 32 ? 17 32 5 3 8UFZ E 1 ? 106 ? P17947 165 ? 270 ? 165 270 6 3 8UFZ F 1 ? 106 ? P17947 165 ? 270 ? 165 270 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,F,G 2 1 C,D,E,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG E 7 ? GLY E 19 ? ARG E 171 GLY E 183 1 ? 13 HELX_P HELX_P2 AA2 HIS E 41 ? GLY E 54 ? HIS E 205 GLY E 218 1 ? 14 HELX_P HELX_P3 AA3 THR E 60 ? ARG E 69 ? THR E 224 ARG E 233 1 ? 10 HELX_P HELX_P4 AA4 ASN E 70 ? GLY E 75 ? ASN E 234 GLY E 239 1 ? 6 HELX_P HELX_P5 AA5 SER E 89 ? GLY E 94 ? SER E 253 GLY E 258 1 ? 6 HELX_P HELX_P6 AA6 ARG F 7 ? GLY F 19 ? ARG F 171 GLY F 183 1 ? 13 HELX_P HELX_P7 AA7 HIS F 41 ? GLY F 54 ? HIS F 205 GLY F 218 1 ? 14 HELX_P HELX_P8 AA8 THR F 60 ? ARG F 69 ? THR F 224 ARG F 233 1 ? 10 HELX_P HELX_P9 AA9 ASN F 70 ? LYS F 73 ? ASN F 234 LYS F 237 5 ? 4 HELX_P HELX_P10 AB1 SER F 89 ? GLY F 94 ? SER F 253 GLY F 258 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 16 N3 ? ? A DA 2 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 16 O4 ? ? A DA 2 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 15 N1 ? ? A DT 3 B DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 15 N6 ? ? A DT 3 B DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? A DA 4 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? A DA 4 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 5 B DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 5 B DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 6 B DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 6 B DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 11 N3 ? ? A DA 7 B DT 27 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog12 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 N3 ? ? A DG 8 B DC 26 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog13 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 9 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 9 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 9 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 10 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 10 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 10 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 11 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 11 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 11 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 12 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 12 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 13 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 13 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 14 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 14 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 14 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DC 2 N4 ? ? A DT 15 B DC 18 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog30 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 15 B DA 19 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog31 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 16 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 16 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 16 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 16 N3 ? ? C DA 2 D DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 16 O4 ? ? C DA 2 D DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 5 D DT 28 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog41 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 5 D DT 29 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog42 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 6 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 6 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 7 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 7 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 10 N3 ? ? C DG 8 D DC 26 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog47 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 9 N2 ? ? C DC 9 D DG 25 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog48 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 10 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 10 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 10 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 11 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 11 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 11 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 12 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 12 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 13 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 13 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DA 3 N1 ? ? C DG 14 D DA 19 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog59 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DA 3 N6 ? ? C DG 14 D DA 19 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog60 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 4 N3 ? ? C DG 14 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 4 O2 ? ? C DG 14 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 4 N4 ? ? C DG 14 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C DT 15 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 15 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C DT 15 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 15 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C DG 16 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE E 25 ? ASP E 29 ? ILE E 189 ASP E 193 AA1 2 THR E 34 ? PHE E 37 ? THR E 198 PHE E 201 AA1 3 THR E 85 ? PHE E 88 ? THR E 249 PHE E 252 AA1 4 VAL E 77 ? LYS E 79 ? VAL E 241 LYS E 243 AA2 1 ILE F 25 ? ASP F 29 ? ILE F 189 ASP F 193 AA2 2 THR F 34 ? PHE F 37 ? THR F 198 PHE F 201 AA2 3 THR F 85 ? PHE F 88 ? THR F 249 PHE F 252 AA2 4 VAL F 77 ? LYS F 79 ? VAL F 241 LYS F 243 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP E 26 ? N TRP E 190 O GLN E 36 ? O GLN E 200 AA1 2 3 N PHE E 35 ? N PHE E 199 O TYR E 86 ? O TYR E 250 AA1 3 4 O GLN E 87 ? O GLN E 251 N LYS E 78 ? N LYS E 242 AA2 1 2 N TRP F 26 ? N TRP F 190 O GLN F 36 ? O GLN F 200 AA2 2 3 N PHE F 35 ? N PHE F 199 O TYR F 86 ? O TYR F 250 AA2 3 4 O GLN F 87 ? O GLN F 251 N LYS F 78 ? N LYS F 242 # _pdbx_entry_details.entry_id 8UFZ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP1 _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 DA _pdbx_validate_close_contact.auth_seq_id_1 7 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HG _pdbx_validate_close_contact.auth_asym_id_2 E _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 203 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.60 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DT 28 ? ? "C1'" B DT 28 ? ? N1 B DT 28 ? ? 110.24 108.30 1.94 0.30 N 2 1 "O4'" C DA 2 ? ? "C1'" C DA 2 ? ? N9 C DA 2 ? ? 110.40 108.30 2.10 0.30 N 3 1 "O4'" D DA 19 ? ? "C1'" D DA 19 ? ? N9 D DA 19 ? ? 110.13 108.30 1.83 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL E 244 ? ? -99.07 -96.53 2 1 LYS E 245 ? ? 178.77 -54.20 3 1 LYS E 246 ? ? -9.68 -62.74 4 1 LYS E 247 ? ? -172.34 -126.98 5 1 LEU E 248 ? ? -68.81 49.90 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 6.92607035312 _pdbx_refine_tls.origin_y -11.1667559612 _pdbx_refine_tls.origin_z 9.08817809415 _pdbx_refine_tls.T[1][1] 0.774477961322 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.196986811055 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.484014956613 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 1.60830357362 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.208322142095 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.705356990164 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 2.06721943522 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -2.09918621641 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -2.50112617427 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.77420470679 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 1.61133923085 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 3.00997293796 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.167212328984 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.53511113513 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.131215435719 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0366915531795 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.123779813668 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.532568925784 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0763993279734 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0180991793949 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.109183889325 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id H _pdbx_refine_tls_group.end_label_seq_id 91 _pdbx_refine_tls_group.end_auth_asym_id F _pdbx_refine_tls_group.end_auth_seq_id 259 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 E GLY 165 ? E GLY 1 2 1 Y 1 E SER 166 ? E SER 2 3 1 Y 1 E LYS 167 ? E LYS 3 4 1 Y 1 E LYS 168 ? E LYS 4 5 1 Y 1 E ARG 259 ? E ARG 95 6 1 Y 1 E GLY 260 ? E GLY 96 7 1 Y 1 E GLY 261 ? E GLY 97 8 1 Y 1 E LEU 262 ? E LEU 98 9 1 Y 1 E ALA 263 ? E ALA 99 10 1 Y 1 E GLU 264 ? E GLU 100 11 1 Y 1 E ARG 265 ? E ARG 101 12 1 Y 1 E ARG 266 ? E ARG 102 13 1 Y 1 E HIS 267 ? E HIS 103 14 1 Y 1 E PRO 268 ? E PRO 104 15 1 Y 1 E PRO 269 ? E PRO 105 16 1 Y 1 E HIS 270 ? E HIS 106 17 1 Y 1 F GLY 165 ? F GLY 1 18 1 Y 1 F SER 166 ? F SER 2 19 1 Y 1 F LYS 167 ? F LYS 3 20 1 Y 1 F LYS 168 ? F LYS 4 21 1 Y 1 F GLY 260 ? F GLY 96 22 1 Y 1 F GLY 261 ? F GLY 97 23 1 Y 1 F LEU 262 ? F LEU 98 24 1 Y 1 F ALA 263 ? F ALA 99 25 1 Y 1 F GLU 264 ? F GLU 100 26 1 Y 1 F ARG 265 ? F ARG 101 27 1 Y 1 F ARG 266 ? F ARG 102 28 1 Y 1 F HIS 267 ? F HIS 103 29 1 Y 1 F PRO 268 ? F PRO 104 30 1 Y 1 F PRO 269 ? F PRO 105 31 1 Y 1 F HIS 270 ? F HIS 106 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 Y5U C1 C N N 517 Y5U C2 C Y N 518 Y5U C3 C Y N 519 Y5U C4 C Y N 520 Y5U C5 C Y N 521 Y5U C6 C Y N 522 Y5U C7 C Y N 523 Y5U C8 C Y N 524 Y5U C9 C Y N 525 Y5U C10 C Y N 526 Y5U C11 C Y N 527 Y5U C12 C Y N 528 Y5U C13 C Y N 529 Y5U C14 C Y N 530 Y5U C15 C Y N 531 Y5U C16 C N N 532 Y5U C17 C Y N 533 Y5U C18 C Y N 534 Y5U C19 C Y N 535 Y5U C20 C Y N 536 Y5U SE1 SE Y N 537 Y5U N1 N N N 538 Y5U N2 N N N 539 Y5U N3 N Y N 540 Y5U N4 N Y N 541 Y5U N5 N N N 542 Y5U N6 N N N 543 Y5U N7 N Y N 544 Y5U N8 N Y N 545 Y5U H4 H N N 546 Y5U H5 H N N 547 Y5U H6 H N N 548 Y5U H7 H N N 549 Y5U H8 H N N 550 Y5U H9 H N N 551 Y5U H13 H N N 552 Y5U H16 H N N 553 Y5U H1 H N N 554 Y5U H2 H N N 555 Y5U H3 H N N 556 Y5U H10 H N N 557 Y5U H12 H N N 558 Y5U H11 H N N 559 Y5U H14 H N N 560 Y5U H15 H N N 561 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TRP N CA sing N N 440 TRP N H sing N N 441 TRP N H2 sing N N 442 TRP CA C sing N N 443 TRP CA CB sing N N 444 TRP CA HA sing N N 445 TRP C O doub N N 446 TRP C OXT sing N N 447 TRP CB CG sing N N 448 TRP CB HB2 sing N N 449 TRP CB HB3 sing N N 450 TRP CG CD1 doub Y N 451 TRP CG CD2 sing Y N 452 TRP CD1 NE1 sing Y N 453 TRP CD1 HD1 sing N N 454 TRP CD2 CE2 doub Y N 455 TRP CD2 CE3 sing Y N 456 TRP NE1 CE2 sing Y N 457 TRP NE1 HE1 sing N N 458 TRP CE2 CZ2 sing Y N 459 TRP CE3 CZ3 doub Y N 460 TRP CE3 HE3 sing N N 461 TRP CZ2 CH2 doub Y N 462 TRP CZ2 HZ2 sing N N 463 TRP CZ3 CH2 sing Y N 464 TRP CZ3 HZ3 sing N N 465 TRP CH2 HH2 sing N N 466 TRP OXT HXT sing N N 467 TYR N CA sing N N 468 TYR N H sing N N 469 TYR N H2 sing N N 470 TYR CA C sing N N 471 TYR CA CB sing N N 472 TYR CA HA sing N N 473 TYR C O doub N N 474 TYR C OXT sing N N 475 TYR CB CG sing N N 476 TYR CB HB2 sing N N 477 TYR CB HB3 sing N N 478 TYR CG CD1 doub Y N 479 TYR CG CD2 sing Y N 480 TYR CD1 CE1 sing Y N 481 TYR CD1 HD1 sing N N 482 TYR CD2 CE2 doub Y N 483 TYR CD2 HD2 sing N N 484 TYR CE1 CZ doub Y N 485 TYR CE1 HE1 sing N N 486 TYR CE2 CZ sing Y N 487 TYR CE2 HE2 sing N N 488 TYR CZ OH sing N N 489 TYR OH HH sing N N 490 TYR OXT HXT sing N N 491 VAL N CA sing N N 492 VAL N H sing N N 493 VAL N H2 sing N N 494 VAL CA C sing N N 495 VAL CA CB sing N N 496 VAL CA HA sing N N 497 VAL C O doub N N 498 VAL C OXT sing N N 499 VAL CB CG1 sing N N 500 VAL CB CG2 sing N N 501 VAL CB HB sing N N 502 VAL CG1 HG11 sing N N 503 VAL CG1 HG12 sing N N 504 VAL CG1 HG13 sing N N 505 VAL CG2 HG21 sing N N 506 VAL CG2 HG22 sing N N 507 VAL CG2 HG23 sing N N 508 VAL OXT HXT sing N N 509 Y5U N2 C1 sing N N 510 Y5U N1 C1 doub N N 511 Y5U C1 C2 sing N N 512 Y5U C2 C3 doub Y N 513 Y5U C2 C20 sing Y N 514 Y5U C3 C4 sing Y N 515 Y5U C20 C19 doub Y N 516 Y5U C4 C5 doub Y N 517 Y5U C19 C5 sing Y N 518 Y5U C19 N8 sing Y N 519 Y5U C5 N3 sing Y N 520 Y5U N8 C6 sing Y N 521 Y5U N3 C6 doub Y N 522 Y5U C6 C7 sing N N 523 Y5U C7 C8 doub Y N 524 Y5U C7 SE1 sing Y N 525 Y5U C8 C9 sing Y N 526 Y5U SE1 C10 sing Y N 527 Y5U C9 C10 doub Y N 528 Y5U C10 C11 sing N N 529 Y5U C11 N4 doub Y N 530 Y5U C11 N7 sing Y N 531 Y5U N4 C12 sing Y N 532 Y5U N7 C18 sing Y N 533 Y5U C12 C18 doub Y N 534 Y5U C12 C13 sing Y N 535 Y5U C18 C17 sing Y N 536 Y5U C13 C14 doub Y N 537 Y5U C17 C15 doub Y N 538 Y5U C14 C15 sing Y N 539 Y5U C15 C16 sing N N 540 Y5U C16 N6 sing N N 541 Y5U C16 N5 doub N N 542 Y5U C3 H4 sing N N 543 Y5U C4 H5 sing N N 544 Y5U C8 H6 sing N N 545 Y5U C9 H7 sing N N 546 Y5U C13 H8 sing N N 547 Y5U C14 H9 sing N N 548 Y5U C17 H13 sing N N 549 Y5U C20 H16 sing N N 550 Y5U N1 H1 sing N N 551 Y5U N2 H2 sing N N 552 Y5U N2 H3 sing N N 553 Y5U N5 H10 sing N N 554 Y5U N6 H12 sing N N 555 Y5U N6 H11 sing N N 556 Y5U N7 H14 sing N N 557 Y5U N8 H15 sing N N 558 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8UFZ 'double helix' 8UFZ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 16 1_555 -0.938 0.192 -0.085 -4.114 -28.939 3.130 1 A_DA2:DT32_B A 2 ? B 32 ? 20 1 1 A DT 3 1_555 B DA 15 1_555 -0.108 -0.190 -0.092 15.835 -24.250 6.487 2 A_DT3:DA31_B A 3 ? B 31 ? 20 1 1 A DA 4 1_555 B DT 14 1_555 -0.118 0.256 0.298 15.933 -26.889 5.014 3 A_DA4:DT30_B A 4 ? B 30 ? 20 1 1 A DA 5 1_555 B DT 13 1_555 0.295 0.178 0.024 1.711 -15.169 11.247 4 A_DA5:DT29_B A 5 ? B 29 ? 20 1 1 A DA 6 1_555 B DT 12 1_555 0.215 0.429 0.242 8.293 -22.092 6.933 5 A_DA6:DT28_B A 6 ? B 28 ? 20 1 1 A DA 7 1_555 B DT 11 1_555 0.545 0.419 0.212 10.310 -30.571 7.854 6 A_DA7:DT27_B A 7 ? B 27 ? ? ? 1 A DG 8 1_555 B DC 10 1_555 1.450 0.734 0.129 3.985 -22.299 17.878 7 A_DG8:DC26_B A 8 ? B 26 ? ? 1 1 A DC 9 1_555 B DG 9 1_555 -0.923 0.231 0.186 -5.475 -8.106 12.716 8 A_DC9:DG25_B A 9 ? B 25 ? 19 1 1 A DG 10 1_555 B DC 8 1_555 -0.284 0.119 0.491 2.480 -0.842 5.665 9 A_DG10:DC24_B A 10 ? B 24 ? 19 1 1 A DG 11 1_555 B DC 7 1_555 -1.151 -0.154 1.078 12.865 -20.239 11.047 10 A_DG11:DC23_B A 11 ? B 23 ? 19 1 1 A DA 12 1_555 B DT 6 1_555 -0.576 -0.378 0.800 11.744 -14.264 5.875 11 A_DA12:DT22_B A 12 ? B 22 ? 20 1 1 A DA 13 1_555 B DT 5 1_555 -0.071 -0.363 0.669 11.218 -25.246 8.444 12 A_DA13:DT21_B A 13 ? B 21 ? 20 1 1 A DG 14 1_555 B DC 4 1_555 -0.228 -0.378 0.502 -10.610 -27.779 2.433 13 A_DG14:DC20_B A 14 ? B 20 ? 19 1 1 A DT 15 1_555 B DA 3 1_555 0.003 0.076 0.900 -9.968 -23.836 12.397 14 A_DT15:DA19_B A 15 ? B 19 ? ? 1 1 A DG 16 1_555 B DC 2 1_555 -0.085 0.045 0.307 7.195 -21.938 11.294 15 A_DG16:DC18_B A 16 ? B 18 ? 19 1 1 C DA 2 1_555 D DT 16 1_555 0.376 0.638 0.006 -8.708 -10.268 1.255 16 C_DA2:DT32_D C 2 ? D 32 ? 20 1 1 C DT 3 1_555 D DA 15 1_555 -0.266 0.041 1.146 -8.947 -11.634 11.713 17 C_DT3:DA31_D C 3 ? D 31 ? 20 1 1 C DA 4 1_555 D DT 14 1_555 -0.401 0.318 -0.027 10.612 -30.895 1.741 18 C_DA4:DT30_D C 4 ? D 30 ? 20 1 1 C DA 5 1_555 D DT 13 1_555 0.102 0.359 0.022 0.602 -23.751 11.653 19 C_DA5:DT29_D C 5 ? D 29 ? ? 1 1 C DA 6 1_555 D DT 12 1_555 0.404 0.201 0.686 10.173 -20.073 1.545 20 C_DA6:DT28_D C 6 ? D 28 ? 20 1 1 C DA 7 1_555 D DT 11 1_555 0.251 -0.023 0.586 14.449 -31.565 5.301 21 C_DA7:DT27_D C 7 ? D 27 ? 20 1 1 C DG 8 1_555 D DC 10 1_555 1.273 0.483 0.757 10.082 -25.743 14.769 22 C_DG8:DC26_D C 8 ? D 26 ? ? 1 1 C DC 9 1_555 D DG 9 1_555 -1.003 0.372 0.835 -2.654 -14.311 10.942 23 C_DC9:DG25_D C 9 ? D 25 ? ? 1 1 C DG 10 1_555 D DC 8 1_555 1.051 0.110 0.274 3.228 3.681 -5.058 24 C_DG10:DC24_D C 10 ? D 24 ? 19 1 1 C DG 11 1_555 D DC 7 1_555 -0.595 -0.211 0.646 9.819 -11.060 3.140 25 C_DG11:DC23_D C 11 ? D 23 ? 19 1 1 C DA 12 1_555 D DT 6 1_555 -0.039 -0.285 0.898 8.614 -13.447 5.527 26 C_DA12:DT22_D C 12 ? D 22 ? 20 1 1 C DA 13 1_555 D DT 5 1_555 -0.299 -0.223 0.692 10.019 -31.306 8.587 27 C_DA13:DT21_D C 13 ? D 21 ? 20 1 1 C DG 14 1_555 D DC 4 1_555 -0.129 -0.178 1.087 -9.356 -29.889 4.248 28 C_DG14:DC20_D C 14 ? D 20 ? 19 1 1 C DT 15 1_555 D DA 3 1_555 -0.276 -0.089 0.640 -6.171 -17.414 6.821 29 C_DT15:DA19_D C 15 ? D 19 ? 20 1 1 C DG 16 1_555 D DC 2 1_555 0.242 0.395 0.591 11.343 -18.423 16.410 30 C_DG16:DC18_D C 16 ? D 18 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 16 1_555 A DT 3 1_555 B DA 15 1_555 0.422 -0.524 2.620 0.783 4.849 33.089 -1.544 -0.631 2.529 8.456 -1.366 33.442 1 AA_DA2DT3:DA31DT32_BB A 2 ? B 32 ? A 3 ? B 31 ? 1 A DT 3 1_555 B DA 15 1_555 A DA 4 1_555 B DT 14 1_555 -0.198 0.994 3.528 0.952 1.034 40.681 1.306 0.398 3.546 1.487 -1.369 40.705 2 AA_DT3DA4:DT30DA31_BB A 3 ? B 31 ? A 4 ? B 30 ? 1 A DA 4 1_555 B DT 14 1_555 A DA 5 1_555 B DT 13 1_555 0.477 -0.089 3.734 2.538 0.646 34.281 -0.267 -0.353 3.756 1.095 -4.298 34.378 3 AA_DA4DA5:DT29DT30_BB A 4 ? B 30 ? A 5 ? B 29 ? 1 A DA 5 1_555 B DT 13 1_555 A DA 6 1_555 B DT 12 1_555 0.267 -0.236 2.982 -1.415 3.786 38.028 -0.793 -0.568 2.934 5.791 2.163 38.235 4 AA_DA5DA6:DT28DT29_BB A 5 ? B 29 ? A 6 ? B 28 ? 1 A DA 6 1_555 B DT 12 1_555 A DA 7 1_555 B DT 11 1_555 -0.020 -0.428 3.188 3.258 -4.210 35.131 -0.097 0.501 3.202 -6.926 -5.359 35.520 5 AA_DA6DA7:DT27DT28_BB A 6 ? B 28 ? A 7 ? B 27 ? 1 A DA 7 1_555 B DT 11 1_555 A DG 8 1_555 B DC 10 1_555 0.823 -0.361 3.460 2.044 -2.084 36.717 -0.269 -1.006 3.514 -3.301 -3.239 36.828 6 AA_DA7DG8:DC26DT27_BB A 7 ? B 27 ? A 8 ? B 26 ? 1 A DG 8 1_555 B DC 10 1_555 A DC 9 1_555 B DG 9 1_555 -0.174 -1.490 3.273 -2.611 4.835 19.242 -6.428 -0.654 2.815 14.095 7.612 20.004 7 AA_DG8DC9:DG25DC26_BB A 8 ? B 26 ? A 9 ? B 25 ? 1 A DC 9 1_555 B DG 9 1_555 A DG 10 1_555 B DC 8 1_555 -0.038 -0.251 3.200 -0.589 9.947 31.528 -2.074 -0.030 2.986 17.760 1.052 33.027 8 AA_DC9DG10:DC24DG25_BB A 9 ? B 25 ? A 10 ? B 24 ? 1 A DG 10 1_555 B DC 8 1_555 A DG 11 1_555 B DC 7 1_555 -0.654 0.007 3.081 -5.303 -0.179 29.760 0.048 0.221 3.148 -0.346 10.224 30.219 9 AA_DG10DG11:DC23DC24_BB A 10 ? B 24 ? A 11 ? B 23 ? 1 A DG 11 1_555 B DC 7 1_555 A DA 12 1_555 B DT 6 1_555 -0.240 -0.404 3.254 -2.648 4.222 34.592 -1.305 0.003 3.193 7.054 4.424 34.938 10 AA_DG11DA12:DT22DC23_BB A 11 ? B 23 ? A 12 ? B 22 ? 1 A DA 12 1_555 B DT 6 1_555 A DA 13 1_555 B DT 5 1_555 -0.187 -0.055 3.177 0.990 3.165 37.882 -0.474 0.409 3.157 4.863 -1.521 38.022 11 AA_DA12DA13:DT21DT22_BB A 12 ? B 22 ? A 13 ? B 21 ? 1 A DA 13 1_555 B DT 5 1_555 A DG 14 1_555 B DC 4 1_555 -0.082 -0.882 3.767 -1.356 0.780 38.379 -1.452 -0.070 3.750 1.186 2.061 38.409 12 AA_DA13DG14:DC20DT21_BB A 13 ? B 21 ? A 14 ? B 20 ? 1 A DG 14 1_555 B DC 4 1_555 A DT 15 1_555 B DA 3 1_555 -0.654 -0.707 3.251 -3.202 -4.514 27.143 -0.359 0.573 3.375 -9.493 6.734 27.691 13 AA_DG14DT15:DA19DC20_BB A 14 ? B 20 ? A 15 ? B 19 ? 1 A DT 15 1_555 B DA 3 1_555 A DG 16 1_555 B DC 2 1_555 -0.432 1.065 2.886 1.459 9.029 35.695 0.557 0.867 3.038 14.439 -2.334 36.811 14 AA_DT15DG16:DC18DA19_BB A 15 ? B 19 ? A 16 ? B 18 ? 1 C DA 2 1_555 D DT 16 1_555 C DT 3 1_555 D DA 15 1_555 0.610 -1.202 3.177 -7.022 6.806 27.257 -3.774 -2.633 2.575 13.886 14.328 28.927 15 CC_DA2DT3:DA31DT32_DD C 2 ? D 32 ? C 3 ? D 31 ? 1 C DT 3 1_555 D DA 15 1_555 C DA 4 1_555 D DT 14 1_555 -1.045 0.642 2.805 8.402 -8.054 37.973 1.705 2.333 2.352 -12.036 -12.556 39.653 16 CC_DT3DA4:DT30DA31_DD C 3 ? D 31 ? C 4 ? D 30 ? 1 C DA 4 1_555 D DT 14 1_555 C DA 5 1_555 D DT 13 1_555 0.521 -0.204 3.305 1.317 -1.220 35.303 -0.153 -0.662 3.326 -2.010 -2.170 35.347 17 CC_DA4DA5:DT29DT30_DD C 4 ? D 30 ? C 5 ? D 29 ? 1 C DA 5 1_555 D DT 13 1_555 C DA 6 1_555 D DT 12 1_555 0.094 -0.124 2.899 -5.523 0.134 39.499 -0.196 -0.702 2.860 0.197 8.123 39.868 18 CC_DA5DA6:DT28DT29_DD C 5 ? D 29 ? C 6 ? D 28 ? 1 C DA 6 1_555 D DT 12 1_555 C DA 7 1_555 D DT 11 1_555 0.347 -0.518 3.129 4.472 -5.282 34.588 -0.090 0.074 3.190 -8.776 -7.429 35.253 19 CC_DA6DA7:DT27DT28_DD C 6 ? D 28 ? C 7 ? D 27 ? 1 C DA 7 1_555 D DT 11 1_555 C DG 8 1_555 D DC 10 1_555 0.828 -0.301 3.516 2.485 -3.827 38.514 0.056 -0.917 3.573 -5.777 -3.751 38.774 20 CC_DA7DG8:DC26DT27_DD C 7 ? D 27 ? C 8 ? D 26 ? 1 C DG 8 1_555 D DC 10 1_555 C DC 9 1_555 D DG 9 1_555 -0.060 -1.345 3.336 -2.074 5.972 20.552 -5.927 -0.646 2.827 16.248 5.644 21.493 21 CC_DG8DC9:DG25DC26_DD C 8 ? D 26 ? C 9 ? D 25 ? 1 C DC 9 1_555 D DG 9 1_555 C DG 10 1_555 D DC 8 1_555 -0.520 -0.146 3.293 2.679 9.708 35.922 -1.512 1.168 3.105 15.372 -4.242 37.262 22 CC_DC9DG10:DC24DG25_DD C 9 ? D 25 ? C 10 ? D 24 ? 1 C DG 10 1_555 D DC 8 1_555 C DG 11 1_555 D DC 7 1_555 -0.486 -0.187 3.207 -5.821 2.556 26.133 -1.056 -0.442 3.205 5.549 12.638 26.882 23 CC_DG10DG11:DC23DC24_DD C 10 ? D 24 ? C 11 ? D 23 ? 1 C DG 11 1_555 D DC 7 1_555 C DA 12 1_555 D DT 6 1_555 0.080 -0.588 3.317 -3.139 6.186 33.568 -1.969 -0.628 3.142 10.571 5.364 34.257 24 CC_DG11DA12:DT22DC23_DD C 11 ? D 23 ? C 12 ? D 22 ? 1 C DA 12 1_555 D DT 6 1_555 C DA 13 1_555 D DT 5 1_555 -0.301 -0.277 3.081 2.893 3.202 34.432 -0.924 0.918 3.009 5.383 -4.863 34.693 25 CC_DA12DA13:DT21DT22_DD C 12 ? D 22 ? C 13 ? D 21 ? 1 C DA 13 1_555 D DT 5 1_555 C DG 14 1_555 D DC 4 1_555 0.012 -0.869 3.561 -6.972 1.379 38.588 -1.474 -0.921 3.475 2.066 10.443 39.212 26 CC_DA13DG14:DC20DT21_DD C 13 ? D 21 ? C 14 ? D 20 ? 1 C DG 14 1_555 D DC 4 1_555 C DT 15 1_555 D DA 3 1_555 -1.084 -1.036 3.283 -2.205 -5.949 24.040 -0.513 1.818 3.517 -13.974 5.178 24.851 27 CC_DG14DT15:DA19DC20_DD C 14 ? D 20 ? C 15 ? D 19 ? 1 C DT 15 1_555 D DA 3 1_555 C DG 16 1_555 D DC 2 1_555 0.183 1.069 3.015 1.225 12.970 34.800 -0.027 -0.127 3.203 20.805 -1.964 37.088 28 CC_DT15DG16:DC18DA19_DD C 15 ? D 19 ? C 16 ? D 18 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' 'United States' HL155178 1 'National Science Foundation (NSF, United States)' 'United States' MCB2028902 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM137160 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM111749 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8EK8 _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8UFZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.018059 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007979 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013433 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018818 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.99627 ? ? ? 14.84254 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? SE ? ? 33.79294 ? ? ? 6.51140 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_