data_8UTG # _entry.id 8UTG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8UTG pdb_00008utg 10.2210/pdb8utg/pdb WWPDB D_1000278494 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8UTG _pdbx_database_status.recvd_initial_deposition_date 2023-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 mbrinton@gsu.edu Margo Brinton A 'principal investigator/group leader' 0000-0003-4868-175X 4 mwg@gsu.edu Markus Germann W 'principal investigator/group leader' 0000-0002-1674-8166 5 wdw@gsu.edu W Wilson D 'principal investigator/group leader' 0000-0001-5225-5089 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Terrell, J.R.' 1 0000-0001-5394-5663 'Le, T.T.' 2 0009-0001-4138-2565 'Wilson, W.D.' 3 0000-0001-5225-5089 'Siemer, J.L.' 4 0000-0002-1258-4811 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of an RNA G-Quadruplex from the West Nile Virus Genome' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terrell, J.R.' 1 0000-0001-5394-5663 primary 'Le, T.T.' 2 0009-0001-4138-2565 primary 'Paul, A.' 3 0000-0003-4592-3442 primary 'Poon, G.M.K.' 4 0000-0001-5107-9458 primary 'Brinton, M.A.' 5 0000-0003-4868-175X primary 'Germann, M.W.' 6 0000-0002-1674-8166 primary 'Wilson, W.D.' 7 0000-0001-5225-5089 primary 'Siemer, J.L.' 8 0000-0002-1258-4811 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*UP*AP*UP*GP*GP*AP*AP*GP*AP*GP*GP*CP*GP*GP*UP*UP*GP*GP*UP*AP*U)-3') ; 6850.101 2 ? ? ? ? 2 non-polymer syn 'AMMONIUM ION' 18.038 3 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 4 water nat water 18.015 22 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code UAUGGAAGAGGCGGUUGGUAU _entity_poly.pdbx_seq_one_letter_code_can UAUGGAAGAGGCGGUUGGUAU _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'AMMONIUM ION' NH4 3 'POTASSIUM ION' K 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 A n 1 3 U n 1 4 G n 1 5 G n 1 6 A n 1 7 A n 1 8 G n 1 9 A n 1 10 G n 1 11 G n 1 12 C n 1 13 G n 1 14 G n 1 15 U n 1 16 U n 1 17 G n 1 18 G n 1 19 U n 1 20 A n 1 21 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'West Nile virus strain NY-99' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1968826 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U A . n A 1 2 A 2 2 2 A A A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 A 7 7 7 A A A . n A 1 8 G 8 8 8 G G A . n A 1 9 A 9 9 9 A A A . n A 1 10 G 10 10 10 G G A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 U 15 15 15 U U A . n A 1 16 U 16 16 16 U U A . n A 1 17 G 17 17 17 G G A . n A 1 18 G 18 18 18 G G A . n A 1 19 U 19 19 19 U U A . n A 1 20 A 20 20 20 A A A . n A 1 21 U 21 21 21 U U A . n B 1 1 U 1 1 1 U U B . n B 1 2 A 2 2 2 A A B . n B 1 3 U 3 3 3 U U B . n B 1 4 G 4 4 4 G G B . n B 1 5 G 5 5 5 G G B . n B 1 6 A 6 6 6 A A B . n B 1 7 A 7 7 7 A A B . n B 1 8 G 8 8 8 G G B . n B 1 9 A 9 9 9 A A B . n B 1 10 G 10 10 10 G G B . n B 1 11 G 11 11 11 G G B . n B 1 12 C 12 12 12 C C B . n B 1 13 G 13 13 13 G G B . n B 1 14 G 14 14 14 G G B . n B 1 15 U 15 15 15 U U B . n B 1 16 U 16 16 16 U U B . n B 1 17 G 17 17 17 G G B . n B 1 18 G 18 18 18 G G B . n B 1 19 U 19 19 19 U U B . n B 1 20 A 20 20 20 A A B . n B 1 21 U 21 21 21 U U B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NH4 1 101 1 NH4 NH4 A . D 3 K 1 102 2 K K A . E 2 NH4 1 103 3 NH4 NH4 A . F 3 K 1 101 4 K K B . G 2 NH4 1 102 5 NH4 NH4 B . H 4 HOH 1 201 11 HOH HOH A . H 4 HOH 2 202 4 HOH HOH A . H 4 HOH 3 203 17 HOH HOH A . H 4 HOH 4 204 16 HOH HOH A . H 4 HOH 5 205 25 HOH HOH A . H 4 HOH 6 206 26 HOH HOH A . I 4 HOH 1 201 7 HOH HOH B . I 4 HOH 2 202 10 HOH HOH B . I 4 HOH 3 203 2 HOH HOH B . I 4 HOH 4 204 19 HOH HOH B . I 4 HOH 5 205 24 HOH HOH B . I 4 HOH 6 206 8 HOH HOH B . I 4 HOH 7 207 5 HOH HOH B . I 4 HOH 8 208 9 HOH HOH B . I 4 HOH 9 209 1 HOH HOH B . I 4 HOH 10 210 3 HOH HOH B . I 4 HOH 11 211 15 HOH HOH B . I 4 HOH 12 212 21 HOH HOH B . I 4 HOH 13 213 6 HOH HOH B . I 4 HOH 14 214 13 HOH HOH B . I 4 HOH 15 215 18 HOH HOH B . I 4 HOH 16 216 22 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8UTG _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.805 _cell.length_a_esd ? _cell.length_b 33.805 _cell.length_b_esd ? _cell.length_c 163.376 _cell.length_c_esd ? _cell.volume 161688.154 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8UTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ;P 32 2" ; _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8UTG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Sitting-drop tray prepared 1:1 using an Art Robbins Crystal Gryphon. Molecular Dimensions Helix HT condition F4 (50mM KCl, 50mM Bis-Tris pH=7.0, 1.1M ammonium sulfate) yielded loopable crystals after 6 weeks. Crystals were directly flash frozen without cryoprotection ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-09-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Horizontal double crystal monochromator (DCM)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.920100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.920100 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-2 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 41.25 _reflns.entry_id 8UTG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.97 _reflns.d_resolution_low 29.28 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8368 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.148 _reflns.pdbx_Rpim_I_all 0.039 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.14 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.02 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 567 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 14.8 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.397 _reflns_shell.pdbx_Rpim_I_all 0.85 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.831 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.286 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 47.08 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8UTG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.97 _refine.ls_d_res_low 29.28 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8285 _refine.ls_number_reflns_R_free 835 _refine.ls_number_reflns_R_work 7450 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.56 _refine.ls_percent_reflns_R_free 10.08 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1987 _refine.ls_R_factor_R_free 0.2426 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1937 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.7178 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2867 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.97 _refine_hist.d_res_low 29.28 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 935 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 908 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0149 ? 1018 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.8774 ? 1588 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0889 ? 208 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0223 ? 42 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 20.0557 ? 496 ? f_dihedral_angle_d ? ? # _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id d_2 _refine_ls_restr_ncs.pdbx_ens_id ens_1 _refine_ls_restr_ncs.rms_dev_position 1.12272322381 _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type 'Torsion NCS' _refine_ls_restr_ncs.pdbx_asym_id A _refine_ls_restr_ncs.pdbx_auth_asym_id A _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? _refine_ls_restr_ncs.ncs_model_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.97 2.09 . . 135 1208 99.33 . . . . 0.2720 . . . . . . . . . . . 0.3197 'X-RAY DIFFRACTION' 2.09 2.25 . . 136 1205 99.33 . . . . 0.2091 . . . . . . . . . . . 0.3060 'X-RAY DIFFRACTION' 2.26 2.48 . . 138 1201 99.85 . . . . 0.2869 . . . . . . . . . . . 0.2856 'X-RAY DIFFRACTION' 2.48 2.84 . . 132 1230 99.85 . . . . 0.2474 . . . . . . . . . . . 0.3378 'X-RAY DIFFRACTION' 2.84 3.58 . . 143 1244 99.00 . . . . 0.1971 . . . . . . . . . . . 0.2241 'X-RAY DIFFRACTION' 3.58 29.28 . . 151 1362 99.93 . . . . 0.1511 . . . . . . . . . . . 0.2057 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.matrix[1][1] 0.971509729087 _struct_ncs_oper.matrix[1][2] -0.0247860338485 _struct_ncs_oper.matrix[1][3] 0.2357000187 _struct_ncs_oper.matrix[2][1] -0.0253816548387 _struct_ncs_oper.matrix[2][2] -0.999677705292 _struct_ncs_oper.matrix[2][3] -0.000507088737204 _struct_ncs_oper.matrix[3][1] 0.23563662255 _struct_ncs_oper.matrix[3][2] -0.00548981487841 _struct_ncs_oper.matrix[3][3] -0.971825727199 _struct_ncs_oper.vector[1] 2.58901536556 _struct_ncs_oper.vector[2] -5.83114676972 _struct_ncs_oper.vector[3] -23.0204857678 _struct_ncs_oper.details ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "A" ; ens_1 d_2 ;chain "B" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 A U 1 . A U 1 . A U 1 A U 1 ? ? ens_1 d_2 1 B U 1 . B U 1 . B U 1 B U 1 ? ? # _struct_ncs_ens.id ens_1 _struct_ncs_ens.details ? # _struct_ncs_ens_gen.ens_id ens_1 _struct_ncs_ens_gen.dom_id_1 d_2 _struct_ncs_ens_gen.dom_id_2 d_1 _struct_ncs_ens_gen.oper_id 1 # _struct.entry_id 8UTG _struct.title 'An RNA G-Quadruplex from the NS5 gene in the West Nile Virus Genome' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8UTG _struct_keywords.text 'RNA Quadruplex, G-Quadruplex, G-tetrad, West Nile Virus, Orthoflavivirus, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8UTG _struct_ref.pdbx_db_accession 8UTG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8UTG A 1 ? 21 ? 8UTG 1 ? 21 ? 1 21 2 1 8UTG B 1 ? 21 ? 8UTG 1 ? 21 ? 1 21 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'mass spectrometry' ? 2 1 'native gel electrophoresis' ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 4 O6 ? ? ? 1_555 D K . K ? ? A G 4 A K 102 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc2 metalc ? ? A G 5 O6 ? ? ? 1_555 D K . K ? ? A G 5 A K 102 1_555 ? ? ? ? ? ? ? 2.770 ? ? metalc3 metalc ? ? A G 10 O6 ? ? ? 1_555 D K . K ? ? A G 10 A K 102 1_555 ? ? ? ? ? ? ? 2.851 ? ? metalc4 metalc ? ? A G 11 O6 ? ? ? 1_555 D K . K ? ? A G 11 A K 102 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc5 metalc ? ? A G 13 O6 ? ? ? 1_555 D K . K ? ? A G 13 A K 102 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc6 metalc ? ? A G 14 O6 ? ? ? 1_555 D K . K ? ? A G 14 A K 102 1_555 ? ? ? ? ? ? ? 2.773 ? ? metalc7 metalc ? ? A G 17 O6 ? ? ? 1_555 D K . K ? ? A G 17 A K 102 1_555 ? ? ? ? ? ? ? 2.873 ? ? metalc8 metalc ? ? A G 18 O6 ? ? ? 1_555 D K . K ? ? A G 18 A K 102 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc9 metalc ? ? B G 4 O6 ? ? ? 1_555 F K . K ? ? B G 4 B K 101 1_555 ? ? ? ? ? ? ? 2.764 ? ? metalc10 metalc ? ? B G 5 O6 ? ? ? 1_555 F K . K ? ? B G 5 B K 101 1_555 ? ? ? ? ? ? ? 2.778 ? ? metalc11 metalc ? ? B G 10 O6 ? ? ? 1_555 F K . K ? ? B G 10 B K 101 1_555 ? ? ? ? ? ? ? 2.617 ? ? metalc12 metalc ? ? B G 11 O6 ? ? ? 1_555 F K . K ? ? B G 11 B K 101 1_555 ? ? ? ? ? ? ? 2.813 ? ? metalc13 metalc ? ? B G 13 O6 ? ? ? 1_555 F K . K ? ? B G 13 B K 101 1_555 ? ? ? ? ? ? ? 2.821 ? ? metalc14 metalc ? ? B G 14 O6 ? ? ? 1_555 F K . K ? ? B G 14 B K 101 1_555 ? ? ? ? ? ? ? 2.726 ? ? metalc15 metalc ? ? B G 17 O6 ? ? ? 1_555 F K . K ? ? B G 17 B K 101 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc16 metalc ? ? B G 18 O6 ? ? ? 1_555 F K . K ? ? B G 18 B K 101 1_555 ? ? ? ? ? ? ? 2.781 ? ? hydrog1 hydrog ? ? A G 4 N2 ? ? ? 1_555 A A 9 N7 ? ? A G 4 A A 9 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog2 hydrog ? ? A G 4 N1 ? ? ? 1_555 A G 10 O6 ? ? A G 4 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A G 4 N2 ? ? ? 1_555 A G 10 N7 ? ? A G 4 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A G 4 N7 ? ? ? 1_555 A G 17 N2 ? ? A G 4 A G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A G 4 O6 ? ? ? 1_555 A G 17 N1 ? ? A G 4 A G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A G 5 N1 ? ? ? 1_555 A G 11 O6 ? ? A G 5 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 11 N7 ? ? A G 5 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A G 5 N7 ? ? ? 1_555 A G 18 N2 ? ? A G 5 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A G 5 O6 ? ? ? 1_555 A G 18 N1 ? ? A G 5 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A A 6 N1 ? ? ? 1_555 A A 20 N6 ? ? A A 6 A A 20 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog11 hydrog ? ? A A 6 N6 ? ? ? 1_555 A A 20 N7 ? ? A A 6 A A 20 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog12 hydrog ? ? A G 8 N1 ? ? ? 1_555 A U 19 O2 ? ? A G 8 A U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A G 8 O6 ? ? ? 1_555 A U 19 N3 ? ? A G 8 A U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A G 10 N3 ? ? ? 1_555 A C 12 N4 ? ? A G 10 A C 12 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog15 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 13 O6 ? ? A G 10 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 13 N7 ? ? A G 10 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 11 N1 ? ? ? 1_555 A G 14 O6 ? ? A G 11 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 11 N2 ? ? ? 1_555 A G 14 N7 ? ? A G 11 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 13 N1 ? ? ? 1_555 A G 17 O6 ? ? A G 13 A G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 13 N2 ? ? ? 1_555 A G 17 N7 ? ? A G 13 A G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A G 14 N1 ? ? ? 1_555 A G 18 O6 ? ? A G 14 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 14 N2 ? ? ? 1_555 A G 18 N7 ? ? A G 14 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A U 15 N3 ? ? ? 1_555 A U 19 O4 ? ? A U 15 A U 19 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog24 hydrog ? ? B G 4 N2 ? ? ? 1_555 B A 9 N7 ? ? B G 4 B A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog25 hydrog ? ? B G 4 N3 ? ? ? 1_555 B A 9 N6 ? ? B G 4 B A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog26 hydrog ? ? B G 4 N1 ? ? ? 1_555 B G 10 O6 ? ? B G 4 B G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B G 4 N2 ? ? ? 1_555 B G 10 N7 ? ? B G 4 B G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B G 4 N7 ? ? ? 1_555 B G 17 N2 ? ? B G 4 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B G 4 O6 ? ? ? 1_555 B G 17 N1 ? ? B G 4 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? B G 5 N1 ? ? ? 1_555 B G 11 O6 ? ? B G 5 B G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B G 5 N2 ? ? ? 1_555 B G 11 N7 ? ? B G 5 B G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B G 5 N7 ? ? ? 1_555 B G 18 N2 ? ? B G 5 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B G 5 O6 ? ? ? 1_555 B G 18 N1 ? ? B G 5 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B A 6 N1 ? ? ? 1_555 B A 20 N6 ? ? B A 6 B A 20 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog35 hydrog ? ? B A 6 N6 ? ? ? 1_555 B A 20 N7 ? ? B A 6 B A 20 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog36 hydrog ? ? B G 8 N1 ? ? ? 1_555 B U 19 O2 ? ? B G 8 B U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? B G 8 O6 ? ? ? 1_555 B U 19 N3 ? ? B G 8 B U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? B G 10 N1 ? ? ? 1_555 B G 13 O6 ? ? B G 10 B G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? B G 10 N2 ? ? ? 1_555 B G 13 N7 ? ? B G 10 B G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? B G 11 N1 ? ? ? 1_555 B G 14 O6 ? ? B G 11 B G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? B G 11 N2 ? ? ? 1_555 B G 14 N7 ? ? B G 11 B G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? B G 13 N1 ? ? ? 1_555 B G 17 O6 ? ? B G 13 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? B G 13 N2 ? ? ? 1_555 B G 17 N7 ? ? B G 13 B G 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? B G 14 N1 ? ? ? 1_555 B G 18 O6 ? ? B G 14 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog45 hydrog ? ? B G 14 N2 ? ? ? 1_555 B G 18 N7 ? ? B G 14 B G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog46 hydrog ? ? B U 15 N3 ? ? ? 1_555 B U 19 O4 ? ? B U 15 B U 19 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 5 ? A G 5 ? 1_555 78.2 ? 2 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 69.3 ? 3 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 91.7 ? 4 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 139.3 ? 5 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 73.1 ? 6 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 83.2 ? 7 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 106.7 ? 8 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 155.2 ? 9 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 68.5 ? 10 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 89.2 ? 11 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 149.5 ? 12 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 109.8 ? 13 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 137.2 ? 14 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 69.3 ? 15 O6 ? A G 13 ? A G 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 78.6 ? 16 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 70.5 ? 17 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 133.8 ? 18 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 107.2 ? 19 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 148.8 ? 20 O6 ? A G 13 ? A G 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 68.8 ? 21 O6 ? A G 14 ? A G 14 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 17 ? A G 17 ? 1_555 84.4 ? 22 O6 ? A G 4 ? A G 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 88.1 ? 23 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 68.5 ? 24 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 153.0 ? 25 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 107.0 ? 26 O6 ? A G 13 ? A G 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 134.9 ? 27 O6 ? A G 14 ? A G 14 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 69.1 ? 28 O6 ? A G 17 ? A G 17 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A G 18 ? A G 18 ? 1_555 77.2 ? 29 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 5 ? B G 5 ? 1_555 79.6 ? 30 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 10 ? B G 10 ? 1_555 71.9 ? 31 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 10 ? B G 10 ? 1_555 91.3 ? 32 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 11 ? B G 11 ? 1_555 139.1 ? 33 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 11 ? B G 11 ? 1_555 72.6 ? 34 O6 ? B G 10 ? B G 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 11 ? B G 11 ? 1_555 79.3 ? 35 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 13 ? B G 13 ? 1_555 107.5 ? 36 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 13 ? B G 13 ? 1_555 153.1 ? 37 O6 ? B G 10 ? B G 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 13 ? B G 13 ? 1_555 67.5 ? 38 O6 ? B G 11 ? B G 11 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 13 ? B G 13 ? 1_555 86.7 ? 39 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 14 ? B G 14 ? 1_555 151.4 ? 40 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 14 ? B G 14 ? 1_555 107.8 ? 41 O6 ? B G 10 ? B G 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 14 ? B G 14 ? 1_555 133.8 ? 42 O6 ? B G 11 ? B G 11 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 14 ? B G 14 ? 1_555 67.7 ? 43 O6 ? B G 13 ? B G 13 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 14 ? B G 14 ? 1_555 78.8 ? 44 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 69.6 ? 45 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 135.7 ? 46 O6 ? B G 10 ? B G 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 107.6 ? 47 O6 ? B G 11 ? B G 11 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 148.9 ? 48 O6 ? B G 13 ? B G 13 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 69.2 ? 49 O6 ? B G 14 ? B G 14 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 17 ? B G 17 ? 1_555 87.8 ? 50 O6 ? B G 4 ? B G 4 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 88.5 ? 51 O6 ? B G 5 ? B G 5 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 70.7 ? 52 O6 ? B G 10 ? B G 10 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 155.7 ? 53 O6 ? B G 11 ? B G 11 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 109.1 ? 54 O6 ? B G 13 ? B G 13 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 134.1 ? 55 O6 ? B G 14 ? B G 14 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 69.1 ? 56 O6 ? B G 17 ? B G 17 ? 1_555 K ? F K . ? B K 101 ? 1_555 O6 ? B G 18 ? B G 18 ? 1_555 77.4 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N7 A G 18 ? ? C8 A G 18 ? ? 1.348 1.305 0.043 0.006 N 2 1 C6 B G 10 ? ? N1 B G 10 ? ? 1.346 1.391 -0.045 0.007 N 3 1 N7 B G 10 ? ? C8 B G 10 ? ? 1.344 1.305 0.039 0.006 N 4 1 N3 B G 11 ? ? C4 B G 11 ? ? 1.307 1.350 -0.043 0.007 N 5 1 N7 B G 13 ? ? C8 B G 13 ? ? 1.349 1.305 0.044 0.006 N 6 1 C2 B G 18 ? ? N3 B G 18 ? ? 1.268 1.323 -0.055 0.008 N 7 1 C2 B U 19 ? ? N3 B U 19 ? ? 1.324 1.373 -0.049 0.007 N 8 1 C5 B A 20 ? ? N7 B A 20 ? ? 1.439 1.388 0.051 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 A G 5 ? ? C4 A G 5 ? ? C5 A G 5 ? ? 107.95 105.40 2.55 0.40 N 2 1 N9 A A 6 ? ? C4 A A 6 ? ? C5 A A 6 ? ? 103.27 105.80 -2.53 0.40 N 3 1 "O4'" A G 10 ? ? "C1'" A G 10 ? ? N9 A G 10 ? ? 113.76 108.50 5.26 0.70 N 4 1 C2 A G 10 ? ? N3 A G 10 ? ? C4 A G 10 ? ? 108.74 111.90 -3.16 0.50 N 5 1 C5 A G 10 ? ? C6 A G 10 ? ? N1 A G 10 ? ? 107.84 111.50 -3.66 0.50 N 6 1 N1 A C 12 ? ? C2 A C 12 ? ? O2 A C 12 ? ? 122.68 118.90 3.78 0.60 N 7 1 C4 A G 14 ? ? C5 A G 14 ? ? N7 A G 14 ? ? 114.02 110.80 3.22 0.40 N 8 1 C6 A G 14 ? ? C5 A G 14 ? ? N7 A G 14 ? ? 126.41 130.40 -3.99 0.60 N 9 1 N1 A G 14 ? ? C6 A G 14 ? ? O6 A G 14 ? ? 125.65 119.90 5.75 0.60 N 10 1 C5 A G 14 ? ? C6 A G 14 ? ? O6 A G 14 ? ? 123.00 128.60 -5.60 0.60 N 11 1 "O4'" A U 16 ? ? "C1'" A U 16 ? ? N1 A U 16 ? ? 113.11 108.50 4.61 0.70 N 12 1 "O3'" A G 17 ? ? P A G 18 ? ? OP1 A G 18 ? ? 119.96 110.50 9.46 1.10 Y 13 1 C5 B G 4 ? ? N7 B G 4 ? ? C8 B G 4 ? ? 101.03 104.30 -3.27 0.50 N 14 1 N7 B G 4 ? ? C8 B G 4 ? ? N9 B G 4 ? ? 117.76 113.10 4.66 0.50 N 15 1 C8 B G 4 ? ? N9 B G 4 ? ? C4 B G 4 ? ? 101.85 106.40 -4.55 0.40 N 16 1 "O3'" B G 4 ? ? P B G 5 ? ? OP2 B G 5 ? ? 118.70 110.50 8.20 1.10 Y 17 1 N1 B A 9 ? ? C6 B A 9 ? ? N6 B A 9 ? ? 123.61 118.60 5.01 0.60 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+2/3 3 -x+y,-x,z+1/3 4 x-y,-y,-z+1/3 5 -x,-x+y,-z+2/3 6 y,x,-z # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -14.0899780457 _pdbx_refine_tls.origin_y -2.73395615904 _pdbx_refine_tls.origin_z -13.195263151 _pdbx_refine_tls.T[1][1] 0.231130571944 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0511127752448 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.00114318782027 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.212141126461 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0233739124629 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.330229233167 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.02636150006 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.34372271488 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -1.27786046885 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.44926737682 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.480283526773 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 6.49243527035 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0235758115069 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.210337475713 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0703362067196 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.260594213232 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0214087386391 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0313088932687 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0392337612711 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.200641100158 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.00258182373177 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id S _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id H _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id C _pdbx_refine_tls_group.end_auth_seq_id 5 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_entry_details.entry_id 8UTG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 K K K N N 114 NH4 N N N N 115 NH4 HN1 H N N 116 NH4 HN2 H N N 117 NH4 HN3 H N N 118 NH4 HN4 H N N 119 U OP3 O N N 120 U P P N N 121 U OP1 O N N 122 U OP2 O N N 123 U "O5'" O N N 124 U "C5'" C N N 125 U "C4'" C N R 126 U "O4'" O N N 127 U "C3'" C N S 128 U "O3'" O N N 129 U "C2'" C N R 130 U "O2'" O N N 131 U "C1'" C N R 132 U N1 N N N 133 U C2 C N N 134 U O2 O N N 135 U N3 N N N 136 U C4 C N N 137 U O4 O N N 138 U C5 C N N 139 U C6 C N N 140 U HOP3 H N N 141 U HOP2 H N N 142 U "H5'" H N N 143 U "H5''" H N N 144 U "H4'" H N N 145 U "H3'" H N N 146 U "HO3'" H N N 147 U "H2'" H N N 148 U "HO2'" H N N 149 U "H1'" H N N 150 U H3 H N N 151 U H5 H N N 152 U H6 H N N 153 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 NH4 N HN1 sing N N 118 NH4 N HN2 sing N N 119 NH4 N HN3 sing N N 120 NH4 N HN4 sing N N 121 U OP3 P sing N N 122 U OP3 HOP3 sing N N 123 U P OP1 doub N N 124 U P OP2 sing N N 125 U P "O5'" sing N N 126 U OP2 HOP2 sing N N 127 U "O5'" "C5'" sing N N 128 U "C5'" "C4'" sing N N 129 U "C5'" "H5'" sing N N 130 U "C5'" "H5''" sing N N 131 U "C4'" "O4'" sing N N 132 U "C4'" "C3'" sing N N 133 U "C4'" "H4'" sing N N 134 U "O4'" "C1'" sing N N 135 U "C3'" "O3'" sing N N 136 U "C3'" "C2'" sing N N 137 U "C3'" "H3'" sing N N 138 U "O3'" "HO3'" sing N N 139 U "C2'" "O2'" sing N N 140 U "C2'" "C1'" sing N N 141 U "C2'" "H2'" sing N N 142 U "O2'" "HO2'" sing N N 143 U "C1'" N1 sing N N 144 U "C1'" "H1'" sing N N 145 U N1 C2 sing N N 146 U N1 C6 sing N N 147 U C2 O2 doub N N 148 U C2 N3 sing N N 149 U N3 C4 sing N N 150 U N3 H3 sing N N 151 U C4 O4 doub N N 152 U C4 C5 sing N N 153 U C5 C6 doub N N 154 U C5 H5 sing N N 155 U C6 H6 sing N N 156 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8UTG 'double helix' 8UTG 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 6 1_555 A A 20 1_555 4.030 1.660 0.715 29.506 -3.272 -114.651 1 A_A6:A20_A A 6 ? A 20 ? 5 4 1 A G 8 1_555 A U 19 1_555 -2.275 -0.588 -0.333 -16.865 0.002 -5.442 2 A_G8:U19_A A 8 ? A 19 ? 28 1 1 A G 5 1_555 A G 18 1_555 -1.522 -3.474 -0.006 -3.913 2.229 91.996 3 A_G5:G18_A A 5 ? A 18 ? 6 3 1 A G 13 1_555 A G 17 1_555 1.568 3.475 -0.031 -3.295 -1.596 -91.640 4 A_G13:G17_A A 13 ? A 17 ? 6 3 1 B G 13 1_555 B G 17 1_555 1.553 3.461 -0.165 1.511 -1.196 -88.437 5 B_G13:G17_B B 13 ? B 17 ? 6 3 1 B G 5 1_555 B G 18 1_555 -1.511 -3.537 -0.139 -0.913 -1.537 92.122 6 B_G5:G18_B B 5 ? B 18 ? 6 3 1 B G 8 1_555 B U 19 1_555 -2.134 -0.544 -0.123 -8.221 -0.270 -4.298 7 B_G8:U19_B B 8 ? B 19 ? 28 1 1 B A 6 1_555 B A 20 1_555 4.069 1.578 0.392 26.287 -5.638 -113.591 8 B_A6:A20_B B 6 ? B 20 ? 5 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 6 1_555 A A 20 1_555 A G 8 1_555 A U 19 1_555 3.576 -1.463 0.804 -35.132 167.887 173.509 -0.752 -1.792 0.680 83.950 17.567 179.521 1 AA_A6G8:U19A20_AA A 6 ? A 20 ? A 8 ? A 19 ? 1 A G 8 1_555 A U 19 1_555 A G 5 1_555 A G 18 1_555 0.958 2.797 -1.373 171.302 -26.146 -33.117 -1.528 -0.357 -0.895 13.435 88.023 -173.564 2 AA_G8G5:G18U19_AA A 8 ? A 19 ? A 5 ? A 18 ? 1 A G 5 1_555 A G 18 1_555 A G 13 1_555 A G 17 1_555 1.527 3.152 -3.295 0.041 -0.230 -123.581 -1.790 0.866 -3.292 0.131 0.023 -123.581 3 AA_G5G13:G17G18_AA A 5 ? A 18 ? A 13 ? A 17 ? 1 A G 13 1_555 A G 17 1_555 B G 13 1_555 B G 17 1_555 0.058 3.521 -0.261 -173.280 39.276 139.377 1.766 -0.007 0.005 19.654 86.710 179.193 4 AB_G13G13:G17G17_BA A 13 ? A 17 ? B 13 ? B 17 ? 1 B G 13 1_555 B G 17 1_555 B G 5 1_555 B G 18 1_555 -1.446 -3.245 3.148 0.466 4.662 124.340 -1.872 0.821 3.075 2.636 -0.263 124.391 5 BB_G13G5:G18G17_BB B 13 ? B 17 ? B 5 ? B 18 ? 1 B G 5 1_555 B G 18 1_555 B G 8 1_555 B U 19 1_555 -0.884 -2.919 1.402 -171.590 27.173 48.780 -1.580 -0.310 0.959 13.874 87.612 174.289 6 BB_G5G8:U19G18_BB B 5 ? B 18 ? B 8 ? B 19 ? 1 B G 8 1_555 B U 19 1_555 B A 6 1_555 B A 20 1_555 3.358 -1.266 -0.826 -29.031 168.141 175.689 -0.617 -1.676 -0.893 84.074 14.516 179.648 7 BB_G8A6:A20U19_BB B 8 ? B 19 ? B 6 ? B 20 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 1U19AI171403-01 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM111749 2 'National Science Foundation (NSF, United States)' 'United States' MCB2028902 3 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' 'United States' HL155178 4 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? 2 NH4 ? ? NH4 ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7SXP _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 32 2 1' _space_group.name_Hall ;P 32 2" ; _space_group.IT_number 154 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 8UTG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.029581 _atom_sites.fract_transf_matrix[1][2] 0.017079 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034158 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006121 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_