HEADER OXIDOREDUCTASE 31-OCT-23 8UUB TITLE STRUCTURE OF HYPOTHIOCYANOUS ACID REDUCTASE (HAR) FROM STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE, PYRIDINE NUCLEOTIDE-DISULFIDE, CLASS I; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE D39; SOURCE 3 ORGANISM_TAXID: 373153; SOURCE 4 STRAIN: D39 / NCTC 7466; SOURCE 5 GENE: SPD_1415; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DISULPHIDE REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.L.SHEARER,M.J.CURRIE,N.DICKERHOF,R.C.J.DOBSON REVDAT 3 22-MAY-24 8UUB 1 JRNL REVDAT 2 24-APR-24 8UUB 1 JRNL REVDAT 1 17-APR-24 8UUB 0 JRNL AUTH H.L.SHEARER,M.J.CURRIE,H.N.AGNEW,C.TRAPPETTI,F.STULL, JRNL AUTH 2 P.E.PACE,J.C.PATON,R.C.J.DOBSON,N.DICKERHOF JRNL TITL HYPOTHIOCYANOUS ACID REDUCTASE IS CRITICAL FOR HOST JRNL TITL 2 COLONIZATION AND INFECTION BY STREPTOCOCCUS PNEUMONIAE. JRNL REF J.BIOL.CHEM. V. 300 07282 2024 JRNL REFN ESSN 1083-351X JRNL PMID 38604564 JRNL DOI 10.1016/J.JBC.2024.107282 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 105305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5590 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7283 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 382 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3343 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 701 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.057 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.036 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.964 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3760 ; 0.014 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5171 ; 2.028 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 510 ; 6.509 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;35.164 ;24.753 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 649 ;12.723 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.129 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 525 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2915 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1921 ; 1.828 ; 1.887 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2448 ; 2.687 ; 2.827 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1839 ; 3.204 ; 2.143 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6096 ; 6.029 ;28.332 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000278752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110989 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 26.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M SODIUM MALONATE DIBASIC, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.21950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 61.12950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 61.12950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.32925 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 61.12950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 61.12950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.10975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 61.12950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.12950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.32925 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 61.12950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.12950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 23.10975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 46.21950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -46.21950 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1183 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 625 O HOH A 1032 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 266 CD GLU A 266 OE1 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 324 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 PHE A 332 CD1 - CE1 - CZ ANGL. DEV. = -8.0 DEGREES REMARK 500 ARG A 366 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 61 44.50 -91.79 REMARK 500 ASN A 125 54.51 -140.83 REMARK 500 LEU A 325 -145.54 -94.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1296 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1297 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1298 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A1299 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A1300 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A1301 DISTANCE = 6.94 ANGSTROMS DBREF1 8UUB A 1 438 UNP A0A0H2ZMK9_STRP2 DBREF2 8UUB A A0A0H2ZMK9 1 438 SEQADV 8UUB GLY A -3 UNP A0A0H2ZMK EXPRESSION TAG SEQADV 8UUB PRO A -2 UNP A0A0H2ZMK EXPRESSION TAG SEQADV 8UUB GLY A -1 UNP A0A0H2ZMK EXPRESSION TAG SEQADV 8UUB SER A 0 UNP A0A0H2ZMK EXPRESSION TAG SEQRES 1 A 442 GLY PRO GLY SER MET LEU THR TYR ASP LEU ILE VAL ILE SEQRES 2 A 442 GLY PHE GLY LYS ALA GLY LYS THR LEU ALA GLY LYS LEU SEQRES 3 A 442 ALA SER ALA GLY LYS LYS VAL ALA LEU VAL GLU ARG SER SEQRES 4 A 442 LYS ALA MET TYR GLY GLY THR CYS ILE ASN ILE GLY CYS SEQRES 5 A 442 ILE PRO THR LYS THR LEU LEU VAL ALA ALA GLU LYS ASP SEQRES 6 A 442 LEU SER PHE GLU GLU VAL ILE ALA THR LYS ASN THR ILE SEQRES 7 A 442 THR GLY ARG LEU ASN GLY LYS ASN TYR THR THR VAL ALA SEQRES 8 A 442 GLY THR GLY VAL ASP ILE PHE ASP ALA GLU ALA HIS PHE SEQRES 9 A 442 LEU SER ASN LYS VAL ILE GLU ILE GLN ALA GLY ASP GLU SEQRES 10 A 442 LYS GLN GLU LEU THR ALA GLU THR ILE VAL ILE ASN THR SEQRES 11 A 442 GLY ALA VAL SER ASN VAL LEU PRO ILE PRO GLY LEU ALA SEQRES 12 A 442 THR SER LYS ASN VAL PHE ASP SER THR GLY ILE GLN SER SEQRES 13 A 442 LEU ASP LYS LEU PRO GLU LYS LEU GLY VAL LEU GLY GLY SEQRES 14 A 442 GLY ASN ILE GLY LEU GLU PHE ALA GLY LEU TYR ASN LYS SEQRES 15 A 442 LEU GLY SER LYS VAL THR VAL LEU ASP THR LEU ASP THR SEQRES 16 A 442 PHE LEU PRO ARG ALA GLU PRO SER ILE ALA ALA LEU ALA SEQRES 17 A 442 LYS GLN TYR LEU GLU GLU ASP GLY ILE GLU LEU LEU GLN SEQRES 18 A 442 ASN ILE HIS THR THR GLU ILE LYS ASN ASP GLY ASP GLN SEQRES 19 A 442 VAL LEU VAL VAL THR GLU ASP GLU THR TYR ARG PHE ASP SEQRES 20 A 442 ALA LEU LEU TYR ALA THR GLY ARG LYS PRO ASN VAL GLU SEQRES 21 A 442 PRO LEU GLN LEU GLU ASN THR ASP ILE GLU LEU THR GLU SEQRES 22 A 442 ARG GLY ALA ILE LYS VAL ASP LYS HIS CYS GLN THR ASN SEQRES 23 A 442 VAL PRO GLY VAL PHE ALA VAL GLY ASP VAL ASN GLY GLY SEQRES 24 A 442 LEU GLN PHE THR TYR ILE SER LEU ASP ASP PHE ARG VAL SEQRES 25 A 442 VAL TYR SER TYR LEU ALA GLY ASP GLY SER TYR THR LEU SEQRES 26 A 442 GLU ASP ARG LEU ASN VAL PRO ASN THR MET PHE ILE THR SEQRES 27 A 442 PRO ALA LEU SER GLN VAL GLY LEU THR GLU SER GLN ALA SEQRES 28 A 442 ALA ASP LEU LYS LEU PRO TYR ALA VAL LYS GLU ILE PRO SEQRES 29 A 442 VAL ALA ALA MET PRO ARG GLY HIS VAL ASN GLY ASP LEU SEQRES 30 A 442 ARG GLY ALA PHE LYS ALA VAL VAL ASN THR GLU THR LYS SEQRES 31 A 442 GLU ILE LEU GLY ALA SER ILE PHE SER GLU GLY SER GLN SEQRES 32 A 442 GLU ILE ILE ASN ILE ILE THR VAL ALA MET ASP ASN LYS SEQRES 33 A 442 ILE PRO TYR THR TYR PHE THR LYS GLN ILE PHE THR HIS SEQRES 34 A 442 PRO THR LEU ALA GLU ASN LEU ASN ASP LEU PHE ALA ILE HET FAD A 501 53 HET MLI A 502 7 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MLI MALONATE ION FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 MLI C3 H2 O4 2- FORMUL 4 HOH *701(H2 O) HELIX 1 AA1 GLY A 12 ALA A 25 1 14 HELIX 2 AA2 SER A 35 TYR A 39 5 5 HELIX 3 AA3 GLY A 41 ILE A 46 1 6 HELIX 4 AA4 GLY A 47 GLU A 59 1 13 HELIX 5 AA5 SER A 63 THR A 89 1 27 HELIX 6 AA6 THR A 148 LEU A 153 5 6 HELIX 7 AA7 GLY A 166 GLY A 180 1 15 HELIX 8 AA8 GLU A 197 ASP A 211 1 15 HELIX 9 AA9 VAL A 255 THR A 263 5 9 HELIX 10 AB1 GLY A 290 GLY A 294 5 5 HELIX 11 AB2 PHE A 298 GLY A 315 1 18 HELIX 12 AB3 THR A 320 ARG A 324 5 5 HELIX 13 AB4 THR A 343 LEU A 350 1 8 HELIX 14 AB5 MET A 364 GLY A 371 1 8 HELIX 15 AB6 GLY A 397 ASN A 411 1 15 HELIX 16 AB7 PRO A 414 LYS A 420 5 7 HELIX 17 AB8 LEU A 428 GLU A 430 5 3 HELIX 18 AB9 ASN A 431 PHE A 436 1 6 SHEET 1 AA1 6 ASP A 92 ASP A 95 0 SHEET 2 AA1 6 VAL A 29 GLU A 33 1 N LEU A 31 O PHE A 94 SHEET 3 AA1 6 LEU A 2 ILE A 9 1 N VAL A 8 O ALA A 30 SHEET 4 AA1 6 GLU A 113 ILE A 124 1 O VAL A 123 N ILE A 7 SHEET 5 AA1 6 VAL A 105 ALA A 110 -1 N ALA A 110 O GLU A 113 SHEET 6 AA1 6 HIS A 99 SER A 102 -1 N LEU A 101 O VAL A 105 SHEET 1 AA2 5 ASP A 92 ASP A 95 0 SHEET 2 AA2 5 VAL A 29 GLU A 33 1 N LEU A 31 O PHE A 94 SHEET 3 AA2 5 LEU A 2 ILE A 9 1 N VAL A 8 O ALA A 30 SHEET 4 AA2 5 GLU A 113 ILE A 124 1 O VAL A 123 N ILE A 7 SHEET 5 AA2 5 VAL A 286 ALA A 288 1 O PHE A 287 N ILE A 124 SHEET 1 AA3 2 ALA A 128 SER A 130 0 SHEET 2 AA3 2 ARG A 251 PRO A 253 -1 O LYS A 252 N VAL A 129 SHEET 1 AA4 5 VAL A 144 PHE A 145 0 SHEET 2 AA4 5 ALA A 244 TYR A 247 1 O LEU A 245 N PHE A 145 SHEET 3 AA4 5 LYS A 159 LEU A 163 1 N LEU A 163 O LEU A 246 SHEET 4 AA4 5 LYS A 182 LEU A 186 1 O LEU A 186 N VAL A 162 SHEET 5 AA4 5 GLU A 214 LEU A 216 1 O GLU A 214 N VAL A 185 SHEET 1 AA5 3 THR A 221 ASP A 227 0 SHEET 2 AA5 3 GLN A 230 THR A 235 -1 O LEU A 232 N LYS A 225 SHEET 3 AA5 3 THR A 239 PHE A 242 -1 O PHE A 242 N VAL A 231 SHEET 1 AA6 5 ASN A 329 MET A 331 0 SHEET 2 AA6 5 LEU A 337 GLY A 341 -1 O LEU A 337 N MET A 331 SHEET 3 AA6 5 ILE A 388 PHE A 394 -1 O ILE A 393 N SER A 338 SHEET 4 AA6 5 ALA A 376 ASN A 382 -1 N ALA A 376 O PHE A 394 SHEET 5 AA6 5 TYR A 354 PRO A 360 -1 N LYS A 357 O ALA A 379 SSBOND 1 CYS A 43 CYS A 48 1555 1555 2.07 CISPEP 1 THR A 334 PRO A 335 0 1.55 CISPEP 2 HIS A 425 PRO A 426 0 -0.02 CISPEP 3 HIS A 425 PRO A 426 0 -3.70 CRYST1 122.259 122.259 92.439 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008179 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008179 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010818 0.00000