HEADER SUGAR BINDING PROTEIN 08-NOV-23 8UWV TITLE CRYSTAL STRUCTURE OF BT3984 SUSD-LIKE FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON VPI-5482 AT 1.1 A RESOLUTION (SPACE GROUP P21) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BT3984 SUSD-LIKE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON VPI-5482; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 GENE: BT_3984; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS SUSD-LIKE, HIGH-MANNOSE N-GLYCAN PUL, BACTEROIDES THETAIOTAOMICRON, KEYWDS 2 SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.E.SASTRE,M.V.A.S.NAVARRO,E.J.SUNDBERG REVDAT 1 22-NOV-23 8UWV 0 JRNL AUTH D.E.SASTRE,M.V.A.S.NAVARRO,E.J.SUNDBERG JRNL TITL CRYSTAL STRUCTURE OF BT3984 SUSD-LIKE FROM BACTEROIDES JRNL TITL 2 THETAIOTAOMICRON VPI-5482 AT 1.1 A RESOLUTION (SPACE GROUP JRNL TITL 3 P21) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 355499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.122 REMARK 3 R VALUE (WORKING SET) : 0.121 REMARK 3 FREE R VALUE : 0.139 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 17777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1800 - 3.3500 1.00 12528 660 0.1431 0.1541 REMARK 3 2 3.3500 - 2.6600 1.00 12355 650 0.1289 0.1462 REMARK 3 3 2.6600 - 2.3200 1.00 12332 649 0.1204 0.1344 REMARK 3 4 2.3200 - 2.1100 1.00 12342 649 0.1100 0.1251 REMARK 3 5 2.1100 - 1.9600 1.00 12300 648 0.1152 0.1286 REMARK 3 6 1.9600 - 1.8400 1.00 12328 649 0.1159 0.1245 REMARK 3 7 1.8400 - 1.7500 1.00 12259 645 0.1131 0.1319 REMARK 3 8 1.7500 - 1.6800 1.00 12304 647 0.1114 0.1346 REMARK 3 9 1.6800 - 1.6100 1.00 12270 646 0.1105 0.1268 REMARK 3 10 1.6100 - 1.5600 1.00 12305 648 0.1089 0.1361 REMARK 3 11 1.5600 - 1.5100 1.00 12343 649 0.1086 0.1255 REMARK 3 12 1.5100 - 1.4600 1.00 12306 648 0.1090 0.1324 REMARK 3 13 1.4600 - 1.4300 1.00 12251 645 0.1102 0.1387 REMARK 3 14 1.4300 - 1.3900 1.00 12296 647 0.1110 0.1355 REMARK 3 15 1.3900 - 1.3600 1.00 12280 646 0.1126 0.1425 REMARK 3 16 1.3600 - 1.3300 1.00 12265 646 0.1119 0.1357 REMARK 3 17 1.3300 - 1.3000 1.00 12261 645 0.1127 0.1400 REMARK 3 18 1.3000 - 1.2800 1.00 12284 647 0.1156 0.1363 REMARK 3 19 1.2800 - 1.2600 1.00 12300 647 0.1163 0.1433 REMARK 3 20 1.2600 - 1.2300 1.00 12270 646 0.1122 0.1426 REMARK 3 21 1.2300 - 1.2100 1.00 12263 645 0.1166 0.1336 REMARK 3 22 1.2100 - 1.2000 0.99 12141 639 0.1150 0.1401 REMARK 3 23 1.2000 - 1.1800 0.98 11997 632 0.1157 0.1329 REMARK 3 24 1.1800 - 1.1600 0.97 11975 630 0.1211 0.1413 REMARK 3 25 1.1600 - 1.1500 0.88 10802 568 0.1221 0.1524 REMARK 3 26 1.1500 - 1.1300 0.78 9576 504 0.1277 0.1513 REMARK 3 27 1.1300 - 1.1200 0.69 8429 443 0.1404 0.1705 REMARK 3 28 1.1200 - 1.1000 0.58 7157 377 0.1547 0.1835 REMARK 3 29 1.1000 - 1.0900 0.42 5136 270 0.1854 0.2255 REMARK 3 30 1.0900 - 1.0800 0.17 2113 112 0.2165 0.2376 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 8013 REMARK 3 ANGLE : 1.777 10936 REMARK 3 CHIRALITY : 0.107 1169 REMARK 3 PLANARITY : 0.013 1450 REMARK 3 DIHEDRAL : 7.883 1098 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UWV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000278862. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS SIRIUS REMARK 200 BEAMLINE : MANACA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97718 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 355545 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.080 REMARK 200 RESOLUTION RANGE LOW (A) : 46.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 41.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.630 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.1 M BIS-TRIS PH 6.5, 25% W/V POLYETHYLENE GLYCOL 3,350 (INDEX REMARK 280 G-11), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.29600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 25 REMARK 465 ASN A 26 REMARK 465 ILE A 27 REMARK 465 ASN A 28 REMARK 465 SER A 29 REMARK 465 ASN A 30 REMARK 465 PRO A 31 REMARK 465 TYR A 32 REMARK 465 GLU A 33 REMARK 465 ALA A 34 REMARK 465 PRO A 35 REMARK 465 ASP A 36 REMARK 465 LEU A 37 REMARK 465 SER A 38 REMARK 465 ALA A 39 REMARK 465 ASP A 40 REMARK 465 GLY A 41 REMARK 465 TYR A 42 REMARK 465 GLU B 25 REMARK 465 ASN B 26 REMARK 465 ILE B 27 REMARK 465 ASN B 28 REMARK 465 SER B 29 REMARK 465 ASN B 30 REMARK 465 PRO B 31 REMARK 465 TYR B 32 REMARK 465 GLU B 33 REMARK 465 ALA B 34 REMARK 465 PRO B 35 REMARK 465 ASP B 36 REMARK 465 LEU B 37 REMARK 465 SER B 38 REMARK 465 ALA B 39 REMARK 465 ASP B 40 REMARK 465 LYS B 537 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 280 CD OE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU B 195 CA CB CG CD OE1 OE2 REMARK 480 ASP B 208 CA CB CG OD1 OD2 REMARK 480 PRO B 480 N CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1166 O HOH A 1193 1.82 REMARK 500 NE2 HIS B 284 O HOH B 602 1.90 REMARK 500 O HOH B 813 O HOH B 1092 1.94 REMARK 500 OE1 GLU A 385 O HOH A 703 1.96 REMARK 500 O HOH B 953 O HOH B 998 1.96 REMARK 500 OE2 GLU B 321 O HOH B 602 2.00 REMARK 500 ND1 HIS B 344 O HOH B 602 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 55 -80.58 -81.62 REMARK 500 LEU A 70 -74.77 -100.04 REMARK 500 SER A 81 34.11 -145.33 REMARK 500 ILE A 108 -89.29 -114.02 REMARK 500 TYR A 155 -73.64 -151.37 REMARK 500 SER A 266 -6.31 78.65 REMARK 500 ASP A 283 -5.30 166.66 REMARK 500 THR A 341 -68.33 -91.78 REMARK 500 VAL A 412 -50.54 -126.73 REMARK 500 TRP A 460 126.41 -38.28 REMARK 500 GLN A 461 -17.52 90.34 REMARK 500 ASN A 509 39.84 -152.56 REMARK 500 VAL B 55 -77.14 -80.19 REMARK 500 LEU B 70 -73.33 -99.81 REMARK 500 SER B 81 32.12 -145.64 REMARK 500 ILE B 108 -88.84 -113.20 REMARK 500 TYR B 155 -74.07 -152.00 REMARK 500 THR B 341 -61.89 -92.60 REMARK 500 TRP B 460 127.35 -38.42 REMARK 500 GLN B 461 -18.92 89.61 REMARK 500 ASN B 509 37.30 -149.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1474 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A1475 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A1476 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1477 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A1478 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A1479 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A1480 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A1481 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH A1482 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A1483 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A1484 DISTANCE = 7.34 ANGSTROMS REMARK 525 HOH A1485 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH A1486 DISTANCE = 7.71 ANGSTROMS REMARK 525 HOH A1487 DISTANCE = 8.75 ANGSTROMS REMARK 525 HOH B1370 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B1371 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B1372 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B1373 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B1374 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B1375 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B1376 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B1377 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH B1378 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH B1379 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH B1380 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH B1381 DISTANCE = 6.78 ANGSTROMS REMARK 525 HOH B1382 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH B1383 DISTANCE = 7.98 ANGSTROMS REMARK 525 HOH B1384 DISTANCE = 8.35 ANGSTROMS REMARK 525 HOH B1385 DISTANCE = 8.70 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 321 OE1 REMARK 620 2 GLU A 321 OE2 47.4 REMARK 620 N 1 DBREF 8UWV A 25 537 UNP Q8A0N7 Q8A0N7_BACTN 25 537 DBREF 8UWV B 25 537 UNP Q8A0N7 Q8A0N7_BACTN 25 537 SEQRES 1 A 513 GLU ASN ILE ASN SER ASN PRO TYR GLU ALA PRO ASP LEU SEQRES 2 A 513 SER ALA ASP GLY TYR ALA LEU GLY SER ALA MET ASN ASN SEQRES 3 A 513 LEU ALA GLY CYS VAL VAL SER PRO ASP VAL ASN THR ALA SEQRES 4 A 513 GLN PHE THR ASP CYS LEU LEU GLY GLY PRO LEU GLY GLY SEQRES 5 A 513 TYR PHE ALA ASP SER ASN ALA GLY PHE THR GLU THR ILE SEQRES 6 A 513 SER ASN PHE ASN PRO LYS ASP ASP TRP SER ARG VAL PHE SEQRES 7 A 513 LEU LYS SER ASP LYS ILE ILE PRO THR LEU TYR SER ASN SEQRES 8 A 513 LEU THR GLN VAL LYS LEU VAL SER GLN ASN THR ASN ASP SEQRES 9 A 513 PRO VAL PRO TYR ALA ILE ALA GLN VAL ILE LYS VAL ALA SEQRES 10 A 513 ALA MET HIS ARG VAL THR ASP ALA PHE GLY PRO ILE PRO SEQRES 11 A 513 TYR SER GLN ILE GLY ALA ASN GLY GLU ILE ALA THR PRO SEQRES 12 A 513 TYR ASP SER GLN GLU VAL THR TYR ASN THR PHE PHE ASP SEQRES 13 A 513 GLU LEU ASN ALA ALA ILE ALA THR LEU ASN GLU ASN SER SEQRES 14 A 513 ASN GLU GLN LEU VAL PRO THR ALA ASP TYR ILE TYR LYS SEQRES 15 A 513 GLY ASP VAL LYS LYS TRP ILE ARG PHE ALA ASN SER LEU SEQRES 16 A 513 LYS LEU ARG LEU ALA ILE ARG ILE ALA TYR ALA ASN PRO SEQRES 17 A 513 VAL LYS ALA GLN GLN MET ALA GLU GLU ALA VAL ASN PRO SEQRES 18 A 513 ALA ASN GLY GLY VAL ILE GLU SER ASN ALA ASP ASN ALA SEQRES 19 A 513 THR TRP ASN TYR PHE GLU THR SER GLN ASN PRO ILE TYR SEQRES 20 A 513 VAL ALA THR ARG TYR ASN GLN VAL GLN THR SER ASP HIS SEQRES 21 A 513 GLY GLY VAL PRO CYS LEU THR GLY GLY ASP THR HIS ALA SEQRES 22 A 513 ALA ALA ASP ILE ILE CYS TYR MET ASN GLY TYR LYS ASP SEQRES 23 A 513 ASN ARG ARG GLU LYS PHE PHE THR LYS SER GLU TRP ALA SEQRES 24 A 513 GLY GLN ASP TYR VAL GLY MET ARG ARG GLY ILE VAL ILE SEQRES 25 A 513 PRO GLU LEU LYS THR THR GLY HIS LYS TYR SER GLY VAL SEQRES 26 A 513 ASN ILE ALA PRO THR SER PRO LEU TYR TRP MET ASN ALA SEQRES 27 A 513 ALA GLU VAL ALA PHE LEU ARG ALA GLU GLY GLN ALA VAL SEQRES 28 A 513 PHE ASN PHE SER MET GLY GLY THR ALA GLU SER PHE TYR SEQRES 29 A 513 ASN GLN GLY ILE ARG LEU SER PHE GLU GLN TRP GLY ALA SEQRES 30 A 513 ASP GLY VAL GLU ASP TYR LEU LYS ASP ASP VAL ASN LYS SEQRES 31 A 513 PRO THR ALA TYR THR ASP PRO ALA GLY THR ASN THR TYR SEQRES 32 A 513 GLN ASN ALA LEU SER ASN ILE THR ILE LYS TRP ASN ASP SEQRES 33 A 513 SER ALA ASP LYS GLU GLU LYS GLN GLU ARG ILE ILE VAL SEQRES 34 A 513 GLN LYS TRP ILE ALA ASN TRP GLN LEU GLY ASN GLU ALA SEQRES 35 A 513 TRP ALA ASP PHE ARG ARG THR GLY TYR PRO LYS LEU ILE SEQRES 36 A 513 PRO VAL LYS GLU ASN LYS SER GLY GLY VAL VAL ASP SER SEQRES 37 A 513 GLU LYS GLY ALA ARG ARG MET PRO TYR PRO LEU ASP GLU SEQRES 38 A 513 PHE VAL SER ASN LYS ALA ASN VAL GLU TYR ALA ILE ALA SEQRES 39 A 513 ASN TYR LEU HIS GLY ALA ASP ASN MET ALA THR ASP VAL SEQRES 40 A 513 TRP TRP ALA SER LYS LYS SEQRES 1 B 513 GLU ASN ILE ASN SER ASN PRO TYR GLU ALA PRO ASP LEU SEQRES 2 B 513 SER ALA ASP GLY TYR ALA LEU GLY SER ALA MET ASN ASN SEQRES 3 B 513 LEU ALA GLY CYS VAL VAL SER PRO ASP VAL ASN THR ALA SEQRES 4 B 513 GLN PHE THR ASP CYS LEU LEU GLY GLY PRO LEU GLY GLY SEQRES 5 B 513 TYR PHE ALA ASP SER ASN ALA GLY PHE THR GLU THR ILE SEQRES 6 B 513 SER ASN PHE ASN PRO LYS ASP ASP TRP SER ARG VAL PHE SEQRES 7 B 513 LEU LYS SER ASP LYS ILE ILE PRO THR LEU TYR SER ASN SEQRES 8 B 513 LEU THR GLN VAL LYS LEU VAL SER GLN ASN THR ASN ASP SEQRES 9 B 513 PRO VAL PRO TYR ALA ILE ALA GLN VAL ILE LYS VAL ALA SEQRES 10 B 513 ALA MET HIS ARG VAL THR ASP ALA PHE GLY PRO ILE PRO SEQRES 11 B 513 TYR SER GLN ILE GLY ALA ASN GLY GLU ILE ALA THR PRO SEQRES 12 B 513 TYR ASP SER GLN GLU VAL THR TYR ASN THR PHE PHE ASP SEQRES 13 B 513 GLU LEU ASN ALA ALA ILE ALA THR LEU ASN GLU ASN SER SEQRES 14 B 513 ASN GLU GLN LEU VAL PRO THR ALA ASP TYR ILE TYR LYS SEQRES 15 B 513 GLY ASP VAL LYS LYS TRP ILE ARG PHE ALA ASN SER LEU SEQRES 16 B 513 LYS LEU ARG LEU ALA ILE ARG ILE ALA TYR ALA ASN PRO SEQRES 17 B 513 VAL LYS ALA GLN GLN MET ALA GLU GLU ALA VAL ASN PRO SEQRES 18 B 513 ALA ASN GLY GLY VAL ILE GLU SER ASN ALA ASP ASN ALA SEQRES 19 B 513 THR TRP ASN TYR PHE GLU THR SER GLN ASN PRO ILE TYR SEQRES 20 B 513 VAL ALA THR ARG TYR ASN GLN VAL GLN THR SER ASP HIS SEQRES 21 B 513 GLY GLY VAL PRO CYS LEU THR GLY GLY ASP THR HIS ALA SEQRES 22 B 513 ALA ALA ASP ILE ILE CYS TYR MET ASN GLY TYR LYS ASP SEQRES 23 B 513 ASN ARG ARG GLU LYS PHE PHE THR LYS SER GLU TRP ALA SEQRES 24 B 513 GLY GLN ASP TYR VAL GLY MET ARG ARG GLY ILE VAL ILE SEQRES 25 B 513 PRO GLU LEU LYS THR THR GLY HIS LYS TYR SER GLY VAL SEQRES 26 B 513 ASN ILE ALA PRO THR SER PRO LEU TYR TRP MET ASN ALA SEQRES 27 B 513 ALA GLU VAL ALA PHE LEU ARG ALA GLU GLY GLN ALA VAL SEQRES 28 B 513 PHE ASN PHE SER MET GLY GLY THR ALA GLU SER PHE TYR SEQRES 29 B 513 ASN GLN GLY ILE ARG LEU SER PHE GLU GLN TRP GLY ALA SEQRES 30 B 513 ASP GLY VAL GLU ASP TYR LEU LYS ASP ASP VAL ASN LYS SEQRES 31 B 513 PRO THR ALA TYR THR ASP PRO ALA GLY THR ASN THR TYR SEQRES 32 B 513 GLN ASN ALA LEU SER ASN ILE THR ILE LYS TRP ASN ASP SEQRES 33 B 513 SER ALA ASP LYS GLU GLU LYS GLN GLU ARG ILE ILE VAL SEQRES 34 B 513 GLN LYS TRP ILE ALA ASN TRP GLN LEU GLY ASN GLU ALA SEQRES 35 B 513 TRP ALA ASP PHE ARG ARG THR GLY TYR PRO LYS LEU ILE SEQRES 36 B 513 PRO VAL LYS GLU ASN LYS SER GLY GLY VAL VAL ASP SER SEQRES 37 B 513 GLU LYS GLY ALA ARG ARG MET PRO TYR PRO LEU ASP GLU SEQRES 38 B 513 PHE VAL SER ASN LYS ALA ASN VAL GLU TYR ALA ILE ALA SEQRES 39 B 513 ASN TYR LEU HIS GLY ALA ASP ASN MET ALA THR ASP VAL SEQRES 40 B 513 TRP TRP ALA SER LYS LYS HET MG A 601 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG MG 2+ FORMUL 4 HOH *1572(H2 O) HELIX 1 AA1 ALA A 43 GLY A 53 1 11 HELIX 2 AA2 ASP A 59 CYS A 68 1 10 HELIX 3 AA3 LEU A 70 GLY A 75 1 6 HELIX 4 AA4 LYS A 95 ARG A 100 1 6 HELIX 5 AA5 ARG A 100 SER A 105 1 6 HELIX 6 AA6 ILE A 108 ASN A 127 1 20 HELIX 7 AA7 PRO A 129 GLY A 151 1 23 HELIX 8 AA8 SER A 170 ASN A 192 1 23 HELIX 9 AA9 VAL A 198 ASP A 202 5 5 HELIX 10 AB1 ASP A 208 ILE A 227 1 20 HELIX 11 AB2 ASN A 231 ASN A 244 1 14 HELIX 12 AB3 PRO A 245 GLY A 248 5 4 HELIX 13 AB4 SER A 253 ASN A 257 5 5 HELIX 14 AB5 ASN A 268 TYR A 276 1 9 HELIX 15 AB6 ALA A 298 TYR A 308 1 11 HELIX 16 AB7 ARG A 312 PHE A 317 1 6 HELIX 17 AB8 THR A 342 TYR A 346 5 5 HELIX 18 AB9 ASN A 361 ASN A 377 1 17 HELIX 19 AC1 THR A 383 GLY A 400 1 18 HELIX 20 AC2 GLY A 403 LYS A 409 1 7 HELIX 21 AC3 ASP A 443 ASN A 459 1 17 HELIX 22 AC4 LEU A 462 GLY A 474 1 13 HELIX 23 AC5 ASP A 504 ASN A 509 1 6 HELIX 24 AC6 ASN A 509 TYR A 520 1 12 HELIX 25 AC7 SER B 46 GLY B 53 1 8 HELIX 26 AC8 ASP B 59 CYS B 68 1 10 HELIX 27 AC9 LEU B 70 GLY B 75 1 6 HELIX 28 AD1 LYS B 95 ARG B 100 1 6 HELIX 29 AD2 ARG B 100 SER B 105 1 6 HELIX 30 AD3 ILE B 108 ASN B 127 1 20 HELIX 31 AD4 PRO B 129 GLY B 151 1 23 HELIX 32 AD5 SER B 170 ASN B 192 1 23 HELIX 33 AD6 VAL B 198 ASP B 202 5 5 HELIX 34 AD7 ASP B 208 ILE B 227 1 20 HELIX 35 AD8 ASN B 231 ASN B 244 1 14 HELIX 36 AD9 PRO B 245 GLY B 248 5 4 HELIX 37 AE1 SER B 253 ASN B 257 5 5 HELIX 38 AE2 ASN B 268 TYR B 276 1 9 HELIX 39 AE3 GLN B 280 HIS B 284 5 5 HELIX 40 AE4 ALA B 298 TYR B 308 1 11 HELIX 41 AE5 ARG B 312 PHE B 317 1 6 HELIX 42 AE6 THR B 342 TYR B 346 5 5 HELIX 43 AE7 ASN B 361 ASN B 377 1 17 HELIX 44 AE8 THR B 383 GLY B 400 1 18 HELIX 45 AE9 GLY B 403 LYS B 409 1 7 HELIX 46 AF1 ASP B 443 ASN B 459 1 17 HELIX 47 AF2 LEU B 462 GLY B 474 1 13 HELIX 48 AF3 ASP B 504 ASN B 509 1 6 HELIX 49 AF4 ASN B 509 TYR B 520 1 12 SHEET 1 AA1 2 PHE A 78 ASP A 80 0 SHEET 2 AA1 2 THR A 295 ALA A 297 -1 O HIS A 296 N ALA A 79 SHEET 1 AA2 2 ALA A 258 TRP A 260 0 SHEET 2 AA2 2 LEU A 357 MET A 360 -1 O LEU A 357 N TRP A 260 SHEET 1 AA3 2 PHE B 78 ASP B 80 0 SHEET 2 AA3 2 THR B 295 ALA B 297 -1 O HIS B 296 N ALA B 79 SHEET 1 AA4 2 ALA B 258 TRP B 260 0 SHEET 2 AA4 2 LEU B 357 MET B 360 -1 O TRP B 359 N ALA B 258 LINK OE1 GLU A 321 MG MG A 601 1555 1555 2.95 LINK OE2 GLU A 321 MG MG A 601 1555 1555 1.92 CISPEP 1 TYR A 475 PRO A 476 0 -8.56 CISPEP 2 TYR B 475 PRO B 476 0 -9.07 CRYST1 56.370 82.592 100.265 90.00 98.88 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017740 0.000000 0.002773 0.00000 SCALE2 0.000000 0.012108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010095 0.00000