HEADER MEMBRANE PROTEIN 20-NOV-23 8V1G TITLE PLASMODIUM FALCIPARUM NIEMANN-PICK TYPE C1-RELATED PROTEIN BOUND WITH TITLE 2 MMV009108 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIEMANN-PICK TYPE C1-RELATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 GENE: PF3D7_0107500; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS NIEMANN-PICK TYPE C1-RELATED PROTEIN, NCR1, CHOLESTEROL TRANSPORTER, KEYWDS 2 PLASMODIUM FALCIPARUM, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Z.ZHANG,M.LYU REVDAT 1 20-NOV-24 8V1G 0 JRNL AUTH Z.ZHANG,M.LYU JRNL TITL PLASMODIUM FALCIPARUM NIEMANN-PICK TYPE C1-RELATED PROTEIN JRNL TITL 2 BOUND WITH MMV009108 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.980 REMARK 3 NUMBER OF PARTICLES : 82204 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8V1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000279336. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : NIEMANN-PICK TYPE C1-RELATED REMARK 245 PROTEIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4050.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 81000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 VAL A 3 REMARK 465 LYS A 4 REMARK 465 VAL A 181 REMARK 465 LEU A 182 REMARK 465 SER A 183 REMARK 465 LEU A 184 REMARK 465 ALA A 185 REMARK 465 GLY A 186 REMARK 465 LYS A 187 REMARK 465 GLU A 188 REMARK 465 ASN A 189 REMARK 465 ASN A 190 REMARK 465 ASP A 191 REMARK 465 ASP A 192 REMARK 465 THR A 193 REMARK 465 LEU A 194 REMARK 465 ILE A 195 REMARK 465 GLU A 196 REMARK 465 GLY A 197 REMARK 465 ASP A 198 REMARK 465 ASN A 199 REMARK 465 LYS A 200 REMARK 465 ASN A 201 REMARK 465 ASP A 202 REMARK 465 GLU A 203 REMARK 465 GLU A 204 REMARK 465 THR A 205 REMARK 465 SER A 206 REMARK 465 ALA A 207 REMARK 465 ASN A 208 REMARK 465 ASN A 209 REMARK 465 ASN A 210 REMARK 465 ASN A 211 REMARK 465 ASN A 212 REMARK 465 GLU A 213 REMARK 465 ASP A 214 REMARK 465 ASP A 215 REMARK 465 ASN A 216 REMARK 465 ASN A 217 REMARK 465 GLU A 218 REMARK 465 ASP A 219 REMARK 465 ASP A 220 REMARK 465 ASN A 221 REMARK 465 ASN A 222 REMARK 465 GLU A 223 REMARK 465 ASP A 224 REMARK 465 ASP A 225 REMARK 465 ASN A 226 REMARK 465 ASN A 227 REMARK 465 GLU A 228 REMARK 465 ASP A 229 REMARK 465 ASP A 230 REMARK 465 ASN A 231 REMARK 465 ASN A 232 REMARK 465 GLU A 233 REMARK 465 ASN A 234 REMARK 465 ASP A 235 REMARK 465 ASN A 236 REMARK 465 ASN A 237 REMARK 465 ASN A 238 REMARK 465 ASN A 239 REMARK 465 ASN A 240 REMARK 465 GLU A 241 REMARK 465 ASP A 242 REMARK 465 ASP A 243 REMARK 465 ASN A 244 REMARK 465 ASN A 245 REMARK 465 ASN A 246 REMARK 465 ASP A 247 REMARK 465 ASP A 248 REMARK 465 ASP A 249 REMARK 465 ASP A 250 REMARK 465 ASP A 251 REMARK 465 GLU A 252 REMARK 465 ASP A 253 REMARK 465 ASN A 254 REMARK 465 GLU A 255 REMARK 465 GLU A 256 REMARK 465 GLU A 257 REMARK 465 ASP A 258 REMARK 465 GLU A 259 REMARK 465 GLU A 260 REMARK 465 LYS A 261 REMARK 465 GLN A 262 REMARK 465 LYS A 263 REMARK 465 SER A 264 REMARK 465 LEU A 265 REMARK 465 ARG A 266 REMARK 465 GLU A 267 REMARK 465 LYS A 268 REMARK 465 LEU A 269 REMARK 465 TYR A 270 REMARK 465 ARG A 271 REMARK 465 LYS A 272 REMARK 465 ILE A 273 REMARK 465 TYR A 274 REMARK 465 GLU A 275 REMARK 465 MET A 276 REMARK 465 LEU A 277 REMARK 465 LYS A 278 REMARK 465 LYS A 279 REMARK 465 LYS A 280 REMARK 465 LYS A 281 REMARK 465 GLU A 282 REMARK 465 ASN A 283 REMARK 465 ILE A 284 REMARK 465 VAL A 285 REMARK 465 LEU A 286 REMARK 465 ASP A 287 REMARK 465 GLU A 288 REMARK 465 ASN A 289 REMARK 465 ASN A 290 REMARK 465 PRO A 291 REMARK 465 ILE A 675 REMARK 465 PHE A 676 REMARK 465 MET A 677 REMARK 465 LYS A 678 REMARK 465 SER A 679 REMARK 465 SER A 680 REMARK 465 LYS A 681 REMARK 465 LYS A 682 REMARK 465 ASN A 683 REMARK 465 LYS A 684 REMARK 465 LYS A 685 REMARK 465 GLU A 686 REMARK 465 ASN A 687 REMARK 465 LYS A 688 REMARK 465 GLU A 689 REMARK 465 ASN A 690 REMARK 465 ASN A 691 REMARK 465 ILE A 692 REMARK 465 HIS A 693 REMARK 465 ASP A 694 REMARK 465 ASP A 695 REMARK 465 GLY A 696 REMARK 465 ASP A 697 REMARK 465 ASN A 698 REMARK 465 ASP A 699 REMARK 465 ASN A 700 REMARK 465 ASP A 701 REMARK 465 GLU A 702 REMARK 465 LYS A 703 REMARK 465 LYS A 704 REMARK 465 LYS A 705 REMARK 465 ASP A 706 REMARK 465 LEU A 707 REMARK 465 SER A 708 REMARK 465 LEU A 709 REMARK 465 GLU A 710 REMARK 465 VAL A 711 REMARK 465 LYS A 712 REMARK 465 ASN A 713 REMARK 465 ASN A 714 REMARK 465 GLU A 715 REMARK 465 ASP A 716 REMARK 465 ASP A 717 REMARK 465 TYR A 718 REMARK 465 GLU A 719 REMARK 465 ASN A 720 REMARK 465 ILE A 737 REMARK 465 ASN A 738 REMARK 465 LYS A 739 REMARK 465 LYS A 740 REMARK 465 LYS A 741 REMARK 465 LYS A 742 REMARK 465 ASN A 743 REMARK 465 ALA A 744 REMARK 465 ALA A 745 REMARK 465 LEU A 746 REMARK 465 VAL A 747 REMARK 465 TYR A 748 REMARK 465 ALA A 749 REMARK 465 SER A 750 REMARK 465 ASN A 751 REMARK 465 ASN A 752 REMARK 465 GLY A 753 REMARK 465 MET A 754 REMARK 465 SER A 755 REMARK 465 SER A 756 REMARK 465 ASN A 757 REMARK 465 LEU A 758 REMARK 465 ASN A 759 REMARK 465 ASN A 760 REMARK 465 VAL A 761 REMARK 465 ASN A 762 REMARK 465 GLU A 763 REMARK 465 ASP A 764 REMARK 465 GLY A 765 REMARK 465 PHE A 766 REMARK 465 PRO A 767 REMARK 465 ASN A 768 REMARK 465 PRO A 769 REMARK 465 SER A 770 REMARK 465 LYS A 771 REMARK 465 ILE A 772 REMARK 465 VAL A 773 REMARK 465 SER A 774 REMARK 465 MET A 775 REMARK 465 GLU A 776 REMARK 465 ASP A 777 REMARK 465 VAL A 778 REMARK 465 LYS A 779 REMARK 465 LYS A 780 REMARK 465 ARG A 781 REMARK 465 ASN A 782 REMARK 465 ILE A 783 REMARK 465 LYS A 784 REMARK 465 LYS A 785 REMARK 465 ASP A 786 REMARK 465 ASP A 787 REMARK 465 ALA A 788 REMARK 465 TYR A 789 REMARK 465 ILE A 790 REMARK 465 ASN A 791 REMARK 465 LYS A 792 REMARK 465 GLU A 793 REMARK 465 ASP A 794 REMARK 465 GLU A 795 REMARK 465 GLU A 796 REMARK 465 GLY A 797 REMARK 465 GLY A 798 REMARK 465 GLY A 799 REMARK 465 TYR A 800 REMARK 465 TYR A 801 REMARK 465 ASN A 802 REMARK 465 LYS A 803 REMARK 465 ASP A 804 REMARK 465 ASP A 805 REMARK 465 ASN A 806 REMARK 465 LYS A 807 REMARK 465 LYS A 808 REMARK 465 LYS A 809 REMARK 465 ASP A 810 REMARK 465 ILE A 811 REMARK 465 LEU A 812 REMARK 465 GLY A 813 REMARK 465 LYS A 814 REMARK 465 LYS A 815 REMARK 465 GLN A 816 REMARK 465 LYS A 817 REMARK 465 LYS A 818 REMARK 465 ASN A 819 REMARK 465 ASN A 820 REMARK 465 ASN A 821 REMARK 465 ASN A 822 REMARK 465 VAL A 823 REMARK 465 THR A 824 REMARK 465 LEU A 825 REMARK 465 VAL A 826 REMARK 465 SER A 827 REMARK 465 LYS A 828 REMARK 465 LYS A 829 REMARK 465 GLY A 830 REMARK 465 GLU A 831 REMARK 465 ASP A 832 REMARK 465 ASN A 833 REMARK 465 GLU A 834 REMARK 465 LEU A 835 REMARK 465 ASP A 836 REMARK 465 VAL A 837 REMARK 465 TYR A 838 REMARK 465 TYR A 839 REMARK 465 GLU A 840 REMARK 465 ASN A 841 REMARK 465 LEU A 842 REMARK 465 ASP A 843 REMARK 465 GLU A 844 REMARK 465 LYS A 845 REMARK 465 THR A 846 REMARK 465 ASN A 847 REMARK 465 ASP A 848 REMARK 465 LYS A 849 REMARK 465 TYR A 850 REMARK 465 LYS A 851 REMARK 465 MET A 852 REMARK 465 ASN A 853 REMARK 465 ASN A 854 REMARK 465 ILE A 855 REMARK 465 LYS A 856 REMARK 465 SER A 857 REMARK 465 SER A 858 REMARK 465 LYS A 859 REMARK 465 LEU A 860 REMARK 465 LYS A 861 REMARK 465 TYR A 862 REMARK 465 ASP A 863 REMARK 465 ASN A 864 REMARK 465 ASP A 865 REMARK 465 LYS A 866 REMARK 465 LYS A 867 REMARK 465 ASP A 868 REMARK 465 GLY A 869 REMARK 465 ALA A 870 REMARK 465 ILE A 871 REMARK 465 ILE A 872 REMARK 465 ASN A 873 REMARK 465 ASN A 874 REMARK 465 ARG A 875 REMARK 465 PRO A 876 REMARK 465 SER A 877 REMARK 465 SER A 878 REMARK 465 ASP A 879 REMARK 465 GLU A 880 REMARK 465 GLU A 881 REMARK 465 TYR A 882 REMARK 465 LYS A 883 REMARK 465 GLU A 884 REMARK 465 GLU A 885 REMARK 465 LYS A 886 REMARK 465 ASP A 887 REMARK 465 LYS A 888 REMARK 465 ASN A 889 REMARK 465 LYS A 890 REMARK 465 ILE A 891 REMARK 465 ASN A 892 REMARK 465 ILE A 893 REMARK 465 LEU A 894 REMARK 465 ASN A 895 REMARK 465 ASP A 896 REMARK 465 VAL A 897 REMARK 465 PHE A 898 REMARK 465 ASN A 899 REMARK 465 ASP A 900 REMARK 465 ILE A 901 REMARK 465 THR A 902 REMARK 465 ILE A 903 REMARK 465 LYS A 904 REMARK 465 PRO A 905 REMARK 465 ASN A 906 REMARK 465 GLU A 907 REMARK 465 ASN A 908 REMARK 465 ILE A 909 REMARK 465 LEU A 910 REMARK 465 LEU A 911 REMARK 465 ASP A 912 REMARK 465 ARG A 913 REMARK 465 GLY A 914 REMARK 465 ASP A 915 REMARK 465 VAL A 916 REMARK 465 ILE A 917 REMARK 465 LYS A 918 REMARK 465 SER A 919 REMARK 465 SER A 920 REMARK 465 GLY A 921 REMARK 465 TYR A 922 REMARK 465 ASP A 923 REMARK 465 SER A 924 REMARK 465 SER A 925 REMARK 465 TYR A 926 REMARK 465 ASN A 927 REMARK 465 ASP A 928 REMARK 465 LEU A 929 REMARK 465 GLN A 930 REMARK 465 SER A 931 REMARK 465 SER A 932 REMARK 465 SER A 933 REMARK 465 LEU A 934 REMARK 465 PRO A 935 REMARK 465 ASN A 936 REMARK 465 PRO A 937 REMARK 465 SER A 938 REMARK 465 SER A 939 REMARK 465 ASN A 940 REMARK 465 GLU A 941 REMARK 465 VAL A 942 REMARK 465 LEU A 943 REMARK 465 ASN A 944 REMARK 465 LYS A 945 REMARK 465 THR A 946 REMARK 465 THR A 947 REMARK 465 MET A 948 REMARK 465 VAL A 949 REMARK 465 TYR A 950 REMARK 465 ASN A 951 REMARK 465 GLU A 952 REMARK 465 THR A 953 REMARK 465 ASP A 954 REMARK 465 LEU A 955 REMARK 465 LYS A 956 REMARK 465 ASP A 957 REMARK 465 ASN A 958 REMARK 465 LYS A 959 REMARK 465 LYS A 960 REMARK 465 GLU A 961 REMARK 465 ILE A 962 REMARK 465 LYS A 963 REMARK 465 SER A 964 REMARK 465 SER A 965 REMARK 465 LYS A 966 REMARK 465 LYS A 967 REMARK 465 ASN A 968 REMARK 465 VAL A 969 REMARK 465 LYS A 970 REMARK 465 ASP A 971 REMARK 465 ILE A 972 REMARK 465 LYS A 973 REMARK 465 LYS A 974 REMARK 465 SER A 975 REMARK 465 ASP A 976 REMARK 465 MET A 977 REMARK 465 ILE A 978 REMARK 465 HIS A 979 REMARK 465 ASP A 980 REMARK 465 ASP A 981 REMARK 465 THR A 982 REMARK 465 TYR A 983 REMARK 465 ASP A 984 REMARK 465 ILE A 985 REMARK 465 ILE A 986 REMARK 465 ASN A 987 REMARK 465 SER A 988 REMARK 465 ASN A 989 REMARK 465 ASN A 990 REMARK 465 LYS A 991 REMARK 465 ASN A 992 REMARK 465 ILE A 993 REMARK 465 LEU A 994 REMARK 465 LEU A 995 REMARK 465 SER A 996 REMARK 465 SER A 997 REMARK 465 ASN A 998 REMARK 465 GLU A 999 REMARK 465 ILE A 1000 REMARK 465 ASN A 1001 REMARK 465 ASN A 1002 REMARK 465 ASN A 1003 REMARK 465 SER A 1004 REMARK 465 ASN A 1005 REMARK 465 ASN A 1006 REMARK 465 THR A 1007 REMARK 465 ASN A 1008 REMARK 465 LYS A 1009 REMARK 465 PHE A 1010 REMARK 465 ASN A 1011 REMARK 465 ASN A 1012 REMARK 465 ASN A 1013 REMARK 465 SER A 1014 REMARK 465 THR A 1015 REMARK 465 GLU A 1016 REMARK 465 LEU A 1017 REMARK 465 ALA A 1018 REMARK 465 THR A 1019 REMARK 465 LYS A 1020 REMARK 465 ASP A 1021 REMARK 465 THR A 1022 REMARK 465 GLN A 1023 REMARK 465 GLN A 1024 REMARK 465 PHE A 1025 REMARK 465 ILE A 1026 REMARK 465 ASN A 1027 REMARK 465 GLY A 1028 REMARK 465 HIS A 1029 REMARK 465 ASP A 1030 REMARK 465 LYS A 1031 REMARK 465 ASN A 1032 REMARK 465 ILE A 1033 REMARK 465 TYR A 1034 REMARK 465 LEU A 1035 REMARK 465 LEU A 1036 REMARK 465 SER A 1037 REMARK 465 SER A 1038 REMARK 465 HIS A 1039 REMARK 465 ASP A 1040 REMARK 465 ASN A 1041 REMARK 465 ALA A 1042 REMARK 465 LEU A 1043 REMARK 465 PHE A 1044 REMARK 465 TYR A 1045 REMARK 465 LYS A 1046 REMARK 465 ASN A 1152 REMARK 465 THR A 1153 REMARK 465 LYS A 1154 REMARK 465 GLU A 1155 REMARK 465 ALA A 1156 REMARK 465 ALA A 1157 REMARK 465 SER A 1158 REMARK 465 SER A 1159 REMARK 465 PHE A 1160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 LEU A 136 CG CD1 CD2 REMARK 470 LYS A 491 CG CD CE NZ REMARK 470 LEU A 671 CG CD1 CD2 REMARK 470 PHE A 672 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 673 CG CD NE CZ NH1 NH2 REMARK 470 TYR A1047 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 132 19.50 57.95 REMARK 500 ASN A 133 23.02 -140.95 REMARK 500 GLU A 135 39.55 -99.84 REMARK 500 THR A 517 -169.44 -126.28 REMARK 500 THR A 645 -61.35 -106.44 REMARK 500 ASN A1179 52.95 39.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-42885 RELATED DB: EMDB REMARK 900 PLASMODIUM FALCIPARUM NIEMANN-PICK TYPE C1-RELATED PROTEIN BOUND REMARK 900 WITH MMV009108 DBREF 8V1G A 1 1470 UNP Q8I266 Q8I266_PLAF7 1 1470 SEQRES 1 A 1470 MET PHE VAL LYS ASN PHE ILE HIS LYS LEU LYS GLU LEU SEQRES 2 A 1470 LYS GLN LYS SER LEU ASP LYS PHE ALA ASN LEU LEU TYR SEQRES 3 A 1470 ASP TYR GLY GLY TYR VAL TYR ASP ARG PRO CYS THR PHE SEQRES 4 A 1470 ILE ILE CYS SER LEU ILE CYS CYS LEU LEU LEU THR CYS SEQRES 5 A 1470 GLY PHE TYR PHE LYS GLU HIS GLU LYS ASP ILE TYR LYS SEQRES 6 A 1470 LEU TYR SER ILE SER ASN SER TYR ALA TYR GLU THR ASN SEQRES 7 A 1470 GLU THR ILE ASN ASP PHE PHE TYR LYS SER ARG ARG CYS SEQRES 8 A 1470 PHE ILE LEU VAL GLU SER ASN VAL ASN LEU LEU LYS PRO SEQRES 9 A 1470 LYS ILE LEU ARG GLU LEU GLN LYS PHE GLU GLU GLY THR SEQRES 10 A 1470 LYS ASP ILE GLU VAL ASP LEU SER GLU ILE ASN GLU CYS SEQRES 11 A 1470 LYS THR ASN SER GLU LEU PRO PRO GLU GLN SER HIS VAL SEQRES 12 A 1470 ALA LYS GLU LEU TYR LYS THR LEU ILE GLN ARG SER GLU SEQRES 13 A 1470 GLU ASN LEU LYS SER GLY LYS ILE ASN GLY SER LEU PHE SEQRES 14 A 1470 ASP TYR SER ASP LEU ASP GLU ASN GLY LYS SER VAL LEU SEQRES 15 A 1470 SER LEU ALA GLY LYS GLU ASN ASN ASP ASP THR LEU ILE SEQRES 16 A 1470 GLU GLY ASP ASN LYS ASN ASP GLU GLU THR SER ALA ASN SEQRES 17 A 1470 ASN ASN ASN ASN GLU ASP ASP ASN ASN GLU ASP ASP ASN SEQRES 18 A 1470 ASN GLU ASP ASP ASN ASN GLU ASP ASP ASN ASN GLU ASN SEQRES 19 A 1470 ASP ASN ASN ASN ASN ASN GLU ASP ASP ASN ASN ASN ASP SEQRES 20 A 1470 ASP ASP ASP ASP GLU ASP ASN GLU GLU GLU ASP GLU GLU SEQRES 21 A 1470 LYS GLN LYS SER LEU ARG GLU LYS LEU TYR ARG LYS ILE SEQRES 22 A 1470 TYR GLU MET LEU LYS LYS LYS LYS GLU ASN ILE VAL LEU SEQRES 23 A 1470 ASP GLU ASN ASN PRO ASN VAL ASN PHE THR ASP TYR LYS SEQRES 24 A 1470 ASP ASP VAL PHE TYR PRO TYR GLN TYR ILE PRO PRO MET SEQRES 25 A 1470 LEU ILE LYS ALA ASP ARG CYS LYS LEU GLN ASN VAL PHE SEQRES 26 A 1470 GLY ASP LYS ASN LEU ASN ILE ASP LEU ARG GLU ALA SER SEQRES 27 A 1470 ASP GLY LEU LYS LYS GLN ILE THR TYR THR LEU GLU ASP SEQRES 28 A 1470 ILE CYS GLU LYS LYS TYR GLY ASP CYS ASN PHE SER SER SEQRES 29 A 1470 LEU PHE LEU TYR TYR GLU LYS GLY ASN GLY TYR ILE ASP SEQRES 30 A 1470 TYR PRO ILE LYS VAL ASP ASN LEU ASP PHE TYR VAL ASN SEQRES 31 A 1470 ARG ARG THR TYR LYS GLU MET MET PHE LYS GLY ILE LEU SEQRES 32 A 1470 GLY ASN MET VAL TYR GLU LYS SER GLY SER LYS TYR ILE SEQRES 33 A 1470 ILE LYS SER ALA ASN ALA ILE MET THR VAL ILE PRO LEU SEQRES 34 A 1470 LEU ASN SER HIS THR TYR GLU PRO TYR ALA LEU ALA TYR SEQRES 35 A 1470 GLU LYS LYS LEU ILE ASP TYR VAL ARG PHE TYR ASN LEU SEQRES 36 A 1470 ASP ASP ILE ILE GLN ASP GLU GLU THR ASN ASP ASP ASN SEQRES 37 A 1470 ASP PRO PHE ILE ARG PHE HIS VAL PHE THR ASP ARG SER SEQRES 38 A 1470 LEU GLU ASP GLU VAL ASP ARG ILE SER LYS ILE ASP ASN SEQRES 39 A 1470 LEU THR ARG LEU LEU LEU LEU ILE GLY VAL LEU LEU ILE SEQRES 40 A 1470 PHE MET TYR ALA LEU PHE ASN ASN VAL THR SER VAL LEU SEQRES 41 A 1470 TYR ARG SER LYS PRO LEU CYS ALA VAL MET GLY ILE PHE SEQRES 42 A 1470 CYS GLY PHE LEU GLY PHE LEU SER GLY SER GLY PHE LEU SEQRES 43 A 1470 TYR PHE LEU GLY VAL LYS SER VAL PRO PRO ALA GLU THR SEQRES 44 A 1470 VAL PRO PHE LEU VAL ILE GLY VAL GLY VAL ASP ASP VAL SEQRES 45 A 1470 PHE VAL ILE LEU ASN SER TYR SER LEU LEU PHE MET VAL SEQRES 46 A 1470 LYS ASP ASN LYS LYS ARG ILE GLN MET CYS LEU LYS ASP SEQRES 47 A 1470 SER ALA LEU ALA ILE THR VAL THR THR LEU THR ASN ILE SEQRES 48 A 1470 ILE ALA PHE LEU ILE SER ALA ILE SER PRO PHE TYR SER SEQRES 49 A 1470 ILE CYS ALA PHE SER LEU PHE THR ALA SER SER LEU PHE SEQRES 50 A 1470 PHE GLY TYR LEU MET VAL LEU THR PHE LEU LEU SER PHE SEQRES 51 A 1470 LEU CYS ILE GLU ALA LYS LEU GLU LYS LYS LYS ARG ASN SEQRES 52 A 1470 ILE PHE THR GLY THR PHE HIS LEU PHE ARG SER ILE PHE SEQRES 53 A 1470 MET LYS SER SER LYS LYS ASN LYS LYS GLU ASN LYS GLU SEQRES 54 A 1470 ASN ASN ILE HIS ASP ASP GLY ASP ASN ASP ASN ASP GLU SEQRES 55 A 1470 LYS LYS LYS ASP LEU SER LEU GLU VAL LYS ASN ASN GLU SEQRES 56 A 1470 ASP ASP TYR GLU ASN ILE SER ILE TYR GLU TRP ILE HIS SEQRES 57 A 1470 ASN LEU TYR LEU PHE GLU GLU SER ILE ASN LYS LYS LYS SEQRES 58 A 1470 LYS ASN ALA ALA LEU VAL TYR ALA SER ASN ASN GLY MET SEQRES 59 A 1470 SER SER ASN LEU ASN ASN VAL ASN GLU ASP GLY PHE PRO SEQRES 60 A 1470 ASN PRO SER LYS ILE VAL SER MET GLU ASP VAL LYS LYS SEQRES 61 A 1470 ARG ASN ILE LYS LYS ASP ASP ALA TYR ILE ASN LYS GLU SEQRES 62 A 1470 ASP GLU GLU GLY GLY GLY TYR TYR ASN LYS ASP ASP ASN SEQRES 63 A 1470 LYS LYS LYS ASP ILE LEU GLY LYS LYS GLN LYS LYS ASN SEQRES 64 A 1470 ASN ASN ASN VAL THR LEU VAL SER LYS LYS GLY GLU ASP SEQRES 65 A 1470 ASN GLU LEU ASP VAL TYR TYR GLU ASN LEU ASP GLU LYS SEQRES 66 A 1470 THR ASN ASP LYS TYR LYS MET ASN ASN ILE LYS SER SER SEQRES 67 A 1470 LYS LEU LYS TYR ASP ASN ASP LYS LYS ASP GLY ALA ILE SEQRES 68 A 1470 ILE ASN ASN ARG PRO SER SER ASP GLU GLU TYR LYS GLU SEQRES 69 A 1470 GLU LYS ASP LYS ASN LYS ILE ASN ILE LEU ASN ASP VAL SEQRES 70 A 1470 PHE ASN ASP ILE THR ILE LYS PRO ASN GLU ASN ILE LEU SEQRES 71 A 1470 LEU ASP ARG GLY ASP VAL ILE LYS SER SER GLY TYR ASP SEQRES 72 A 1470 SER SER TYR ASN ASP LEU GLN SER SER SER LEU PRO ASN SEQRES 73 A 1470 PRO SER SER ASN GLU VAL LEU ASN LYS THR THR MET VAL SEQRES 74 A 1470 TYR ASN GLU THR ASP LEU LYS ASP ASN LYS LYS GLU ILE SEQRES 75 A 1470 LYS SER SER LYS LYS ASN VAL LYS ASP ILE LYS LYS SER SEQRES 76 A 1470 ASP MET ILE HIS ASP ASP THR TYR ASP ILE ILE ASN SER SEQRES 77 A 1470 ASN ASN LYS ASN ILE LEU LEU SER SER ASN GLU ILE ASN SEQRES 78 A 1470 ASN ASN SER ASN ASN THR ASN LYS PHE ASN ASN ASN SER SEQRES 79 A 1470 THR GLU LEU ALA THR LYS ASP THR GLN GLN PHE ILE ASN SEQRES 80 A 1470 GLY HIS ASP LYS ASN ILE TYR LEU LEU SER SER HIS ASP SEQRES 81 A 1470 ASN ALA LEU PHE TYR LYS TYR ILE TYR GLU GLU PRO LYS SEQRES 82 A 1470 GLY ASN ILE GLY LYS TYR PHE ARG SER LEU VAL LYS ASN SEQRES 83 A 1470 TYR TYR VAL PRO PHE LEU SER SER ARG PHE GLY LYS THR SEQRES 84 A 1470 ILE VAL TYR ILE MET PHE THR ILE ILE ILE ALA MET SER SEQRES 85 A 1470 ILE TYR GLY CYS THR LEU MET LYS LYS GLY ILE LYS TYR SEQRES 86 A 1470 ASP LYS ALA PHE PRO VAL ASP SER TYR VAL ARG ARG PHE SEQRES 87 A 1470 THR THR ALA LYS ILE LYS TYR PHE PRO ASP PHE GLY ASP SEQRES 88 A 1470 PHE ILE GLU VAL TYR TYR PHE ASP LYS HIS PHE ILE ASN SEQRES 89 A 1470 LYS TYR ARG GLY LEU GLU LYS ASN THR LYS GLU ALA ALA SEQRES 90 A 1470 SER SER PHE LEU TYR SER ASP LEU THR ASP ARG GLN ILE SEQRES 91 A 1470 MET ASN SER PRO LYS ILE ASN LYS ASN VAL HIS TRP GLU SEQRES 92 A 1470 ASN THR ASN LEU GLN GLU GLU LEU ILE ASN MET HIS ASN SEQRES 93 A 1470 THR LEU GLU SER GLN GLU PHE VAL THR SER VAL ALA ASN SEQRES 94 A 1470 GLY PHE THR PHE PHE LEU ASN LYS ASN LYS SER SER LEU SEQRES 95 A 1470 ARG LYS GLU ASN PRO GLN GLU PHE TYR GLU ILE PHE ALA SEQRES 96 A 1470 ASN TRP LEU LYS LYS ASP PHE VAL GLY ASN LEU PHE LYS SEQRES 97 A 1470 ASN ASP PHE VAL PHE LEU ASN GLY LYS LEU VAL ALA TRP SEQRES 98 A 1470 ARG PHE HIS TYR PHE GLN LYS ASN VAL ASP ASP SER GLU SEQRES 99 A 1470 ILE SER SER LYS TRP LEU LYS ALA CYS LYS GLN ILE THR SEQRES 100 A 1470 LYS LEU GLU ASN HIS ASN VAL GLN MET VAL CYS PHE HIS SEQRES 101 A 1470 LEU SER SER ILE PHE ASN GLU THR ASP GLU SER ILE ILE SEQRES 102 A 1470 GLU VAL THR LEU ILE ASN LEU GLY ILE THR ILE LEU THR SEQRES 103 A 1470 ILE LEU VAL VAL THR ALA TYR ILE ILE LYS GLY PHE TYR SEQRES 104 A 1470 SER CYS VAL ILE ILE ALA LEU ILE ILE PHE LEU ILE ASP SEQRES 105 A 1470 LEU CYS ILE PHE GLY PHE MET CYS LEU CYS GLY ILE THR SEQRES 106 A 1470 MET ASN ILE ILE SER MET VAL ILE LEU VAL LEU SER VAL SEQRES 107 A 1470 GLY PHE SER ILE ASP HIS THR SER HIS ILE VAL GLN ALA SEQRES 108 A 1470 PHE SER HIS SER MET GLY ARG THR ARG ASP GLU LYS MET SEQRES 109 A 1470 LYS GLU SER LEU HIS LEU MET ILE GLY PRO VAL LEU HIS SEQRES 110 A 1470 SER GLY LEU SER THR TRP PHE VAL ILE SER THR LEU PHE SEQRES 111 A 1470 PHE SER ASN LYS ASP PHE THR VAL ILE PHE PHE GLN THR SEQRES 112 A 1470 LEU SER LEU VAL LEU PHE PHE SER ILE THR PHE SER SER SEQRES 113 A 1470 MET PHE LEU PRO VAL LEU LEU SER SER PHE GLY PRO LEU SEQRES 114 A 1470 HIS HET NAG A1501 14 HET CLR A1502 28 HET Y6F A1503 28 HET NAG A1504 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CLR CHOLESTEROL HETNAM Y6F MMV009108 HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN Y6F 4-[2-(3,4-DIMETHYLANILINO)-1,3-THIAZOL-4-YL]-N,N- HETSYN 2 Y6F DIETHYLBENZENE-1-SULFONAMIDE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 CLR C27 H46 O FORMUL 4 Y6F C21 H25 N3 O2 S2 HELIX 1 AA1 ASN A 5 ARG A 35 1 31 HELIX 2 AA2 ARG A 35 CYS A 52 1 18 HELIX 3 AA3 GLY A 53 LYS A 57 5 5 HELIX 4 AA4 ASP A 62 SER A 68 1 7 HELIX 5 AA5 SER A 72 PHE A 85 1 14 HELIX 6 AA6 LYS A 103 ASP A 119 1 17 HELIX 7 AA7 SER A 125 ILE A 127 5 3 HELIX 8 AA8 SER A 141 GLY A 162 1 22 HELIX 9 AA9 ASN A 294 LYS A 299 1 6 HELIX 10 AB1 PRO A 310 ILE A 314 5 5 HELIX 11 AB2 LYS A 320 PHE A 325 1 6 HELIX 12 AB3 ASP A 333 ALA A 337 5 5 HELIX 13 AB4 SER A 338 ILE A 345 1 8 HELIX 14 AB5 GLU A 350 ILE A 352 5 3 HELIX 15 AB6 SER A 364 TYR A 368 5 5 HELIX 16 AB7 TYR A 369 ASN A 373 5 5 HELIX 17 AB8 MET A 398 LEU A 403 1 6 HELIX 18 AB9 TYR A 435 ARG A 451 1 17 HELIX 19 AC1 LEU A 455 GLN A 460 1 6 HELIX 20 AC2 THR A 478 LYS A 491 1 14 HELIX 21 AC3 ASP A 493 VAL A 516 1 24 HELIX 22 AC4 LYS A 524 GLY A 550 1 27 HELIX 23 AC5 VAL A 554 GLU A 558 5 5 HELIX 24 AC6 THR A 559 VAL A 569 1 11 HELIX 25 AC7 VAL A 569 LEU A 582 1 14 HELIX 26 AC8 ASP A 587 ALA A 618 1 32 HELIX 27 AC9 PHE A 622 LYS A 660 1 39 HELIX 28 AD1 ASN A 663 SER A 674 1 12 HELIX 29 AD2 SER A 722 GLU A 735 1 14 HELIX 30 AD3 GLY A 1057 TYR A 1067 1 11 HELIX 31 AD4 TYR A 1067 SER A 1074 1 8 HELIX 32 AD5 SER A 1074 LEU A 1098 1 25 HELIX 33 AD6 LYS A 1104 PHE A 1109 5 6 HELIX 34 AD7 SER A 1113 PHE A 1126 1 14 HELIX 35 AD8 ASP A 1139 GLY A 1148 1 10 HELIX 36 AD9 GLN A 1169 SER A 1173 5 5 HELIX 37 AE1 ASN A 1184 GLN A 1201 1 18 HELIX 38 AE2 ASN A 1209 ASN A 1218 1 10 HELIX 39 AE3 SER A 1220 GLU A 1225 5 6 HELIX 40 AE4 ASN A 1226 ASP A 1241 1 16 HELIX 41 AE5 ASP A 1241 LYS A 1248 1 8 HELIX 42 AE6 ASP A 1272 LYS A 1288 1 17 HELIX 43 AE7 LEU A 1289 ASN A 1293 5 5 HELIX 44 AE8 LEU A 1301 TYR A 1333 1 33 HELIX 45 AE9 PHE A 1338 CYS A 1362 1 25 HELIX 46 AF1 ASN A 1367 SER A 1395 1 29 HELIX 47 AF2 THR A 1399 SER A 1427 1 29 HELIX 48 AF3 THR A 1428 SER A 1432 5 5 HELIX 49 AF4 LYS A 1434 MET A 1457 1 24 HELIX 50 AF5 MET A 1457 GLY A 1467 1 11 SHEET 1 AA1 3 ALA A 422 LEU A 430 0 SHEET 2 AA1 3 SER A 88 SER A 97 -1 N ARG A 89 O LEU A 429 SHEET 3 AA1 3 ILE A 472 PHE A 477 -1 O HIS A 475 N LEU A 94 SHEET 1 AA2 2 GLU A 121 ASP A 123 0 SHEET 2 AA2 2 THR A 346 THR A 348 -1 O TYR A 347 N VAL A 122 SHEET 1 AA3 4 PHE A 303 TYR A 304 0 SHEET 2 AA3 4 PHE A1251 LEU A1254 -1 O PHE A1253 N TYR A 304 SHEET 3 AA3 4 LYS A1257 GLN A1267 -1 O LYS A1257 N LEU A1254 SHEET 4 AA3 4 VAL A1204 ALA A1208 -1 N ALA A1208 O HIS A1264 SHEET 1 AA4 5 PHE A 303 TYR A 304 0 SHEET 2 AA4 5 PHE A1251 LEU A1254 -1 O PHE A1253 N TYR A 304 SHEET 3 AA4 5 LYS A1257 GLN A1267 -1 O LYS A1257 N LEU A1254 SHEET 4 AA4 5 ASP A1131 PHE A1138 -1 N TYR A1137 O TRP A1261 SHEET 5 AA4 5 VAL A1297 PHE A1299 -1 O VAL A1297 N TYR A1136 SHEET 1 AA5 2 LYS A 355 LYS A 356 0 SHEET 2 AA5 2 ASP A 359 CYS A 360 -1 O ASP A 359 N LYS A 356 SHEET 1 AA6 3 ILE A 380 VAL A 382 0 SHEET 2 AA6 3 TYR A 415 SER A 419 -1 O TYR A 415 N VAL A 382 SHEET 3 AA6 3 VAL A 407 TYR A 408 -1 N VAL A 407 O SER A 419 SHEET 1 AA7 2 TYR A 388 VAL A 389 0 SHEET 2 AA7 2 GLU A 396 MET A 397 -1 O MET A 397 N TYR A 388 LINK ND2 ASN A 165 C1 NAG A1501 1555 1555 1.44 LINK ND2 ASN A 294 C1 NAG A1504 1555 1555 1.44 CISPEP 1 TYR A 304 PRO A 305 0 2.26 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000