data_8V1H # _entry.id 8V1H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8V1H pdb_00008v1h 10.2210/pdb8v1h/pdb WWPDB D_1000279347 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-10 2 'Structure model' 1 1 2024-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8V1H _pdbx_database_status.recvd_initial_deposition_date 2023-11-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jinwei.zhang@nih.gov _pdbx_contact_author.name_first Jinwei _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2114-173X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Skeparnias, I.' 1 ? 'Zhang, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural basis of MALAT1 RNA maturation and mascRNA biogenesis.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-024-01340-4 _citation.pdbx_database_id_PubMed 38956168 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Skeparnias, I.' 1 ? primary 'Bou-Nader, C.' 2 ? primary 'Anastasakis, D.G.' 3 ? primary 'Fan, L.' 4 ? primary 'Wang, Y.X.' 5 ? primary 'Hafner, M.' 6 ? primary 'Zhang, J.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man pre-mascRNA 24332.246 1 ? ? ? ? 2 non-polymer nat 'SODIUM ION' 22.990 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(GTP)GCCCGGACGAUGCUGGUGGUUGGCACUCCUGGUUUCCAGGACGGGGUUCAAAUCCCUGCGGCGUCGUCCGGGCC' _entity_poly.pdbx_seq_one_letter_code_can GGCCCGGACGAUGCUGGUGGUUGGCACUCCUGGUUUCCAGGACGGGGUUCAAAUCCCUGCGGCGUCGUCCGGGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'SODIUM ION' _pdbx_entity_nonpoly.comp_id NA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 C n 1 5 C n 1 6 G n 1 7 G n 1 8 A n 1 9 C n 1 10 G n 1 11 A n 1 12 U n 1 13 G n 1 14 C n 1 15 U n 1 16 G n 1 17 G n 1 18 U n 1 19 G n 1 20 G n 1 21 U n 1 22 U n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 C n 1 28 U n 1 29 C n 1 30 C n 1 31 U n 1 32 G n 1 33 G n 1 34 U n 1 35 U n 1 36 U n 1 37 C n 1 38 C n 1 39 A n 1 40 G n 1 41 G n 1 42 A n 1 43 C n 1 44 G n 1 45 G n 1 46 G n 1 47 G n 1 48 U n 1 49 U n 1 50 C n 1 51 A n 1 52 A n 1 53 A n 1 54 U n 1 55 C n 1 56 C n 1 57 C n 1 58 U n 1 59 G n 1 60 C n 1 61 G n 1 62 G n 1 63 C n 1 64 G n 1 65 U n 1 66 C n 1 67 G n 1 68 U n 1 69 C n 1 70 C n 1 71 G n 1 72 G n 1 73 G n 1 74 C n 1 75 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 75 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 -8 -8 GTP GTP A . n A 1 2 G 2 -7 -7 G G A . n A 1 3 C 3 -6 -6 C C A . n A 1 4 C 4 -5 -5 C C A . n A 1 5 C 5 -4 -4 C C A . n A 1 6 G 6 -3 -3 G G A . n A 1 7 G 7 -2 -2 G G A . n A 1 8 A 8 -1 -1 A A A . n A 1 9 C 9 0 0 C C A . n A 1 10 G 10 1 1 G G A . n A 1 11 A 11 2 2 A A A . n A 1 12 U 12 3 3 U U A . n A 1 13 G 13 4 4 G G A . n A 1 14 C 14 5 5 C C A . n A 1 15 U 15 6 6 U U A . n A 1 16 G 16 7 7 G G A . n A 1 17 G 17 8 8 G G A . n A 1 18 U 18 9 9 U U A . n A 1 19 G 19 10 10 G G A . n A 1 20 G 20 11 11 G G A . n A 1 21 U 21 12 12 U U A . n A 1 22 U 22 13 13 U U A . n A 1 23 G 23 14 14 G G A . n A 1 24 G 24 15 15 G G A . n A 1 25 C 25 16 16 C C A . n A 1 26 A 26 17 17 A A A . n A 1 27 C 27 18 18 C C A . n A 1 28 U 28 19 19 U U A . n A 1 29 C 29 20 20 C C A . n A 1 30 C 30 21 21 C C A . n A 1 31 U 31 22 22 U U A . n A 1 32 G 32 23 23 G G A . n A 1 33 G 33 24 24 G G A . n A 1 34 U 34 25 ? ? ? A . n A 1 35 U 35 26 ? ? ? A . n A 1 36 U 36 27 ? ? ? A . n A 1 37 C 37 28 28 C C A . n A 1 38 C 38 29 29 C C A . n A 1 39 A 39 30 30 A A A . n A 1 40 G 40 31 31 G G A . n A 1 41 G 41 32 32 G G A . n A 1 42 A 42 33 33 A A A . n A 1 43 C 43 34 34 C C A . n A 1 44 G 44 35 35 G G A . n A 1 45 G 45 36 36 G G A . n A 1 46 G 46 37 37 G G A . n A 1 47 G 47 38 38 G G A . n A 1 48 U 48 39 39 U U A . n A 1 49 U 49 40 40 U U A . n A 1 50 C 50 41 41 C C A . n A 1 51 A 51 42 42 A A A . n A 1 52 A 52 43 43 A A A . n A 1 53 A 53 44 44 A A A . n A 1 54 U 54 45 45 U U A . n A 1 55 C 55 46 46 C C A . n A 1 56 C 56 47 47 C C A . n A 1 57 C 57 48 48 C C A . n A 1 58 U 58 49 49 U U A . n A 1 59 G 59 50 50 G G A . n A 1 60 C 60 51 51 C C A . n A 1 61 G 61 52 52 G G A . n A 1 62 G 62 53 53 G G A . n A 1 63 C 63 54 54 C C A . n A 1 64 G 64 55 55 G G A . n A 1 65 U 65 56 56 U U A . n A 1 66 C 66 57 57 C C A . n A 1 67 G 67 58 58 G G A . n A 1 68 U 68 59 59 U U A . n A 1 69 C 69 60 60 C C A . n A 1 70 C 70 61 61 C C A . n A 1 71 G 71 62 62 G G A . n A 1 72 G 72 63 63 G G A . n A 1 73 G 73 64 64 G G A . n A 1 74 C 74 65 65 C C A . n A 1 75 C 75 66 66 C C A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id NA _pdbx_nonpoly_scheme.auth_mon_id NA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 13 ? N1 ? A U 22 N1 2 1 Y 1 A U 13 ? C2 ? A U 22 C2 3 1 Y 1 A U 13 ? O2 ? A U 22 O2 4 1 Y 1 A U 13 ? N3 ? A U 22 N3 5 1 Y 1 A U 13 ? C4 ? A U 22 C4 6 1 Y 1 A U 13 ? O4 ? A U 22 O4 7 1 Y 1 A U 13 ? C5 ? A U 22 C5 8 1 Y 1 A U 13 ? C6 ? A U 22 C6 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.19.2_4158: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 96.99 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8V1H _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.986 _cell.length_a_esd ? _cell.length_b 40.651 _cell.length_b_esd ? _cell.length_c 123.393 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8V1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8V1H _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M sodium chloride, 0.1 M lithium chloride, 0.01 M magnesium chloride hexahydrate, 0.05 M MES (pH 6.5) and 35% MPD' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-29 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator M _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8V1H _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 40.83 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5028 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.26 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 491 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.99 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8V1H _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.89 _refine.ls_d_res_low 40.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4832 _refine.ls_number_reflns_R_free 255 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.66 _refine.ls_percent_reflns_R_free 5.27 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2004 _refine.ls_R_factor_R_free 0.2459 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1975 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.97 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.30 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.26 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.89 _refine_hist.d_res_low 40.83 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1542 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1541 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 ? 1717 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.062 ? 2675 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.008 ? 868 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.043 ? 360 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 72 ? f_plane_restr ? ? # _struct.entry_id 8V1H _struct.title 'Crystal structure of human pre-mascRNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8V1H _struct_keywords.text 'non-coding RNAs, cancer, RNA, mascRNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8V1H _struct_ref.pdbx_db_accession 8V1H _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8V1H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 75 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8V1H _struct_ref_seq.db_align_beg -8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 66 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -8 _struct_ref_seq.pdbx_auth_seq_align_end 66 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GTP -8 A G -7 1_555 ? ? ? ? ? ? ? 1.621 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 75 N3 ? ? A GTP -8 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 75 O2 ? ? A GTP -8 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 75 N4 ? ? A GTP -8 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 74 N3 ? ? A G -7 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 74 O2 ? ? A G -7 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 74 N4 ? ? A G -7 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 73 N1 ? ? A C -6 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 73 O6 ? ? A C -6 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 73 N2 ? ? A C -6 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 72 N1 ? ? A C -5 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 72 O6 ? ? A C -5 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 72 N2 ? ? A C -5 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 71 N1 ? ? A C -4 A G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 71 O6 ? ? A C -4 A G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 71 N2 ? ? A C -4 A G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 70 N3 ? ? A G -3 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 70 O2 ? ? A G -3 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 70 N4 ? ? A G -3 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 69 N3 ? ? A G -2 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 69 O2 ? ? A G -2 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 69 N4 ? ? A G -2 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 68 N3 ? ? A A -1 A U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 68 O4 ? ? A A -1 A U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 67 N1 ? ? A C 0 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 67 O6 ? ? A C 0 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 67 N2 ? ? A C 0 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 66 N3 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 66 O2 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 66 N4 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 11 N1 ? ? ? 1_555 A U 65 N3 ? ? A A 2 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 11 N6 ? ? ? 1_555 A U 65 O4 ? ? A A 2 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 12 N3 ? ? ? 1_555 A G 64 O6 ? ? A U 3 A G 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog33 hydrog ? ? A U 12 O2 ? ? ? 1_555 A G 64 N1 ? ? A U 3 A G 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog34 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 63 N3 ? ? A G 4 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 63 O2 ? ? A G 4 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 63 N4 ? ? A G 4 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 62 N1 ? ? A C 5 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 62 O6 ? ? A C 5 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 62 N2 ? ? A C 5 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 15 N3 ? ? ? 1_555 A G 61 O6 ? ? A U 6 A G 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog41 hydrog ? ? A U 15 O2 ? ? ? 1_555 A G 61 N1 ? ? A U 6 A G 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog42 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 60 N3 ? ? A G 7 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 60 O2 ? ? A G 7 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 60 N4 ? ? A G 7 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 27 N3 ? ? A G 8 A C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 27 O2 ? ? A G 8 A C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 27 N4 ? ? A G 8 A C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 26 N1 ? ? A U 9 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 26 N6 ? ? A U 9 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 25 N3 ? ? A G 10 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 25 O2 ? ? A G 10 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 25 N4 ? ? A G 10 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A U 21 N3 ? ? ? 1_555 A U 54 O2 ? ? A U 12 A U 45 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog54 hydrog ? ? A G 23 N1 ? ? ? 1_555 A U 49 O2 ? ? A G 14 A U 40 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog55 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 50 N3 ? ? A G 15 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 50 O2 ? ? A G 15 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 50 N4 ? ? A G 15 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 42 N1 ? ? A U 19 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 28 O4 ? ? ? 1_555 A A 42 N6 ? ? A U 19 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 41 N1 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 41 O6 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 41 N2 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 39 N1 ? ? A U 22 A A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 39 N6 ? ? A U 22 A A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 38 N3 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 38 O2 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 38 N4 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 37 N3 ? ? A G 24 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 37 O2 ? ? A G 24 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 37 N4 ? ? A G 24 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 44 N1 ? ? ? 1_555 A U 58 O2 ? ? A G 35 A U 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? A G 44 O6 ? ? ? 1_555 A U 58 N3 ? ? A G 35 A U 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 36 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 36 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 36 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 46 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 37 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 46 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 37 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 46 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 37 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 47 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 38 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 47 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 38 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 47 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 38 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A U 48 N3 ? ? ? 1_555 A A 52 N7 ? ? A U 39 A A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog89 hydrog ? ? A U 48 O2 ? ? ? 1_555 A A 52 N6 ? ? A U 39 A A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -0.5873 _pdbx_refine_tls.origin_y 6.2369 _pdbx_refine_tls.origin_z 33.2639 _pdbx_refine_tls.T[1][1] 0.4735 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.2042 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.1909 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.9174 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.1045 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.7728 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.7894 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.7525 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0495 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.3389 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0587 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.7560 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.2679 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.7433 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.3500 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0023 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0918 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0150 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0737 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.1626 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.2403 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_entry_details.entry_id 8V1H _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A U 25 ? A U 34 2 1 Y 1 A U 26 ? A U 35 3 1 Y 1 A U 27 ? A U 36 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GTP PG P N N 111 GTP O1G O N N 112 GTP O2G O N N 113 GTP O3G O N N 114 GTP O3B O N N 115 GTP PB P N N 116 GTP O1B O N N 117 GTP O2B O N N 118 GTP O3A O N N 119 GTP PA P N N 120 GTP O1A O N N 121 GTP O2A O N N 122 GTP "O5'" O N N 123 GTP "C5'" C N N 124 GTP "C4'" C N R 125 GTP "O4'" O N N 126 GTP "C3'" C N S 127 GTP "O3'" O N N 128 GTP "C2'" C N R 129 GTP "O2'" O N N 130 GTP "C1'" C N R 131 GTP N9 N Y N 132 GTP C8 C Y N 133 GTP N7 N Y N 134 GTP C5 C Y N 135 GTP C6 C N N 136 GTP O6 O N N 137 GTP N1 N N N 138 GTP C2 C N N 139 GTP N2 N N N 140 GTP N3 N N N 141 GTP C4 C Y N 142 GTP HOG2 H N N 143 GTP HOG3 H N N 144 GTP HOB2 H N N 145 GTP HOA2 H N N 146 GTP "H5'" H N N 147 GTP "H5''" H N N 148 GTP "H4'" H N N 149 GTP "H3'" H N N 150 GTP "HO3'" H N N 151 GTP "H2'" H N N 152 GTP "HO2'" H N N 153 GTP "H1'" H N N 154 GTP H8 H N N 155 GTP HN1 H N N 156 GTP HN21 H N N 157 GTP HN22 H N N 158 NA NA NA N N 159 U OP3 O N N 160 U P P N N 161 U OP1 O N N 162 U OP2 O N N 163 U "O5'" O N N 164 U "C5'" C N N 165 U "C4'" C N R 166 U "O4'" O N N 167 U "C3'" C N S 168 U "O3'" O N N 169 U "C2'" C N R 170 U "O2'" O N N 171 U "C1'" C N R 172 U N1 N N N 173 U C2 C N N 174 U O2 O N N 175 U N3 N N N 176 U C4 C N N 177 U O4 O N N 178 U C5 C N N 179 U C6 C N N 180 U HOP3 H N N 181 U HOP2 H N N 182 U "H5'" H N N 183 U "H5''" H N N 184 U "H4'" H N N 185 U "H3'" H N N 186 U "HO3'" H N N 187 U "H2'" H N N 188 U "HO2'" H N N 189 U "H1'" H N N 190 U H3 H N N 191 U H5 H N N 192 U H6 H N N 193 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GTP PG O1G doub N N 116 GTP PG O2G sing N N 117 GTP PG O3G sing N N 118 GTP PG O3B sing N N 119 GTP O2G HOG2 sing N N 120 GTP O3G HOG3 sing N N 121 GTP O3B PB sing N N 122 GTP PB O1B doub N N 123 GTP PB O2B sing N N 124 GTP PB O3A sing N N 125 GTP O2B HOB2 sing N N 126 GTP O3A PA sing N N 127 GTP PA O1A doub N N 128 GTP PA O2A sing N N 129 GTP PA "O5'" sing N N 130 GTP O2A HOA2 sing N N 131 GTP "O5'" "C5'" sing N N 132 GTP "C5'" "C4'" sing N N 133 GTP "C5'" "H5'" sing N N 134 GTP "C5'" "H5''" sing N N 135 GTP "C4'" "O4'" sing N N 136 GTP "C4'" "C3'" sing N N 137 GTP "C4'" "H4'" sing N N 138 GTP "O4'" "C1'" sing N N 139 GTP "C3'" "O3'" sing N N 140 GTP "C3'" "C2'" sing N N 141 GTP "C3'" "H3'" sing N N 142 GTP "O3'" "HO3'" sing N N 143 GTP "C2'" "O2'" sing N N 144 GTP "C2'" "C1'" sing N N 145 GTP "C2'" "H2'" sing N N 146 GTP "O2'" "HO2'" sing N N 147 GTP "C1'" N9 sing N N 148 GTP "C1'" "H1'" sing N N 149 GTP N9 C8 sing Y N 150 GTP N9 C4 sing Y N 151 GTP C8 N7 doub Y N 152 GTP C8 H8 sing N N 153 GTP N7 C5 sing Y N 154 GTP C5 C6 sing N N 155 GTP C5 C4 doub Y N 156 GTP C6 O6 doub N N 157 GTP C6 N1 sing N N 158 GTP N1 C2 sing N N 159 GTP N1 HN1 sing N N 160 GTP C2 N2 sing N N 161 GTP C2 N3 doub N N 162 GTP N2 HN21 sing N N 163 GTP N2 HN22 sing N N 164 GTP N3 C4 sing N N 165 U OP3 P sing N N 166 U OP3 HOP3 sing N N 167 U P OP1 doub N N 168 U P OP2 sing N N 169 U P "O5'" sing N N 170 U OP2 HOP2 sing N N 171 U "O5'" "C5'" sing N N 172 U "C5'" "C4'" sing N N 173 U "C5'" "H5'" sing N N 174 U "C5'" "H5''" sing N N 175 U "C4'" "O4'" sing N N 176 U "C4'" "C3'" sing N N 177 U "C4'" "H4'" sing N N 178 U "O4'" "C1'" sing N N 179 U "C3'" "O3'" sing N N 180 U "C3'" "C2'" sing N N 181 U "C3'" "H3'" sing N N 182 U "O3'" "HO3'" sing N N 183 U "C2'" "O2'" sing N N 184 U "C2'" "C1'" sing N N 185 U "C2'" "H2'" sing N N 186 U "O2'" "HO2'" sing N N 187 U "C1'" N1 sing N N 188 U "C1'" "H1'" sing N N 189 U N1 C2 sing N N 190 U N1 C6 sing N N 191 U C2 O2 doub N N 192 U C2 N3 sing N N 193 U N3 C4 sing N N 194 U N3 H3 sing N N 195 U C4 O4 doub N N 196 U C4 C5 sing N N 197 U C5 C6 doub N N 198 U C5 H5 sing N N 199 U C6 H6 sing N N 200 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8V1H 'double helix' 8V1H 'a-form double helix' 8V1H 'parallel strands' 8V1H 'bulge loop' 8V1H 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A C 75 1_555 -1.182 0.379 -0.005 -4.815 -17.096 0.065 1 A_GTP-8:C66_A A -8 ? A 66 ? 19 1 1 A G 2 1_555 A C 74 1_555 -0.141 -0.064 -0.349 -6.861 -9.690 1.256 2 A_G-7:C65_A A -7 ? A 65 ? 19 1 1 A C 3 1_555 A G 73 1_555 0.039 -0.139 -0.115 0.253 -9.857 0.987 3 A_C-6:G64_A A -6 ? A 64 ? 19 1 1 A C 4 1_555 A G 72 1_555 0.263 -0.050 0.055 -0.542 -7.674 0.491 4 A_C-5:G63_A A -5 ? A 63 ? 19 1 1 A C 5 1_555 A G 71 1_555 0.178 -0.148 0.317 -3.161 -3.197 1.787 5 A_C-4:G62_A A -4 ? A 62 ? 19 1 1 A G 6 1_555 A C 70 1_555 -0.155 -0.287 0.467 1.869 -8.033 -2.301 6 A_G-3:C61_A A -3 ? A 61 ? 19 1 1 A G 7 1_555 A C 69 1_555 -0.220 -0.171 -0.341 -7.137 -1.561 -1.363 7 A_G-2:C60_A A -2 ? A 60 ? 19 1 1 A A 8 1_555 A U 68 1_555 0.054 -0.013 -0.022 3.101 -8.403 -1.754 8 A_A-1:U59_A A -1 ? A 59 ? 20 1 1 A C 9 1_555 A G 67 1_555 0.247 -0.038 0.057 1.359 -10.307 2.045 9 A_C0:G58_A A 0 ? A 58 ? 19 1 1 A G 10 1_555 A C 66 1_555 -0.109 -0.126 0.224 -4.765 -5.944 -0.534 10 A_G1:C57_A A 1 ? A 57 ? 19 1 1 A A 11 1_555 A U 65 1_555 -0.006 -0.158 0.138 -0.444 -7.429 -2.340 11 A_A2:U56_A A 2 ? A 56 ? 20 1 1 A U 12 1_555 A G 64 1_555 1.986 -0.323 0.058 0.155 -9.460 1.440 12 A_U3:G55_A A 3 ? A 55 ? 28 1 1 A G 13 1_555 A C 63 1_555 -0.006 -0.044 0.115 -3.476 -8.243 -3.057 13 A_G4:C54_A A 4 ? A 54 ? 19 1 1 A C 14 1_555 A G 62 1_555 0.253 -0.079 0.309 -2.082 -6.353 2.143 14 A_C5:G53_A A 5 ? A 53 ? 19 1 1 A U 15 1_555 A G 61 1_555 2.617 -0.539 0.387 -4.365 -10.458 2.667 15 A_U6:G52_A A 6 ? A 52 ? 28 1 1 A G 16 1_555 A C 60 1_555 -0.115 -0.062 0.171 6.231 2.993 -2.795 16 A_G7:C51_A A 7 ? A 51 ? 19 1 1 A C 43 1_555 A G 59 1_555 0.133 -0.103 -0.192 3.618 -1.413 -1.187 17 A_C34:G50_A A 34 ? A 50 ? 19 1 1 A G 44 1_555 A U 58 1_555 -2.046 -0.482 -0.619 -7.735 -8.436 -7.257 18 A_G35:U49_A A 35 ? A 49 ? 28 1 1 A G 45 1_555 A C 57 1_555 -0.186 -0.008 -0.403 -4.591 3.381 0.500 19 A_G36:C48_A A 36 ? A 48 ? 19 1 1 A G 46 1_555 A C 56 1_555 0.026 -0.016 -0.181 -2.659 -3.417 -0.556 20 A_G37:C47_A A 37 ? A 47 ? 19 1 1 A G 47 1_555 A C 55 1_555 -0.242 -0.035 -0.448 -19.556 -4.624 2.233 21 A_G38:C46_A A 38 ? A 46 ? 19 1 1 A U 48 1_555 A A 52 1_555 4.540 -1.614 0.587 -3.047 19.780 -104.849 22 A_U39:A43_A A 39 ? A 43 ? 24 4 1 A U 49 1_555 A G 23 1_555 0.442 -5.507 0.109 22.902 14.659 -100.800 23 A_U40:G14_A A 40 ? A 14 ? ? 6 1 A C 37 1_555 A G 33 1_555 0.292 -0.252 -0.579 -6.972 -6.729 6.684 24 A_C28:G24_A A 28 ? A 24 ? 19 1 1 A C 38 1_555 A G 32 1_555 0.192 -0.207 -0.413 -1.534 -2.121 -4.134 25 A_C29:G23_A A 29 ? A 23 ? 19 1 1 A A 39 1_555 A U 31 1_555 0.018 -0.043 0.513 5.579 -4.891 -0.224 26 A_A30:U22_A A 30 ? A 22 ? 20 1 1 A G 40 1_555 A C 30 1_555 -0.077 -0.080 0.252 3.046 -8.914 -2.941 27 A_G31:C21_A A 31 ? A 21 ? 19 1 1 A G 41 1_555 A C 29 1_555 -0.122 -0.165 0.475 -3.556 -9.655 -0.726 28 A_G32:C20_A A 32 ? A 20 ? 19 1 1 A A 42 1_555 A U 28 1_555 -0.098 -0.010 0.295 -5.786 -10.145 -3.322 29 A_A33:U19_A A 33 ? A 19 ? 20 1 1 A G 17 1_555 A C 27 1_555 -0.173 -0.130 -0.020 -7.136 -3.658 0.289 30 A_G8:C18_A A 8 ? A 18 ? 19 1 1 A U 18 1_555 A A 26 1_555 -0.169 -0.105 0.248 -3.737 0.665 -2.954 31 A_U9:A17_A A 9 ? A 17 ? 20 1 1 A G 19 1_555 A C 25 1_555 -0.094 -0.083 -0.101 -2.879 2.055 1.118 32 A_G10:C16_A A 10 ? A 16 ? 19 1 1 A U 21 1_555 A U 54 1_555 0.830 3.964 0.363 -34.811 6.300 135.649 33 A_U12:U45_A A 12 ? A 45 ? ? ? 1 A G 24 1_555 A C 50 1_555 -0.185 -0.009 -0.235 -16.652 -12.016 0.334 34 A_G15:C41_A A 15 ? A 41 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A C 75 1_555 A G 2 1_555 A C 74 1_555 -0.365 -1.735 3.470 -0.040 5.318 36.672 -3.462 0.570 3.196 8.398 0.062 37.043 1 AA_GTP-8G-7:C65C66_AA A -8 ? A 66 ? A -7 ? A 65 ? 1 A G 2 1_555 A C 74 1_555 A C 3 1_555 A G 73 1_555 0.287 -1.317 3.118 -2.300 5.175 31.196 -3.286 -0.914 2.841 9.524 4.233 31.693 2 AA_G-7C-6:G64C65_AA A -7 ? A 65 ? A -6 ? A 64 ? 1 A C 3 1_555 A G 73 1_555 A C 4 1_555 A G 72 1_555 -0.657 -1.722 3.278 -3.551 11.321 31.003 -4.780 0.599 2.566 20.272 6.358 33.143 3 AA_C-6C-5:G63G64_AA A -6 ? A 64 ? A -5 ? A 63 ? 1 A C 4 1_555 A G 72 1_555 A C 5 1_555 A G 71 1_555 -0.057 -1.527 3.375 -2.824 8.348 30.627 -4.266 -0.397 2.863 15.407 5.212 31.841 4 AA_C-5C-4:G62G63_AA A -5 ? A 63 ? A -4 ? A 62 ? 1 A C 5 1_555 A G 71 1_555 A G 6 1_555 A C 70 1_555 0.120 -1.491 2.795 -0.458 13.567 33.538 -3.884 -0.244 2.056 22.404 0.757 36.108 5 AA_C-4G-3:C61G62_AA A -4 ? A 62 ? A -3 ? A 61 ? 1 A G 6 1_555 A C 70 1_555 A G 7 1_555 A C 69 1_555 -0.203 -1.440 3.578 7.227 3.009 34.814 -2.818 1.453 3.338 4.952 -11.894 35.657 6 AA_G-3G-2:C60C61_AA A -3 ? A 61 ? A -2 ? A 60 ? 1 A G 7 1_555 A C 69 1_555 A A 8 1_555 A U 68 1_555 0.086 -1.129 3.006 -5.492 11.875 33.051 -3.353 -0.836 2.426 19.930 9.217 35.479 7 AA_G-2A-1:U59C60_AA A -2 ? A 60 ? A -1 ? A 59 ? 1 A A 8 1_555 A U 68 1_555 A C 9 1_555 A G 67 1_555 0.124 -1.457 3.273 1.061 5.687 31.989 -3.564 -0.042 2.979 10.215 -1.905 32.495 8 AA_A-1C0:G58U59_AA A -1 ? A 59 ? A 0 ? A 58 ? 1 A C 9 1_555 A G 67 1_555 A G 10 1_555 A C 66 1_555 -0.107 -1.783 3.266 -2.041 11.713 31.393 -4.839 -0.119 2.463 20.739 3.613 33.516 9 AA_C0G1:C57G58_AA A 0 ? A 58 ? A 1 ? A 57 ? 1 A G 10 1_555 A C 66 1_555 A A 11 1_555 A U 65 1_555 -0.124 -1.521 3.225 1.568 4.165 36.234 -2.981 0.406 3.030 6.666 -2.509 36.497 10 AA_G1A2:U56C57_AA A 1 ? A 57 ? A 2 ? A 56 ? 1 A A 11 1_555 A U 65 1_555 A U 12 1_555 A G 64 1_555 0.172 -1.145 3.467 2.637 5.340 38.115 -2.420 0.079 3.287 8.117 -4.008 38.560 11 AA_A2U3:G55U56_AA A 2 ? A 56 ? A 3 ? A 55 ? 1 A U 12 1_555 A G 64 1_555 A G 13 1_555 A C 63 1_555 -0.691 -1.846 3.094 1.953 16.798 26.293 -5.936 1.577 1.599 32.948 -3.830 31.181 12 AA_U3G4:C54G55_AA A 3 ? A 55 ? A 4 ? A 54 ? 1 A G 13 1_555 A C 63 1_555 A C 14 1_555 A G 62 1_555 0.789 -1.443 3.345 -0.006 3.988 31.755 -3.335 -1.433 3.145 7.252 0.012 31.998 13 AA_G4C5:G53C54_AA A 4 ? A 54 ? A 5 ? A 53 ? 1 A C 14 1_555 A G 62 1_555 A U 15 1_555 A G 61 1_555 0.532 -1.523 3.334 3.453 3.110 44.084 -2.311 -0.381 3.255 4.130 -4.585 44.316 14 AA_C5U6:G52G53_AA A 5 ? A 53 ? A 6 ? A 52 ? 1 A U 15 1_555 A G 61 1_555 A G 16 1_555 A C 60 1_555 -1.079 -1.691 2.768 3.752 8.856 22.908 -5.880 3.335 1.801 21.142 -8.957 24.820 15 AA_U6G7:C51G52_AA A 6 ? A 52 ? A 7 ? A 51 ? 1 A G 16 1_555 A C 60 1_555 A C 43 1_555 A G 59 1_555 -0.587 -1.564 3.369 1.346 5.326 39.882 -2.875 1.006 3.123 7.763 -1.961 40.243 16 AA_G7C34:G50C51_AA A 7 ? A 51 ? A 34 ? A 50 ? 1 A C 43 1_555 A G 59 1_555 A G 44 1_555 A U 58 1_555 -0.322 -2.941 3.583 -0.239 12.612 25.694 -8.518 0.604 1.954 26.427 0.500 28.577 17 AA_C34G35:U49G50_AA A 34 ? A 50 ? A 35 ? A 49 ? 1 A G 44 1_555 A U 58 1_555 A G 45 1_555 A C 57 1_555 -0.076 -2.017 3.165 -5.020 10.848 36.559 -4.265 -0.439 2.478 16.751 7.752 38.400 18 AA_G35G36:C48U49_AA A 35 ? A 49 ? A 36 ? A 48 ? 1 A G 45 1_555 A C 57 1_555 A G 46 1_555 A C 56 1_555 0.536 -1.904 3.336 -1.034 6.198 29.402 -4.890 -1.238 2.863 12.039 2.009 30.052 19 AA_G36G37:C47C48_AA A 36 ? A 48 ? A 37 ? A 47 ? 1 A G 46 1_555 A C 56 1_555 A G 47 1_555 A C 55 1_555 0.642 -2.418 3.655 4.393 12.370 35.543 -5.341 -0.418 2.750 19.464 -6.912 37.816 20 AA_G37G38:C46C47_AA A 37 ? A 47 ? A 38 ? A 46 ? 1 A G 47 1_555 A C 55 1_555 A U 48 1_555 A A 52 1_555 -2.786 -2.077 3.055 1.775 0.529 86.039 -1.533 2.078 2.998 0.387 -1.301 86.055 21 AA_G38U39:A43C46_AA A 38 ? A 46 ? A 39 ? A 43 ? 1 A U 48 1_555 A A 52 1_555 A U 49 1_555 A G 23 1_555 1.921 -1.903 3.550 5.501 3.038 41.948 -2.973 -2.038 3.622 4.216 -7.632 42.395 22 AA_U39U40:G14A43_AA A 39 ? A 43 ? A 40 ? A 14 ? 1 A C 37 1_555 A G 33 1_555 A C 38 1_555 A G 32 1_555 -0.848 -1.185 3.635 0.270 0.119 31.304 -2.221 1.628 3.624 0.221 -0.500 31.305 23 AA_C28C29:G23G24_AA A 28 ? A 24 ? A 29 ? A 23 ? 1 A C 38 1_555 A G 32 1_555 A A 39 1_555 A U 31 1_555 0.116 -1.613 3.066 -5.158 11.991 31.957 -4.311 -0.878 2.287 20.731 8.918 34.455 24 AA_C29A30:U22G23_AA A 29 ? A 23 ? A 30 ? A 22 ? 1 A A 39 1_555 A U 31 1_555 A G 40 1_555 A C 30 1_555 -0.030 -1.601 3.263 2.135 6.130 31.963 -3.869 0.408 2.906 10.991 -3.828 32.599 25 AA_A30G31:C21U22_AA A 30 ? A 22 ? A 31 ? A 21 ? 1 A G 40 1_555 A C 30 1_555 A G 41 1_555 A C 29 1_555 0.444 -2.287 3.232 1.059 7.028 31.225 -5.311 -0.629 2.680 12.848 -1.936 32.004 26 AA_G31G32:C20C21_AA A 31 ? A 21 ? A 32 ? A 20 ? 1 A G 41 1_555 A C 29 1_555 A A 42 1_555 A U 28 1_555 0.312 -1.605 3.258 4.891 5.009 34.463 -3.383 0.192 3.017 8.347 -8.151 35.145 27 AA_G32A33:U19C20_AA A 32 ? A 20 ? A 33 ? A 19 ? 1 A A 42 1_555 A U 28 1_555 A G 17 1_555 A C 27 1_555 -1.131 -1.769 3.129 3.444 5.881 42.962 -2.905 1.830 2.780 7.970 -4.667 43.474 28 AA_A33G8:C18U19_AA A 33 ? A 19 ? A 8 ? A 18 ? 1 A G 17 1_555 A C 27 1_555 A U 18 1_555 A A 26 1_555 -0.465 -1.717 3.223 -0.524 4.080 32.652 -3.697 0.736 2.999 7.221 0.928 32.903 29 AA_G8U9:A17C18_AA A 8 ? A 18 ? A 9 ? A 17 ? 1 A U 18 1_555 A A 26 1_555 A G 19 1_555 A C 25 1_555 0.874 -1.840 3.111 2.559 9.648 28.869 -5.176 -1.215 2.449 18.661 -4.950 30.511 30 AA_U9G10:C16A17_AA A 9 ? A 17 ? A 10 ? A 16 ? 1 A G 19 1_555 A C 25 1_555 A U 21 1_555 A U 54 1_555 2.904 -1.961 6.011 23.464 15.408 3.950 -11.978 6.209 2.184 45.094 -68.669 28.342 31 AA_G10U12:U45C16_AA A 10 ? A 16 ? A 12 ? A 45 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8V1H _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.022229 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002726 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024599 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008165 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O P # loop_