data_8VBF # _entry.id 8VBF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VBF pdb_00008vbf 10.2210/pdb8vbf/pdb WWPDB D_1000279206 ? ? EMDB EMD-43123 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-12-11 2 'Structure model' 1 1 2024-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VBF _pdbx_database_status.recvd_initial_deposition_date 2023-12-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Kinetic intermediate states of HIV-1 RT DNA synthesis captured by cryo-EM' _pdbx_database_related.db_id EMD-43123 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email guc9@pitt.edu _pdbx_contact_author.name_first Guillermo _pdbx_contact_author.name_last Calero _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3730-4676 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Vergara, S.' 1 0000-0003-4661-5193 'Zhou, X.' 2 ? 'Santiago, U.' 3 ? 'Conway, J.F.' 4 ? 'Sluis-Cremer, N.' 5 ? 'Calero, G.' 6 0000-0003-3730-4676 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 10553 _citation.page_last 10553 _citation.title 'Structural basis of deoxynucleotide addition by HIV-1 RT during reverse transcription.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-54618-y _citation.pdbx_database_id_PubMed 39632888 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vergara, S.' 1 ? primary 'Zhou, X.' 2 ? primary 'Santiago, U.' 3 ? primary 'Alaoui-El-Azher, M.' 4 ? primary 'Conway, J.F.' 5 ? primary 'Sluis-Cremer, N.' 6 ? primary 'Calero, G.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 reverse transcriptase/ribonuclease H P66 subunit' 64104.457 1 ? 'C280S D498N' 'UNP residues 600-1154' ? 2 polymer man 'HIV-1 reverse transcriptase P51 subunit' 51944.691 1 ? ? 'UNP residues 600-1027' ? 3 polymer syn 'DNA (40-MER)' 12365.926 1 ? ? ? ? 4 non-polymer syn ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; 491.182 1 ? ? ? ? 5 non-polymer syn 'PYROPHOSPHATE 2-' 175.959 1 ? ? ? ? 6 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFR ELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPA IFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDK WTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVY YDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETW ETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTE LQAIYLALQDSGLEVNIVTNSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAG ; ;MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFR ELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPA IFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDK WTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVY YDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETW ETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTE LQAIYLALQDSGLEVNIVTNSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAG ; A ? 2 'polypeptide(L)' no no ;MAHHHHHHALEVLFQGPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIK KKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRY QYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKE PPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELA ENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWG KTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQ ; ;MAHHHHHHALEVLFQGPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIK KKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRY QYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKE PPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELA ENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWG KTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQ ; B ? 3 polydeoxyribonucleotide no yes ;(DT)(DA)(DA)(DT)(DT)(DC)(OMC)(DC)(OMC)(DC)(DC)(DC)(DT)(DT)(DC)(DG)(DG)(DT)(DG) (DC)(DT)(DT)(DT)(DG)(DC)(DA)(DC)(DC)(DG)(DA)(DA)(DG)(DG)(DG)(DG)(DG)(DG)(DG)(DA) (DA) ; TAATTCCCCCCCTTCGGTGCTTTGCACCGAAGGGGGGGAA F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; DTP 5 'PYROPHOSPHATE 2-' POP 6 'MAGNESIUM ION' MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 PRO n 1 4 ILE n 1 5 SER n 1 6 PRO n 1 7 ILE n 1 8 GLU n 1 9 THR n 1 10 VAL n 1 11 PRO n 1 12 VAL n 1 13 LYS n 1 14 LEU n 1 15 LYS n 1 16 PRO n 1 17 GLY n 1 18 MET n 1 19 ASP n 1 20 GLY n 1 21 PRO n 1 22 LYS n 1 23 VAL n 1 24 LYS n 1 25 GLN n 1 26 TRP n 1 27 PRO n 1 28 LEU n 1 29 THR n 1 30 GLU n 1 31 GLU n 1 32 LYS n 1 33 ILE n 1 34 LYS n 1 35 ALA n 1 36 LEU n 1 37 VAL n 1 38 GLU n 1 39 ILE n 1 40 CYS n 1 41 THR n 1 42 GLU n 1 43 MET n 1 44 GLU n 1 45 LYS n 1 46 GLU n 1 47 GLY n 1 48 LYS n 1 49 ILE n 1 50 SER n 1 51 LYS n 1 52 ILE n 1 53 GLY n 1 54 PRO n 1 55 GLU n 1 56 ASN n 1 57 PRO n 1 58 TYR n 1 59 ASN n 1 60 THR n 1 61 PRO n 1 62 VAL n 1 63 PHE n 1 64 ALA n 1 65 ILE n 1 66 LYS n 1 67 LYS n 1 68 LYS n 1 69 ASP n 1 70 SER n 1 71 THR n 1 72 LYS n 1 73 TRP n 1 74 ARG n 1 75 LYS n 1 76 LEU n 1 77 VAL n 1 78 ASP n 1 79 PHE n 1 80 ARG n 1 81 GLU n 1 82 LEU n 1 83 ASN n 1 84 LYS n 1 85 ARG n 1 86 THR n 1 87 GLN n 1 88 ASP n 1 89 PHE n 1 90 TRP n 1 91 GLU n 1 92 VAL n 1 93 GLN n 1 94 LEU n 1 95 GLY n 1 96 ILE n 1 97 PRO n 1 98 HIS n 1 99 PRO n 1 100 ALA n 1 101 GLY n 1 102 LEU n 1 103 LYS n 1 104 LYS n 1 105 LYS n 1 106 LYS n 1 107 SER n 1 108 VAL n 1 109 THR n 1 110 VAL n 1 111 LEU n 1 112 ASP n 1 113 VAL n 1 114 GLY n 1 115 ASP n 1 116 ALA n 1 117 TYR n 1 118 PHE n 1 119 SER n 1 120 VAL n 1 121 PRO n 1 122 LEU n 1 123 ASP n 1 124 GLU n 1 125 ASP n 1 126 PHE n 1 127 ARG n 1 128 LYS n 1 129 TYR n 1 130 THR n 1 131 ALA n 1 132 PHE n 1 133 THR n 1 134 ILE n 1 135 PRO n 1 136 SER n 1 137 ILE n 1 138 ASN n 1 139 ASN n 1 140 GLU n 1 141 THR n 1 142 PRO n 1 143 GLY n 1 144 ILE n 1 145 ARG n 1 146 TYR n 1 147 GLN n 1 148 TYR n 1 149 ASN n 1 150 VAL n 1 151 LEU n 1 152 PRO n 1 153 GLN n 1 154 GLY n 1 155 TRP n 1 156 LYS n 1 157 GLY n 1 158 SER n 1 159 PRO n 1 160 ALA n 1 161 ILE n 1 162 PHE n 1 163 GLN n 1 164 SER n 1 165 SER n 1 166 MET n 1 167 THR n 1 168 LYS n 1 169 ILE n 1 170 LEU n 1 171 GLU n 1 172 PRO n 1 173 PHE n 1 174 LYS n 1 175 LYS n 1 176 GLN n 1 177 ASN n 1 178 PRO n 1 179 ASP n 1 180 ILE n 1 181 VAL n 1 182 ILE n 1 183 TYR n 1 184 GLN n 1 185 TYR n 1 186 MET n 1 187 ASP n 1 188 ASP n 1 189 LEU n 1 190 TYR n 1 191 VAL n 1 192 GLY n 1 193 SER n 1 194 ASP n 1 195 LEU n 1 196 GLU n 1 197 ILE n 1 198 GLY n 1 199 GLN n 1 200 HIS n 1 201 ARG n 1 202 THR n 1 203 LYS n 1 204 ILE n 1 205 GLU n 1 206 GLU n 1 207 LEU n 1 208 ARG n 1 209 GLN n 1 210 HIS n 1 211 LEU n 1 212 LEU n 1 213 ARG n 1 214 TRP n 1 215 GLY n 1 216 LEU n 1 217 THR n 1 218 THR n 1 219 PRO n 1 220 ASP n 1 221 LYS n 1 222 LYS n 1 223 HIS n 1 224 GLN n 1 225 LYS n 1 226 GLU n 1 227 PRO n 1 228 PRO n 1 229 PHE n 1 230 LEU n 1 231 TRP n 1 232 MET n 1 233 GLY n 1 234 TYR n 1 235 GLU n 1 236 LEU n 1 237 HIS n 1 238 PRO n 1 239 ASP n 1 240 LYS n 1 241 TRP n 1 242 THR n 1 243 VAL n 1 244 GLN n 1 245 PRO n 1 246 ILE n 1 247 VAL n 1 248 LEU n 1 249 PRO n 1 250 GLU n 1 251 LYS n 1 252 ASP n 1 253 SER n 1 254 TRP n 1 255 THR n 1 256 VAL n 1 257 ASN n 1 258 ASP n 1 259 ILE n 1 260 GLN n 1 261 LYS n 1 262 LEU n 1 263 VAL n 1 264 GLY n 1 265 LYS n 1 266 LEU n 1 267 ASN n 1 268 TRP n 1 269 ALA n 1 270 SER n 1 271 GLN n 1 272 ILE n 1 273 TYR n 1 274 PRO n 1 275 GLY n 1 276 ILE n 1 277 LYS n 1 278 VAL n 1 279 ARG n 1 280 GLN n 1 281 LEU n 1 282 SER n 1 283 LYS n 1 284 LEU n 1 285 LEU n 1 286 ARG n 1 287 GLY n 1 288 THR n 1 289 LYS n 1 290 ALA n 1 291 LEU n 1 292 THR n 1 293 GLU n 1 294 VAL n 1 295 ILE n 1 296 PRO n 1 297 LEU n 1 298 THR n 1 299 GLU n 1 300 GLU n 1 301 ALA n 1 302 GLU n 1 303 LEU n 1 304 GLU n 1 305 LEU n 1 306 ALA n 1 307 GLU n 1 308 ASN n 1 309 ARG n 1 310 GLU n 1 311 ILE n 1 312 LEU n 1 313 LYS n 1 314 GLU n 1 315 PRO n 1 316 VAL n 1 317 HIS n 1 318 GLY n 1 319 VAL n 1 320 TYR n 1 321 TYR n 1 322 ASP n 1 323 PRO n 1 324 SER n 1 325 LYS n 1 326 ASP n 1 327 LEU n 1 328 ILE n 1 329 ALA n 1 330 GLU n 1 331 ILE n 1 332 GLN n 1 333 LYS n 1 334 GLN n 1 335 GLY n 1 336 GLN n 1 337 GLY n 1 338 GLN n 1 339 TRP n 1 340 THR n 1 341 TYR n 1 342 GLN n 1 343 ILE n 1 344 TYR n 1 345 GLN n 1 346 GLU n 1 347 PRO n 1 348 PHE n 1 349 LYS n 1 350 ASN n 1 351 LEU n 1 352 LYS n 1 353 THR n 1 354 GLY n 1 355 LYS n 1 356 TYR n 1 357 ALA n 1 358 ARG n 1 359 MET n 1 360 ARG n 1 361 GLY n 1 362 ALA n 1 363 HIS n 1 364 THR n 1 365 ASN n 1 366 ASP n 1 367 VAL n 1 368 LYS n 1 369 GLN n 1 370 LEU n 1 371 THR n 1 372 GLU n 1 373 ALA n 1 374 VAL n 1 375 GLN n 1 376 LYS n 1 377 ILE n 1 378 THR n 1 379 THR n 1 380 GLU n 1 381 SER n 1 382 ILE n 1 383 VAL n 1 384 ILE n 1 385 TRP n 1 386 GLY n 1 387 LYS n 1 388 THR n 1 389 PRO n 1 390 LYS n 1 391 PHE n 1 392 LYS n 1 393 LEU n 1 394 PRO n 1 395 ILE n 1 396 GLN n 1 397 LYS n 1 398 GLU n 1 399 THR n 1 400 TRP n 1 401 GLU n 1 402 THR n 1 403 TRP n 1 404 TRP n 1 405 THR n 1 406 GLU n 1 407 TYR n 1 408 TRP n 1 409 GLN n 1 410 ALA n 1 411 THR n 1 412 TRP n 1 413 ILE n 1 414 PRO n 1 415 GLU n 1 416 TRP n 1 417 GLU n 1 418 PHE n 1 419 VAL n 1 420 ASN n 1 421 THR n 1 422 PRO n 1 423 PRO n 1 424 LEU n 1 425 VAL n 1 426 LYS n 1 427 LEU n 1 428 TRP n 1 429 TYR n 1 430 GLN n 1 431 LEU n 1 432 GLU n 1 433 LYS n 1 434 GLU n 1 435 PRO n 1 436 ILE n 1 437 VAL n 1 438 GLY n 1 439 ALA n 1 440 GLU n 1 441 THR n 1 442 PHE n 1 443 TYR n 1 444 VAL n 1 445 ASP n 1 446 GLY n 1 447 ALA n 1 448 ALA n 1 449 ASN n 1 450 ARG n 1 451 GLU n 1 452 THR n 1 453 LYS n 1 454 LEU n 1 455 GLY n 1 456 LYS n 1 457 ALA n 1 458 GLY n 1 459 TYR n 1 460 VAL n 1 461 THR n 1 462 ASN n 1 463 LYS n 1 464 GLY n 1 465 ARG n 1 466 GLN n 1 467 LYS n 1 468 VAL n 1 469 VAL n 1 470 PRO n 1 471 LEU n 1 472 THR n 1 473 ASN n 1 474 THR n 1 475 THR n 1 476 ASN n 1 477 GLN n 1 478 LYS n 1 479 THR n 1 480 GLU n 1 481 LEU n 1 482 GLN n 1 483 ALA n 1 484 ILE n 1 485 TYR n 1 486 LEU n 1 487 ALA n 1 488 LEU n 1 489 GLN n 1 490 ASP n 1 491 SER n 1 492 GLY n 1 493 LEU n 1 494 GLU n 1 495 VAL n 1 496 ASN n 1 497 ILE n 1 498 VAL n 1 499 THR n 1 500 ASN n 1 501 SER n 1 502 GLN n 1 503 TYR n 1 504 ALA n 1 505 LEU n 1 506 GLY n 1 507 ILE n 1 508 ILE n 1 509 GLN n 1 510 ALA n 1 511 GLN n 1 512 PRO n 1 513 ASP n 1 514 LYS n 1 515 SER n 1 516 GLU n 1 517 SER n 1 518 GLU n 1 519 LEU n 1 520 VAL n 1 521 ASN n 1 522 GLN n 1 523 ILE n 1 524 ILE n 1 525 GLU n 1 526 GLN n 1 527 LEU n 1 528 ILE n 1 529 LYS n 1 530 LYS n 1 531 GLU n 1 532 LYS n 1 533 VAL n 1 534 TYR n 1 535 LEU n 1 536 ALA n 1 537 TRP n 1 538 VAL n 1 539 PRO n 1 540 ALA n 1 541 HIS n 1 542 LYS n 1 543 GLY n 1 544 ILE n 1 545 GLY n 1 546 GLY n 1 547 ASN n 1 548 GLU n 1 549 GLN n 1 550 VAL n 1 551 ASP n 1 552 LYS n 1 553 LEU n 1 554 VAL n 1 555 SER n 1 556 ALA n 1 557 GLY n 2 1 MET n 2 2 ALA n 2 3 HIS n 2 4 HIS n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 ALA n 2 10 LEU n 2 11 GLU n 2 12 VAL n 2 13 LEU n 2 14 PHE n 2 15 GLN n 2 16 GLY n 2 17 PRO n 2 18 ILE n 2 19 SER n 2 20 PRO n 2 21 ILE n 2 22 GLU n 2 23 THR n 2 24 VAL n 2 25 PRO n 2 26 VAL n 2 27 LYS n 2 28 LEU n 2 29 LYS n 2 30 PRO n 2 31 GLY n 2 32 MET n 2 33 ASP n 2 34 GLY n 2 35 PRO n 2 36 LYS n 2 37 VAL n 2 38 LYS n 2 39 GLN n 2 40 TRP n 2 41 PRO n 2 42 LEU n 2 43 THR n 2 44 GLU n 2 45 GLU n 2 46 LYS n 2 47 ILE n 2 48 LYS n 2 49 ALA n 2 50 LEU n 2 51 VAL n 2 52 GLU n 2 53 ILE n 2 54 CYS n 2 55 THR n 2 56 GLU n 2 57 MET n 2 58 GLU n 2 59 LYS n 2 60 GLU n 2 61 GLY n 2 62 LYS n 2 63 ILE n 2 64 SER n 2 65 LYS n 2 66 ILE n 2 67 GLY n 2 68 PRO n 2 69 GLU n 2 70 ASN n 2 71 PRO n 2 72 TYR n 2 73 ASN n 2 74 THR n 2 75 PRO n 2 76 VAL n 2 77 PHE n 2 78 ALA n 2 79 ILE n 2 80 LYS n 2 81 LYS n 2 82 LYS n 2 83 ASP n 2 84 SER n 2 85 THR n 2 86 LYS n 2 87 TRP n 2 88 ARG n 2 89 LYS n 2 90 LEU n 2 91 VAL n 2 92 ASP n 2 93 PHE n 2 94 ARG n 2 95 GLU n 2 96 LEU n 2 97 ASN n 2 98 LYS n 2 99 ARG n 2 100 THR n 2 101 GLN n 2 102 ASP n 2 103 PHE n 2 104 TRP n 2 105 GLU n 2 106 VAL n 2 107 GLN n 2 108 LEU n 2 109 GLY n 2 110 ILE n 2 111 PRO n 2 112 HIS n 2 113 PRO n 2 114 ALA n 2 115 GLY n 2 116 LEU n 2 117 LYS n 2 118 LYS n 2 119 LYS n 2 120 LYS n 2 121 SER n 2 122 VAL n 2 123 THR n 2 124 VAL n 2 125 LEU n 2 126 ASP n 2 127 VAL n 2 128 GLY n 2 129 ASP n 2 130 ALA n 2 131 TYR n 2 132 PHE n 2 133 SER n 2 134 VAL n 2 135 PRO n 2 136 LEU n 2 137 ASP n 2 138 GLU n 2 139 ASP n 2 140 PHE n 2 141 ARG n 2 142 LYS n 2 143 TYR n 2 144 THR n 2 145 ALA n 2 146 PHE n 2 147 THR n 2 148 ILE n 2 149 PRO n 2 150 SER n 2 151 ILE n 2 152 ASN n 2 153 ASN n 2 154 GLU n 2 155 THR n 2 156 PRO n 2 157 GLY n 2 158 ILE n 2 159 ARG n 2 160 TYR n 2 161 GLN n 2 162 TYR n 2 163 ASN n 2 164 VAL n 2 165 LEU n 2 166 PRO n 2 167 GLN n 2 168 GLY n 2 169 TRP n 2 170 LYS n 2 171 GLY n 2 172 SER n 2 173 PRO n 2 174 ALA n 2 175 ILE n 2 176 PHE n 2 177 GLN n 2 178 SER n 2 179 SER n 2 180 MET n 2 181 THR n 2 182 LYS n 2 183 ILE n 2 184 LEU n 2 185 GLU n 2 186 PRO n 2 187 PHE n 2 188 LYS n 2 189 LYS n 2 190 GLN n 2 191 ASN n 2 192 PRO n 2 193 ASP n 2 194 ILE n 2 195 VAL n 2 196 ILE n 2 197 TYR n 2 198 GLN n 2 199 TYR n 2 200 MET n 2 201 ASP n 2 202 ASP n 2 203 LEU n 2 204 TYR n 2 205 VAL n 2 206 GLY n 2 207 SER n 2 208 ASP n 2 209 LEU n 2 210 GLU n 2 211 ILE n 2 212 GLY n 2 213 GLN n 2 214 HIS n 2 215 ARG n 2 216 THR n 2 217 LYS n 2 218 ILE n 2 219 GLU n 2 220 GLU n 2 221 LEU n 2 222 ARG n 2 223 GLN n 2 224 HIS n 2 225 LEU n 2 226 LEU n 2 227 ARG n 2 228 TRP n 2 229 GLY n 2 230 LEU n 2 231 THR n 2 232 THR n 2 233 PRO n 2 234 ASP n 2 235 LYS n 2 236 LYS n 2 237 HIS n 2 238 GLN n 2 239 LYS n 2 240 GLU n 2 241 PRO n 2 242 PRO n 2 243 PHE n 2 244 LEU n 2 245 TRP n 2 246 MET n 2 247 GLY n 2 248 TYR n 2 249 GLU n 2 250 LEU n 2 251 HIS n 2 252 PRO n 2 253 ASP n 2 254 LYS n 2 255 TRP n 2 256 THR n 2 257 VAL n 2 258 GLN n 2 259 PRO n 2 260 ILE n 2 261 VAL n 2 262 LEU n 2 263 PRO n 2 264 GLU n 2 265 LYS n 2 266 ASP n 2 267 SER n 2 268 TRP n 2 269 THR n 2 270 VAL n 2 271 ASN n 2 272 ASP n 2 273 ILE n 2 274 GLN n 2 275 LYS n 2 276 LEU n 2 277 VAL n 2 278 GLY n 2 279 LYS n 2 280 LEU n 2 281 ASN n 2 282 TRP n 2 283 ALA n 2 284 SER n 2 285 GLN n 2 286 ILE n 2 287 TYR n 2 288 PRO n 2 289 GLY n 2 290 ILE n 2 291 LYS n 2 292 VAL n 2 293 ARG n 2 294 GLN n 2 295 LEU n 2 296 CYS n 2 297 LYS n 2 298 LEU n 2 299 LEU n 2 300 ARG n 2 301 GLY n 2 302 THR n 2 303 LYS n 2 304 ALA n 2 305 LEU n 2 306 THR n 2 307 GLU n 2 308 VAL n 2 309 ILE n 2 310 PRO n 2 311 LEU n 2 312 THR n 2 313 GLU n 2 314 GLU n 2 315 ALA n 2 316 GLU n 2 317 LEU n 2 318 GLU n 2 319 LEU n 2 320 ALA n 2 321 GLU n 2 322 ASN n 2 323 ARG n 2 324 GLU n 2 325 ILE n 2 326 LEU n 2 327 LYS n 2 328 GLU n 2 329 PRO n 2 330 VAL n 2 331 HIS n 2 332 GLY n 2 333 VAL n 2 334 TYR n 2 335 TYR n 2 336 ASP n 2 337 PRO n 2 338 SER n 2 339 LYS n 2 340 ASP n 2 341 LEU n 2 342 ILE n 2 343 ALA n 2 344 GLU n 2 345 ILE n 2 346 GLN n 2 347 LYS n 2 348 GLN n 2 349 GLY n 2 350 GLN n 2 351 GLY n 2 352 GLN n 2 353 TRP n 2 354 THR n 2 355 TYR n 2 356 GLN n 2 357 ILE n 2 358 TYR n 2 359 GLN n 2 360 GLU n 2 361 PRO n 2 362 PHE n 2 363 LYS n 2 364 ASN n 2 365 LEU n 2 366 LYS n 2 367 THR n 2 368 GLY n 2 369 LYS n 2 370 TYR n 2 371 ALA n 2 372 ARG n 2 373 MET n 2 374 ARG n 2 375 GLY n 2 376 ALA n 2 377 HIS n 2 378 THR n 2 379 ASN n 2 380 ASP n 2 381 VAL n 2 382 LYS n 2 383 GLN n 2 384 LEU n 2 385 THR n 2 386 GLU n 2 387 ALA n 2 388 VAL n 2 389 GLN n 2 390 LYS n 2 391 ILE n 2 392 THR n 2 393 THR n 2 394 GLU n 2 395 SER n 2 396 ILE n 2 397 VAL n 2 398 ILE n 2 399 TRP n 2 400 GLY n 2 401 LYS n 2 402 THR n 2 403 PRO n 2 404 LYS n 2 405 PHE n 2 406 LYS n 2 407 LEU n 2 408 PRO n 2 409 ILE n 2 410 GLN n 2 411 LYS n 2 412 GLU n 2 413 THR n 2 414 TRP n 2 415 GLU n 2 416 THR n 2 417 TRP n 2 418 TRP n 2 419 THR n 2 420 GLU n 2 421 TYR n 2 422 TRP n 2 423 GLN n 2 424 ALA n 2 425 THR n 2 426 TRP n 2 427 ILE n 2 428 PRO n 2 429 GLU n 2 430 TRP n 2 431 GLU n 2 432 PHE n 2 433 VAL n 2 434 ASN n 2 435 THR n 2 436 PRO n 2 437 PRO n 2 438 LEU n 2 439 VAL n 2 440 LYS n 2 441 LEU n 2 442 TRP n 2 443 TYR n 2 444 GLN n 3 1 DT n 3 2 DA n 3 3 DA n 3 4 DT n 3 5 DT n 3 6 DC n 3 7 OMC n 3 8 DC n 3 9 OMC n 3 10 DC n 3 11 DC n 3 12 DC n 3 13 DT n 3 14 DT n 3 15 DC n 3 16 DG n 3 17 DG n 3 18 DT n 3 19 DG n 3 20 DC n 3 21 DT n 3 22 DT n 3 23 DT n 3 24 DG n 3 25 DC n 3 26 DA n 3 27 DC n 3 28 DC n 3 29 DG n 3 30 DA n 3 31 DA n 3 32 DG n 3 33 DG n 3 34 DG n 3 35 DG n 3 36 DG n 3 37 DG n 3 38 DG n 3 39 DA n 3 40 DA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 557 ? ? gag-pol ? ? ? ? ? ? 'Human immunodeficiency virus 1' 11676 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 444 ? ? gag-pol ? ? ? ? ? ? 'Human immunodeficiency virus 1' 11676 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 40 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DTP non-polymer . ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; ? 'C10 H16 N5 O12 P3' 491.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 POP non-polymer . 'PYROPHOSPHATE 2-' ? 'H2 O7 P2 -2' 175.959 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 VAL 2 0 ? ? ? A . n A 1 3 PRO 3 1 1 PRO PRO A . n A 1 4 ILE 4 2 2 ILE ILE A . n A 1 5 SER 5 3 3 SER SER A . n A 1 6 PRO 6 4 4 PRO PRO A . n A 1 7 ILE 7 5 5 ILE ILE A . n A 1 8 GLU 8 6 6 GLU GLU A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 VAL 10 8 8 VAL VAL A . n A 1 11 PRO 11 9 9 PRO PRO A . n A 1 12 VAL 12 10 10 VAL VAL A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 GLY 17 15 15 GLY GLY A . n A 1 18 MET 18 16 16 MET MET A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 GLY 20 18 18 GLY GLY A . n A 1 21 PRO 21 19 19 PRO PRO A . n A 1 22 LYS 22 20 20 LYS LYS A . n A 1 23 VAL 23 21 21 VAL VAL A . n A 1 24 LYS 24 22 22 LYS LYS A . n A 1 25 GLN 25 23 23 GLN GLN A . n A 1 26 TRP 26 24 24 TRP TRP A . n A 1 27 PRO 27 25 25 PRO PRO A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 THR 29 27 27 THR THR A . n A 1 30 GLU 30 28 28 GLU GLU A . n A 1 31 GLU 31 29 29 GLU GLU A . n A 1 32 LYS 32 30 30 LYS LYS A . n A 1 33 ILE 33 31 31 ILE ILE A . n A 1 34 LYS 34 32 32 LYS LYS A . n A 1 35 ALA 35 33 33 ALA ALA A . n A 1 36 LEU 36 34 34 LEU LEU A . n A 1 37 VAL 37 35 35 VAL VAL A . n A 1 38 GLU 38 36 36 GLU GLU A . n A 1 39 ILE 39 37 37 ILE ILE A . n A 1 40 CYS 40 38 38 CYS CYS A . n A 1 41 THR 41 39 39 THR THR A . n A 1 42 GLU 42 40 40 GLU GLU A . n A 1 43 MET 43 41 41 MET MET A . n A 1 44 GLU 44 42 42 GLU GLU A . n A 1 45 LYS 45 43 43 LYS LYS A . n A 1 46 GLU 46 44 44 GLU GLU A . n A 1 47 GLY 47 45 45 GLY GLY A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 ILE 49 47 47 ILE ILE A . n A 1 50 SER 50 48 48 SER SER A . n A 1 51 LYS 51 49 49 LYS LYS A . n A 1 52 ILE 52 50 50 ILE ILE A . n A 1 53 GLY 53 51 51 GLY GLY A . n A 1 54 PRO 54 52 52 PRO PRO A . n A 1 55 GLU 55 53 53 GLU GLU A . n A 1 56 ASN 56 54 54 ASN ASN A . n A 1 57 PRO 57 55 55 PRO PRO A . n A 1 58 TYR 58 56 56 TYR TYR A . n A 1 59 ASN 59 57 57 ASN ASN A . n A 1 60 THR 60 58 58 THR THR A . n A 1 61 PRO 61 59 59 PRO PRO A . n A 1 62 VAL 62 60 60 VAL VAL A . n A 1 63 PHE 63 61 61 PHE PHE A . n A 1 64 ALA 64 62 62 ALA ALA A . n A 1 65 ILE 65 63 63 ILE ILE A . n A 1 66 LYS 66 64 64 LYS LYS A . n A 1 67 LYS 67 65 65 LYS LYS A . n A 1 68 LYS 68 66 66 LYS LYS A . n A 1 69 ASP 69 67 67 ASP ASP A . n A 1 70 SER 70 68 68 SER SER A . n A 1 71 THR 71 69 69 THR THR A . n A 1 72 LYS 72 70 70 LYS LYS A . n A 1 73 TRP 73 71 71 TRP TRP A . n A 1 74 ARG 74 72 72 ARG ARG A . n A 1 75 LYS 75 73 73 LYS LYS A . n A 1 76 LEU 76 74 74 LEU LEU A . n A 1 77 VAL 77 75 75 VAL VAL A . n A 1 78 ASP 78 76 76 ASP ASP A . n A 1 79 PHE 79 77 77 PHE PHE A . n A 1 80 ARG 80 78 78 ARG ARG A . n A 1 81 GLU 81 79 79 GLU GLU A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 ASN 83 81 81 ASN ASN A . n A 1 84 LYS 84 82 82 LYS LYS A . n A 1 85 ARG 85 83 83 ARG ARG A . n A 1 86 THR 86 84 84 THR THR A . n A 1 87 GLN 87 85 85 GLN GLN A . n A 1 88 ASP 88 86 86 ASP ASP A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 TRP 90 88 88 TRP TRP A . n A 1 91 GLU 91 89 89 GLU GLU A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 GLN 93 91 91 GLN GLN A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 ILE 96 94 94 ILE ILE A . n A 1 97 PRO 97 95 95 PRO PRO A . n A 1 98 HIS 98 96 96 HIS HIS A . n A 1 99 PRO 99 97 97 PRO PRO A . n A 1 100 ALA 100 98 98 ALA ALA A . n A 1 101 GLY 101 99 99 GLY GLY A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 LYS 103 101 101 LYS LYS A . n A 1 104 LYS 104 102 102 LYS LYS A . n A 1 105 LYS 105 103 103 LYS LYS A . n A 1 106 LYS 106 104 104 LYS LYS A . n A 1 107 SER 107 105 105 SER SER A . n A 1 108 VAL 108 106 106 VAL VAL A . n A 1 109 THR 109 107 107 THR THR A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 LEU 111 109 109 LEU LEU A . n A 1 112 ASP 112 110 110 ASP ASP A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 ASP 115 113 113 ASP ASP A . n A 1 116 ALA 116 114 114 ALA ALA A . n A 1 117 TYR 117 115 115 TYR TYR A . n A 1 118 PHE 118 116 116 PHE PHE A . n A 1 119 SER 119 117 117 SER SER A . n A 1 120 VAL 120 118 118 VAL VAL A . n A 1 121 PRO 121 119 119 PRO PRO A . n A 1 122 LEU 122 120 120 LEU LEU A . n A 1 123 ASP 123 121 121 ASP ASP A . n A 1 124 GLU 124 122 122 GLU GLU A . n A 1 125 ASP 125 123 123 ASP ASP A . n A 1 126 PHE 126 124 124 PHE PHE A . n A 1 127 ARG 127 125 125 ARG ARG A . n A 1 128 LYS 128 126 126 LYS LYS A . n A 1 129 TYR 129 127 127 TYR TYR A . n A 1 130 THR 130 128 128 THR THR A . n A 1 131 ALA 131 129 129 ALA ALA A . n A 1 132 PHE 132 130 130 PHE PHE A . n A 1 133 THR 133 131 131 THR THR A . n A 1 134 ILE 134 132 132 ILE ILE A . n A 1 135 PRO 135 133 133 PRO PRO A . n A 1 136 SER 136 134 134 SER SER A . n A 1 137 ILE 137 135 135 ILE ILE A . n A 1 138 ASN 138 136 136 ASN ASN A . n A 1 139 ASN 139 137 137 ASN ASN A . n A 1 140 GLU 140 138 138 GLU GLU A . n A 1 141 THR 141 139 139 THR THR A . n A 1 142 PRO 142 140 140 PRO PRO A . n A 1 143 GLY 143 141 141 GLY GLY A . n A 1 144 ILE 144 142 142 ILE ILE A . n A 1 145 ARG 145 143 143 ARG ARG A . n A 1 146 TYR 146 144 144 TYR TYR A . n A 1 147 GLN 147 145 145 GLN GLN A . n A 1 148 TYR 148 146 146 TYR TYR A . n A 1 149 ASN 149 147 147 ASN ASN A . n A 1 150 VAL 150 148 148 VAL VAL A . n A 1 151 LEU 151 149 149 LEU LEU A . n A 1 152 PRO 152 150 150 PRO PRO A . n A 1 153 GLN 153 151 151 GLN GLN A . n A 1 154 GLY 154 152 152 GLY GLY A . n A 1 155 TRP 155 153 153 TRP TRP A . n A 1 156 LYS 156 154 154 LYS LYS A . n A 1 157 GLY 157 155 155 GLY GLY A . n A 1 158 SER 158 156 156 SER SER A . n A 1 159 PRO 159 157 157 PRO PRO A . n A 1 160 ALA 160 158 158 ALA ALA A . n A 1 161 ILE 161 159 159 ILE ILE A . n A 1 162 PHE 162 160 160 PHE PHE A . n A 1 163 GLN 163 161 161 GLN GLN A . n A 1 164 SER 164 162 162 SER SER A . n A 1 165 SER 165 163 163 SER SER A . n A 1 166 MET 166 164 164 MET MET A . n A 1 167 THR 167 165 165 THR THR A . n A 1 168 LYS 168 166 166 LYS LYS A . n A 1 169 ILE 169 167 167 ILE ILE A . n A 1 170 LEU 170 168 168 LEU LEU A . n A 1 171 GLU 171 169 169 GLU GLU A . n A 1 172 PRO 172 170 170 PRO PRO A . n A 1 173 PHE 173 171 171 PHE PHE A . n A 1 174 LYS 174 172 172 LYS LYS A . n A 1 175 LYS 175 173 173 LYS LYS A . n A 1 176 GLN 176 174 174 GLN GLN A . n A 1 177 ASN 177 175 175 ASN ASN A . n A 1 178 PRO 178 176 176 PRO PRO A . n A 1 179 ASP 179 177 177 ASP ASP A . n A 1 180 ILE 180 178 178 ILE ILE A . n A 1 181 VAL 181 179 179 VAL VAL A . n A 1 182 ILE 182 180 180 ILE ILE A . n A 1 183 TYR 183 181 181 TYR TYR A . n A 1 184 GLN 184 182 182 GLN GLN A . n A 1 185 TYR 185 183 183 TYR TYR A . n A 1 186 MET 186 184 184 MET MET A . n A 1 187 ASP 187 185 185 ASP ASP A . n A 1 188 ASP 188 186 186 ASP ASP A . n A 1 189 LEU 189 187 187 LEU LEU A . n A 1 190 TYR 190 188 188 TYR TYR A . n A 1 191 VAL 191 189 189 VAL VAL A . n A 1 192 GLY 192 190 190 GLY GLY A . n A 1 193 SER 193 191 191 SER SER A . n A 1 194 ASP 194 192 192 ASP ASP A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 GLU 196 194 194 GLU GLU A . n A 1 197 ILE 197 195 195 ILE ILE A . n A 1 198 GLY 198 196 196 GLY GLY A . n A 1 199 GLN 199 197 197 GLN GLN A . n A 1 200 HIS 200 198 198 HIS HIS A . n A 1 201 ARG 201 199 199 ARG ARG A . n A 1 202 THR 202 200 200 THR THR A . n A 1 203 LYS 203 201 201 LYS LYS A . n A 1 204 ILE 204 202 202 ILE ILE A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 GLU 206 204 204 GLU GLU A . n A 1 207 LEU 207 205 205 LEU LEU A . n A 1 208 ARG 208 206 206 ARG ARG A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 HIS 210 208 208 HIS HIS A . n A 1 211 LEU 211 209 209 LEU LEU A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 ARG 213 211 211 ARG ARG A . n A 1 214 TRP 214 212 212 TRP TRP A . n A 1 215 GLY 215 213 213 GLY GLY A . n A 1 216 LEU 216 214 214 LEU LEU A . n A 1 217 THR 217 215 215 THR THR A . n A 1 218 THR 218 216 216 THR THR A . n A 1 219 PRO 219 217 217 PRO PRO A . n A 1 220 ASP 220 218 218 ASP ASP A . n A 1 221 LYS 221 219 219 LYS LYS A . n A 1 222 LYS 222 220 220 LYS LYS A . n A 1 223 HIS 223 221 221 HIS HIS A . n A 1 224 GLN 224 222 222 GLN GLN A . n A 1 225 LYS 225 223 223 LYS LYS A . n A 1 226 GLU 226 224 224 GLU GLU A . n A 1 227 PRO 227 225 225 PRO PRO A . n A 1 228 PRO 228 226 226 PRO PRO A . n A 1 229 PHE 229 227 227 PHE PHE A . n A 1 230 LEU 230 228 228 LEU LEU A . n A 1 231 TRP 231 229 229 TRP TRP A . n A 1 232 MET 232 230 230 MET MET A . n A 1 233 GLY 233 231 231 GLY GLY A . n A 1 234 TYR 234 232 232 TYR TYR A . n A 1 235 GLU 235 233 233 GLU GLU A . n A 1 236 LEU 236 234 234 LEU LEU A . n A 1 237 HIS 237 235 235 HIS HIS A . n A 1 238 PRO 238 236 236 PRO PRO A . n A 1 239 ASP 239 237 237 ASP ASP A . n A 1 240 LYS 240 238 238 LYS LYS A . n A 1 241 TRP 241 239 239 TRP TRP A . n A 1 242 THR 242 240 240 THR THR A . n A 1 243 VAL 243 241 241 VAL VAL A . n A 1 244 GLN 244 242 242 GLN GLN A . n A 1 245 PRO 245 243 243 PRO PRO A . n A 1 246 ILE 246 244 244 ILE ILE A . n A 1 247 VAL 247 245 245 VAL VAL A . n A 1 248 LEU 248 246 246 LEU LEU A . n A 1 249 PRO 249 247 247 PRO PRO A . n A 1 250 GLU 250 248 248 GLU GLU A . n A 1 251 LYS 251 249 249 LYS LYS A . n A 1 252 ASP 252 250 250 ASP ASP A . n A 1 253 SER 253 251 251 SER SER A . n A 1 254 TRP 254 252 252 TRP TRP A . n A 1 255 THR 255 253 253 THR THR A . n A 1 256 VAL 256 254 254 VAL VAL A . n A 1 257 ASN 257 255 255 ASN ASN A . n A 1 258 ASP 258 256 256 ASP ASP A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 GLN 260 258 258 GLN GLN A . n A 1 261 LYS 261 259 259 LYS LYS A . n A 1 262 LEU 262 260 260 LEU LEU A . n A 1 263 VAL 263 261 261 VAL VAL A . n A 1 264 GLY 264 262 262 GLY GLY A . n A 1 265 LYS 265 263 263 LYS LYS A . n A 1 266 LEU 266 264 264 LEU LEU A . n A 1 267 ASN 267 265 265 ASN ASN A . n A 1 268 TRP 268 266 266 TRP TRP A . n A 1 269 ALA 269 267 267 ALA ALA A . n A 1 270 SER 270 268 268 SER SER A . n A 1 271 GLN 271 269 269 GLN GLN A . n A 1 272 ILE 272 270 270 ILE ILE A . n A 1 273 TYR 273 271 271 TYR TYR A . n A 1 274 PRO 274 272 272 PRO PRO A . n A 1 275 GLY 275 273 273 GLY GLY A . n A 1 276 ILE 276 274 274 ILE ILE A . n A 1 277 LYS 277 275 275 LYS LYS A . n A 1 278 VAL 278 276 276 VAL VAL A . n A 1 279 ARG 279 277 277 ARG ARG A . n A 1 280 GLN 280 278 278 GLN GLN A . n A 1 281 LEU 281 279 279 LEU LEU A . n A 1 282 SER 282 280 280 SER SER A . n A 1 283 LYS 283 281 281 LYS LYS A . n A 1 284 LEU 284 282 282 LEU LEU A . n A 1 285 LEU 285 283 283 LEU LEU A . n A 1 286 ARG 286 284 284 ARG ARG A . n A 1 287 GLY 287 285 285 GLY GLY A . n A 1 288 THR 288 286 286 THR THR A . n A 1 289 LYS 289 287 287 LYS LYS A . n A 1 290 ALA 290 288 288 ALA ALA A . n A 1 291 LEU 291 289 289 LEU LEU A . n A 1 292 THR 292 290 290 THR THR A . n A 1 293 GLU 293 291 291 GLU GLU A . n A 1 294 VAL 294 292 292 VAL VAL A . n A 1 295 ILE 295 293 293 ILE ILE A . n A 1 296 PRO 296 294 294 PRO PRO A . n A 1 297 LEU 297 295 295 LEU LEU A . n A 1 298 THR 298 296 296 THR THR A . n A 1 299 GLU 299 297 297 GLU GLU A . n A 1 300 GLU 300 298 298 GLU GLU A . n A 1 301 ALA 301 299 299 ALA ALA A . n A 1 302 GLU 302 300 300 GLU GLU A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 GLU 304 302 302 GLU GLU A . n A 1 305 LEU 305 303 303 LEU LEU A . n A 1 306 ALA 306 304 304 ALA ALA A . n A 1 307 GLU 307 305 305 GLU GLU A . n A 1 308 ASN 308 306 306 ASN ASN A . n A 1 309 ARG 309 307 307 ARG ARG A . n A 1 310 GLU 310 308 308 GLU GLU A . n A 1 311 ILE 311 309 309 ILE ILE A . n A 1 312 LEU 312 310 310 LEU LEU A . n A 1 313 LYS 313 311 311 LYS LYS A . n A 1 314 GLU 314 312 312 GLU GLU A . n A 1 315 PRO 315 313 313 PRO PRO A . n A 1 316 VAL 316 314 314 VAL VAL A . n A 1 317 HIS 317 315 315 HIS HIS A . n A 1 318 GLY 318 316 316 GLY GLY A . n A 1 319 VAL 319 317 317 VAL VAL A . n A 1 320 TYR 320 318 318 TYR TYR A . n A 1 321 TYR 321 319 319 TYR TYR A . n A 1 322 ASP 322 320 320 ASP ASP A . n A 1 323 PRO 323 321 321 PRO PRO A . n A 1 324 SER 324 322 322 SER SER A . n A 1 325 LYS 325 323 323 LYS LYS A . n A 1 326 ASP 326 324 324 ASP ASP A . n A 1 327 LEU 327 325 325 LEU LEU A . n A 1 328 ILE 328 326 326 ILE ILE A . n A 1 329 ALA 329 327 327 ALA ALA A . n A 1 330 GLU 330 328 328 GLU GLU A . n A 1 331 ILE 331 329 329 ILE ILE A . n A 1 332 GLN 332 330 330 GLN GLN A . n A 1 333 LYS 333 331 331 LYS LYS A . n A 1 334 GLN 334 332 332 GLN GLN A . n A 1 335 GLY 335 333 333 GLY GLY A . n A 1 336 GLN 336 334 334 GLN GLN A . n A 1 337 GLY 337 335 335 GLY GLY A . n A 1 338 GLN 338 336 336 GLN GLN A . n A 1 339 TRP 339 337 337 TRP TRP A . n A 1 340 THR 340 338 338 THR THR A . n A 1 341 TYR 341 339 339 TYR TYR A . n A 1 342 GLN 342 340 340 GLN GLN A . n A 1 343 ILE 343 341 341 ILE ILE A . n A 1 344 TYR 344 342 342 TYR TYR A . n A 1 345 GLN 345 343 343 GLN GLN A . n A 1 346 GLU 346 344 344 GLU GLU A . n A 1 347 PRO 347 345 345 PRO PRO A . n A 1 348 PHE 348 346 346 PHE PHE A . n A 1 349 LYS 349 347 347 LYS LYS A . n A 1 350 ASN 350 348 348 ASN ASN A . n A 1 351 LEU 351 349 349 LEU LEU A . n A 1 352 LYS 352 350 350 LYS LYS A . n A 1 353 THR 353 351 351 THR THR A . n A 1 354 GLY 354 352 352 GLY GLY A . n A 1 355 LYS 355 353 353 LYS LYS A . n A 1 356 TYR 356 354 354 TYR TYR A . n A 1 357 ALA 357 355 355 ALA ALA A . n A 1 358 ARG 358 356 356 ARG ARG A . n A 1 359 MET 359 357 357 MET MET A . n A 1 360 ARG 360 358 358 ARG ARG A . n A 1 361 GLY 361 359 359 GLY GLY A . n A 1 362 ALA 362 360 360 ALA ALA A . n A 1 363 HIS 363 361 361 HIS HIS A . n A 1 364 THR 364 362 362 THR THR A . n A 1 365 ASN 365 363 363 ASN ASN A . n A 1 366 ASP 366 364 364 ASP ASP A . n A 1 367 VAL 367 365 365 VAL VAL A . n A 1 368 LYS 368 366 366 LYS LYS A . n A 1 369 GLN 369 367 367 GLN GLN A . n A 1 370 LEU 370 368 368 LEU LEU A . n A 1 371 THR 371 369 369 THR THR A . n A 1 372 GLU 372 370 370 GLU GLU A . n A 1 373 ALA 373 371 371 ALA ALA A . n A 1 374 VAL 374 372 372 VAL VAL A . n A 1 375 GLN 375 373 373 GLN GLN A . n A 1 376 LYS 376 374 374 LYS LYS A . n A 1 377 ILE 377 375 375 ILE ILE A . n A 1 378 THR 378 376 376 THR THR A . n A 1 379 THR 379 377 377 THR THR A . n A 1 380 GLU 380 378 378 GLU GLU A . n A 1 381 SER 381 379 379 SER SER A . n A 1 382 ILE 382 380 380 ILE ILE A . n A 1 383 VAL 383 381 381 VAL VAL A . n A 1 384 ILE 384 382 382 ILE ILE A . n A 1 385 TRP 385 383 383 TRP TRP A . n A 1 386 GLY 386 384 384 GLY GLY A . n A 1 387 LYS 387 385 385 LYS LYS A . n A 1 388 THR 388 386 386 THR THR A . n A 1 389 PRO 389 387 387 PRO PRO A . n A 1 390 LYS 390 388 388 LYS LYS A . n A 1 391 PHE 391 389 389 PHE PHE A . n A 1 392 LYS 392 390 390 LYS LYS A . n A 1 393 LEU 393 391 391 LEU LEU A . n A 1 394 PRO 394 392 392 PRO PRO A . n A 1 395 ILE 395 393 393 ILE ILE A . n A 1 396 GLN 396 394 394 GLN GLN A . n A 1 397 LYS 397 395 395 LYS LYS A . n A 1 398 GLU 398 396 396 GLU GLU A . n A 1 399 THR 399 397 397 THR THR A . n A 1 400 TRP 400 398 398 TRP TRP A . n A 1 401 GLU 401 399 399 GLU GLU A . n A 1 402 THR 402 400 400 THR THR A . n A 1 403 TRP 403 401 401 TRP TRP A . n A 1 404 TRP 404 402 402 TRP TRP A . n A 1 405 THR 405 403 403 THR THR A . n A 1 406 GLU 406 404 404 GLU GLU A . n A 1 407 TYR 407 405 405 TYR TYR A . n A 1 408 TRP 408 406 406 TRP TRP A . n A 1 409 GLN 409 407 407 GLN GLN A . n A 1 410 ALA 410 408 408 ALA ALA A . n A 1 411 THR 411 409 409 THR THR A . n A 1 412 TRP 412 410 410 TRP TRP A . n A 1 413 ILE 413 411 411 ILE ILE A . n A 1 414 PRO 414 412 412 PRO PRO A . n A 1 415 GLU 415 413 413 GLU GLU A . n A 1 416 TRP 416 414 414 TRP TRP A . n A 1 417 GLU 417 415 415 GLU GLU A . n A 1 418 PHE 418 416 416 PHE PHE A . n A 1 419 VAL 419 417 417 VAL VAL A . n A 1 420 ASN 420 418 418 ASN ASN A . n A 1 421 THR 421 419 419 THR THR A . n A 1 422 PRO 422 420 420 PRO PRO A . n A 1 423 PRO 423 421 421 PRO PRO A . n A 1 424 LEU 424 422 422 LEU LEU A . n A 1 425 VAL 425 423 423 VAL VAL A . n A 1 426 LYS 426 424 424 LYS LYS A . n A 1 427 LEU 427 425 425 LEU LEU A . n A 1 428 TRP 428 426 426 TRP TRP A . n A 1 429 TYR 429 427 427 TYR TYR A . n A 1 430 GLN 430 428 428 GLN GLN A . n A 1 431 LEU 431 429 429 LEU LEU A . n A 1 432 GLU 432 430 430 GLU GLU A . n A 1 433 LYS 433 431 431 LYS LYS A . n A 1 434 GLU 434 432 432 GLU GLU A . n A 1 435 PRO 435 433 433 PRO PRO A . n A 1 436 ILE 436 434 434 ILE ILE A . n A 1 437 VAL 437 435 435 VAL VAL A . n A 1 438 GLY 438 436 436 GLY GLY A . n A 1 439 ALA 439 437 437 ALA ALA A . n A 1 440 GLU 440 438 438 GLU GLU A . n A 1 441 THR 441 439 439 THR THR A . n A 1 442 PHE 442 440 440 PHE PHE A . n A 1 443 TYR 443 441 441 TYR TYR A . n A 1 444 VAL 444 442 442 VAL VAL A . n A 1 445 ASP 445 443 443 ASP ASP A . n A 1 446 GLY 446 444 444 GLY GLY A . n A 1 447 ALA 447 445 445 ALA ALA A . n A 1 448 ALA 448 446 446 ALA ALA A . n A 1 449 ASN 449 447 447 ASN ASN A . n A 1 450 ARG 450 448 448 ARG ARG A . n A 1 451 GLU 451 449 449 GLU GLU A . n A 1 452 THR 452 450 450 THR THR A . n A 1 453 LYS 453 451 451 LYS LYS A . n A 1 454 LEU 454 452 452 LEU LEU A . n A 1 455 GLY 455 453 453 GLY GLY A . n A 1 456 LYS 456 454 454 LYS LYS A . n A 1 457 ALA 457 455 455 ALA ALA A . n A 1 458 GLY 458 456 456 GLY GLY A . n A 1 459 TYR 459 457 457 TYR TYR A . n A 1 460 VAL 460 458 458 VAL VAL A . n A 1 461 THR 461 459 459 THR THR A . n A 1 462 ASN 462 460 460 ASN ASN A . n A 1 463 LYS 463 461 461 LYS LYS A . n A 1 464 GLY 464 462 462 GLY GLY A . n A 1 465 ARG 465 463 463 ARG ARG A . n A 1 466 GLN 466 464 464 GLN GLN A . n A 1 467 LYS 467 465 465 LYS LYS A . n A 1 468 VAL 468 466 466 VAL VAL A . n A 1 469 VAL 469 467 467 VAL VAL A . n A 1 470 PRO 470 468 468 PRO PRO A . n A 1 471 LEU 471 469 469 LEU LEU A . n A 1 472 THR 472 470 470 THR THR A . n A 1 473 ASN 473 471 471 ASN ASN A . n A 1 474 THR 474 472 472 THR THR A . n A 1 475 THR 475 473 473 THR THR A . n A 1 476 ASN 476 474 474 ASN ASN A . n A 1 477 GLN 477 475 475 GLN GLN A . n A 1 478 LYS 478 476 476 LYS LYS A . n A 1 479 THR 479 477 477 THR THR A . n A 1 480 GLU 480 478 478 GLU GLU A . n A 1 481 LEU 481 479 479 LEU LEU A . n A 1 482 GLN 482 480 480 GLN GLN A . n A 1 483 ALA 483 481 481 ALA ALA A . n A 1 484 ILE 484 482 482 ILE ILE A . n A 1 485 TYR 485 483 483 TYR TYR A . n A 1 486 LEU 486 484 484 LEU LEU A . n A 1 487 ALA 487 485 485 ALA ALA A . n A 1 488 LEU 488 486 486 LEU LEU A . n A 1 489 GLN 489 487 487 GLN GLN A . n A 1 490 ASP 490 488 488 ASP ASP A . n A 1 491 SER 491 489 489 SER SER A . n A 1 492 GLY 492 490 490 GLY GLY A . n A 1 493 LEU 493 491 491 LEU LEU A . n A 1 494 GLU 494 492 492 GLU GLU A . n A 1 495 VAL 495 493 493 VAL VAL A . n A 1 496 ASN 496 494 494 ASN ASN A . n A 1 497 ILE 497 495 495 ILE ILE A . n A 1 498 VAL 498 496 496 VAL VAL A . n A 1 499 THR 499 497 497 THR THR A . n A 1 500 ASN 500 498 498 ASN ASN A . n A 1 501 SER 501 499 499 SER SER A . n A 1 502 GLN 502 500 500 GLN GLN A . n A 1 503 TYR 503 501 501 TYR TYR A . n A 1 504 ALA 504 502 502 ALA ALA A . n A 1 505 LEU 505 503 503 LEU LEU A . n A 1 506 GLY 506 504 504 GLY GLY A . n A 1 507 ILE 507 505 505 ILE ILE A . n A 1 508 ILE 508 506 506 ILE ILE A . n A 1 509 GLN 509 507 507 GLN GLN A . n A 1 510 ALA 510 508 508 ALA ALA A . n A 1 511 GLN 511 509 509 GLN GLN A . n A 1 512 PRO 512 510 510 PRO PRO A . n A 1 513 ASP 513 511 511 ASP ASP A . n A 1 514 LYS 514 512 512 LYS LYS A . n A 1 515 SER 515 513 513 SER SER A . n A 1 516 GLU 516 514 514 GLU GLU A . n A 1 517 SER 517 515 515 SER SER A . n A 1 518 GLU 518 516 516 GLU GLU A . n A 1 519 LEU 519 517 517 LEU LEU A . n A 1 520 VAL 520 518 518 VAL VAL A . n A 1 521 ASN 521 519 519 ASN ASN A . n A 1 522 GLN 522 520 520 GLN GLN A . n A 1 523 ILE 523 521 521 ILE ILE A . n A 1 524 ILE 524 522 522 ILE ILE A . n A 1 525 GLU 525 523 523 GLU GLU A . n A 1 526 GLN 526 524 524 GLN GLN A . n A 1 527 LEU 527 525 525 LEU LEU A . n A 1 528 ILE 528 526 526 ILE ILE A . n A 1 529 LYS 529 527 527 LYS LYS A . n A 1 530 LYS 530 528 528 LYS LYS A . n A 1 531 GLU 531 529 529 GLU GLU A . n A 1 532 LYS 532 530 530 LYS LYS A . n A 1 533 VAL 533 531 531 VAL VAL A . n A 1 534 TYR 534 532 532 TYR TYR A . n A 1 535 LEU 535 533 533 LEU LEU A . n A 1 536 ALA 536 534 534 ALA ALA A . n A 1 537 TRP 537 535 535 TRP TRP A . n A 1 538 VAL 538 536 536 VAL VAL A . n A 1 539 PRO 539 537 537 PRO PRO A . n A 1 540 ALA 540 538 538 ALA ALA A . n A 1 541 HIS 541 539 539 HIS HIS A . n A 1 542 LYS 542 540 540 LYS LYS A . n A 1 543 GLY 543 541 541 GLY GLY A . n A 1 544 ILE 544 542 542 ILE ILE A . n A 1 545 GLY 545 543 543 GLY GLY A . n A 1 546 GLY 546 544 544 GLY GLY A . n A 1 547 ASN 547 545 545 ASN ASN A . n A 1 548 GLU 548 546 546 GLU GLU A . n A 1 549 GLN 549 547 547 GLN GLN A . n A 1 550 VAL 550 548 548 VAL VAL A . n A 1 551 ASP 551 549 549 ASP ASP A . n A 1 552 LYS 552 550 ? ? ? A . n A 1 553 LEU 553 551 ? ? ? A . n A 1 554 VAL 554 552 ? ? ? A . n A 1 555 SER 555 553 ? ? ? A . n A 1 556 ALA 556 554 ? ? ? A . n A 1 557 GLY 557 555 ? ? ? A . n B 2 1 MET 1 -15 ? ? ? B . n B 2 2 ALA 2 -14 ? ? ? B . n B 2 3 HIS 3 -13 ? ? ? B . n B 2 4 HIS 4 -12 ? ? ? B . n B 2 5 HIS 5 -11 ? ? ? B . n B 2 6 HIS 6 -10 ? ? ? B . n B 2 7 HIS 7 -9 ? ? ? B . n B 2 8 HIS 8 -8 ? ? ? B . n B 2 9 ALA 9 -7 ? ? ? B . n B 2 10 LEU 10 -6 ? ? ? B . n B 2 11 GLU 11 -5 ? ? ? B . n B 2 12 VAL 12 -4 ? ? ? B . n B 2 13 LEU 13 -3 ? ? ? B . n B 2 14 PHE 14 -2 ? ? ? B . n B 2 15 GLN 15 -1 ? ? ? B . n B 2 16 GLY 16 0 ? ? ? B . n B 2 17 PRO 17 1 ? ? ? B . n B 2 18 ILE 18 2 ? ? ? B . n B 2 19 SER 19 3 ? ? ? B . n B 2 20 PRO 20 4 ? ? ? B . n B 2 21 ILE 21 5 ? ? ? B . n B 2 22 GLU 22 6 ? ? ? B . n B 2 23 THR 23 7 7 THR THR B . n B 2 24 VAL 24 8 8 VAL VAL B . n B 2 25 PRO 25 9 9 PRO PRO B . n B 2 26 VAL 26 10 10 VAL VAL B . n B 2 27 LYS 27 11 11 LYS LYS B . n B 2 28 LEU 28 12 12 LEU LEU B . n B 2 29 LYS 29 13 13 LYS LYS B . n B 2 30 PRO 30 14 14 PRO PRO B . n B 2 31 GLY 31 15 15 GLY GLY B . n B 2 32 MET 32 16 16 MET MET B . n B 2 33 ASP 33 17 17 ASP ASP B . n B 2 34 GLY 34 18 18 GLY GLY B . n B 2 35 PRO 35 19 19 PRO PRO B . n B 2 36 LYS 36 20 20 LYS LYS B . n B 2 37 VAL 37 21 21 VAL VAL B . n B 2 38 LYS 38 22 22 LYS LYS B . n B 2 39 GLN 39 23 23 GLN GLN B . n B 2 40 TRP 40 24 24 TRP TRP B . n B 2 41 PRO 41 25 25 PRO PRO B . n B 2 42 LEU 42 26 26 LEU LEU B . n B 2 43 THR 43 27 27 THR THR B . n B 2 44 GLU 44 28 28 GLU GLU B . n B 2 45 GLU 45 29 29 GLU GLU B . n B 2 46 LYS 46 30 30 LYS LYS B . n B 2 47 ILE 47 31 31 ILE ILE B . n B 2 48 LYS 48 32 32 LYS LYS B . n B 2 49 ALA 49 33 33 ALA ALA B . n B 2 50 LEU 50 34 34 LEU LEU B . n B 2 51 VAL 51 35 35 VAL VAL B . n B 2 52 GLU 52 36 36 GLU GLU B . n B 2 53 ILE 53 37 37 ILE ILE B . n B 2 54 CYS 54 38 38 CYS CYS B . n B 2 55 THR 55 39 39 THR THR B . n B 2 56 GLU 56 40 40 GLU GLU B . n B 2 57 MET 57 41 41 MET MET B . n B 2 58 GLU 58 42 42 GLU GLU B . n B 2 59 LYS 59 43 43 LYS LYS B . n B 2 60 GLU 60 44 44 GLU GLU B . n B 2 61 GLY 61 45 45 GLY GLY B . n B 2 62 LYS 62 46 46 LYS LYS B . n B 2 63 ILE 63 47 47 ILE ILE B . n B 2 64 SER 64 48 48 SER SER B . n B 2 65 LYS 65 49 49 LYS LYS B . n B 2 66 ILE 66 50 50 ILE ILE B . n B 2 67 GLY 67 51 51 GLY GLY B . n B 2 68 PRO 68 52 52 PRO PRO B . n B 2 69 GLU 69 53 53 GLU GLU B . n B 2 70 ASN 70 54 54 ASN ASN B . n B 2 71 PRO 71 55 55 PRO PRO B . n B 2 72 TYR 72 56 56 TYR TYR B . n B 2 73 ASN 73 57 57 ASN ASN B . n B 2 74 THR 74 58 58 THR THR B . n B 2 75 PRO 75 59 59 PRO PRO B . n B 2 76 VAL 76 60 60 VAL VAL B . n B 2 77 PHE 77 61 61 PHE PHE B . n B 2 78 ALA 78 62 62 ALA ALA B . n B 2 79 ILE 79 63 63 ILE ILE B . n B 2 80 LYS 80 64 64 LYS LYS B . n B 2 81 LYS 81 65 65 LYS LYS B . n B 2 82 LYS 82 66 66 LYS LYS B . n B 2 83 ASP 83 67 67 ASP ASP B . n B 2 84 SER 84 68 68 SER SER B . n B 2 85 THR 85 69 69 THR THR B . n B 2 86 LYS 86 70 70 LYS LYS B . n B 2 87 TRP 87 71 71 TRP TRP B . n B 2 88 ARG 88 72 72 ARG ARG B . n B 2 89 LYS 89 73 73 LYS LYS B . n B 2 90 LEU 90 74 74 LEU LEU B . n B 2 91 VAL 91 75 75 VAL VAL B . n B 2 92 ASP 92 76 76 ASP ASP B . n B 2 93 PHE 93 77 77 PHE PHE B . n B 2 94 ARG 94 78 78 ARG ARG B . n B 2 95 GLU 95 79 79 GLU GLU B . n B 2 96 LEU 96 80 80 LEU LEU B . n B 2 97 ASN 97 81 81 ASN ASN B . n B 2 98 LYS 98 82 82 LYS LYS B . n B 2 99 ARG 99 83 83 ARG ARG B . n B 2 100 THR 100 84 84 THR THR B . n B 2 101 GLN 101 85 85 GLN GLN B . n B 2 102 ASP 102 86 86 ASP ASP B . n B 2 103 PHE 103 87 ? ? ? B . n B 2 104 TRP 104 88 ? ? ? B . n B 2 105 GLU 105 89 ? ? ? B . n B 2 106 VAL 106 90 ? ? ? B . n B 2 107 GLN 107 91 ? ? ? B . n B 2 108 LEU 108 92 ? ? ? B . n B 2 109 GLY 109 93 ? ? ? B . n B 2 110 ILE 110 94 ? ? ? B . n B 2 111 PRO 111 95 95 PRO PRO B . n B 2 112 HIS 112 96 96 HIS HIS B . n B 2 113 PRO 113 97 97 PRO PRO B . n B 2 114 ALA 114 98 98 ALA ALA B . n B 2 115 GLY 115 99 99 GLY GLY B . n B 2 116 LEU 116 100 100 LEU LEU B . n B 2 117 LYS 117 101 101 LYS LYS B . n B 2 118 LYS 118 102 102 LYS LYS B . n B 2 119 LYS 119 103 103 LYS LYS B . n B 2 120 LYS 120 104 104 LYS LYS B . n B 2 121 SER 121 105 105 SER SER B . n B 2 122 VAL 122 106 106 VAL VAL B . n B 2 123 THR 123 107 107 THR THR B . n B 2 124 VAL 124 108 108 VAL VAL B . n B 2 125 LEU 125 109 109 LEU LEU B . n B 2 126 ASP 126 110 110 ASP ASP B . n B 2 127 VAL 127 111 111 VAL VAL B . n B 2 128 GLY 128 112 112 GLY GLY B . n B 2 129 ASP 129 113 113 ASP ASP B . n B 2 130 ALA 130 114 114 ALA ALA B . n B 2 131 TYR 131 115 115 TYR TYR B . n B 2 132 PHE 132 116 116 PHE PHE B . n B 2 133 SER 133 117 117 SER SER B . n B 2 134 VAL 134 118 118 VAL VAL B . n B 2 135 PRO 135 119 119 PRO PRO B . n B 2 136 LEU 136 120 120 LEU LEU B . n B 2 137 ASP 137 121 121 ASP ASP B . n B 2 138 GLU 138 122 122 GLU GLU B . n B 2 139 ASP 139 123 123 ASP ASP B . n B 2 140 PHE 140 124 124 PHE PHE B . n B 2 141 ARG 141 125 125 ARG ARG B . n B 2 142 LYS 142 126 126 LYS LYS B . n B 2 143 TYR 143 127 127 TYR TYR B . n B 2 144 THR 144 128 128 THR THR B . n B 2 145 ALA 145 129 129 ALA ALA B . n B 2 146 PHE 146 130 130 PHE PHE B . n B 2 147 THR 147 131 131 THR THR B . n B 2 148 ILE 148 132 132 ILE ILE B . n B 2 149 PRO 149 133 133 PRO PRO B . n B 2 150 SER 150 134 134 SER SER B . n B 2 151 ILE 151 135 135 ILE ILE B . n B 2 152 ASN 152 136 136 ASN ASN B . n B 2 153 ASN 153 137 137 ASN ASN B . n B 2 154 GLU 154 138 138 GLU GLU B . n B 2 155 THR 155 139 139 THR THR B . n B 2 156 PRO 156 140 140 PRO PRO B . n B 2 157 GLY 157 141 141 GLY GLY B . n B 2 158 ILE 158 142 142 ILE ILE B . n B 2 159 ARG 159 143 143 ARG ARG B . n B 2 160 TYR 160 144 144 TYR TYR B . n B 2 161 GLN 161 145 145 GLN GLN B . n B 2 162 TYR 162 146 146 TYR TYR B . n B 2 163 ASN 163 147 147 ASN ASN B . n B 2 164 VAL 164 148 148 VAL VAL B . n B 2 165 LEU 165 149 149 LEU LEU B . n B 2 166 PRO 166 150 150 PRO PRO B . n B 2 167 GLN 167 151 151 GLN GLN B . n B 2 168 GLY 168 152 152 GLY GLY B . n B 2 169 TRP 169 153 153 TRP TRP B . n B 2 170 LYS 170 154 154 LYS LYS B . n B 2 171 GLY 171 155 155 GLY GLY B . n B 2 172 SER 172 156 156 SER SER B . n B 2 173 PRO 173 157 157 PRO PRO B . n B 2 174 ALA 174 158 158 ALA ALA B . n B 2 175 ILE 175 159 159 ILE ILE B . n B 2 176 PHE 176 160 160 PHE PHE B . n B 2 177 GLN 177 161 161 GLN GLN B . n B 2 178 SER 178 162 162 SER SER B . n B 2 179 SER 179 163 163 SER SER B . n B 2 180 MET 180 164 164 MET MET B . n B 2 181 THR 181 165 165 THR THR B . n B 2 182 LYS 182 166 166 LYS LYS B . n B 2 183 ILE 183 167 167 ILE ILE B . n B 2 184 LEU 184 168 168 LEU LEU B . n B 2 185 GLU 185 169 169 GLU GLU B . n B 2 186 PRO 186 170 170 PRO PRO B . n B 2 187 PHE 187 171 171 PHE PHE B . n B 2 188 LYS 188 172 172 LYS LYS B . n B 2 189 LYS 189 173 173 LYS LYS B . n B 2 190 GLN 190 174 174 GLN GLN B . n B 2 191 ASN 191 175 175 ASN ASN B . n B 2 192 PRO 192 176 176 PRO PRO B . n B 2 193 ASP 193 177 177 ASP ASP B . n B 2 194 ILE 194 178 178 ILE ILE B . n B 2 195 VAL 195 179 179 VAL VAL B . n B 2 196 ILE 196 180 180 ILE ILE B . n B 2 197 TYR 197 181 181 TYR TYR B . n B 2 198 GLN 198 182 182 GLN GLN B . n B 2 199 TYR 199 183 183 TYR TYR B . n B 2 200 MET 200 184 184 MET MET B . n B 2 201 ASP 201 185 185 ASP ASP B . n B 2 202 ASP 202 186 186 ASP ASP B . n B 2 203 LEU 203 187 187 LEU LEU B . n B 2 204 TYR 204 188 188 TYR TYR B . n B 2 205 VAL 205 189 189 VAL VAL B . n B 2 206 GLY 206 190 190 GLY GLY B . n B 2 207 SER 207 191 191 SER SER B . n B 2 208 ASP 208 192 192 ASP ASP B . n B 2 209 LEU 209 193 193 LEU LEU B . n B 2 210 GLU 210 194 194 GLU GLU B . n B 2 211 ILE 211 195 195 ILE ILE B . n B 2 212 GLY 212 196 196 GLY GLY B . n B 2 213 GLN 213 197 197 GLN GLN B . n B 2 214 HIS 214 198 198 HIS HIS B . n B 2 215 ARG 215 199 199 ARG ARG B . n B 2 216 THR 216 200 200 THR THR B . n B 2 217 LYS 217 201 201 LYS LYS B . n B 2 218 ILE 218 202 202 ILE ILE B . n B 2 219 GLU 219 203 203 GLU GLU B . n B 2 220 GLU 220 204 204 GLU GLU B . n B 2 221 LEU 221 205 205 LEU LEU B . n B 2 222 ARG 222 206 206 ARG ARG B . n B 2 223 GLN 223 207 207 GLN GLN B . n B 2 224 HIS 224 208 208 HIS HIS B . n B 2 225 LEU 225 209 209 LEU LEU B . n B 2 226 LEU 226 210 210 LEU LEU B . n B 2 227 ARG 227 211 ? ? ? B . n B 2 228 TRP 228 212 ? ? ? B . n B 2 229 GLY 229 213 ? ? ? B . n B 2 230 LEU 230 214 ? ? ? B . n B 2 231 THR 231 215 ? ? ? B . n B 2 232 THR 232 216 ? ? ? B . n B 2 233 PRO 233 217 ? ? ? B . n B 2 234 ASP 234 218 ? ? ? B . n B 2 235 LYS 235 219 ? ? ? B . n B 2 236 LYS 236 220 ? ? ? B . n B 2 237 HIS 237 221 ? ? ? B . n B 2 238 GLN 238 222 ? ? ? B . n B 2 239 LYS 239 223 ? ? ? B . n B 2 240 GLU 240 224 ? ? ? B . n B 2 241 PRO 241 225 ? ? ? B . n B 2 242 PRO 242 226 ? ? ? B . n B 2 243 PHE 243 227 ? ? ? B . n B 2 244 LEU 244 228 ? ? ? B . n B 2 245 TRP 245 229 ? ? ? B . n B 2 246 MET 246 230 ? ? ? B . n B 2 247 GLY 247 231 ? ? ? B . n B 2 248 TYR 248 232 ? ? ? B . n B 2 249 GLU 249 233 ? ? ? B . n B 2 250 LEU 250 234 234 LEU LEU B . n B 2 251 HIS 251 235 235 HIS HIS B . n B 2 252 PRO 252 236 236 PRO PRO B . n B 2 253 ASP 253 237 237 ASP ASP B . n B 2 254 LYS 254 238 238 LYS LYS B . n B 2 255 TRP 255 239 239 TRP TRP B . n B 2 256 THR 256 240 240 THR THR B . n B 2 257 VAL 257 241 241 VAL VAL B . n B 2 258 GLN 258 242 242 GLN GLN B . n B 2 259 PRO 259 243 243 PRO PRO B . n B 2 260 ILE 260 244 244 ILE ILE B . n B 2 261 VAL 261 245 245 VAL VAL B . n B 2 262 LEU 262 246 246 LEU LEU B . n B 2 263 PRO 263 247 247 PRO PRO B . n B 2 264 GLU 264 248 248 GLU GLU B . n B 2 265 LYS 265 249 249 LYS LYS B . n B 2 266 ASP 266 250 250 ASP ASP B . n B 2 267 SER 267 251 251 SER SER B . n B 2 268 TRP 268 252 252 TRP TRP B . n B 2 269 THR 269 253 253 THR THR B . n B 2 270 VAL 270 254 254 VAL VAL B . n B 2 271 ASN 271 255 255 ASN ASN B . n B 2 272 ASP 272 256 256 ASP ASP B . n B 2 273 ILE 273 257 257 ILE ILE B . n B 2 274 GLN 274 258 258 GLN GLN B . n B 2 275 LYS 275 259 259 LYS LYS B . n B 2 276 LEU 276 260 260 LEU LEU B . n B 2 277 VAL 277 261 261 VAL VAL B . n B 2 278 GLY 278 262 262 GLY GLY B . n B 2 279 LYS 279 263 263 LYS LYS B . n B 2 280 LEU 280 264 264 LEU LEU B . n B 2 281 ASN 281 265 265 ASN ASN B . n B 2 282 TRP 282 266 266 TRP TRP B . n B 2 283 ALA 283 267 267 ALA ALA B . n B 2 284 SER 284 268 268 SER SER B . n B 2 285 GLN 285 269 269 GLN GLN B . n B 2 286 ILE 286 270 270 ILE ILE B . n B 2 287 TYR 287 271 271 TYR TYR B . n B 2 288 PRO 288 272 272 PRO PRO B . n B 2 289 GLY 289 273 273 GLY GLY B . n B 2 290 ILE 290 274 274 ILE ILE B . n B 2 291 LYS 291 275 275 LYS LYS B . n B 2 292 VAL 292 276 276 VAL VAL B . n B 2 293 ARG 293 277 277 ARG ARG B . n B 2 294 GLN 294 278 278 GLN GLN B . n B 2 295 LEU 295 279 279 LEU LEU B . n B 2 296 CYS 296 280 280 CYS CYS B . n B 2 297 LYS 297 281 281 LYS LYS B . n B 2 298 LEU 298 282 282 LEU LEU B . n B 2 299 LEU 299 283 283 LEU LEU B . n B 2 300 ARG 300 284 284 ARG ARG B . n B 2 301 GLY 301 285 285 GLY GLY B . n B 2 302 THR 302 286 286 THR THR B . n B 2 303 LYS 303 287 287 LYS LYS B . n B 2 304 ALA 304 288 288 ALA ALA B . n B 2 305 LEU 305 289 289 LEU LEU B . n B 2 306 THR 306 290 290 THR THR B . n B 2 307 GLU 307 291 291 GLU GLU B . n B 2 308 VAL 308 292 292 VAL VAL B . n B 2 309 ILE 309 293 293 ILE ILE B . n B 2 310 PRO 310 294 294 PRO PRO B . n B 2 311 LEU 311 295 295 LEU LEU B . n B 2 312 THR 312 296 296 THR THR B . n B 2 313 GLU 313 297 297 GLU GLU B . n B 2 314 GLU 314 298 298 GLU GLU B . n B 2 315 ALA 315 299 299 ALA ALA B . n B 2 316 GLU 316 300 300 GLU GLU B . n B 2 317 LEU 317 301 301 LEU LEU B . n B 2 318 GLU 318 302 302 GLU GLU B . n B 2 319 LEU 319 303 303 LEU LEU B . n B 2 320 ALA 320 304 304 ALA ALA B . n B 2 321 GLU 321 305 305 GLU GLU B . n B 2 322 ASN 322 306 306 ASN ASN B . n B 2 323 ARG 323 307 307 ARG ARG B . n B 2 324 GLU 324 308 308 GLU GLU B . n B 2 325 ILE 325 309 309 ILE ILE B . n B 2 326 LEU 326 310 310 LEU LEU B . n B 2 327 LYS 327 311 311 LYS LYS B . n B 2 328 GLU 328 312 312 GLU GLU B . n B 2 329 PRO 329 313 313 PRO PRO B . n B 2 330 VAL 330 314 314 VAL VAL B . n B 2 331 HIS 331 315 315 HIS HIS B . n B 2 332 GLY 332 316 316 GLY GLY B . n B 2 333 VAL 333 317 317 VAL VAL B . n B 2 334 TYR 334 318 318 TYR TYR B . n B 2 335 TYR 335 319 319 TYR TYR B . n B 2 336 ASP 336 320 320 ASP ASP B . n B 2 337 PRO 337 321 321 PRO PRO B . n B 2 338 SER 338 322 322 SER SER B . n B 2 339 LYS 339 323 323 LYS LYS B . n B 2 340 ASP 340 324 324 ASP ASP B . n B 2 341 LEU 341 325 325 LEU LEU B . n B 2 342 ILE 342 326 326 ILE ILE B . n B 2 343 ALA 343 327 327 ALA ALA B . n B 2 344 GLU 344 328 328 GLU GLU B . n B 2 345 ILE 345 329 329 ILE ILE B . n B 2 346 GLN 346 330 330 GLN GLN B . n B 2 347 LYS 347 331 331 LYS LYS B . n B 2 348 GLN 348 332 332 GLN GLN B . n B 2 349 GLY 349 333 333 GLY GLY B . n B 2 350 GLN 350 334 334 GLN GLN B . n B 2 351 GLY 351 335 335 GLY GLY B . n B 2 352 GLN 352 336 336 GLN GLN B . n B 2 353 TRP 353 337 337 TRP TRP B . n B 2 354 THR 354 338 338 THR THR B . n B 2 355 TYR 355 339 339 TYR TYR B . n B 2 356 GLN 356 340 340 GLN GLN B . n B 2 357 ILE 357 341 341 ILE ILE B . n B 2 358 TYR 358 342 342 TYR TYR B . n B 2 359 GLN 359 343 343 GLN GLN B . n B 2 360 GLU 360 344 344 GLU GLU B . n B 2 361 PRO 361 345 345 PRO PRO B . n B 2 362 PHE 362 346 346 PHE PHE B . n B 2 363 LYS 363 347 347 LYS LYS B . n B 2 364 ASN 364 348 348 ASN ASN B . n B 2 365 LEU 365 349 349 LEU LEU B . n B 2 366 LYS 366 350 350 LYS LYS B . n B 2 367 THR 367 351 351 THR THR B . n B 2 368 GLY 368 352 352 GLY GLY B . n B 2 369 LYS 369 353 353 LYS LYS B . n B 2 370 TYR 370 354 354 TYR TYR B . n B 2 371 ALA 371 355 355 ALA ALA B . n B 2 372 ARG 372 356 356 ARG ARG B . n B 2 373 MET 373 357 357 MET MET B . n B 2 374 ARG 374 358 358 ARG ARG B . n B 2 375 GLY 375 359 359 GLY GLY B . n B 2 376 ALA 376 360 360 ALA ALA B . n B 2 377 HIS 377 361 361 HIS HIS B . n B 2 378 THR 378 362 362 THR THR B . n B 2 379 ASN 379 363 363 ASN ASN B . n B 2 380 ASP 380 364 364 ASP ASP B . n B 2 381 VAL 381 365 365 VAL VAL B . n B 2 382 LYS 382 366 366 LYS LYS B . n B 2 383 GLN 383 367 367 GLN GLN B . n B 2 384 LEU 384 368 368 LEU LEU B . n B 2 385 THR 385 369 369 THR THR B . n B 2 386 GLU 386 370 370 GLU GLU B . n B 2 387 ALA 387 371 371 ALA ALA B . n B 2 388 VAL 388 372 372 VAL VAL B . n B 2 389 GLN 389 373 373 GLN GLN B . n B 2 390 LYS 390 374 374 LYS LYS B . n B 2 391 ILE 391 375 375 ILE ILE B . n B 2 392 THR 392 376 376 THR THR B . n B 2 393 THR 393 377 377 THR THR B . n B 2 394 GLU 394 378 378 GLU GLU B . n B 2 395 SER 395 379 379 SER SER B . n B 2 396 ILE 396 380 380 ILE ILE B . n B 2 397 VAL 397 381 381 VAL VAL B . n B 2 398 ILE 398 382 382 ILE ILE B . n B 2 399 TRP 399 383 383 TRP TRP B . n B 2 400 GLY 400 384 384 GLY GLY B . n B 2 401 LYS 401 385 385 LYS LYS B . n B 2 402 THR 402 386 386 THR THR B . n B 2 403 PRO 403 387 387 PRO PRO B . n B 2 404 LYS 404 388 388 LYS LYS B . n B 2 405 PHE 405 389 389 PHE PHE B . n B 2 406 LYS 406 390 390 LYS LYS B . n B 2 407 LEU 407 391 391 LEU LEU B . n B 2 408 PRO 408 392 392 PRO PRO B . n B 2 409 ILE 409 393 393 ILE ILE B . n B 2 410 GLN 410 394 394 GLN GLN B . n B 2 411 LYS 411 395 395 LYS LYS B . n B 2 412 GLU 412 396 396 GLU GLU B . n B 2 413 THR 413 397 397 THR THR B . n B 2 414 TRP 414 398 398 TRP TRP B . n B 2 415 GLU 415 399 399 GLU GLU B . n B 2 416 THR 416 400 400 THR THR B . n B 2 417 TRP 417 401 401 TRP TRP B . n B 2 418 TRP 418 402 402 TRP TRP B . n B 2 419 THR 419 403 403 THR THR B . n B 2 420 GLU 420 404 404 GLU GLU B . n B 2 421 TYR 421 405 405 TYR TYR B . n B 2 422 TRP 422 406 406 TRP TRP B . n B 2 423 GLN 423 407 407 GLN GLN B . n B 2 424 ALA 424 408 408 ALA ALA B . n B 2 425 THR 425 409 409 THR THR B . n B 2 426 TRP 426 410 410 TRP TRP B . n B 2 427 ILE 427 411 411 ILE ILE B . n B 2 428 PRO 428 412 412 PRO PRO B . n B 2 429 GLU 429 413 413 GLU GLU B . n B 2 430 TRP 430 414 414 TRP TRP B . n B 2 431 GLU 431 415 415 GLU GLU B . n B 2 432 PHE 432 416 416 PHE PHE B . n B 2 433 VAL 433 417 417 VAL VAL B . n B 2 434 ASN 434 418 418 ASN ASN B . n B 2 435 THR 435 419 419 THR THR B . n B 2 436 PRO 436 420 420 PRO PRO B . n B 2 437 PRO 437 421 421 PRO PRO B . n B 2 438 LEU 438 422 422 LEU LEU B . n B 2 439 VAL 439 423 423 VAL VAL B . n B 2 440 LYS 440 424 424 LYS LYS B . n B 2 441 LEU 441 425 425 LEU LEU B . n B 2 442 TRP 442 426 426 TRP TRP B . n B 2 443 TYR 443 427 427 TYR TYR B . n B 2 444 GLN 444 428 ? ? ? B . n C 3 1 DT 1 -4 -4 DT DT F . n C 3 2 DA 2 -3 -3 DA DA F . n C 3 3 DA 3 -2 -2 DA DA F . n C 3 4 DT 4 -1 -1 DT DT F . n C 3 5 DT 5 0 0 DT DT F . n C 3 6 DC 6 1 1 DC DC F . n C 3 7 OMC 7 2 2 OMC OMC F . n C 3 8 DC 8 3 3 DC DC F . n C 3 9 OMC 9 4 4 OMC OMC F . n C 3 10 DC 10 5 5 DC DC F . n C 3 11 DC 11 6 6 DC DC F . n C 3 12 DC 12 7 7 DC DC F . n C 3 13 DT 13 8 8 DT DT F . n C 3 14 DT 14 9 9 DT DT F . n C 3 15 DC 15 10 10 DC DC F . n C 3 16 DG 16 11 11 DG DG F . n C 3 17 DG 17 12 12 DG DG F . n C 3 18 DT 18 13 13 DT DT F . n C 3 19 DG 19 14 14 DG DG F . n C 3 20 DC 20 15 15 DC DC F . n C 3 21 DT 21 16 16 DT DT F . n C 3 22 DT 22 17 17 DT DT F . n C 3 23 DT 23 18 18 DT DT F . n C 3 24 DG 24 19 19 DG DG F . n C 3 25 DC 25 20 20 DC DC F . n C 3 26 DA 26 21 21 DA DA F . n C 3 27 DC 27 22 22 DC DC F . n C 3 28 DC 28 23 23 DC DC F . n C 3 29 DG 29 24 24 DG DG F . n C 3 30 DA 30 25 25 DA DA F . n C 3 31 DA 31 26 26 DA DA F . n C 3 32 DG 32 27 27 DG DG F . n C 3 33 DG 33 28 28 DG DG F . n C 3 34 DG 34 29 29 DG DG F . n C 3 35 DG 35 30 30 DG DG F . n C 3 36 DG 36 31 31 DG DG F . n C 3 37 DG 37 32 32 DG DG F . n C 3 38 DG 38 33 33 DG DG F . n C 3 39 DA 39 34 34 DA DA F . n C 3 40 DA 40 35 35 DA DA F . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 DTP ? ? DTP ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? 3 POP ? ? POP ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DTP 1 601 601 DTP DTP A . E 5 POP 1 602 701 POP POP A . F 6 MG 1 603 1 MG MG A . G 6 MG 1 604 3 MG MG A . H 6 MG 1 101 2 MG MG F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 66 ? CG ? A LYS 68 CG 2 1 Y 1 A LYS 66 ? CD ? A LYS 68 CD 3 1 Y 1 A LYS 66 ? CE ? A LYS 68 CE 4 1 Y 1 A LYS 66 ? NZ ? A LYS 68 NZ 5 1 Y 1 A ASN 136 ? CG ? A ASN 138 CG 6 1 Y 1 A ASN 136 ? OD1 ? A ASN 138 OD1 7 1 Y 1 A ASN 136 ? ND2 ? A ASN 138 ND2 8 1 Y 1 A ASN 137 ? CG ? A ASN 139 CG 9 1 Y 1 A ASN 137 ? OD1 ? A ASN 139 OD1 10 1 Y 1 A ASN 137 ? ND2 ? A ASN 139 ND2 11 1 Y 1 A GLU 138 ? CG ? A GLU 140 CG 12 1 Y 1 A GLU 138 ? CD ? A GLU 140 CD 13 1 Y 1 A GLU 138 ? OE1 ? A GLU 140 OE1 14 1 Y 1 A GLU 138 ? OE2 ? A GLU 140 OE2 15 1 Y 1 A LYS 454 ? CG ? A LYS 456 CG 16 1 Y 1 A LYS 454 ? CD ? A LYS 456 CD 17 1 Y 1 A LYS 454 ? CE ? A LYS 456 CE 18 1 Y 1 A LYS 454 ? NZ ? A LYS 456 NZ 19 1 Y 1 A HIS 539 ? CG ? A HIS 541 CG 20 1 Y 1 A HIS 539 ? ND1 ? A HIS 541 ND1 21 1 Y 1 A HIS 539 ? CD2 ? A HIS 541 CD2 22 1 Y 1 A HIS 539 ? CE1 ? A HIS 541 CE1 23 1 Y 1 A HIS 539 ? NE2 ? A HIS 541 NE2 24 1 Y 1 B LYS 66 ? CG ? B LYS 82 CG 25 1 Y 1 B LYS 66 ? CD ? B LYS 82 CD 26 1 Y 1 B LYS 66 ? CE ? B LYS 82 CE 27 1 Y 1 B LYS 66 ? NZ ? B LYS 82 NZ 28 1 Y 1 B GLN 85 ? CG ? B GLN 101 CG 29 1 Y 1 B GLN 85 ? CD ? B GLN 101 CD 30 1 Y 1 B GLN 85 ? OE1 ? B GLN 101 OE1 31 1 Y 1 B GLN 85 ? NE2 ? B GLN 101 NE2 32 1 Y 1 B LYS 104 ? CG ? B LYS 120 CG 33 1 Y 1 B LYS 104 ? CD ? B LYS 120 CD 34 1 Y 1 B LYS 104 ? CE ? B LYS 120 CE 35 1 Y 1 B LYS 104 ? NZ ? B LYS 120 NZ 36 1 Y 1 B ARG 206 ? CG ? B ARG 222 CG 37 1 Y 1 B ARG 206 ? CD ? B ARG 222 CD 38 1 Y 1 B ARG 206 ? NE ? B ARG 222 NE 39 1 Y 1 B ARG 206 ? CZ ? B ARG 222 CZ 40 1 Y 1 B ARG 206 ? NH1 ? B ARG 222 NH1 41 1 Y 1 B ARG 206 ? NH2 ? B ARG 222 NH2 42 1 Y 1 B LYS 249 ? CG ? B LYS 265 CG 43 1 Y 1 B LYS 249 ? CD ? B LYS 265 CD 44 1 Y 1 B LYS 249 ? CE ? B LYS 265 CE 45 1 Y 1 B LYS 249 ? NZ ? B LYS 265 NZ 46 1 Y 1 B LYS 311 ? CG ? B LYS 327 CG 47 1 Y 1 B LYS 311 ? CD ? B LYS 327 CD 48 1 Y 1 B LYS 311 ? CE ? B LYS 327 CE 49 1 Y 1 B LYS 311 ? NZ ? B LYS 327 NZ 50 1 Y 1 B ARG 356 ? CG ? B ARG 372 CG 51 1 Y 1 B ARG 356 ? CD ? B ARG 372 CD 52 1 Y 1 B ARG 356 ? NE ? B ARG 372 NE 53 1 Y 1 B ARG 356 ? CZ ? B ARG 372 CZ 54 1 Y 1 B ARG 356 ? NH1 ? B ARG 372 NH1 55 1 Y 1 B ARG 356 ? NH2 ? B ARG 372 NH2 56 1 Y 1 B MET 357 ? CG ? B MET 373 CG 57 1 Y 1 B MET 357 ? SD ? B MET 373 SD 58 1 Y 1 B MET 357 ? CE ? B MET 373 CE 59 1 Y 1 B ARG 358 ? CG ? B ARG 374 CG 60 1 Y 1 B ARG 358 ? CD ? B ARG 374 CD 61 1 Y 1 B ARG 358 ? NE ? B ARG 374 NE 62 1 Y 1 B ARG 358 ? CZ ? B ARG 374 CZ 63 1 Y 1 B ARG 358 ? NH1 ? B ARG 374 NH1 64 1 Y 1 B ARG 358 ? NH2 ? B ARG 374 NH2 65 1 Y 1 B LYS 374 ? CG ? B LYS 390 CG 66 1 Y 1 B LYS 374 ? CD ? B LYS 390 CD 67 1 Y 1 B LYS 374 ? CE ? B LYS 390 CE 68 1 Y 1 B LYS 374 ? NZ ? B LYS 390 NZ 69 1 Y 1 B LYS 424 ? CG ? B LYS 440 CG 70 1 Y 1 B LYS 424 ? CD ? B LYS 440 CD 71 1 Y 1 B LYS 424 ? CE ? B LYS 440 CE 72 1 Y 1 B LYS 424 ? NZ ? B LYS 440 NZ # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8VBF _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VBF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VBF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8VBF _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 8VBF _struct.title 'Kinetic intermediate states of HIV-1 RT DNA synthesis captured by cryo-EM' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VBF _struct_keywords.text 'Reverse Transcription, Time-resolved, HIV-1, Cryo-EM, TRANSCRIPTION, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords 'TRANSCRIPTION, TRANSFERASE/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP POL_HV1B1 P03366 ? 1 ;PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQ AIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAG ; 600 2 UNP POL_HV1B1 P03366 ? 2 ;PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET WWTEYWQATWIPEWEFVNTPPLVKLWYQ ; 600 3 PDB 8VBF 8VBF ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VBF A 3 ? 557 ? P03366 600 ? 1154 ? 1 555 2 2 8VBF B 17 ? 444 ? P03366 600 ? 1027 ? 1 428 3 3 8VBF F 1 ? 40 ? 8VBF -4 ? 35 ? -4 35 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8VBF MET A 1 ? UNP P03366 ? ? 'expression tag' -1 1 1 8VBF VAL A 2 ? UNP P03366 ? ? 'expression tag' 0 2 1 8VBF SER A 282 ? UNP P03366 CYS 879 'engineered mutation' 280 3 1 8VBF ASN A 500 ? UNP P03366 ASP 1097 'engineered mutation' 498 4 2 8VBF MET B 1 ? UNP P03366 ? ? 'expression tag' -15 5 2 8VBF ALA B 2 ? UNP P03366 ? ? 'expression tag' -14 6 2 8VBF HIS B 3 ? UNP P03366 ? ? 'expression tag' -13 7 2 8VBF HIS B 4 ? UNP P03366 ? ? 'expression tag' -12 8 2 8VBF HIS B 5 ? UNP P03366 ? ? 'expression tag' -11 9 2 8VBF HIS B 6 ? UNP P03366 ? ? 'expression tag' -10 10 2 8VBF HIS B 7 ? UNP P03366 ? ? 'expression tag' -9 11 2 8VBF HIS B 8 ? UNP P03366 ? ? 'expression tag' -8 12 2 8VBF ALA B 9 ? UNP P03366 ? ? 'expression tag' -7 13 2 8VBF LEU B 10 ? UNP P03366 ? ? 'expression tag' -6 14 2 8VBF GLU B 11 ? UNP P03366 ? ? 'expression tag' -5 15 2 8VBF VAL B 12 ? UNP P03366 ? ? 'expression tag' -4 16 2 8VBF LEU B 13 ? UNP P03366 ? ? 'expression tag' -3 17 2 8VBF PHE B 14 ? UNP P03366 ? ? 'expression tag' -2 18 2 8VBF GLN B 15 ? UNP P03366 ? ? 'expression tag' -1 19 2 8VBF GLY B 16 ? UNP P03366 ? ? 'expression tag' 0 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 29 ? GLU A 46 ? THR A 27 GLU A 44 1 ? 18 HELX_P HELX_P2 AA2 PHE A 79 ? THR A 86 ? PHE A 77 THR A 84 1 ? 8 HELX_P HELX_P3 AA3 HIS A 98 ? LEU A 102 ? HIS A 96 LEU A 100 5 ? 5 HELX_P HELX_P4 AA4 ALA A 116 ? VAL A 120 ? ALA A 114 VAL A 118 5 ? 5 HELX_P HELX_P5 AA5 ASP A 123 ? LYS A 128 ? ASP A 121 LYS A 126 1 ? 6 HELX_P HELX_P6 AA6 TYR A 129 ? ALA A 131 ? TYR A 127 ALA A 129 5 ? 3 HELX_P HELX_P7 AA7 GLY A 157 ? GLN A 176 ? GLY A 155 GLN A 174 1 ? 20 HELX_P HELX_P8 AA8 GLU A 196 ? TRP A 214 ? GLU A 194 TRP A 212 1 ? 19 HELX_P HELX_P9 AA9 PRO A 219 ? HIS A 223 ? PRO A 217 HIS A 221 5 ? 5 HELX_P HELX_P10 AB1 THR A 255 ? SER A 270 ? THR A 253 SER A 268 1 ? 16 HELX_P HELX_P11 AB2 VAL A 278 ? LYS A 283 ? VAL A 276 LYS A 281 1 ? 6 HELX_P HELX_P12 AB3 LEU A 284 ? ARG A 286 ? LEU A 282 ARG A 284 5 ? 3 HELX_P HELX_P13 AB4 THR A 298 ? GLU A 314 ? THR A 296 GLU A 312 1 ? 17 HELX_P HELX_P14 AB5 ASN A 365 ? TRP A 385 ? ASN A 363 TRP A 383 1 ? 21 HELX_P HELX_P15 AB6 GLN A 396 ? TYR A 407 ? GLN A 394 TYR A 405 1 ? 12 HELX_P HELX_P16 AB7 THR A 475 ? ASP A 490 ? THR A 473 ASP A 488 1 ? 16 HELX_P HELX_P17 AB8 SER A 501 ? GLN A 509 ? SER A 499 GLN A 507 1 ? 9 HELX_P HELX_P18 AB9 SER A 517 ? LYS A 530 ? SER A 515 LYS A 528 1 ? 14 HELX_P HELX_P19 AC1 GLY A 546 ? ASP A 551 ? GLY A 544 ASP A 549 1 ? 6 HELX_P HELX_P20 AC2 THR B 43 ? GLU B 60 ? THR B 27 GLU B 44 1 ? 18 HELX_P HELX_P21 AC3 PHE B 93 ? ARG B 99 ? PHE B 77 ARG B 83 1 ? 7 HELX_P HELX_P22 AC4 ASP B 129 ? VAL B 134 ? ASP B 113 VAL B 118 5 ? 6 HELX_P HELX_P23 AC5 ASP B 137 ? TYR B 143 ? ASP B 121 TYR B 127 5 ? 7 HELX_P HELX_P24 AC6 SER B 150 ? GLU B 154 ? SER B 134 GLU B 138 5 ? 5 HELX_P HELX_P25 AC7 GLY B 171 ? THR B 181 ? GLY B 155 THR B 165 1 ? 11 HELX_P HELX_P26 AC8 LEU B 184 ? LYS B 189 ? LEU B 168 LYS B 173 1 ? 6 HELX_P HELX_P27 AC9 GLU B 210 ? LEU B 226 ? GLU B 194 LEU B 210 1 ? 17 HELX_P HELX_P28 AD1 THR B 269 ? TYR B 287 ? THR B 253 TYR B 271 1 ? 19 HELX_P HELX_P29 AD2 VAL B 292 ? LYS B 297 ? VAL B 276 LYS B 281 1 ? 6 HELX_P HELX_P30 AD3 GLU B 313 ? LYS B 327 ? GLU B 297 LYS B 311 1 ? 15 HELX_P HELX_P31 AD4 ASN B 379 ? TRP B 399 ? ASN B 363 TRP B 383 1 ? 21 HELX_P HELX_P32 AD5 GLN B 410 ? TRP B 418 ? GLN B 394 TRP B 402 1 ? 9 HELX_P HELX_P33 AD6 THR B 419 ? TYR B 421 ? THR B 403 TYR B 405 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DC 6 "O3'" ? ? ? 1_555 C OMC 7 P ? ? F DC 1 F OMC 2 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? C OMC 7 "O3'" ? ? ? 1_555 C DC 8 P ? ? F OMC 2 F DC 3 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale3 covale both ? C DC 8 "O3'" ? ? ? 1_555 C OMC 9 P ? ? F DC 3 F OMC 4 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale4 covale both ? C OMC 9 "O3'" ? ? ? 1_555 C DC 10 P ? ? F OMC 4 F DC 5 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A ASP 112 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 110 A MG 603 1_555 ? ? ? ? ? ? ? 2.212 ? ? metalc2 metalc ? ? A ASP 112 OD1 ? ? ? 1_555 G MG . MG ? ? A ASP 110 A MG 604 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc3 metalc ? ? A VAL 113 O ? ? ? 1_555 F MG . MG ? ? A VAL 111 A MG 603 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc4 metalc ? ? A ASP 187 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 185 A MG 603 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc5 metalc ? ? A ASP 187 OD1 ? ? ? 1_555 G MG . MG ? ? A ASP 185 A MG 604 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc6 metalc ? ? D DTP . O3G A ? ? 1_555 F MG . MG ? ? A DTP 601 A MG 603 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc7 metalc ? ? D DTP . O1B A ? ? 1_555 F MG . MG ? ? A DTP 601 A MG 603 1_555 ? ? ? ? ? ? ? 2.483 ? ? metalc8 metalc ? ? D DTP . O1A A ? ? 1_555 F MG . MG ? ? A DTP 601 A MG 603 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc9 metalc ? ? D DTP . O1A A ? ? 1_555 G MG . MG ? ? A DTP 601 A MG 604 1_555 ? ? ? ? ? ? ? 2.476 ? ? metalc10 metalc ? ? E POP . O6 B ? ? 1_555 F MG . MG ? ? A POP 602 A MG 603 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc11 metalc ? ? F MG . MG ? ? ? 1_555 C DA 40 OP1 B ? A MG 603 F DA 35 1_555 ? ? ? ? ? ? ? 2.990 ? ? metalc12 metalc ? ? G MG . MG ? ? ? 1_555 C DA 39 "O3'" ? ? A MG 604 F DA 34 1_555 ? ? ? ? ? ? ? 2.726 ? ? metalc13 metalc ? ? G MG . MG ? ? ? 1_555 C DA 40 OP1 B ? A MG 604 F DA 35 1_555 ? ? ? ? ? ? ? 2.787 ? ? hydrog1 hydrog ? ? C DT 4 N3 ? ? ? 1_555 C DA 40 N1 B ? F DT -1 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 4 O4 ? ? ? 1_555 C DA 40 N6 B ? F DT -1 F DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DT 5 N3 ? ? ? 1_555 C DA 39 N1 ? ? F DT 0 F DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 5 O4 ? ? ? 1_555 C DA 39 N6 ? ? F DT 0 F DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 6 N3 ? ? ? 1_555 C DG 38 N1 ? ? F DC 1 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 6 N4 ? ? ? 1_555 C DG 38 O6 ? ? F DC 1 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 6 O2 ? ? ? 1_555 C DG 38 N2 ? ? F DC 1 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C OMC 7 N3 ? ? ? 1_555 C DG 37 N1 ? ? F OMC 2 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C OMC 7 N4 ? ? ? 1_555 C DG 37 O6 ? ? F OMC 2 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C OMC 7 O2 ? ? ? 1_555 C DG 37 N2 ? ? F OMC 2 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 8 N3 ? ? ? 1_555 C DG 36 N1 ? ? F DC 3 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 8 N4 ? ? ? 1_555 C DG 36 O6 ? ? F DC 3 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 8 O2 ? ? ? 1_555 C DG 36 N2 ? ? F DC 3 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C OMC 9 N3 ? ? ? 1_555 C DG 35 N1 ? ? F OMC 4 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C OMC 9 N4 ? ? ? 1_555 C DG 35 O6 ? ? F OMC 4 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C OMC 9 O2 ? ? ? 1_555 C DG 35 N2 ? ? F OMC 4 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 10 N3 ? ? ? 1_555 C DG 34 N1 ? ? F DC 5 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 10 N4 ? ? ? 1_555 C DG 34 O6 ? ? F DC 5 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 10 O2 ? ? ? 1_555 C DG 34 N2 ? ? F DC 5 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 11 N3 ? ? ? 1_555 C DG 33 N1 ? ? F DC 6 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 11 N4 ? ? ? 1_555 C DG 33 O6 ? ? F DC 6 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 11 O2 ? ? ? 1_555 C DG 33 N2 ? ? F DC 6 F DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 12 N3 ? ? ? 1_555 C DG 32 N1 ? ? F DC 7 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 12 N4 ? ? ? 1_555 C DG 32 O6 ? ? F DC 7 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 12 O2 ? ? ? 1_555 C DG 32 N2 ? ? F DC 7 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 13 N3 ? ? ? 1_555 C DA 31 N1 ? ? F DT 8 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 13 O4 ? ? ? 1_555 C DA 31 N6 ? ? F DT 8 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 14 N3 ? ? ? 1_555 C DA 30 N1 ? ? F DT 9 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 14 O4 ? ? ? 1_555 C DA 30 N6 ? ? F DT 9 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 15 N3 ? ? ? 1_555 C DG 29 N1 ? ? F DC 10 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 15 N4 ? ? ? 1_555 C DG 29 O6 ? ? F DC 10 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 15 O2 ? ? ? 1_555 C DG 29 N2 ? ? F DC 10 F DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 16 N1 ? ? ? 1_555 C DC 28 N3 ? ? F DG 11 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 16 N2 ? ? ? 1_555 C DC 28 O2 ? ? F DG 11 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 16 O6 ? ? ? 1_555 C DC 28 N4 ? ? F DG 11 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 17 N1 ? ? ? 1_555 C DC 27 N3 ? ? F DG 12 F DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 17 N2 ? ? ? 1_555 C DC 27 O2 ? ? F DG 12 F DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 17 O6 ? ? ? 1_555 C DC 27 N4 ? ? F DG 12 F DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DT 18 N3 ? ? ? 1_555 C DA 26 N1 ? ? F DT 13 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 18 O4 ? ? ? 1_555 C DA 26 N6 ? ? F DT 13 F DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 19 N1 ? ? ? 1_555 C DC 25 N3 ? ? F DG 14 F DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 19 N2 ? ? ? 1_555 C DC 25 O2 ? ? F DG 14 F DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 19 O6 ? ? ? 1_555 C DC 25 N4 ? ? F DG 14 F DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 20 N3 ? ? ? 1_555 C DG 24 N1 ? ? F DC 15 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 20 N4 ? ? ? 1_555 C DG 24 O6 ? ? F DC 15 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 20 O2 ? ? ? 1_555 C DG 24 N2 ? ? F DC 15 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O ? A VAL 113 ? A VAL 111 ? 1_555 106.3 ? 2 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 108.4 ? 3 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 72.5 ? 4 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O3G A D DTP . ? A DTP 601 ? 1_555 104.5 ? 5 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O3G A D DTP . ? A DTP 601 ? 1_555 87.8 ? 6 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O3G A D DTP . ? A DTP 601 ? 1_555 145.2 ? 7 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1B A D DTP . ? A DTP 601 ? 1_555 164.5 ? 8 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1B A D DTP . ? A DTP 601 ? 1_555 88.6 ? 9 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1B A D DTP . ? A DTP 601 ? 1_555 79.9 ? 10 O3G A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1B A D DTP . ? A DTP 601 ? 1_555 71.0 ? 11 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 101.4 ? 12 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 135.1 ? 13 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 65.5 ? 14 O3G A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 118.6 ? 15 O1B A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 69.6 ? 16 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 156.7 ? 17 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 94.0 ? 18 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 88.3 ? 19 O3G A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 64.1 ? 20 O1B A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 8.9 ? 21 O1A A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 O6 B E POP . ? A POP 602 ? 1_555 70.3 ? 22 OD2 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 83.7 ? 23 O ? A VAL 113 ? A VAL 111 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 165.2 ? 24 OD2 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 94.2 ? 25 O3G A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 100.4 ? 26 O1B A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 82.6 ? 27 O1A A D DTP . ? A DTP 601 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 30.2 ? 28 O6 B E POP . ? A POP 602 ? 1_555 MG ? F MG . ? A MG 603 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 78.9 ? 29 OD1 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 OD1 ? A ASP 187 ? A ASP 185 ? 1_555 107.4 ? 30 OD1 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 123.6 ? 31 OD1 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 O1A A D DTP . ? A DTP 601 ? 1_555 80.6 ? 32 OD1 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 "O3'" ? C DA 39 ? F DA 34 ? 1_555 156.9 ? 33 OD1 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 "O3'" ? C DA 39 ? F DA 34 ? 1_555 95.7 ? 34 O1A A D DTP . ? A DTP 601 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 "O3'" ? C DA 39 ? F DA 34 ? 1_555 58.9 ? 35 OD1 ? A ASP 112 ? A ASP 110 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 113.8 ? 36 OD1 ? A ASP 187 ? A ASP 185 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 113.0 ? 37 O1A A D DTP . ? A DTP 601 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 32.7 ? 38 "O3'" ? C DA 39 ? F DA 34 ? 1_555 MG ? G MG . ? A MG 604 ? 1_555 OP1 B C DA 40 ? F DA 35 ? 1_555 54.0 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 141 A . ? THR 139 A PRO 142 A ? PRO 140 A 1 14.98 2 PRO 227 A . ? PRO 225 A PRO 228 A ? PRO 226 A 1 -0.63 3 PRO 422 A . ? PRO 420 A PRO 423 A ? PRO 421 A 1 0.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 5 ? AA6 ? 2 ? AA7 ? 5 ? AA8 ? 3 ? AA9 ? 2 ? AB1 ? 3 ? AB2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? parallel AA7 4 5 ? parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? parallel AB2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 49 ? LYS A 51 ? ILE A 47 LYS A 49 AA1 2 ILE A 144 ? TYR A 148 ? ILE A 142 TYR A 146 AA1 3 PHE A 132 ? ILE A 134 ? PHE A 130 ILE A 132 AA2 1 VAL A 62 ? LYS A 66 ? VAL A 60 LYS A 64 AA2 2 TRP A 73 ? VAL A 77 ? TRP A 71 VAL A 75 AA3 1 SER A 107 ? ASP A 112 ? SER A 105 ASP A 110 AA3 2 ASP A 188 ? SER A 193 ? ASP A 186 SER A 191 AA3 3 VAL A 181 ? TYR A 185 ? VAL A 179 TYR A 183 AA4 1 PHE A 229 ? TRP A 231 ? PHE A 227 TRP A 229 AA4 2 TYR A 234 ? LEU A 236 ? TYR A 232 LEU A 234 AA4 3 TRP A 241 ? VAL A 243 ? TRP A 239 VAL A 241 AA5 1 LYS A 349 ? TYR A 356 ? LYS A 347 TYR A 354 AA5 2 GLN A 338 ? GLU A 346 ? GLN A 336 GLU A 344 AA5 3 ILE A 328 ? GLY A 335 ? ILE A 326 GLY A 333 AA5 4 LYS A 390 ? LEU A 393 ? LYS A 388 LEU A 391 AA5 5 TRP A 416 ? PHE A 418 ? TRP A 414 PHE A 416 AA6 1 HIS A 363 ? THR A 364 ? HIS A 361 THR A 362 AA6 2 LYS A 514 ? SER A 515 ? LYS A 512 SER A 513 AA7 1 ARG A 465 ? THR A 472 ? ARG A 463 THR A 470 AA7 2 LEU A 454 ? THR A 461 ? LEU A 452 THR A 459 AA7 3 GLU A 440 ? ALA A 448 ? GLU A 438 ALA A 446 AA7 4 GLU A 494 ? THR A 499 ? GLU A 492 THR A 497 AA7 5 LYS A 532 ? TRP A 537 ? LYS A 530 TRP A 535 AA8 1 ILE B 63 ? LYS B 65 ? ILE B 47 LYS B 49 AA8 2 ILE B 158 ? TYR B 162 ? ILE B 142 TYR B 146 AA8 3 ALA B 145 ? ILE B 148 ? ALA B 129 ILE B 132 AA9 1 VAL B 76 ? LYS B 80 ? VAL B 60 LYS B 64 AA9 2 TRP B 87 ? VAL B 91 ? TRP B 71 VAL B 75 AB1 1 THR B 123 ? ASP B 126 ? THR B 107 ASP B 110 AB1 2 ASP B 202 ? SER B 207 ? ASP B 186 SER B 191 AB1 3 ILE B 194 ? TYR B 199 ? ILE B 178 TYR B 183 AB2 1 ASN B 364 ? TYR B 370 ? ASN B 348 TYR B 354 AB2 2 TRP B 353 ? TYR B 358 ? TRP B 337 TYR B 342 AB2 3 ILE B 342 ? LYS B 347 ? ILE B 326 LYS B 331 AB2 4 LYS B 404 ? LEU B 407 ? LYS B 388 LEU B 391 AB2 5 GLU B 429 ? PHE B 432 ? GLU B 413 PHE B 416 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 50 ? N SER A 48 O GLN A 147 ? O GLN A 145 AA1 2 3 O TYR A 146 ? O TYR A 144 N PHE A 132 ? N PHE A 130 AA2 1 2 N PHE A 63 ? N PHE A 61 O LEU A 76 ? O LEU A 74 AA3 1 2 N THR A 109 ? N THR A 107 O VAL A 191 ? O VAL A 189 AA3 2 3 O TYR A 190 ? O TYR A 188 N TYR A 183 ? N TYR A 181 AA4 1 2 N TRP A 231 ? N TRP A 229 O TYR A 234 ? O TYR A 232 AA4 2 3 N GLU A 235 ? N GLU A 233 O THR A 242 ? O THR A 240 AA5 1 2 O LYS A 352 ? O LYS A 350 N ILE A 343 ? N ILE A 341 AA5 2 3 O TYR A 344 ? O TYR A 342 N ILE A 328 ? N ILE A 326 AA5 3 4 N ALA A 329 ? N ALA A 327 O LYS A 390 ? O LYS A 388 AA5 4 5 N PHE A 391 ? N PHE A 389 O GLU A 417 ? O GLU A 415 AA6 1 2 N THR A 364 ? N THR A 362 O LYS A 514 ? O LYS A 512 AA7 1 2 O LEU A 471 ? O LEU A 469 N GLY A 455 ? N GLY A 453 AA7 2 3 O VAL A 460 ? O VAL A 458 N TYR A 443 ? N TYR A 441 AA7 3 4 N PHE A 442 ? N PHE A 440 O VAL A 498 ? O VAL A 496 AA7 4 5 N THR A 499 ? N THR A 497 O ALA A 536 ? O ALA A 534 AA8 1 2 N SER B 64 ? N SER B 48 O GLN B 161 ? O GLN B 145 AA8 2 3 O ILE B 158 ? O ILE B 142 N ILE B 148 ? N ILE B 132 AA9 1 2 N PHE B 77 ? N PHE B 61 O LEU B 90 ? O LEU B 74 AB1 1 2 N THR B 123 ? N THR B 107 O VAL B 205 ? O VAL B 189 AB1 2 3 O ASP B 202 ? O ASP B 186 N TYR B 199 ? N TYR B 183 AB2 1 2 O LYS B 366 ? O LYS B 350 N ILE B 357 ? N ILE B 341 AB2 2 3 O TYR B 358 ? O TYR B 342 N ILE B 342 ? N ILE B 326 AB2 3 4 N ALA B 343 ? N ALA B 327 O LYS B 404 ? O LYS B 388 AB2 4 5 N PHE B 405 ? N PHE B 389 O GLU B 429 ? O GLU B 413 # _pdbx_entry_details.entry_id 8VBF _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 "O3'" _pdbx_validate_close_contact.auth_asym_id_1 F _pdbx_validate_close_contact.auth_comp_id_1 DA _pdbx_validate_close_contact.auth_seq_id_1 34 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O2A _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 DTP _pdbx_validate_close_contact.auth_seq_id_2 601 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 A _pdbx_validate_close_contact.dist 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 136 ? ? -74.49 -128.35 2 1 GLU A 138 ? ? -25.58 -56.95 3 1 MET A 184 ? ? 63.04 -117.95 4 1 LYS A 287 ? ? -91.46 58.75 5 1 ALA A 288 ? ? 57.48 -145.20 6 1 PRO A 412 ? ? -68.72 -175.76 7 1 ASN A 471 ? ? 56.25 70.31 8 1 PHE B 61 ? ? -161.73 -169.70 9 1 SER B 68 ? ? -138.80 -31.46 10 1 THR B 69 ? ? 55.40 3.12 11 1 THR B 128 ? ? -93.12 55.22 12 1 PRO B 176 ? ? -65.00 0.08 13 1 MET B 184 ? ? 54.56 -102.56 14 1 VAL B 276 ? ? 47.81 -0.73 15 1 THR B 286 ? ? -104.24 40.27 16 1 LEU B 295 ? ? 49.46 -102.58 17 1 VAL B 314 ? ? 20.91 94.28 18 1 VAL B 317 ? ? 33.46 51.46 19 1 PRO B 321 ? ? -78.30 42.86 20 1 PHE B 346 ? ? 72.12 -5.79 21 1 ARG B 356 ? ? 54.46 -76.33 22 1 ARG B 358 ? ? -66.38 -177.27 23 1 ASN B 418 ? ? -167.36 54.58 24 1 PRO B 421 ? ? -37.39 122.97 25 1 VAL B 423 ? ? 72.38 75.80 26 1 LYS B 424 ? ? 57.78 -108.21 27 1 LEU B 425 ? ? 77.99 -50.28 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8VBF _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8VBF _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 337798 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Reverse transcriptase/ribonuclease H in complex with DNA aptamer' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 8VBF _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 750 _em_imaging.nominal_defocus_max 2250 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 96000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.details ? # _em_vitrification.entry_id 8VBF _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 289 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8VBF _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8VBF _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A VAL 0 ? A VAL 2 3 1 Y 1 A LYS 550 ? A LYS 552 4 1 Y 1 A LEU 551 ? A LEU 553 5 1 Y 1 A VAL 552 ? A VAL 554 6 1 Y 1 A SER 553 ? A SER 555 7 1 Y 1 A ALA 554 ? A ALA 556 8 1 Y 1 A GLY 555 ? A GLY 557 9 1 Y 1 B MET -15 ? B MET 1 10 1 Y 1 B ALA -14 ? B ALA 2 11 1 Y 1 B HIS -13 ? B HIS 3 12 1 Y 1 B HIS -12 ? B HIS 4 13 1 Y 1 B HIS -11 ? B HIS 5 14 1 Y 1 B HIS -10 ? B HIS 6 15 1 Y 1 B HIS -9 ? B HIS 7 16 1 Y 1 B HIS -8 ? B HIS 8 17 1 Y 1 B ALA -7 ? B ALA 9 18 1 Y 1 B LEU -6 ? B LEU 10 19 1 Y 1 B GLU -5 ? B GLU 11 20 1 Y 1 B VAL -4 ? B VAL 12 21 1 Y 1 B LEU -3 ? B LEU 13 22 1 Y 1 B PHE -2 ? B PHE 14 23 1 Y 1 B GLN -1 ? B GLN 15 24 1 Y 1 B GLY 0 ? B GLY 16 25 1 Y 1 B PRO 1 ? B PRO 17 26 1 Y 1 B ILE 2 ? B ILE 18 27 1 Y 1 B SER 3 ? B SER 19 28 1 Y 1 B PRO 4 ? B PRO 20 29 1 Y 1 B ILE 5 ? B ILE 21 30 1 Y 1 B GLU 6 ? B GLU 22 31 1 Y 1 B PHE 87 ? B PHE 103 32 1 Y 1 B TRP 88 ? B TRP 104 33 1 Y 1 B GLU 89 ? B GLU 105 34 1 Y 1 B VAL 90 ? B VAL 106 35 1 Y 1 B GLN 91 ? B GLN 107 36 1 Y 1 B LEU 92 ? B LEU 108 37 1 Y 1 B GLY 93 ? B GLY 109 38 1 Y 1 B ILE 94 ? B ILE 110 39 1 Y 1 B ARG 211 ? B ARG 227 40 1 Y 1 B TRP 212 ? B TRP 228 41 1 Y 1 B GLY 213 ? B GLY 229 42 1 Y 1 B LEU 214 ? B LEU 230 43 1 Y 1 B THR 215 ? B THR 231 44 1 Y 1 B THR 216 ? B THR 232 45 1 Y 1 B PRO 217 ? B PRO 233 46 1 Y 1 B ASP 218 ? B ASP 234 47 1 Y 1 B LYS 219 ? B LYS 235 48 1 Y 1 B LYS 220 ? B LYS 236 49 1 Y 1 B HIS 221 ? B HIS 237 50 1 Y 1 B GLN 222 ? B GLN 238 51 1 Y 1 B LYS 223 ? B LYS 239 52 1 Y 1 B GLU 224 ? B GLU 240 53 1 Y 1 B PRO 225 ? B PRO 241 54 1 Y 1 B PRO 226 ? B PRO 242 55 1 Y 1 B PHE 227 ? B PHE 243 56 1 Y 1 B LEU 228 ? B LEU 244 57 1 Y 1 B TRP 229 ? B TRP 245 58 1 Y 1 B MET 230 ? B MET 246 59 1 Y 1 B GLY 231 ? B GLY 247 60 1 Y 1 B TYR 232 ? B TYR 248 61 1 Y 1 B GLU 233 ? B GLU 249 62 1 Y 1 B GLN 428 ? B GLN 444 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 DTP PG P N N 231 DTP O1G O N N 232 DTP O2G O N N 233 DTP O3G O N N 234 DTP PB P N S 235 DTP O1B O N N 236 DTP O2B O N N 237 DTP O3B O N N 238 DTP PA P N S 239 DTP O1A O N N 240 DTP O2A O N N 241 DTP O3A O N N 242 DTP "O5'" O N N 243 DTP "C5'" C N N 244 DTP "C4'" C N R 245 DTP "O4'" O N N 246 DTP "C3'" C N S 247 DTP "O3'" O N N 248 DTP "C2'" C N N 249 DTP "C1'" C N R 250 DTP N9 N Y N 251 DTP C8 C Y N 252 DTP N7 N Y N 253 DTP C5 C Y N 254 DTP C6 C Y N 255 DTP N6 N N N 256 DTP N1 N Y N 257 DTP C2 C Y N 258 DTP N3 N Y N 259 DTP C4 C Y N 260 DTP HOG2 H N N 261 DTP HOG3 H N N 262 DTP HOB2 H N N 263 DTP HOA2 H N N 264 DTP "H5'1" H N N 265 DTP "H5'2" H N N 266 DTP "H4'" H N N 267 DTP "H3'" H N N 268 DTP "HO3'" H N N 269 DTP "H2'1" H N N 270 DTP "H2'2" H N N 271 DTP "H1'" H N N 272 DTP H8 H N N 273 DTP HN61 H N N 274 DTP HN62 H N N 275 DTP H2 H N N 276 GLN N N N N 277 GLN CA C N S 278 GLN C C N N 279 GLN O O N N 280 GLN CB C N N 281 GLN CG C N N 282 GLN CD C N N 283 GLN OE1 O N N 284 GLN NE2 N N N 285 GLN OXT O N N 286 GLN H H N N 287 GLN H2 H N N 288 GLN HA H N N 289 GLN HB2 H N N 290 GLN HB3 H N N 291 GLN HG2 H N N 292 GLN HG3 H N N 293 GLN HE21 H N N 294 GLN HE22 H N N 295 GLN HXT H N N 296 GLU N N N N 297 GLU CA C N S 298 GLU C C N N 299 GLU O O N N 300 GLU CB C N N 301 GLU CG C N N 302 GLU CD C N N 303 GLU OE1 O N N 304 GLU OE2 O N N 305 GLU OXT O N N 306 GLU H H N N 307 GLU H2 H N N 308 GLU HA H N N 309 GLU HB2 H N N 310 GLU HB3 H N N 311 GLU HG2 H N N 312 GLU HG3 H N N 313 GLU HE2 H N N 314 GLU HXT H N N 315 GLY N N N N 316 GLY CA C N N 317 GLY C C N N 318 GLY O O N N 319 GLY OXT O N N 320 GLY H H N N 321 GLY H2 H N N 322 GLY HA2 H N N 323 GLY HA3 H N N 324 GLY HXT H N N 325 HIS N N N N 326 HIS CA C N S 327 HIS C C N N 328 HIS O O N N 329 HIS CB C N N 330 HIS CG C Y N 331 HIS ND1 N Y N 332 HIS CD2 C Y N 333 HIS CE1 C Y N 334 HIS NE2 N Y N 335 HIS OXT O N N 336 HIS H H N N 337 HIS H2 H N N 338 HIS HA H N N 339 HIS HB2 H N N 340 HIS HB3 H N N 341 HIS HD1 H N N 342 HIS HD2 H N N 343 HIS HE1 H N N 344 HIS HE2 H N N 345 HIS HXT H N N 346 ILE N N N N 347 ILE CA C N S 348 ILE C C N N 349 ILE O O N N 350 ILE CB C N S 351 ILE CG1 C N N 352 ILE CG2 C N N 353 ILE CD1 C N N 354 ILE OXT O N N 355 ILE H H N N 356 ILE H2 H N N 357 ILE HA H N N 358 ILE HB H N N 359 ILE HG12 H N N 360 ILE HG13 H N N 361 ILE HG21 H N N 362 ILE HG22 H N N 363 ILE HG23 H N N 364 ILE HD11 H N N 365 ILE HD12 H N N 366 ILE HD13 H N N 367 ILE HXT H N N 368 LEU N N N N 369 LEU CA C N S 370 LEU C C N N 371 LEU O O N N 372 LEU CB C N N 373 LEU CG C N N 374 LEU CD1 C N N 375 LEU CD2 C N N 376 LEU OXT O N N 377 LEU H H N N 378 LEU H2 H N N 379 LEU HA H N N 380 LEU HB2 H N N 381 LEU HB3 H N N 382 LEU HG H N N 383 LEU HD11 H N N 384 LEU HD12 H N N 385 LEU HD13 H N N 386 LEU HD21 H N N 387 LEU HD22 H N N 388 LEU HD23 H N N 389 LEU HXT H N N 390 LYS N N N N 391 LYS CA C N S 392 LYS C C N N 393 LYS O O N N 394 LYS CB C N N 395 LYS CG C N N 396 LYS CD C N N 397 LYS CE C N N 398 LYS NZ N N N 399 LYS OXT O N N 400 LYS H H N N 401 LYS H2 H N N 402 LYS HA H N N 403 LYS HB2 H N N 404 LYS HB3 H N N 405 LYS HG2 H N N 406 LYS HG3 H N N 407 LYS HD2 H N N 408 LYS HD3 H N N 409 LYS HE2 H N N 410 LYS HE3 H N N 411 LYS HZ1 H N N 412 LYS HZ2 H N N 413 LYS HZ3 H N N 414 LYS HXT H N N 415 MET N N N N 416 MET CA C N S 417 MET C C N N 418 MET O O N N 419 MET CB C N N 420 MET CG C N N 421 MET SD S N N 422 MET CE C N N 423 MET OXT O N N 424 MET H H N N 425 MET H2 H N N 426 MET HA H N N 427 MET HB2 H N N 428 MET HB3 H N N 429 MET HG2 H N N 430 MET HG3 H N N 431 MET HE1 H N N 432 MET HE2 H N N 433 MET HE3 H N N 434 MET HXT H N N 435 MG MG MG N N 436 OMC N1 N N N 437 OMC C2 C N N 438 OMC N3 N N N 439 OMC C4 C N N 440 OMC C5 C N N 441 OMC C6 C N N 442 OMC O2 O N N 443 OMC N4 N N N 444 OMC "C1'" C N R 445 OMC "C2'" C N R 446 OMC "O2'" O N N 447 OMC CM2 C N N 448 OMC "C3'" C N R 449 OMC "C4'" C N R 450 OMC "O4'" O N N 451 OMC "O3'" O N N 452 OMC "C5'" C N N 453 OMC "O5'" O N N 454 OMC P P N N 455 OMC OP1 O N N 456 OMC OP2 O N N 457 OMC OP3 O N N 458 OMC H5 H N N 459 OMC H6 H N N 460 OMC HN41 H N N 461 OMC HN42 H N N 462 OMC "H1'" H N N 463 OMC "H2'" H N N 464 OMC HM21 H N N 465 OMC HM22 H N N 466 OMC HM23 H N N 467 OMC "H3'" H N N 468 OMC "H4'" H N N 469 OMC "HO3'" H N N 470 OMC "H5'" H N N 471 OMC "H5''" H N N 472 OMC HOP2 H N N 473 OMC HOP3 H N N 474 PHE N N N N 475 PHE CA C N S 476 PHE C C N N 477 PHE O O N N 478 PHE CB C N N 479 PHE CG C Y N 480 PHE CD1 C Y N 481 PHE CD2 C Y N 482 PHE CE1 C Y N 483 PHE CE2 C Y N 484 PHE CZ C Y N 485 PHE OXT O N N 486 PHE H H N N 487 PHE H2 H N N 488 PHE HA H N N 489 PHE HB2 H N N 490 PHE HB3 H N N 491 PHE HD1 H N N 492 PHE HD2 H N N 493 PHE HE1 H N N 494 PHE HE2 H N N 495 PHE HZ H N N 496 PHE HXT H N N 497 POP P1 P N N 498 POP O1 O N N 499 POP O2 O N N 500 POP O3 O N N 501 POP O O N N 502 POP P2 P N N 503 POP O4 O N N 504 POP O5 O N N 505 POP O6 O N N 506 POP HO2 H N N 507 POP HO5 H N N 508 PRO N N N N 509 PRO CA C N S 510 PRO C C N N 511 PRO O O N N 512 PRO CB C N N 513 PRO CG C N N 514 PRO CD C N N 515 PRO OXT O N N 516 PRO H H N N 517 PRO HA H N N 518 PRO HB2 H N N 519 PRO HB3 H N N 520 PRO HG2 H N N 521 PRO HG3 H N N 522 PRO HD2 H N N 523 PRO HD3 H N N 524 PRO HXT H N N 525 SER N N N N 526 SER CA C N S 527 SER C C N N 528 SER O O N N 529 SER CB C N N 530 SER OG O N N 531 SER OXT O N N 532 SER H H N N 533 SER H2 H N N 534 SER HA H N N 535 SER HB2 H N N 536 SER HB3 H N N 537 SER HG H N N 538 SER HXT H N N 539 THR N N N N 540 THR CA C N S 541 THR C C N N 542 THR O O N N 543 THR CB C N R 544 THR OG1 O N N 545 THR CG2 C N N 546 THR OXT O N N 547 THR H H N N 548 THR H2 H N N 549 THR HA H N N 550 THR HB H N N 551 THR HG1 H N N 552 THR HG21 H N N 553 THR HG22 H N N 554 THR HG23 H N N 555 THR HXT H N N 556 TRP N N N N 557 TRP CA C N S 558 TRP C C N N 559 TRP O O N N 560 TRP CB C N N 561 TRP CG C Y N 562 TRP CD1 C Y N 563 TRP CD2 C Y N 564 TRP NE1 N Y N 565 TRP CE2 C Y N 566 TRP CE3 C Y N 567 TRP CZ2 C Y N 568 TRP CZ3 C Y N 569 TRP CH2 C Y N 570 TRP OXT O N N 571 TRP H H N N 572 TRP H2 H N N 573 TRP HA H N N 574 TRP HB2 H N N 575 TRP HB3 H N N 576 TRP HD1 H N N 577 TRP HE1 H N N 578 TRP HE3 H N N 579 TRP HZ2 H N N 580 TRP HZ3 H N N 581 TRP HH2 H N N 582 TRP HXT H N N 583 TYR N N N N 584 TYR CA C N S 585 TYR C C N N 586 TYR O O N N 587 TYR CB C N N 588 TYR CG C Y N 589 TYR CD1 C Y N 590 TYR CD2 C Y N 591 TYR CE1 C Y N 592 TYR CE2 C Y N 593 TYR CZ C Y N 594 TYR OH O N N 595 TYR OXT O N N 596 TYR H H N N 597 TYR H2 H N N 598 TYR HA H N N 599 TYR HB2 H N N 600 TYR HB3 H N N 601 TYR HD1 H N N 602 TYR HD2 H N N 603 TYR HE1 H N N 604 TYR HE2 H N N 605 TYR HH H N N 606 TYR HXT H N N 607 VAL N N N N 608 VAL CA C N S 609 VAL C C N N 610 VAL O O N N 611 VAL CB C N N 612 VAL CG1 C N N 613 VAL CG2 C N N 614 VAL OXT O N N 615 VAL H H N N 616 VAL H2 H N N 617 VAL HA H N N 618 VAL HB H N N 619 VAL HG11 H N N 620 VAL HG12 H N N 621 VAL HG13 H N N 622 VAL HG21 H N N 623 VAL HG22 H N N 624 VAL HG23 H N N 625 VAL HXT H N N 626 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 DTP PG O1G doub N N 232 DTP PG O2G sing N N 233 DTP PG O3G sing N N 234 DTP PG O3B sing N N 235 DTP O2G HOG2 sing N N 236 DTP O3G HOG3 sing N N 237 DTP PB O1B doub N N 238 DTP PB O2B sing N N 239 DTP PB O3B sing N N 240 DTP PB O3A sing N N 241 DTP O2B HOB2 sing N N 242 DTP PA O1A doub N N 243 DTP PA O2A sing N N 244 DTP PA O3A sing N N 245 DTP PA "O5'" sing N N 246 DTP O2A HOA2 sing N N 247 DTP "O5'" "C5'" sing N N 248 DTP "C5'" "C4'" sing N N 249 DTP "C5'" "H5'1" sing N N 250 DTP "C5'" "H5'2" sing N N 251 DTP "C4'" "O4'" sing N N 252 DTP "C4'" "C3'" sing N N 253 DTP "C4'" "H4'" sing N N 254 DTP "O4'" "C1'" sing N N 255 DTP "C3'" "O3'" sing N N 256 DTP "C3'" "C2'" sing N N 257 DTP "C3'" "H3'" sing N N 258 DTP "O3'" "HO3'" sing N N 259 DTP "C2'" "C1'" sing N N 260 DTP "C2'" "H2'1" sing N N 261 DTP "C2'" "H2'2" sing N N 262 DTP "C1'" N9 sing N N 263 DTP "C1'" "H1'" sing N N 264 DTP N9 C8 sing Y N 265 DTP N9 C4 sing Y N 266 DTP C8 N7 doub Y N 267 DTP C8 H8 sing N N 268 DTP N7 C5 sing Y N 269 DTP C5 C6 sing Y N 270 DTP C5 C4 doub Y N 271 DTP C6 N6 sing N N 272 DTP C6 N1 doub Y N 273 DTP N6 HN61 sing N N 274 DTP N6 HN62 sing N N 275 DTP N1 C2 sing Y N 276 DTP C2 N3 doub Y N 277 DTP C2 H2 sing N N 278 DTP N3 C4 sing Y N 279 GLN N CA sing N N 280 GLN N H sing N N 281 GLN N H2 sing N N 282 GLN CA C sing N N 283 GLN CA CB sing N N 284 GLN CA HA sing N N 285 GLN C O doub N N 286 GLN C OXT sing N N 287 GLN CB CG sing N N 288 GLN CB HB2 sing N N 289 GLN CB HB3 sing N N 290 GLN CG CD sing N N 291 GLN CG HG2 sing N N 292 GLN CG HG3 sing N N 293 GLN CD OE1 doub N N 294 GLN CD NE2 sing N N 295 GLN NE2 HE21 sing N N 296 GLN NE2 HE22 sing N N 297 GLN OXT HXT sing N N 298 GLU N CA sing N N 299 GLU N H sing N N 300 GLU N H2 sing N N 301 GLU CA C sing N N 302 GLU CA CB sing N N 303 GLU CA HA sing N N 304 GLU C O doub N N 305 GLU C OXT sing N N 306 GLU CB CG sing N N 307 GLU CB HB2 sing N N 308 GLU CB HB3 sing N N 309 GLU CG CD sing N N 310 GLU CG HG2 sing N N 311 GLU CG HG3 sing N N 312 GLU CD OE1 doub N N 313 GLU CD OE2 sing N N 314 GLU OE2 HE2 sing N N 315 GLU OXT HXT sing N N 316 GLY N CA sing N N 317 GLY N H sing N N 318 GLY N H2 sing N N 319 GLY CA C sing N N 320 GLY CA HA2 sing N N 321 GLY CA HA3 sing N N 322 GLY C O doub N N 323 GLY C OXT sing N N 324 GLY OXT HXT sing N N 325 HIS N CA sing N N 326 HIS N H sing N N 327 HIS N H2 sing N N 328 HIS CA C sing N N 329 HIS CA CB sing N N 330 HIS CA HA sing N N 331 HIS C O doub N N 332 HIS C OXT sing N N 333 HIS CB CG sing N N 334 HIS CB HB2 sing N N 335 HIS CB HB3 sing N N 336 HIS CG ND1 sing Y N 337 HIS CG CD2 doub Y N 338 HIS ND1 CE1 doub Y N 339 HIS ND1 HD1 sing N N 340 HIS CD2 NE2 sing Y N 341 HIS CD2 HD2 sing N N 342 HIS CE1 NE2 sing Y N 343 HIS CE1 HE1 sing N N 344 HIS NE2 HE2 sing N N 345 HIS OXT HXT sing N N 346 ILE N CA sing N N 347 ILE N H sing N N 348 ILE N H2 sing N N 349 ILE CA C sing N N 350 ILE CA CB sing N N 351 ILE CA HA sing N N 352 ILE C O doub N N 353 ILE C OXT sing N N 354 ILE CB CG1 sing N N 355 ILE CB CG2 sing N N 356 ILE CB HB sing N N 357 ILE CG1 CD1 sing N N 358 ILE CG1 HG12 sing N N 359 ILE CG1 HG13 sing N N 360 ILE CG2 HG21 sing N N 361 ILE CG2 HG22 sing N N 362 ILE CG2 HG23 sing N N 363 ILE CD1 HD11 sing N N 364 ILE CD1 HD12 sing N N 365 ILE CD1 HD13 sing N N 366 ILE OXT HXT sing N N 367 LEU N CA sing N N 368 LEU N H sing N N 369 LEU N H2 sing N N 370 LEU CA C sing N N 371 LEU CA CB sing N N 372 LEU CA HA sing N N 373 LEU C O doub N N 374 LEU C OXT sing N N 375 LEU CB CG sing N N 376 LEU CB HB2 sing N N 377 LEU CB HB3 sing N N 378 LEU CG CD1 sing N N 379 LEU CG CD2 sing N N 380 LEU CG HG sing N N 381 LEU CD1 HD11 sing N N 382 LEU CD1 HD12 sing N N 383 LEU CD1 HD13 sing N N 384 LEU CD2 HD21 sing N N 385 LEU CD2 HD22 sing N N 386 LEU CD2 HD23 sing N N 387 LEU OXT HXT sing N N 388 LYS N CA sing N N 389 LYS N H sing N N 390 LYS N H2 sing N N 391 LYS CA C sing N N 392 LYS CA CB sing N N 393 LYS CA HA sing N N 394 LYS C O doub N N 395 LYS C OXT sing N N 396 LYS CB CG sing N N 397 LYS CB HB2 sing N N 398 LYS CB HB3 sing N N 399 LYS CG CD sing N N 400 LYS CG HG2 sing N N 401 LYS CG HG3 sing N N 402 LYS CD CE sing N N 403 LYS CD HD2 sing N N 404 LYS CD HD3 sing N N 405 LYS CE NZ sing N N 406 LYS CE HE2 sing N N 407 LYS CE HE3 sing N N 408 LYS NZ HZ1 sing N N 409 LYS NZ HZ2 sing N N 410 LYS NZ HZ3 sing N N 411 LYS OXT HXT sing N N 412 MET N CA sing N N 413 MET N H sing N N 414 MET N H2 sing N N 415 MET CA C sing N N 416 MET CA CB sing N N 417 MET CA HA sing N N 418 MET C O doub N N 419 MET C OXT sing N N 420 MET CB CG sing N N 421 MET CB HB2 sing N N 422 MET CB HB3 sing N N 423 MET CG SD sing N N 424 MET CG HG2 sing N N 425 MET CG HG3 sing N N 426 MET SD CE sing N N 427 MET CE HE1 sing N N 428 MET CE HE2 sing N N 429 MET CE HE3 sing N N 430 MET OXT HXT sing N N 431 OMC N1 C2 sing N N 432 OMC N1 C6 sing N N 433 OMC N1 "C1'" sing N N 434 OMC C2 N3 sing N N 435 OMC C2 O2 doub N N 436 OMC N3 C4 doub N N 437 OMC C4 C5 sing N N 438 OMC C4 N4 sing N N 439 OMC C5 C6 doub N N 440 OMC C5 H5 sing N N 441 OMC C6 H6 sing N N 442 OMC N4 HN41 sing N N 443 OMC N4 HN42 sing N N 444 OMC "C1'" "C2'" sing N N 445 OMC "C1'" "O4'" sing N N 446 OMC "C1'" "H1'" sing N N 447 OMC "C2'" "O2'" sing N N 448 OMC "C2'" "C3'" sing N N 449 OMC "C2'" "H2'" sing N N 450 OMC "O2'" CM2 sing N N 451 OMC CM2 HM21 sing N N 452 OMC CM2 HM22 sing N N 453 OMC CM2 HM23 sing N N 454 OMC "C3'" "C4'" sing N N 455 OMC "C3'" "O3'" sing N N 456 OMC "C3'" "H3'" sing N N 457 OMC "C4'" "O4'" sing N N 458 OMC "C4'" "C5'" sing N N 459 OMC "C4'" "H4'" sing N N 460 OMC "O3'" "HO3'" sing N N 461 OMC "C5'" "O5'" sing N N 462 OMC "C5'" "H5'" sing N N 463 OMC "C5'" "H5''" sing N N 464 OMC "O5'" P sing N N 465 OMC P OP1 doub N N 466 OMC P OP2 sing N N 467 OMC P OP3 sing N N 468 OMC OP2 HOP2 sing N N 469 OMC OP3 HOP3 sing N N 470 PHE N CA sing N N 471 PHE N H sing N N 472 PHE N H2 sing N N 473 PHE CA C sing N N 474 PHE CA CB sing N N 475 PHE CA HA sing N N 476 PHE C O doub N N 477 PHE C OXT sing N N 478 PHE CB CG sing N N 479 PHE CB HB2 sing N N 480 PHE CB HB3 sing N N 481 PHE CG CD1 doub Y N 482 PHE CG CD2 sing Y N 483 PHE CD1 CE1 sing Y N 484 PHE CD1 HD1 sing N N 485 PHE CD2 CE2 doub Y N 486 PHE CD2 HD2 sing N N 487 PHE CE1 CZ doub Y N 488 PHE CE1 HE1 sing N N 489 PHE CE2 CZ sing Y N 490 PHE CE2 HE2 sing N N 491 PHE CZ HZ sing N N 492 PHE OXT HXT sing N N 493 POP P1 O1 doub N N 494 POP P1 O2 sing N N 495 POP P1 O3 sing N N 496 POP P1 O sing N N 497 POP O2 HO2 sing N N 498 POP O P2 sing N N 499 POP P2 O4 doub N N 500 POP P2 O5 sing N N 501 POP P2 O6 sing N N 502 POP O5 HO5 sing N N 503 PRO N CA sing N N 504 PRO N CD sing N N 505 PRO N H sing N N 506 PRO CA C sing N N 507 PRO CA CB sing N N 508 PRO CA HA sing N N 509 PRO C O doub N N 510 PRO C OXT sing N N 511 PRO CB CG sing N N 512 PRO CB HB2 sing N N 513 PRO CB HB3 sing N N 514 PRO CG CD sing N N 515 PRO CG HG2 sing N N 516 PRO CG HG3 sing N N 517 PRO CD HD2 sing N N 518 PRO CD HD3 sing N N 519 PRO OXT HXT sing N N 520 SER N CA sing N N 521 SER N H sing N N 522 SER N H2 sing N N 523 SER CA C sing N N 524 SER CA CB sing N N 525 SER CA HA sing N N 526 SER C O doub N N 527 SER C OXT sing N N 528 SER CB OG sing N N 529 SER CB HB2 sing N N 530 SER CB HB3 sing N N 531 SER OG HG sing N N 532 SER OXT HXT sing N N 533 THR N CA sing N N 534 THR N H sing N N 535 THR N H2 sing N N 536 THR CA C sing N N 537 THR CA CB sing N N 538 THR CA HA sing N N 539 THR C O doub N N 540 THR C OXT sing N N 541 THR CB OG1 sing N N 542 THR CB CG2 sing N N 543 THR CB HB sing N N 544 THR OG1 HG1 sing N N 545 THR CG2 HG21 sing N N 546 THR CG2 HG22 sing N N 547 THR CG2 HG23 sing N N 548 THR OXT HXT sing N N 549 TRP N CA sing N N 550 TRP N H sing N N 551 TRP N H2 sing N N 552 TRP CA C sing N N 553 TRP CA CB sing N N 554 TRP CA HA sing N N 555 TRP C O doub N N 556 TRP C OXT sing N N 557 TRP CB CG sing N N 558 TRP CB HB2 sing N N 559 TRP CB HB3 sing N N 560 TRP CG CD1 doub Y N 561 TRP CG CD2 sing Y N 562 TRP CD1 NE1 sing Y N 563 TRP CD1 HD1 sing N N 564 TRP CD2 CE2 doub Y N 565 TRP CD2 CE3 sing Y N 566 TRP NE1 CE2 sing Y N 567 TRP NE1 HE1 sing N N 568 TRP CE2 CZ2 sing Y N 569 TRP CE3 CZ3 doub Y N 570 TRP CE3 HE3 sing N N 571 TRP CZ2 CH2 doub Y N 572 TRP CZ2 HZ2 sing N N 573 TRP CZ3 CH2 sing Y N 574 TRP CZ3 HZ3 sing N N 575 TRP CH2 HH2 sing N N 576 TRP OXT HXT sing N N 577 TYR N CA sing N N 578 TYR N H sing N N 579 TYR N H2 sing N N 580 TYR CA C sing N N 581 TYR CA CB sing N N 582 TYR CA HA sing N N 583 TYR C O doub N N 584 TYR C OXT sing N N 585 TYR CB CG sing N N 586 TYR CB HB2 sing N N 587 TYR CB HB3 sing N N 588 TYR CG CD1 doub Y N 589 TYR CG CD2 sing Y N 590 TYR CD1 CE1 sing Y N 591 TYR CD1 HD1 sing N N 592 TYR CD2 CE2 doub Y N 593 TYR CD2 HD2 sing N N 594 TYR CE1 CZ doub Y N 595 TYR CE1 HE1 sing N N 596 TYR CE2 CZ sing Y N 597 TYR CE2 HE2 sing N N 598 TYR CZ OH sing N N 599 TYR OH HH sing N N 600 TYR OXT HXT sing N N 601 VAL N CA sing N N 602 VAL N H sing N N 603 VAL N H2 sing N N 604 VAL CA C sing N N 605 VAL CA CB sing N N 606 VAL CA HA sing N N 607 VAL C O doub N N 608 VAL C OXT sing N N 609 VAL CB CG1 sing N N 610 VAL CB CG2 sing N N 611 VAL CB HB sing N N 612 VAL CG1 HG11 sing N N 613 VAL CG1 HG12 sing N N 614 VAL CG1 HG13 sing N N 615 VAL CG2 HG21 sing N N 616 VAL CG2 HG22 sing N N 617 VAL CG2 HG23 sing N N 618 VAL OXT HXT sing N N 619 # _em_admin.current_status REL _em_admin.deposition_date 2023-12-12 _em_admin.deposition_site RCSB _em_admin.entry_id 8VBF _em_admin.last_update 2024-12-18 _em_admin.map_release_date 2024-12-11 _em_admin.title 'Kinetic intermediate states of HIV-1 RT DNA synthesis captured by cryo-EM' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 11676 _em_entity_assembly_naturalsource.organism 'Human immunodeficiency virus 1' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 866768 _em_entity_assembly_recombinant.organism ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 57 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.20.1_4487: 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 3.2 # _em_specimen.concentration 0.2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8VBF 'double helix' 8VBF 'a-form double helix' 8VBF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 4 1_555 C DA 40 1_555 0.270 0.018 -0.319 4.334 -5.767 8.087 1 F_DT-1:DA35_F F -1 ? F 35 ? 20 1 1 C DT 5 1_555 C DA 39 1_555 -0.657 0.065 -0.272 10.006 -11.468 3.448 2 F_DT0:DA34_F F 0 ? F 34 ? 20 1 1 C DC 6 1_555 C DG 38 1_555 0.106 -0.121 -0.315 9.345 -1.309 1.173 3 F_DC1:DG33_F F 1 ? F 33 ? 19 1 1 C OMC 7 1_555 C DG 37 1_555 0.075 -0.006 -0.457 16.109 -12.345 0.319 4 F_OMC2:DG32_F F 2 ? F 32 ? 19 1 1 C DC 8 1_555 C DG 36 1_555 0.304 -0.228 -0.200 5.643 -8.062 -0.907 5 F_DC3:DG31_F F 3 ? F 31 ? 19 1 1 C OMC 9 1_555 C DG 35 1_555 0.324 0.053 -0.293 10.930 -4.057 7.027 6 F_OMC4:DG30_F F 4 ? F 30 ? 19 1 1 C DC 10 1_555 C DG 34 1_555 0.215 -0.159 0.353 0.791 5.472 0.165 7 F_DC5:DG29_F F 5 ? F 29 ? 19 1 1 C DC 11 1_555 C DG 33 1_555 0.196 -0.184 0.497 5.770 2.983 0.487 8 F_DC6:DG28_F F 6 ? F 28 ? 19 1 1 C DC 12 1_555 C DG 32 1_555 0.172 -0.191 0.476 1.510 -2.761 -1.514 9 F_DC7:DG27_F F 7 ? F 27 ? 19 1 1 C DT 13 1_555 C DA 31 1_555 -0.111 -0.146 0.470 -1.246 -4.229 -2.583 10 F_DT8:DA26_F F 8 ? F 26 ? 20 1 1 C DT 14 1_555 C DA 30 1_555 -0.152 -0.157 0.519 -0.160 -3.883 -2.531 11 F_DT9:DA25_F F 9 ? F 25 ? 20 1 1 C DC 15 1_555 C DG 29 1_555 0.185 -0.180 0.512 -1.602 -3.573 -0.196 12 F_DC10:DG24_F F 10 ? F 24 ? 19 1 1 C DG 16 1_555 C DC 28 1_555 -0.193 -0.131 0.113 -3.676 -1.542 -0.392 13 F_DG11:DC23_F F 11 ? F 23 ? 19 1 1 C DG 17 1_555 C DC 27 1_555 -0.182 -0.138 -0.219 -4.078 1.332 -0.675 14 F_DG12:DC22_F F 12 ? F 22 ? 19 1 1 C DT 18 1_555 C DA 26 1_555 -0.053 -0.140 0.158 -0.508 1.342 -0.219 15 F_DT13:DA21_F F 13 ? F 21 ? 20 1 1 C DG 19 1_555 C DC 25 1_555 -0.153 -0.147 0.444 2.642 -0.481 -1.318 16 F_DG14:DC20_F F 14 ? F 20 ? 19 1 1 C DC 20 1_555 C DG 24 1_555 0.170 -0.243 0.749 -0.040 -2.589 1.108 17 F_DC15:DG19_F F 15 ? F 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 4 1_555 C DA 40 1_555 C DT 5 1_555 C DA 39 1_555 -0.319 -1.809 3.504 -2.178 2.315 24.678 -4.929 0.053 3.338 5.388 5.070 24.879 1 FF_DT-1DT0:DA34DA35_FF F -1 ? F 35 ? F 0 ? F 34 ? 1 C DT 5 1_555 C DA 39 1_555 C DC 6 1_555 C DG 38 1_555 -0.839 -1.178 3.467 -3.478 14.313 30.429 -4.354 0.881 2.732 25.479 6.191 33.730 2 FF_DT0DC1:DG33DA34_FF F 0 ? F 34 ? F 1 ? F 33 ? 1 C DC 6 1_555 C DG 38 1_555 C OMC 7 1_555 C DG 37 1_555 -0.195 -1.623 3.304 -0.951 5.546 28.039 -4.501 0.187 2.940 11.302 1.938 28.587 3 FF_DC1OMC2:DG32DG33_FF F 1 ? F 33 ? F 2 ? F 32 ? 1 C OMC 7 1_555 C DG 37 1_555 C DC 8 1_555 C DG 36 1_555 -0.549 -1.693 3.565 -1.575 14.080 34.451 -4.532 0.651 2.713 22.624 2.531 37.169 4 FF_OMC2DC3:DG31DG32_FF F 2 ? F 32 ? F 3 ? F 31 ? 1 C DC 8 1_555 C DG 36 1_555 C OMC 9 1_555 C DG 35 1_555 0.561 -1.332 3.380 1.149 -2.359 30.501 -2.033 -0.824 3.489 -4.474 -2.179 30.611 5 FF_DC3OMC4:DG30DG31_FF F 3 ? F 31 ? F 4 ? F 30 ? 1 C OMC 9 1_555 C DG 35 1_555 C DC 10 1_555 C DG 34 1_555 -0.157 -1.971 3.409 -2.746 12.995 30.999 -5.374 -0.146 2.416 23.033 4.868 33.660 6 FF_OMC4DC5:DG29DG30_FF F 4 ? F 30 ? F 5 ? F 29 ? 1 C DC 10 1_555 C DG 34 1_555 C DC 11 1_555 C DG 33 1_555 -0.134 -1.238 3.138 2.451 6.917 31.536 -3.343 0.638 2.793 12.515 -4.436 32.357 7 FF_DC5DC6:DG28DG29_FF F 5 ? F 29 ? F 6 ? F 28 ? 1 C DC 11 1_555 C DG 33 1_555 C DC 12 1_555 C DG 32 1_555 0.333 -0.915 3.250 3.438 2.523 38.121 -1.705 -0.081 3.202 3.848 -5.244 38.350 8 FF_DC6DC7:DG27DG28_FF F 6 ? F 28 ? F 7 ? F 27 ? 1 C DC 12 1_555 C DG 32 1_555 C DT 13 1_555 C DA 31 1_555 -0.237 -0.950 3.298 2.403 0.746 30.863 -1.924 0.909 3.247 1.398 -4.507 30.963 9 FF_DC7DT8:DA26DG27_FF F 7 ? F 27 ? F 8 ? F 26 ? 1 C DT 13 1_555 C DA 31 1_555 C DT 14 1_555 C DA 30 1_555 -0.208 -0.642 3.301 0.831 1.800 36.099 -1.289 0.453 3.261 2.902 -1.339 36.152 10 FF_DT8DT9:DA25DA26_FF F 8 ? F 26 ? F 9 ? F 25 ? 1 C DT 14 1_555 C DA 30 1_555 C DC 15 1_555 C DG 29 1_555 0.553 -0.275 3.246 0.287 0.995 34.092 -0.625 -0.898 3.241 1.697 -0.489 34.108 11 FF_DT9DC10:DG24DA25_FF F 9 ? F 25 ? F 10 ? F 24 ? 1 C DC 15 1_555 C DG 29 1_555 C DG 16 1_555 C DC 28 1_555 -0.206 0.311 3.399 -0.530 1.048 36.131 0.347 0.255 3.409 1.689 0.854 36.149 12 FF_DC10DG11:DC23DG24_FF F 10 ? F 24 ? F 11 ? F 23 ? 1 C DG 16 1_555 C DC 28 1_555 C DG 17 1_555 C DC 27 1_555 -0.418 -0.170 3.433 -1.884 1.600 35.323 -0.528 0.396 3.440 2.633 3.101 35.407 13 FF_DG11DG12:DC22DC23_FF F 11 ? F 23 ? F 12 ? F 22 ? 1 C DG 17 1_555 C DC 27 1_555 C DT 18 1_555 C DA 26 1_555 -0.142 -0.722 3.308 -1.122 3.340 29.105 -2.148 0.039 3.210 6.615 2.223 29.313 14 FF_DG12DT13:DA21DC22_FF F 12 ? F 22 ? F 13 ? F 21 ? 1 C DT 18 1_555 C DA 26 1_555 C DG 19 1_555 C DC 25 1_555 0.292 -0.205 3.158 -0.856 2.294 33.807 -0.707 -0.633 3.130 3.939 1.469 33.893 15 FF_DT13DG14:DC20DA21_FF F 13 ? F 21 ? F 14 ? F 20 ? 1 C DG 19 1_555 C DC 25 1_555 C DC 20 1_555 C DG 24 1_555 0.758 0.079 3.476 1.243 -1.261 40.407 0.265 -0.948 3.493 -1.825 -1.799 40.444 16 FF_DG14DC15:DG19DC20_FF F 14 ? F 20 ? F 15 ? F 19 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' AI175067 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM082251 2 # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8VBF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ #