data_8VF5 # _entry.id 8VF5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VF5 pdb_00008vf5 10.2210/pdb8vf5/pdb WWPDB D_1000280093 ? ? EMDB EMD-43186 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-10 ? 2 'EM metadata' 1 0 2025-12-10 ? 3 'Additional map' 1 0 2025-12-10 1 4 'Additional map' 1 0 2025-12-10 2 5 FSC 1 0 2025-12-10 ? 6 'Half map' 1 0 2025-12-10 1 7 'Half map' 1 0 2025-12-10 2 8 Image 1 0 2025-12-10 ? 9 Mask 1 0 2025-12-10 1 10 'Primary map' 1 0 2025-12-10 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Additional map' repository 'Initial release' ? ? 5 5 FSC repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 'Half map' repository 'Initial release' ? ? 8 8 Image repository 'Initial release' ? ? 9 9 Mask repository 'Initial release' ? ? 10 10 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VF5 _pdbx_database_status.recvd_initial_deposition_date 2023-12-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-43184 'other EM volume' EMDB 'CryoEM structure of Ku homodimer in complex with linear DNA' EMD-43186 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 isabelle.rouiller@unimelb.edu.au Isabelle Rouiller ? 'principal investigator/group leader' 0000-0002-1288-8575 4 amitk@bt.iitkgp.ac.in Amit Das Kumar 'principal investigator/group leader' 0000-0001-9703-1898 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Baral, J.' 1 0000-0002-3633-7823 'Rouiller, I.' 2 0000-0002-1288-8575 'Das, A.K.' 3 0000-0001-9703-1898 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'First cryoEM structure of bacterial Ku in complex with DNA' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Baral, J.' 1 0000-0002-3633-7823 primary 'Rouiller, I.' 2 0000-0002-1288-8575 primary 'Das, A.K.' 3 0000-0001-9703-1898 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-homologous end joining protein Ku' 33609.898 2 ? ? ? ? 2 polymer syn 'DNA (40-MER)' 12239.797 1 ? ? ? ? 3 polymer syn 'DNA (40-MER)' 12391.956 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Mt-Ku # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYR DLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIV HFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQ LQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP ; ;MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYR DLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIV HFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQ LQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP ; A,B ? 2 polydeoxyribonucleotide no no ;(DC)(DC)(DC)(DC)(DC)(DC)(DT)(DG)(DT)(DC)(DG)(DC)(DC)(DG)(DC)(DC)(DG)(DA)(DC)(DG) (DT)(DC)(DT)(DG)(DT)(DG)(DA)(DT)(DA)(DT)(DG)(DG)(DC)(DG)(DT)(DT)(DG)(DT)(DT)(DG) ; CCCCCCTGTCGCCGCCGACGTCTGTGATATGGCGTTGTTG G ? 3 polydeoxyribonucleotide no no ;(DC)(DA)(DA)(DC)(DA)(DA)(DC)(DG)(DC)(DC)(DA)(DT)(DA)(DT)(DC)(DA)(DC)(DA)(DG)(DA) (DC)(DG)(DT)(DC)(DG)(DG)(DC)(DG)(DG)(DC)(DG)(DA)(DC)(DA)(DG)(DG)(DG)(DG)(DG)(DG) ; CAACAACGCCATATCACAGACGTCGGCGGCGACAGGGGGG H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 SER n 1 14 SER n 1 15 GLY n 1 16 HIS n 1 17 ILE n 1 18 GLU n 1 19 GLY n 1 20 ARG n 1 21 HIS n 1 22 MET n 1 23 MET n 1 24 ARG n 1 25 ALA n 1 26 ILE n 1 27 TRP n 1 28 THR n 1 29 GLY n 1 30 SER n 1 31 ILE n 1 32 ALA n 1 33 PHE n 1 34 GLY n 1 35 LEU n 1 36 VAL n 1 37 ASN n 1 38 VAL n 1 39 PRO n 1 40 VAL n 1 41 LYS n 1 42 VAL n 1 43 TYR n 1 44 SER n 1 45 ALA n 1 46 THR n 1 47 ALA n 1 48 ASP n 1 49 HIS n 1 50 ASP n 1 51 ILE n 1 52 ARG n 1 53 PHE n 1 54 HIS n 1 55 GLN n 1 56 VAL n 1 57 HIS n 1 58 ALA n 1 59 LYS n 1 60 ASP n 1 61 ASN n 1 62 GLY n 1 63 ARG n 1 64 ILE n 1 65 ARG n 1 66 TYR n 1 67 LYS n 1 68 ARG n 1 69 VAL n 1 70 CYS n 1 71 GLU n 1 72 ALA n 1 73 CYS n 1 74 GLY n 1 75 GLU n 1 76 VAL n 1 77 VAL n 1 78 ASP n 1 79 TYR n 1 80 ARG n 1 81 ASP n 1 82 LEU n 1 83 ALA n 1 84 ARG n 1 85 ALA n 1 86 TYR n 1 87 GLU n 1 88 SER n 1 89 GLY n 1 90 ASP n 1 91 GLY n 1 92 GLN n 1 93 MET n 1 94 VAL n 1 95 ALA n 1 96 ILE n 1 97 THR n 1 98 ASP n 1 99 ASP n 1 100 ASP n 1 101 ILE n 1 102 ALA n 1 103 SER n 1 104 LEU n 1 105 PRO n 1 106 GLU n 1 107 GLU n 1 108 ARG n 1 109 SER n 1 110 ARG n 1 111 GLU n 1 112 ILE n 1 113 GLU n 1 114 VAL n 1 115 LEU n 1 116 GLU n 1 117 PHE n 1 118 VAL n 1 119 PRO n 1 120 ALA n 1 121 ALA n 1 122 ASP n 1 123 VAL n 1 124 ASP n 1 125 PRO n 1 126 MET n 1 127 MET n 1 128 PHE n 1 129 ASP n 1 130 ARG n 1 131 SER n 1 132 TYR n 1 133 PHE n 1 134 LEU n 1 135 GLU n 1 136 PRO n 1 137 ASP n 1 138 SER n 1 139 LYS n 1 140 SER n 1 141 SER n 1 142 LYS n 1 143 SER n 1 144 TYR n 1 145 VAL n 1 146 LEU n 1 147 LEU n 1 148 ALA n 1 149 LYS n 1 150 THR n 1 151 LEU n 1 152 ALA n 1 153 GLU n 1 154 THR n 1 155 ASP n 1 156 ARG n 1 157 MET n 1 158 ALA n 1 159 ILE n 1 160 VAL n 1 161 HIS n 1 162 PHE n 1 163 THR n 1 164 LEU n 1 165 ARG n 1 166 ASN n 1 167 LYS n 1 168 THR n 1 169 ARG n 1 170 LEU n 1 171 ALA n 1 172 ALA n 1 173 LEU n 1 174 ARG n 1 175 VAL n 1 176 LYS n 1 177 ASP n 1 178 PHE n 1 179 GLY n 1 180 LYS n 1 181 ARG n 1 182 GLU n 1 183 VAL n 1 184 MET n 1 185 MET n 1 186 VAL n 1 187 HIS n 1 188 THR n 1 189 LEU n 1 190 LEU n 1 191 TRP n 1 192 PRO n 1 193 ASP n 1 194 GLU n 1 195 ILE n 1 196 ARG n 1 197 ASP n 1 198 PRO n 1 199 ASP n 1 200 PHE n 1 201 PRO n 1 202 VAL n 1 203 LEU n 1 204 ASP n 1 205 GLN n 1 206 LYS n 1 207 VAL n 1 208 GLU n 1 209 ILE n 1 210 LYS n 1 211 PRO n 1 212 ALA n 1 213 GLU n 1 214 LEU n 1 215 LYS n 1 216 MET n 1 217 ALA n 1 218 GLY n 1 219 GLN n 1 220 VAL n 1 221 VAL n 1 222 ASP n 1 223 SER n 1 224 MET n 1 225 ALA n 1 226 ASP n 1 227 ASP n 1 228 PHE n 1 229 ASN n 1 230 PRO n 1 231 ASP n 1 232 ARG n 1 233 TYR n 1 234 HIS n 1 235 ASP n 1 236 THR n 1 237 TYR n 1 238 GLN n 1 239 GLU n 1 240 GLN n 1 241 LEU n 1 242 GLN n 1 243 GLU n 1 244 LEU n 1 245 ILE n 1 246 ASP n 1 247 THR n 1 248 LYS n 1 249 LEU n 1 250 GLU n 1 251 GLY n 1 252 GLY n 1 253 GLN n 1 254 ALA n 1 255 PHE n 1 256 THR n 1 257 ALA n 1 258 GLU n 1 259 ASP n 1 260 GLN n 1 261 PRO n 1 262 ARG n 1 263 LEU n 1 264 LEU n 1 265 ASP n 1 266 GLU n 1 267 PRO n 1 268 GLU n 1 269 ASP n 1 270 VAL n 1 271 SER n 1 272 ASP n 1 273 LEU n 1 274 LEU n 1 275 ALA n 1 276 LYS n 1 277 LEU n 1 278 GLU n 1 279 ALA n 1 280 SER n 1 281 VAL n 1 282 LYS n 1 283 ALA n 1 284 ARG n 1 285 SER n 1 286 LYS n 1 287 ALA n 1 288 ASN n 1 289 SER n 1 290 ASN n 1 291 VAL n 1 292 PRO n 1 293 THR n 1 294 PRO n 1 295 PRO n 2 1 DC n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DC n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DG n 2 12 DC n 2 13 DC n 2 14 DG n 2 15 DC n 2 16 DC n 2 17 DG n 2 18 DA n 2 19 DC n 2 20 DG n 2 21 DT n 2 22 DC n 2 23 DT n 2 24 DG n 2 25 DT n 2 26 DG n 2 27 DA n 2 28 DT n 2 29 DA n 2 30 DT n 2 31 DG n 2 32 DG n 2 33 DC n 2 34 DG n 2 35 DT n 2 36 DT n 2 37 DG n 2 38 DT n 2 39 DT n 2 40 DG n 3 1 DC n 3 2 DA n 3 3 DA n 3 4 DC n 3 5 DA n 3 6 DA n 3 7 DC n 3 8 DG n 3 9 DC n 3 10 DC n 3 11 DA n 3 12 DT n 3 13 DA n 3 14 DT n 3 15 DC n 3 16 DA n 3 17 DC n 3 18 DA n 3 19 DG n 3 20 DA n 3 21 DC n 3 22 DG n 3 23 DT n 3 24 DC n 3 25 DG n 3 26 DG n 3 27 DC n 3 28 DG n 3 29 DG n 3 30 DC n 3 31 DG n 3 32 DA n 3 33 DC n 3 34 DA n 3 35 DG n 3 36 DG n 3 37 DG n 3 38 DG n 3 39 DG n 3 40 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 295 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mku, Rv0937c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis H37Rv' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant C43 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 40 'synthetic construct' ? 32360 ? 3 1 sample 1 40 'synthetic construct' ? 32360 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 GLY 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 HIS 11 -11 ? ? ? A . n A 1 12 HIS 12 -10 ? ? ? A . n A 1 13 SER 13 -9 ? ? ? A . n A 1 14 SER 14 -8 ? ? ? A . n A 1 15 GLY 15 -7 ? ? ? A . n A 1 16 HIS 16 -6 ? ? ? A . n A 1 17 ILE 17 -5 ? ? ? A . n A 1 18 GLU 18 -4 ? ? ? A . n A 1 19 GLY 19 -3 ? ? ? A . n A 1 20 ARG 20 -2 ? ? ? A . n A 1 21 HIS 21 -1 ? ? ? A . n A 1 22 MET 22 0 ? ? ? A . n A 1 23 MET 23 1 1 MET MET A . n A 1 24 ARG 24 2 2 ARG ARG A . n A 1 25 ALA 25 3 3 ALA ALA A . n A 1 26 ILE 26 4 4 ILE ILE A . n A 1 27 TRP 27 5 5 TRP TRP A . n A 1 28 THR 28 6 6 THR THR A . n A 1 29 GLY 29 7 7 GLY GLY A . n A 1 30 SER 30 8 8 SER SER A . n A 1 31 ILE 31 9 9 ILE ILE A . n A 1 32 ALA 32 10 10 ALA ALA A . n A 1 33 PHE 33 11 11 PHE PHE A . n A 1 34 GLY 34 12 12 GLY GLY A . n A 1 35 LEU 35 13 13 LEU LEU A . n A 1 36 VAL 36 14 14 VAL VAL A . n A 1 37 ASN 37 15 15 ASN ASN A . n A 1 38 VAL 38 16 16 VAL VAL A . n A 1 39 PRO 39 17 17 PRO PRO A . n A 1 40 VAL 40 18 18 VAL VAL A . n A 1 41 LYS 41 19 19 LYS LYS A . n A 1 42 VAL 42 20 20 VAL VAL A . n A 1 43 TYR 43 21 21 TYR TYR A . n A 1 44 SER 44 22 22 SER SER A . n A 1 45 ALA 45 23 23 ALA ALA A . n A 1 46 THR 46 24 24 THR THR A . n A 1 47 ALA 47 25 25 ALA ALA A . n A 1 48 ASP 48 26 26 ASP ASP A . n A 1 49 HIS 49 27 27 HIS HIS A . n A 1 50 ASP 50 28 28 ASP ASP A . n A 1 51 ILE 51 29 29 ILE ILE A . n A 1 52 ARG 52 30 30 ARG ARG A . n A 1 53 PHE 53 31 31 PHE PHE A . n A 1 54 HIS 54 32 32 HIS HIS A . n A 1 55 GLN 55 33 33 GLN GLN A . n A 1 56 VAL 56 34 34 VAL VAL A . n A 1 57 HIS 57 35 35 HIS HIS A . n A 1 58 ALA 58 36 36 ALA ALA A . n A 1 59 LYS 59 37 37 LYS LYS A . n A 1 60 ASP 60 38 38 ASP ASP A . n A 1 61 ASN 61 39 39 ASN ASN A . n A 1 62 GLY 62 40 40 GLY GLY A . n A 1 63 ARG 63 41 41 ARG ARG A . n A 1 64 ILE 64 42 42 ILE ILE A . n A 1 65 ARG 65 43 43 ARG ARG A . n A 1 66 TYR 66 44 44 TYR TYR A . n A 1 67 LYS 67 45 45 LYS LYS A . n A 1 68 ARG 68 46 46 ARG ARG A . n A 1 69 VAL 69 47 47 VAL VAL A . n A 1 70 CYS 70 48 48 CYS CYS A . n A 1 71 GLU 71 49 49 GLU GLU A . n A 1 72 ALA 72 50 50 ALA ALA A . n A 1 73 CYS 73 51 51 CYS CYS A . n A 1 74 GLY 74 52 52 GLY GLY A . n A 1 75 GLU 75 53 53 GLU GLU A . n A 1 76 VAL 76 54 54 VAL VAL A . n A 1 77 VAL 77 55 55 VAL VAL A . n A 1 78 ASP 78 56 56 ASP ASP A . n A 1 79 TYR 79 57 57 TYR TYR A . n A 1 80 ARG 80 58 58 ARG ARG A . n A 1 81 ASP 81 59 59 ASP ASP A . n A 1 82 LEU 82 60 60 LEU LEU A . n A 1 83 ALA 83 61 61 ALA ALA A . n A 1 84 ARG 84 62 62 ARG ARG A . n A 1 85 ALA 85 63 63 ALA ALA A . n A 1 86 TYR 86 64 64 TYR TYR A . n A 1 87 GLU 87 65 65 GLU GLU A . n A 1 88 SER 88 66 66 SER SER A . n A 1 89 GLY 89 67 67 GLY GLY A . n A 1 90 ASP 90 68 68 ASP ASP A . n A 1 91 GLY 91 69 69 GLY GLY A . n A 1 92 GLN 92 70 70 GLN GLN A . n A 1 93 MET 93 71 71 MET MET A . n A 1 94 VAL 94 72 72 VAL VAL A . n A 1 95 ALA 95 73 73 ALA ALA A . n A 1 96 ILE 96 74 74 ILE ILE A . n A 1 97 THR 97 75 75 THR THR A . n A 1 98 ASP 98 76 76 ASP ASP A . n A 1 99 ASP 99 77 77 ASP ASP A . n A 1 100 ASP 100 78 78 ASP ASP A . n A 1 101 ILE 101 79 79 ILE ILE A . n A 1 102 ALA 102 80 80 ALA ALA A . n A 1 103 SER 103 81 81 SER SER A . n A 1 104 LEU 104 82 82 LEU LEU A . n A 1 105 PRO 105 83 83 PRO PRO A . n A 1 106 GLU 106 84 84 GLU GLU A . n A 1 107 GLU 107 85 85 GLU GLU A . n A 1 108 ARG 108 86 86 ARG ARG A . n A 1 109 SER 109 87 87 SER SER A . n A 1 110 ARG 110 88 88 ARG ARG A . n A 1 111 GLU 111 89 89 GLU GLU A . n A 1 112 ILE 112 90 90 ILE ILE A . n A 1 113 GLU 113 91 91 GLU GLU A . n A 1 114 VAL 114 92 92 VAL VAL A . n A 1 115 LEU 115 93 93 LEU LEU A . n A 1 116 GLU 116 94 94 GLU GLU A . n A 1 117 PHE 117 95 95 PHE PHE A . n A 1 118 VAL 118 96 96 VAL VAL A . n A 1 119 PRO 119 97 97 PRO PRO A . n A 1 120 ALA 120 98 98 ALA ALA A . n A 1 121 ALA 121 99 99 ALA ALA A . n A 1 122 ASP 122 100 100 ASP ASP A . n A 1 123 VAL 123 101 101 VAL VAL A . n A 1 124 ASP 124 102 102 ASP ASP A . n A 1 125 PRO 125 103 103 PRO PRO A . n A 1 126 MET 126 104 104 MET MET A . n A 1 127 MET 127 105 105 MET MET A . n A 1 128 PHE 128 106 106 PHE PHE A . n A 1 129 ASP 129 107 107 ASP ASP A . n A 1 130 ARG 130 108 108 ARG ARG A . n A 1 131 SER 131 109 109 SER SER A . n A 1 132 TYR 132 110 110 TYR TYR A . n A 1 133 PHE 133 111 111 PHE PHE A . n A 1 134 LEU 134 112 112 LEU LEU A . n A 1 135 GLU 135 113 113 GLU GLU A . n A 1 136 PRO 136 114 114 PRO PRO A . n A 1 137 ASP 137 115 115 ASP ASP A . n A 1 138 SER 138 116 116 SER SER A . n A 1 139 LYS 139 117 117 LYS LYS A . n A 1 140 SER 140 118 118 SER SER A . n A 1 141 SER 141 119 119 SER SER A . n A 1 142 LYS 142 120 120 LYS LYS A . n A 1 143 SER 143 121 121 SER SER A . n A 1 144 TYR 144 122 122 TYR TYR A . n A 1 145 VAL 145 123 123 VAL VAL A . n A 1 146 LEU 146 124 124 LEU LEU A . n A 1 147 LEU 147 125 125 LEU LEU A . n A 1 148 ALA 148 126 126 ALA ALA A . n A 1 149 LYS 149 127 127 LYS LYS A . n A 1 150 THR 150 128 128 THR THR A . n A 1 151 LEU 151 129 129 LEU LEU A . n A 1 152 ALA 152 130 130 ALA ALA A . n A 1 153 GLU 153 131 131 GLU GLU A . n A 1 154 THR 154 132 132 THR THR A . n A 1 155 ASP 155 133 133 ASP ASP A . n A 1 156 ARG 156 134 134 ARG ARG A . n A 1 157 MET 157 135 135 MET MET A . n A 1 158 ALA 158 136 136 ALA ALA A . n A 1 159 ILE 159 137 137 ILE ILE A . n A 1 160 VAL 160 138 138 VAL VAL A . n A 1 161 HIS 161 139 139 HIS HIS A . n A 1 162 PHE 162 140 140 PHE PHE A . n A 1 163 THR 163 141 141 THR THR A . n A 1 164 LEU 164 142 142 LEU LEU A . n A 1 165 ARG 165 143 143 ARG ARG A . n A 1 166 ASN 166 144 144 ASN ASN A . n A 1 167 LYS 167 145 145 LYS LYS A . n A 1 168 THR 168 146 146 THR THR A . n A 1 169 ARG 169 147 147 ARG ARG A . n A 1 170 LEU 170 148 148 LEU LEU A . n A 1 171 ALA 171 149 149 ALA ALA A . n A 1 172 ALA 172 150 150 ALA ALA A . n A 1 173 LEU 173 151 151 LEU LEU A . n A 1 174 ARG 174 152 152 ARG ARG A . n A 1 175 VAL 175 153 153 VAL VAL A . n A 1 176 LYS 176 154 154 LYS LYS A . n A 1 177 ASP 177 155 155 ASP ASP A . n A 1 178 PHE 178 156 156 PHE PHE A . n A 1 179 GLY 179 157 157 GLY GLY A . n A 1 180 LYS 180 158 158 LYS LYS A . n A 1 181 ARG 181 159 159 ARG ARG A . n A 1 182 GLU 182 160 160 GLU GLU A . n A 1 183 VAL 183 161 161 VAL VAL A . n A 1 184 MET 184 162 162 MET MET A . n A 1 185 MET 185 163 163 MET MET A . n A 1 186 VAL 186 164 164 VAL VAL A . n A 1 187 HIS 187 165 165 HIS HIS A . n A 1 188 THR 188 166 166 THR THR A . n A 1 189 LEU 189 167 167 LEU LEU A . n A 1 190 LEU 190 168 168 LEU LEU A . n A 1 191 TRP 191 169 169 TRP TRP A . n A 1 192 PRO 192 170 170 PRO PRO A . n A 1 193 ASP 193 171 171 ASP ASP A . n A 1 194 GLU 194 172 172 GLU GLU A . n A 1 195 ILE 195 173 173 ILE ILE A . n A 1 196 ARG 196 174 174 ARG ARG A . n A 1 197 ASP 197 175 175 ASP ASP A . n A 1 198 PRO 198 176 176 PRO PRO A . n A 1 199 ASP 199 177 177 ASP ASP A . n A 1 200 PHE 200 178 178 PHE PHE A . n A 1 201 PRO 201 179 179 PRO PRO A . n A 1 202 VAL 202 180 180 VAL VAL A . n A 1 203 LEU 203 181 181 LEU LEU A . n A 1 204 ASP 204 182 182 ASP ASP A . n A 1 205 GLN 205 183 183 GLN GLN A . n A 1 206 LYS 206 184 184 LYS LYS A . n A 1 207 VAL 207 185 185 VAL VAL A . n A 1 208 GLU 208 186 186 GLU GLU A . n A 1 209 ILE 209 187 187 ILE ILE A . n A 1 210 LYS 210 188 188 LYS LYS A . n A 1 211 PRO 211 189 189 PRO PRO A . n A 1 212 ALA 212 190 190 ALA ALA A . n A 1 213 GLU 213 191 191 GLU GLU A . n A 1 214 LEU 214 192 192 LEU LEU A . n A 1 215 LYS 215 193 193 LYS LYS A . n A 1 216 MET 216 194 194 MET MET A . n A 1 217 ALA 217 195 195 ALA ALA A . n A 1 218 GLY 218 196 196 GLY GLY A . n A 1 219 GLN 219 197 197 GLN GLN A . n A 1 220 VAL 220 198 198 VAL VAL A . n A 1 221 VAL 221 199 199 VAL VAL A . n A 1 222 ASP 222 200 200 ASP ASP A . n A 1 223 SER 223 201 201 SER SER A . n A 1 224 MET 224 202 202 MET MET A . n A 1 225 ALA 225 203 203 ALA ALA A . n A 1 226 ASP 226 204 204 ASP ASP A . n A 1 227 ASP 227 205 205 ASP ASP A . n A 1 228 PHE 228 206 206 PHE PHE A . n A 1 229 ASN 229 207 207 ASN ASN A . n A 1 230 PRO 230 208 208 PRO PRO A . n A 1 231 ASP 231 209 209 ASP ASP A . n A 1 232 ARG 232 210 210 ARG ARG A . n A 1 233 TYR 233 211 211 TYR TYR A . n A 1 234 HIS 234 212 212 HIS HIS A . n A 1 235 ASP 235 213 213 ASP ASP A . n A 1 236 THR 236 214 214 THR THR A . n A 1 237 TYR 237 215 215 TYR TYR A . n A 1 238 GLN 238 216 216 GLN GLN A . n A 1 239 GLU 239 217 217 GLU GLU A . n A 1 240 GLN 240 218 218 GLN GLN A . n A 1 241 LEU 241 219 219 LEU LEU A . n A 1 242 GLN 242 220 220 GLN GLN A . n A 1 243 GLU 243 221 221 GLU GLU A . n A 1 244 LEU 244 222 222 LEU LEU A . n A 1 245 ILE 245 223 223 ILE ILE A . n A 1 246 ASP 246 224 224 ASP ASP A . n A 1 247 THR 247 225 225 THR THR A . n A 1 248 LYS 248 226 226 LYS LYS A . n A 1 249 LEU 249 227 ? ? ? A . n A 1 250 GLU 250 228 ? ? ? A . n A 1 251 GLY 251 229 ? ? ? A . n A 1 252 GLY 252 230 ? ? ? A . n A 1 253 GLN 253 231 ? ? ? A . n A 1 254 ALA 254 232 ? ? ? A . n A 1 255 PHE 255 233 ? ? ? A . n A 1 256 THR 256 234 ? ? ? A . n A 1 257 ALA 257 235 ? ? ? A . n A 1 258 GLU 258 236 ? ? ? A . n A 1 259 ASP 259 237 ? ? ? A . n A 1 260 GLN 260 238 ? ? ? A . n A 1 261 PRO 261 239 ? ? ? A . n A 1 262 ARG 262 240 ? ? ? A . n A 1 263 LEU 263 241 ? ? ? A . n A 1 264 LEU 264 242 ? ? ? A . n A 1 265 ASP 265 243 ? ? ? A . n A 1 266 GLU 266 244 ? ? ? A . n A 1 267 PRO 267 245 ? ? ? A . n A 1 268 GLU 268 246 ? ? ? A . n A 1 269 ASP 269 247 ? ? ? A . n A 1 270 VAL 270 248 ? ? ? A . n A 1 271 SER 271 249 ? ? ? A . n A 1 272 ASP 272 250 ? ? ? A . n A 1 273 LEU 273 251 ? ? ? A . n A 1 274 LEU 274 252 ? ? ? A . n A 1 275 ALA 275 253 ? ? ? A . n A 1 276 LYS 276 254 ? ? ? A . n A 1 277 LEU 277 255 ? ? ? A . n A 1 278 GLU 278 256 ? ? ? A . n A 1 279 ALA 279 257 ? ? ? A . n A 1 280 SER 280 258 ? ? ? A . n A 1 281 VAL 281 259 ? ? ? A . n A 1 282 LYS 282 260 ? ? ? A . n A 1 283 ALA 283 261 ? ? ? A . n A 1 284 ARG 284 262 ? ? ? A . n A 1 285 SER 285 263 ? ? ? A . n A 1 286 LYS 286 264 ? ? ? A . n A 1 287 ALA 287 265 ? ? ? A . n A 1 288 ASN 288 266 ? ? ? A . n A 1 289 SER 289 267 ? ? ? A . n A 1 290 ASN 290 268 ? ? ? A . n A 1 291 VAL 291 269 ? ? ? A . n A 1 292 PRO 292 270 ? ? ? A . n A 1 293 THR 293 271 ? ? ? A . n A 1 294 PRO 294 272 ? ? ? A . n A 1 295 PRO 295 273 ? ? ? A . n B 1 1 MET 1 -21 ? ? ? B . n B 1 2 GLY 2 -20 ? ? ? B . n B 1 3 HIS 3 -19 ? ? ? B . n B 1 4 HIS 4 -18 ? ? ? B . n B 1 5 HIS 5 -17 ? ? ? B . n B 1 6 HIS 6 -16 ? ? ? B . n B 1 7 HIS 7 -15 ? ? ? B . n B 1 8 HIS 8 -14 ? ? ? B . n B 1 9 HIS 9 -13 ? ? ? B . n B 1 10 HIS 10 -12 ? ? ? B . n B 1 11 HIS 11 -11 ? ? ? B . n B 1 12 HIS 12 -10 ? ? ? B . n B 1 13 SER 13 -9 ? ? ? B . n B 1 14 SER 14 -8 ? ? ? B . n B 1 15 GLY 15 -7 ? ? ? B . n B 1 16 HIS 16 -6 ? ? ? B . n B 1 17 ILE 17 -5 ? ? ? B . n B 1 18 GLU 18 -4 ? ? ? B . n B 1 19 GLY 19 -3 ? ? ? B . n B 1 20 ARG 20 -2 ? ? ? B . n B 1 21 HIS 21 -1 ? ? ? B . n B 1 22 MET 22 0 ? ? ? B . n B 1 23 MET 23 1 1 MET MET B . n B 1 24 ARG 24 2 2 ARG ARG B . n B 1 25 ALA 25 3 3 ALA ALA B . n B 1 26 ILE 26 4 4 ILE ILE B . n B 1 27 TRP 27 5 5 TRP TRP B . n B 1 28 THR 28 6 6 THR THR B . n B 1 29 GLY 29 7 7 GLY GLY B . n B 1 30 SER 30 8 8 SER SER B . n B 1 31 ILE 31 9 9 ILE ILE B . n B 1 32 ALA 32 10 10 ALA ALA B . n B 1 33 PHE 33 11 11 PHE PHE B . n B 1 34 GLY 34 12 12 GLY GLY B . n B 1 35 LEU 35 13 13 LEU LEU B . n B 1 36 VAL 36 14 14 VAL VAL B . n B 1 37 ASN 37 15 15 ASN ASN B . n B 1 38 VAL 38 16 16 VAL VAL B . n B 1 39 PRO 39 17 17 PRO PRO B . n B 1 40 VAL 40 18 18 VAL VAL B . n B 1 41 LYS 41 19 19 LYS LYS B . n B 1 42 VAL 42 20 20 VAL VAL B . n B 1 43 TYR 43 21 21 TYR TYR B . n B 1 44 SER 44 22 22 SER SER B . n B 1 45 ALA 45 23 23 ALA ALA B . n B 1 46 THR 46 24 24 THR THR B . n B 1 47 ALA 47 25 25 ALA ALA B . n B 1 48 ASP 48 26 26 ASP ASP B . n B 1 49 HIS 49 27 27 HIS HIS B . n B 1 50 ASP 50 28 28 ASP ASP B . n B 1 51 ILE 51 29 29 ILE ILE B . n B 1 52 ARG 52 30 30 ARG ARG B . n B 1 53 PHE 53 31 31 PHE PHE B . n B 1 54 HIS 54 32 32 HIS HIS B . n B 1 55 GLN 55 33 33 GLN GLN B . n B 1 56 VAL 56 34 34 VAL VAL B . n B 1 57 HIS 57 35 35 HIS HIS B . n B 1 58 ALA 58 36 36 ALA ALA B . n B 1 59 LYS 59 37 37 LYS LYS B . n B 1 60 ASP 60 38 38 ASP ASP B . n B 1 61 ASN 61 39 39 ASN ASN B . n B 1 62 GLY 62 40 40 GLY GLY B . n B 1 63 ARG 63 41 41 ARG ARG B . n B 1 64 ILE 64 42 42 ILE ILE B . n B 1 65 ARG 65 43 43 ARG ARG B . n B 1 66 TYR 66 44 44 TYR TYR B . n B 1 67 LYS 67 45 45 LYS LYS B . n B 1 68 ARG 68 46 46 ARG ARG B . n B 1 69 VAL 69 47 47 VAL VAL B . n B 1 70 CYS 70 48 48 CYS CYS B . n B 1 71 GLU 71 49 49 GLU GLU B . n B 1 72 ALA 72 50 50 ALA ALA B . n B 1 73 CYS 73 51 51 CYS CYS B . n B 1 74 GLY 74 52 52 GLY GLY B . n B 1 75 GLU 75 53 53 GLU GLU B . n B 1 76 VAL 76 54 54 VAL VAL B . n B 1 77 VAL 77 55 55 VAL VAL B . n B 1 78 ASP 78 56 56 ASP ASP B . n B 1 79 TYR 79 57 57 TYR TYR B . n B 1 80 ARG 80 58 58 ARG ARG B . n B 1 81 ASP 81 59 59 ASP ASP B . n B 1 82 LEU 82 60 60 LEU LEU B . n B 1 83 ALA 83 61 61 ALA ALA B . n B 1 84 ARG 84 62 62 ARG ARG B . n B 1 85 ALA 85 63 63 ALA ALA B . n B 1 86 TYR 86 64 64 TYR TYR B . n B 1 87 GLU 87 65 65 GLU GLU B . n B 1 88 SER 88 66 66 SER SER B . n B 1 89 GLY 89 67 67 GLY GLY B . n B 1 90 ASP 90 68 68 ASP ASP B . n B 1 91 GLY 91 69 69 GLY GLY B . n B 1 92 GLN 92 70 70 GLN GLN B . n B 1 93 MET 93 71 71 MET MET B . n B 1 94 VAL 94 72 72 VAL VAL B . n B 1 95 ALA 95 73 73 ALA ALA B . n B 1 96 ILE 96 74 74 ILE ILE B . n B 1 97 THR 97 75 75 THR THR B . n B 1 98 ASP 98 76 76 ASP ASP B . n B 1 99 ASP 99 77 77 ASP ASP B . n B 1 100 ASP 100 78 78 ASP ASP B . n B 1 101 ILE 101 79 79 ILE ILE B . n B 1 102 ALA 102 80 80 ALA ALA B . n B 1 103 SER 103 81 81 SER SER B . n B 1 104 LEU 104 82 82 LEU LEU B . n B 1 105 PRO 105 83 83 PRO PRO B . n B 1 106 GLU 106 84 84 GLU GLU B . n B 1 107 GLU 107 85 85 GLU GLU B . n B 1 108 ARG 108 86 86 ARG ARG B . n B 1 109 SER 109 87 87 SER SER B . n B 1 110 ARG 110 88 88 ARG ARG B . n B 1 111 GLU 111 89 89 GLU GLU B . n B 1 112 ILE 112 90 90 ILE ILE B . n B 1 113 GLU 113 91 91 GLU GLU B . n B 1 114 VAL 114 92 92 VAL VAL B . n B 1 115 LEU 115 93 93 LEU LEU B . n B 1 116 GLU 116 94 94 GLU GLU B . n B 1 117 PHE 117 95 95 PHE PHE B . n B 1 118 VAL 118 96 96 VAL VAL B . n B 1 119 PRO 119 97 97 PRO PRO B . n B 1 120 ALA 120 98 98 ALA ALA B . n B 1 121 ALA 121 99 99 ALA ALA B . n B 1 122 ASP 122 100 100 ASP ASP B . n B 1 123 VAL 123 101 101 VAL VAL B . n B 1 124 ASP 124 102 102 ASP ASP B . n B 1 125 PRO 125 103 103 PRO PRO B . n B 1 126 MET 126 104 104 MET MET B . n B 1 127 MET 127 105 105 MET MET B . n B 1 128 PHE 128 106 106 PHE PHE B . n B 1 129 ASP 129 107 107 ASP ASP B . n B 1 130 ARG 130 108 108 ARG ARG B . n B 1 131 SER 131 109 109 SER SER B . n B 1 132 TYR 132 110 110 TYR TYR B . n B 1 133 PHE 133 111 111 PHE PHE B . n B 1 134 LEU 134 112 112 LEU LEU B . n B 1 135 GLU 135 113 113 GLU GLU B . n B 1 136 PRO 136 114 114 PRO PRO B . n B 1 137 ASP 137 115 115 ASP ASP B . n B 1 138 SER 138 116 116 SER SER B . n B 1 139 LYS 139 117 117 LYS LYS B . n B 1 140 SER 140 118 118 SER SER B . n B 1 141 SER 141 119 119 SER SER B . n B 1 142 LYS 142 120 120 LYS LYS B . n B 1 143 SER 143 121 121 SER SER B . n B 1 144 TYR 144 122 122 TYR TYR B . n B 1 145 VAL 145 123 123 VAL VAL B . n B 1 146 LEU 146 124 124 LEU LEU B . n B 1 147 LEU 147 125 125 LEU LEU B . n B 1 148 ALA 148 126 126 ALA ALA B . n B 1 149 LYS 149 127 127 LYS LYS B . n B 1 150 THR 150 128 128 THR THR B . n B 1 151 LEU 151 129 129 LEU LEU B . n B 1 152 ALA 152 130 130 ALA ALA B . n B 1 153 GLU 153 131 131 GLU GLU B . n B 1 154 THR 154 132 132 THR THR B . n B 1 155 ASP 155 133 133 ASP ASP B . n B 1 156 ARG 156 134 134 ARG ARG B . n B 1 157 MET 157 135 135 MET MET B . n B 1 158 ALA 158 136 136 ALA ALA B . n B 1 159 ILE 159 137 137 ILE ILE B . n B 1 160 VAL 160 138 138 VAL VAL B . n B 1 161 HIS 161 139 139 HIS HIS B . n B 1 162 PHE 162 140 140 PHE PHE B . n B 1 163 THR 163 141 141 THR THR B . n B 1 164 LEU 164 142 142 LEU LEU B . n B 1 165 ARG 165 143 143 ARG ARG B . n B 1 166 ASN 166 144 144 ASN ASN B . n B 1 167 LYS 167 145 145 LYS LYS B . n B 1 168 THR 168 146 146 THR THR B . n B 1 169 ARG 169 147 147 ARG ARG B . n B 1 170 LEU 170 148 148 LEU LEU B . n B 1 171 ALA 171 149 149 ALA ALA B . n B 1 172 ALA 172 150 150 ALA ALA B . n B 1 173 LEU 173 151 151 LEU LEU B . n B 1 174 ARG 174 152 152 ARG ARG B . n B 1 175 VAL 175 153 153 VAL VAL B . n B 1 176 LYS 176 154 154 LYS LYS B . n B 1 177 ASP 177 155 155 ASP ASP B . n B 1 178 PHE 178 156 156 PHE PHE B . n B 1 179 GLY 179 157 157 GLY GLY B . n B 1 180 LYS 180 158 158 LYS LYS B . n B 1 181 ARG 181 159 159 ARG ARG B . n B 1 182 GLU 182 160 160 GLU GLU B . n B 1 183 VAL 183 161 161 VAL VAL B . n B 1 184 MET 184 162 162 MET MET B . n B 1 185 MET 185 163 163 MET MET B . n B 1 186 VAL 186 164 164 VAL VAL B . n B 1 187 HIS 187 165 165 HIS HIS B . n B 1 188 THR 188 166 166 THR THR B . n B 1 189 LEU 189 167 167 LEU LEU B . n B 1 190 LEU 190 168 168 LEU LEU B . n B 1 191 TRP 191 169 169 TRP TRP B . n B 1 192 PRO 192 170 170 PRO PRO B . n B 1 193 ASP 193 171 171 ASP ASP B . n B 1 194 GLU 194 172 172 GLU GLU B . n B 1 195 ILE 195 173 173 ILE ILE B . n B 1 196 ARG 196 174 174 ARG ARG B . n B 1 197 ASP 197 175 175 ASP ASP B . n B 1 198 PRO 198 176 176 PRO PRO B . n B 1 199 ASP 199 177 177 ASP ASP B . n B 1 200 PHE 200 178 178 PHE PHE B . n B 1 201 PRO 201 179 179 PRO PRO B . n B 1 202 VAL 202 180 180 VAL VAL B . n B 1 203 LEU 203 181 181 LEU LEU B . n B 1 204 ASP 204 182 182 ASP ASP B . n B 1 205 GLN 205 183 183 GLN GLN B . n B 1 206 LYS 206 184 184 LYS LYS B . n B 1 207 VAL 207 185 185 VAL VAL B . n B 1 208 GLU 208 186 186 GLU GLU B . n B 1 209 ILE 209 187 187 ILE ILE B . n B 1 210 LYS 210 188 188 LYS LYS B . n B 1 211 PRO 211 189 189 PRO PRO B . n B 1 212 ALA 212 190 190 ALA ALA B . n B 1 213 GLU 213 191 191 GLU GLU B . n B 1 214 LEU 214 192 192 LEU LEU B . n B 1 215 LYS 215 193 193 LYS LYS B . n B 1 216 MET 216 194 194 MET MET B . n B 1 217 ALA 217 195 195 ALA ALA B . n B 1 218 GLY 218 196 196 GLY GLY B . n B 1 219 GLN 219 197 197 GLN GLN B . n B 1 220 VAL 220 198 198 VAL VAL B . n B 1 221 VAL 221 199 199 VAL VAL B . n B 1 222 ASP 222 200 200 ASP ASP B . n B 1 223 SER 223 201 201 SER SER B . n B 1 224 MET 224 202 202 MET MET B . n B 1 225 ALA 225 203 203 ALA ALA B . n B 1 226 ASP 226 204 204 ASP ASP B . n B 1 227 ASP 227 205 205 ASP ASP B . n B 1 228 PHE 228 206 206 PHE PHE B . n B 1 229 ASN 229 207 207 ASN ASN B . n B 1 230 PRO 230 208 208 PRO PRO B . n B 1 231 ASP 231 209 209 ASP ASP B . n B 1 232 ARG 232 210 210 ARG ARG B . n B 1 233 TYR 233 211 211 TYR TYR B . n B 1 234 HIS 234 212 212 HIS HIS B . n B 1 235 ASP 235 213 213 ASP ASP B . n B 1 236 THR 236 214 214 THR THR B . n B 1 237 TYR 237 215 215 TYR TYR B . n B 1 238 GLN 238 216 216 GLN GLN B . n B 1 239 GLU 239 217 217 GLU GLU B . n B 1 240 GLN 240 218 218 GLN GLN B . n B 1 241 LEU 241 219 219 LEU LEU B . n B 1 242 GLN 242 220 220 GLN GLN B . n B 1 243 GLU 243 221 221 GLU GLU B . n B 1 244 LEU 244 222 222 LEU LEU B . n B 1 245 ILE 245 223 223 ILE ILE B . n B 1 246 ASP 246 224 224 ASP ASP B . n B 1 247 THR 247 225 225 THR THR B . n B 1 248 LYS 248 226 226 LYS LYS B . n B 1 249 LEU 249 227 227 LEU LEU B . n B 1 250 GLU 250 228 ? ? ? B . n B 1 251 GLY 251 229 ? ? ? B . n B 1 252 GLY 252 230 ? ? ? B . n B 1 253 GLN 253 231 ? ? ? B . n B 1 254 ALA 254 232 ? ? ? B . n B 1 255 PHE 255 233 ? ? ? B . n B 1 256 THR 256 234 ? ? ? B . n B 1 257 ALA 257 235 ? ? ? B . n B 1 258 GLU 258 236 ? ? ? B . n B 1 259 ASP 259 237 ? ? ? B . n B 1 260 GLN 260 238 ? ? ? B . n B 1 261 PRO 261 239 ? ? ? B . n B 1 262 ARG 262 240 ? ? ? B . n B 1 263 LEU 263 241 ? ? ? B . n B 1 264 LEU 264 242 ? ? ? B . n B 1 265 ASP 265 243 ? ? ? B . n B 1 266 GLU 266 244 ? ? ? B . n B 1 267 PRO 267 245 ? ? ? B . n B 1 268 GLU 268 246 ? ? ? B . n B 1 269 ASP 269 247 ? ? ? B . n B 1 270 VAL 270 248 ? ? ? B . n B 1 271 SER 271 249 ? ? ? B . n B 1 272 ASP 272 250 ? ? ? B . n B 1 273 LEU 273 251 ? ? ? B . n B 1 274 LEU 274 252 ? ? ? B . n B 1 275 ALA 275 253 ? ? ? B . n B 1 276 LYS 276 254 ? ? ? B . n B 1 277 LEU 277 255 ? ? ? B . n B 1 278 GLU 278 256 ? ? ? B . n B 1 279 ALA 279 257 ? ? ? B . n B 1 280 SER 280 258 ? ? ? B . n B 1 281 VAL 281 259 ? ? ? B . n B 1 282 LYS 282 260 ? ? ? B . n B 1 283 ALA 283 261 ? ? ? B . n B 1 284 ARG 284 262 ? ? ? B . n B 1 285 SER 285 263 ? ? ? B . n B 1 286 LYS 286 264 ? ? ? B . n B 1 287 ALA 287 265 ? ? ? B . n B 1 288 ASN 288 266 ? ? ? B . n B 1 289 SER 289 267 ? ? ? B . n B 1 290 ASN 290 268 ? ? ? B . n B 1 291 VAL 291 269 ? ? ? B . n B 1 292 PRO 292 270 ? ? ? B . n B 1 293 THR 293 271 ? ? ? B . n B 1 294 PRO 294 272 ? ? ? B . n B 1 295 PRO 295 273 ? ? ? B . n C 2 1 DC 1 1 1 DC DC G . n C 2 2 DC 2 2 2 DC DC G . n C 2 3 DC 3 3 3 DC DC G . n C 2 4 DC 4 4 4 DC DC G . n C 2 5 DC 5 5 5 DC DC G . n C 2 6 DC 6 6 6 DC DC G . n C 2 7 DT 7 7 7 DT DT G . n C 2 8 DG 8 8 8 DG DG G . n C 2 9 DT 9 9 9 DT DT G . n C 2 10 DC 10 10 10 DC DC G . n C 2 11 DG 11 11 11 DG DG G . n C 2 12 DC 12 12 12 DC DC G . n C 2 13 DC 13 13 13 DC DC G . n C 2 14 DG 14 14 14 DG DG G . n C 2 15 DC 15 15 15 DC DC G . n C 2 16 DC 16 16 16 DC DC G . n C 2 17 DG 17 17 17 DG DG G . n C 2 18 DA 18 18 18 DA DA G . n C 2 19 DC 19 19 19 DC DC G . n C 2 20 DG 20 20 20 DG DG G . n C 2 21 DT 21 21 21 DT DT G . n C 2 22 DC 22 22 ? ? ? G . n C 2 23 DT 23 23 ? ? ? G . n C 2 24 DG 24 24 ? ? ? G . n C 2 25 DT 25 25 ? ? ? G . n C 2 26 DG 26 26 ? ? ? G . n C 2 27 DA 27 27 ? ? ? G . n C 2 28 DT 28 28 ? ? ? G . n C 2 29 DA 29 29 ? ? ? G . n C 2 30 DT 30 30 ? ? ? G . n C 2 31 DG 31 31 ? ? ? G . n C 2 32 DG 32 32 ? ? ? G . n C 2 33 DC 33 33 ? ? ? G . n C 2 34 DG 34 34 ? ? ? G . n C 2 35 DT 35 35 ? ? ? G . n C 2 36 DT 36 36 ? ? ? G . n C 2 37 DG 37 37 ? ? ? G . n C 2 38 DT 38 38 ? ? ? G . n C 2 39 DT 39 39 ? ? ? G . n C 2 40 DG 40 40 ? ? ? G . n D 3 1 DC 1 -6 ? ? ? H . n D 3 2 DA 2 -5 ? ? ? H . n D 3 3 DA 3 -4 ? ? ? H . n D 3 4 DC 4 -3 ? ? ? H . n D 3 5 DA 5 -2 ? ? ? H . n D 3 6 DA 6 -1 ? ? ? H . n D 3 7 DC 7 0 ? ? ? H . n D 3 8 DG 8 1 ? ? ? H . n D 3 9 DC 9 2 ? ? ? H . n D 3 10 DC 10 3 ? ? ? H . n D 3 11 DA 11 4 ? ? ? H . n D 3 12 DT 12 5 ? ? ? H . n D 3 13 DA 13 6 ? ? ? H . n D 3 14 DT 14 7 ? ? ? H . n D 3 15 DC 15 8 ? ? ? H . n D 3 16 DA 16 9 ? ? ? H . n D 3 17 DC 17 10 ? ? ? H . n D 3 18 DA 18 11 ? ? ? H . n D 3 19 DG 19 12 ? ? ? H . n D 3 20 DA 20 13 13 DA DA H . n D 3 21 DC 21 14 14 DC DC H . n D 3 22 DG 22 15 15 DG DG H . n D 3 23 DT 23 16 16 DT DT H . n D 3 24 DC 24 17 17 DC DC H . n D 3 25 DG 25 18 18 DG DG H . n D 3 26 DG 26 19 19 DG DG H . n D 3 27 DC 27 20 20 DC DC H . n D 3 28 DG 28 21 21 DG DG H . n D 3 29 DG 29 22 22 DG DG H . n D 3 30 DC 30 23 23 DC DC H . n D 3 31 DG 31 24 24 DG DG H . n D 3 32 DA 32 25 25 DA DA H . n D 3 33 DC 33 26 26 DC DC H . n D 3 34 DA 34 27 27 DA DA H . n D 3 35 DG 35 28 28 DG DG H . n D 3 36 DG 36 29 29 DG DG H . n D 3 37 DG 37 30 30 DG DG H . n D 3 38 DG 38 31 31 DG DG H . n D 3 39 DG 39 32 32 DG DG H . n D 3 40 DG 40 33 33 DG DG H . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8VF5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VF5 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8VF5 _struct.title 'CryoEM structure of Ku homodimer in complex with linear DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VF5 _struct_keywords.text 'NHEJ, DNA repair, Mycobacterium tuberculosis, DNA synapsis, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP KU_MYCTU P9WKD9 ? 1 ;MRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIA SLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKRE VMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPR LLDEPEDVSDLLAKLEASVKARSKANSNVPTPP ; 1 2 PDB 8VF5 8VF5 ? 2 ? 1 3 PDB 8VF5 8VF5 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VF5 A 23 ? 295 ? P9WKD9 1 ? 273 ? 1 273 2 1 8VF5 B 23 ? 295 ? P9WKD9 1 ? 273 ? 1 273 3 2 8VF5 G 1 ? 40 ? 8VF5 1 ? 40 ? 1 40 4 3 8VF5 H 1 ? 40 ? 8VF5 -6 ? 33 ? -6 33 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8VF5 MET A 1 ? UNP P9WKD9 ? ? 'initiating methionine' -21 1 1 8VF5 GLY A 2 ? UNP P9WKD9 ? ? 'expression tag' -20 2 1 8VF5 HIS A 3 ? UNP P9WKD9 ? ? 'expression tag' -19 3 1 8VF5 HIS A 4 ? UNP P9WKD9 ? ? 'expression tag' -18 4 1 8VF5 HIS A 5 ? UNP P9WKD9 ? ? 'expression tag' -17 5 1 8VF5 HIS A 6 ? UNP P9WKD9 ? ? 'expression tag' -16 6 1 8VF5 HIS A 7 ? UNP P9WKD9 ? ? 'expression tag' -15 7 1 8VF5 HIS A 8 ? UNP P9WKD9 ? ? 'expression tag' -14 8 1 8VF5 HIS A 9 ? UNP P9WKD9 ? ? 'expression tag' -13 9 1 8VF5 HIS A 10 ? UNP P9WKD9 ? ? 'expression tag' -12 10 1 8VF5 HIS A 11 ? UNP P9WKD9 ? ? 'expression tag' -11 11 1 8VF5 HIS A 12 ? UNP P9WKD9 ? ? 'expression tag' -10 12 1 8VF5 SER A 13 ? UNP P9WKD9 ? ? 'expression tag' -9 13 1 8VF5 SER A 14 ? UNP P9WKD9 ? ? 'expression tag' -8 14 1 8VF5 GLY A 15 ? UNP P9WKD9 ? ? 'expression tag' -7 15 1 8VF5 HIS A 16 ? UNP P9WKD9 ? ? 'expression tag' -6 16 1 8VF5 ILE A 17 ? UNP P9WKD9 ? ? 'expression tag' -5 17 1 8VF5 GLU A 18 ? UNP P9WKD9 ? ? 'expression tag' -4 18 1 8VF5 GLY A 19 ? UNP P9WKD9 ? ? 'expression tag' -3 19 1 8VF5 ARG A 20 ? UNP P9WKD9 ? ? 'expression tag' -2 20 1 8VF5 HIS A 21 ? UNP P9WKD9 ? ? 'expression tag' -1 21 1 8VF5 MET A 22 ? UNP P9WKD9 ? ? 'expression tag' 0 22 2 8VF5 MET B 1 ? UNP P9WKD9 ? ? 'initiating methionine' -21 23 2 8VF5 GLY B 2 ? UNP P9WKD9 ? ? 'expression tag' -20 24 2 8VF5 HIS B 3 ? UNP P9WKD9 ? ? 'expression tag' -19 25 2 8VF5 HIS B 4 ? UNP P9WKD9 ? ? 'expression tag' -18 26 2 8VF5 HIS B 5 ? UNP P9WKD9 ? ? 'expression tag' -17 27 2 8VF5 HIS B 6 ? UNP P9WKD9 ? ? 'expression tag' -16 28 2 8VF5 HIS B 7 ? UNP P9WKD9 ? ? 'expression tag' -15 29 2 8VF5 HIS B 8 ? UNP P9WKD9 ? ? 'expression tag' -14 30 2 8VF5 HIS B 9 ? UNP P9WKD9 ? ? 'expression tag' -13 31 2 8VF5 HIS B 10 ? UNP P9WKD9 ? ? 'expression tag' -12 32 2 8VF5 HIS B 11 ? UNP P9WKD9 ? ? 'expression tag' -11 33 2 8VF5 HIS B 12 ? UNP P9WKD9 ? ? 'expression tag' -10 34 2 8VF5 SER B 13 ? UNP P9WKD9 ? ? 'expression tag' -9 35 2 8VF5 SER B 14 ? UNP P9WKD9 ? ? 'expression tag' -8 36 2 8VF5 GLY B 15 ? UNP P9WKD9 ? ? 'expression tag' -7 37 2 8VF5 HIS B 16 ? UNP P9WKD9 ? ? 'expression tag' -6 38 2 8VF5 ILE B 17 ? UNP P9WKD9 ? ? 'expression tag' -5 39 2 8VF5 GLU B 18 ? UNP P9WKD9 ? ? 'expression tag' -4 40 2 8VF5 GLY B 19 ? UNP P9WKD9 ? ? 'expression tag' -3 41 2 8VF5 ARG B 20 ? UNP P9WKD9 ? ? 'expression tag' -2 42 2 8VF5 HIS B 21 ? UNP P9WKD9 ? ? 'expression tag' -1 43 2 8VF5 MET B 22 ? UNP P9WKD9 ? ? 'expression tag' 0 44 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 97 ? ALA A 102 ? THR A 75 ALA A 80 1 ? 6 HELX_P HELX_P2 AA2 SER A 103 ? LEU A 104 ? SER A 81 LEU A 82 5 ? 2 HELX_P HELX_P3 AA3 PRO A 105 ? SER A 109 ? PRO A 83 SER A 87 5 ? 5 HELX_P HELX_P4 AA4 SER A 141 ? ASP A 155 ? SER A 119 ASP A 133 1 ? 15 HELX_P HELX_P5 AA5 LYS A 210 ? MET A 224 ? LYS A 188 MET A 202 1 ? 15 HELX_P HELX_P6 AA6 ASN A 229 ? TYR A 233 ? ASN A 207 TYR A 211 5 ? 5 HELX_P HELX_P7 AA7 ASP A 235 ? LYS A 248 ? ASP A 213 LYS A 226 1 ? 14 HELX_P HELX_P8 AA8 THR B 97 ? LEU B 104 ? THR B 75 LEU B 82 1 ? 8 HELX_P HELX_P9 AA9 PRO B 105 ? SER B 109 ? PRO B 83 SER B 87 5 ? 5 HELX_P HELX_P10 AB1 PRO B 119 ? VAL B 123 ? PRO B 97 VAL B 101 5 ? 5 HELX_P HELX_P11 AB2 ASP B 137 ? LYS B 139 ? ASP B 115 LYS B 117 5 ? 3 HELX_P HELX_P12 AB3 SER B 140 ? ASP B 155 ? SER B 118 ASP B 133 1 ? 16 HELX_P HELX_P13 AB4 PHE B 200 ? GLN B 205 ? PHE B 178 GLN B 183 1 ? 6 HELX_P HELX_P14 AB5 LYS B 210 ? SER B 223 ? LYS B 188 SER B 201 1 ? 14 HELX_P HELX_P15 AB6 ASP B 235 ? LEU B 249 ? ASP B 213 LEU B 227 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 70 SG ? ? ? 1_555 A CYS 73 SG ? ? A CYS 48 A CYS 51 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? B CYS 70 SG ? ? ? 1_555 B CYS 73 SG ? ? B CYS 48 B CYS 51 1_555 ? ? ? ? ? ? ? 2.032 ? ? hydrog1 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 38 N1 ? ? G DC 3 H DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 38 O6 ? ? G DC 3 H DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 38 N2 ? ? G DC 3 H DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 37 N1 ? ? G DC 4 H DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 37 O6 ? ? G DC 4 H DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 37 N2 ? ? G DC 4 H DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 36 N1 ? ? G DC 5 H DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 36 O6 ? ? G DC 5 H DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 36 N2 ? ? G DC 5 H DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 35 N1 ? ? G DC 6 H DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 35 O6 ? ? G DC 6 H DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 35 N2 ? ? G DC 6 H DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 34 N1 ? ? G DT 7 H DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 34 N6 ? ? G DT 7 H DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 33 N3 ? ? G DG 8 H DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 33 O2 ? ? G DG 8 H DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 33 N4 ? ? G DG 8 H DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 32 N1 ? ? G DT 9 H DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 32 N6 ? ? G DT 9 H DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 31 N1 ? ? G DC 10 H DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 31 O6 ? ? G DC 10 H DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 31 N2 ? ? G DC 10 H DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DG 29 O6 ? ? G DG 11 H DG 22 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog24 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DG 29 N1 ? ? G DG 11 H DG 22 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog25 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 30 N3 ? ? G DG 11 H DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 30 O2 ? ? G DG 11 H DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 30 N4 ? ? G DG 11 H DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 29 N1 ? ? G DC 12 H DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 29 O6 ? ? G DC 12 H DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 29 N2 ? ? G DC 12 H DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 28 N1 ? ? G DC 13 H DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 28 O6 ? ? G DC 13 H DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 28 N2 ? ? G DC 13 H DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DG 26 O6 ? ? G DG 14 H DG 19 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog35 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DG 26 N1 ? ? G DG 14 H DG 19 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog36 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 27 N3 ? ? G DG 14 H DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 27 O2 ? ? G DG 14 H DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 27 N4 ? ? G DG 14 H DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 26 N1 ? ? G DC 15 H DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 26 O6 ? ? G DC 15 H DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 26 N2 ? ? G DC 15 H DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 25 N1 ? ? G DC 16 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 25 O6 ? ? G DC 16 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 25 N2 ? ? G DC 16 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 17 N1 ? ? ? 1_555 D DC 24 N3 ? ? G DG 17 H DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 17 N2 ? ? ? 1_555 D DC 24 O2 ? ? G DG 17 H DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 17 O6 ? ? ? 1_555 D DC 24 N4 ? ? G DG 17 H DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DA 18 N1 ? ? ? 1_555 D DT 23 N3 ? ? G DA 18 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DA 18 N6 ? ? ? 1_555 D DT 23 O4 ? ? G DA 18 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DC 19 N3 ? ? ? 1_555 D DG 22 N1 ? ? G DC 19 H DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DC 19 N4 ? ? ? 1_555 D DG 22 O6 ? ? G DC 19 H DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DC 19 O2 ? ? ? 1_555 D DG 22 N2 ? ? G DC 19 H DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DG 20 N1 ? ? ? 1_555 D DC 21 N3 ? ? G DG 20 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 20 N2 ? ? ? 1_555 D DC 21 O2 ? ? G DG 20 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DG 20 O6 ? ? ? 1_555 D DC 21 N4 ? ? G DG 20 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DT 21 N3 ? ? ? 1_555 D DA 20 N1 ? ? G DT 21 H DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DT 21 O4 ? ? ? 1_555 D DA 20 N6 ? ? G DT 21 H DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 70 ? CYS A 73 ? CYS A 48 ? 1_555 CYS A 51 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 70 ? CYS B 73 ? CYS B 48 ? 1_555 CYS B 51 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 6 ? AA3 ? 3 ? AA4 ? 5 ? AA5 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 36 ? PRO A 39 ? VAL A 14 PRO A 17 AA1 2 SER A 30 ? PHE A 33 ? SER A 8 PHE A 11 AA1 3 GLU A 111 ? ILE A 112 ? GLU A 89 ILE A 90 AA2 1 TYR A 43 ? SER A 44 ? TYR A 21 SER A 22 AA2 2 SER A 131 ? PHE A 133 ? SER A 109 PHE A 111 AA2 3 MET A 184 ? THR A 188 ? MET A 162 THR A 166 AA2 4 ALA A 171 ? VAL A 175 ? ALA A 149 VAL A 153 AA2 5 ARG A 156 ? VAL A 160 ? ARG A 134 VAL A 138 AA2 6 VAL A 114 ? PRO A 119 ? VAL A 92 PRO A 97 AA3 1 HIS A 54 ? HIS A 57 ? HIS A 32 HIS A 35 AA3 2 LEU B 82 ? TYR B 86 ? LEU B 60 TYR B 64 AA3 3 VAL B 94 ? ALA B 95 ? VAL B 72 ALA B 73 AA4 1 ILE A 64 ? CYS A 70 ? ILE A 42 CYS A 48 AA4 2 GLY B 62 ? CYS B 70 ? GLY B 40 CYS B 48 AA4 3 HIS B 54 ? HIS B 57 ? HIS B 32 HIS B 35 AA4 4 ALA A 83 ? GLU A 87 ? ALA A 61 GLU A 65 AA4 5 MET A 93 ? ALA A 95 ? MET A 71 ALA A 73 AA5 1 GLY B 29 ? ILE B 31 ? GLY B 7 ILE B 9 AA5 2 VAL B 38 ? SER B 44 ? VAL B 16 SER B 22 AA5 3 PHE B 128 ? GLU B 135 ? PHE B 106 GLU B 113 AA5 4 GLU B 182 ? LEU B 189 ? GLU B 160 LEU B 167 AA5 5 ALA B 171 ? ASP B 177 ? ALA B 149 ASP B 155 AA5 6 MET B 157 ? VAL B 160 ? MET B 135 VAL B 138 AA5 7 GLU B 116 ? VAL B 118 ? GLU B 94 VAL B 96 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 38 ? O VAL A 16 N ILE A 31 ? N ILE A 9 AA1 2 3 N ALA A 32 ? N ALA A 10 O ILE A 112 ? O ILE A 90 AA2 1 2 N TYR A 43 ? N TYR A 21 O PHE A 133 ? O PHE A 111 AA2 2 3 N TYR A 132 ? N TYR A 110 O VAL A 186 ? O VAL A 164 AA2 3 4 O MET A 185 ? O MET A 163 N ARG A 174 ? N ARG A 152 AA2 4 5 O LEU A 173 ? O LEU A 151 N ALA A 158 ? N ALA A 136 AA2 5 6 O MET A 157 ? O MET A 135 N VAL A 118 ? N VAL A 96 AA3 1 2 N HIS A 54 ? N HIS A 32 O ALA B 85 ? O ALA B 63 AA3 2 3 N TYR B 86 ? N TYR B 64 O VAL B 94 ? O VAL B 72 AA4 1 2 N ARG A 65 ? N ARG A 43 O VAL B 69 ? O VAL B 47 AA4 2 3 O GLY B 62 ? O GLY B 40 N HIS B 57 ? N HIS B 35 AA4 3 4 O HIS B 54 ? O HIS B 32 N ALA A 85 ? N ALA A 63 AA4 4 5 N TYR A 86 ? N TYR A 64 O VAL A 94 ? O VAL A 72 AA5 1 2 N ILE B 31 ? N ILE B 9 O VAL B 38 ? O VAL B 16 AA5 2 3 N LYS B 41 ? N LYS B 19 O GLU B 135 ? O GLU B 113 AA5 3 4 N ARG B 130 ? N ARG B 108 O THR B 188 ? O THR B 166 AA5 4 5 O HIS B 187 ? O HIS B 165 N ALA B 172 ? N ALA B 150 AA5 5 6 O LEU B 173 ? O LEU B 151 N ALA B 158 ? N ALA B 136 AA5 6 7 O MET B 157 ? O MET B 135 N VAL B 118 ? N VAL B 96 # _pdbx_entry_details.entry_id 8VF5 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C A ASP 28 ? ? H A ILE 29 ? ? 1.01 2 1 C A VAL 55 ? ? H A ASP 56 ? ? 1.05 3 1 O A VAL 34 ? ? H B ALA 61 ? ? 1.55 4 1 OG1 B THR 75 ? ? OD2 B ASP 77 ? ? 1.91 5 1 OD1 B ASP 28 ? ? NE2 B GLN 216 ? ? 2.16 6 1 O A VAL 34 ? ? N B ALA 61 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" G DG 14 ? ? "C1'" G DG 14 ? ? N9 G DG 14 ? ? 110.76 108.30 2.46 0.30 N 2 1 "O4'" H DG 31 ? ? "C1'" H DG 31 ? ? N9 H DG 31 ? ? 110.95 108.30 2.65 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 10 ? ? -161.35 115.25 2 1 HIS A 27 ? ? -91.03 50.17 3 1 PRO A 103 ? ? -63.76 0.11 4 1 ASP A 204 ? ? -160.32 -168.67 5 1 VAL B 14 ? ? -102.31 -61.32 6 1 SER B 118 ? ? -96.59 32.12 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8VF5 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code AF-P9WKD9-F1 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8VF5 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ;Mean resolution of the map was 3.25 A, generated using ResMap Respective histogram and 2D slices can be provided on request. ; _em_3d_reconstruction.resolution 3.7 _em_3d_reconstruction.resolution_method OTHER _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 635411 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '50mM HEPES, 150mM NaCl, 2mM TCEP' _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Ku homodimer from M.tubeculosis in complex with linear DNA' _em_entity_assembly.details ;Protein: Ku homodimer was recombination purified DNA: Chemically Synthesized ; _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 8VF5 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type C-flat-1.2/1.3 _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8VF5 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8VF5 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8VF5 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A GLY -20 ? A GLY 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A HIS -11 ? A HIS 11 12 1 Y 1 A HIS -10 ? A HIS 12 13 1 Y 1 A SER -9 ? A SER 13 14 1 Y 1 A SER -8 ? A SER 14 15 1 Y 1 A GLY -7 ? A GLY 15 16 1 Y 1 A HIS -6 ? A HIS 16 17 1 Y 1 A ILE -5 ? A ILE 17 18 1 Y 1 A GLU -4 ? A GLU 18 19 1 Y 1 A GLY -3 ? A GLY 19 20 1 Y 1 A ARG -2 ? A ARG 20 21 1 Y 1 A HIS -1 ? A HIS 21 22 1 Y 1 A MET 0 ? A MET 22 23 1 Y 1 A LEU 227 ? A LEU 249 24 1 Y 1 A GLU 228 ? A GLU 250 25 1 Y 1 A GLY 229 ? A GLY 251 26 1 Y 1 A GLY 230 ? A GLY 252 27 1 Y 1 A GLN 231 ? A GLN 253 28 1 Y 1 A ALA 232 ? A ALA 254 29 1 Y 1 A PHE 233 ? A PHE 255 30 1 Y 1 A THR 234 ? A THR 256 31 1 Y 1 A ALA 235 ? A ALA 257 32 1 Y 1 A GLU 236 ? A GLU 258 33 1 Y 1 A ASP 237 ? A ASP 259 34 1 Y 1 A GLN 238 ? A GLN 260 35 1 Y 1 A PRO 239 ? A PRO 261 36 1 Y 1 A ARG 240 ? A ARG 262 37 1 Y 1 A LEU 241 ? A LEU 263 38 1 Y 1 A LEU 242 ? A LEU 264 39 1 Y 1 A ASP 243 ? A ASP 265 40 1 Y 1 A GLU 244 ? A GLU 266 41 1 Y 1 A PRO 245 ? A PRO 267 42 1 Y 1 A GLU 246 ? A GLU 268 43 1 Y 1 A ASP 247 ? A ASP 269 44 1 Y 1 A VAL 248 ? A VAL 270 45 1 Y 1 A SER 249 ? A SER 271 46 1 Y 1 A ASP 250 ? A ASP 272 47 1 Y 1 A LEU 251 ? A LEU 273 48 1 Y 1 A LEU 252 ? A LEU 274 49 1 Y 1 A ALA 253 ? A ALA 275 50 1 Y 1 A LYS 254 ? A LYS 276 51 1 Y 1 A LEU 255 ? A LEU 277 52 1 Y 1 A GLU 256 ? A GLU 278 53 1 Y 1 A ALA 257 ? A ALA 279 54 1 Y 1 A SER 258 ? A SER 280 55 1 Y 1 A VAL 259 ? A VAL 281 56 1 Y 1 A LYS 260 ? A LYS 282 57 1 Y 1 A ALA 261 ? A ALA 283 58 1 Y 1 A ARG 262 ? A ARG 284 59 1 Y 1 A SER 263 ? A SER 285 60 1 Y 1 A LYS 264 ? A LYS 286 61 1 Y 1 A ALA 265 ? A ALA 287 62 1 Y 1 A ASN 266 ? A ASN 288 63 1 Y 1 A SER 267 ? A SER 289 64 1 Y 1 A ASN 268 ? A ASN 290 65 1 Y 1 A VAL 269 ? A VAL 291 66 1 Y 1 A PRO 270 ? A PRO 292 67 1 Y 1 A THR 271 ? A THR 293 68 1 Y 1 A PRO 272 ? A PRO 294 69 1 Y 1 A PRO 273 ? A PRO 295 70 1 Y 1 B MET -21 ? B MET 1 71 1 Y 1 B GLY -20 ? B GLY 2 72 1 Y 1 B HIS -19 ? B HIS 3 73 1 Y 1 B HIS -18 ? B HIS 4 74 1 Y 1 B HIS -17 ? B HIS 5 75 1 Y 1 B HIS -16 ? B HIS 6 76 1 Y 1 B HIS -15 ? B HIS 7 77 1 Y 1 B HIS -14 ? B HIS 8 78 1 Y 1 B HIS -13 ? B HIS 9 79 1 Y 1 B HIS -12 ? B HIS 10 80 1 Y 1 B HIS -11 ? B HIS 11 81 1 Y 1 B HIS -10 ? B HIS 12 82 1 Y 1 B SER -9 ? B SER 13 83 1 Y 1 B SER -8 ? B SER 14 84 1 Y 1 B GLY -7 ? B GLY 15 85 1 Y 1 B HIS -6 ? B HIS 16 86 1 Y 1 B ILE -5 ? B ILE 17 87 1 Y 1 B GLU -4 ? B GLU 18 88 1 Y 1 B GLY -3 ? B GLY 19 89 1 Y 1 B ARG -2 ? B ARG 20 90 1 Y 1 B HIS -1 ? B HIS 21 91 1 Y 1 B MET 0 ? B MET 22 92 1 Y 1 B GLU 228 ? B GLU 250 93 1 Y 1 B GLY 229 ? B GLY 251 94 1 Y 1 B GLY 230 ? B GLY 252 95 1 Y 1 B GLN 231 ? B GLN 253 96 1 Y 1 B ALA 232 ? B ALA 254 97 1 Y 1 B PHE 233 ? B PHE 255 98 1 Y 1 B THR 234 ? B THR 256 99 1 Y 1 B ALA 235 ? B ALA 257 100 1 Y 1 B GLU 236 ? B GLU 258 101 1 Y 1 B ASP 237 ? B ASP 259 102 1 Y 1 B GLN 238 ? B GLN 260 103 1 Y 1 B PRO 239 ? B PRO 261 104 1 Y 1 B ARG 240 ? B ARG 262 105 1 Y 1 B LEU 241 ? B LEU 263 106 1 Y 1 B LEU 242 ? B LEU 264 107 1 Y 1 B ASP 243 ? B ASP 265 108 1 Y 1 B GLU 244 ? B GLU 266 109 1 Y 1 B PRO 245 ? B PRO 267 110 1 Y 1 B GLU 246 ? B GLU 268 111 1 Y 1 B ASP 247 ? B ASP 269 112 1 Y 1 B VAL 248 ? B VAL 270 113 1 Y 1 B SER 249 ? B SER 271 114 1 Y 1 B ASP 250 ? B ASP 272 115 1 Y 1 B LEU 251 ? B LEU 273 116 1 Y 1 B LEU 252 ? B LEU 274 117 1 Y 1 B ALA 253 ? B ALA 275 118 1 Y 1 B LYS 254 ? B LYS 276 119 1 Y 1 B LEU 255 ? B LEU 277 120 1 Y 1 B GLU 256 ? B GLU 278 121 1 Y 1 B ALA 257 ? B ALA 279 122 1 Y 1 B SER 258 ? B SER 280 123 1 Y 1 B VAL 259 ? B VAL 281 124 1 Y 1 B LYS 260 ? B LYS 282 125 1 Y 1 B ALA 261 ? B ALA 283 126 1 Y 1 B ARG 262 ? B ARG 284 127 1 Y 1 B SER 263 ? B SER 285 128 1 Y 1 B LYS 264 ? B LYS 286 129 1 Y 1 B ALA 265 ? B ALA 287 130 1 Y 1 B ASN 266 ? B ASN 288 131 1 Y 1 B SER 267 ? B SER 289 132 1 Y 1 B ASN 268 ? B ASN 290 133 1 Y 1 B VAL 269 ? B VAL 291 134 1 Y 1 B PRO 270 ? B PRO 292 135 1 Y 1 B THR 271 ? B THR 293 136 1 Y 1 B PRO 272 ? B PRO 294 137 1 Y 1 B PRO 273 ? B PRO 295 138 1 Y 1 G DC 22 ? C DC 22 139 1 Y 1 G DT 23 ? C DT 23 140 1 Y 1 G DG 24 ? C DG 24 141 1 Y 1 G DT 25 ? C DT 25 142 1 Y 1 G DG 26 ? C DG 26 143 1 Y 1 G DA 27 ? C DA 27 144 1 Y 1 G DT 28 ? C DT 28 145 1 Y 1 G DA 29 ? C DA 29 146 1 Y 1 G DT 30 ? C DT 30 147 1 Y 1 G DG 31 ? C DG 31 148 1 Y 1 G DG 32 ? C DG 32 149 1 Y 1 G DC 33 ? C DC 33 150 1 Y 1 G DG 34 ? C DG 34 151 1 Y 1 G DT 35 ? C DT 35 152 1 Y 1 G DT 36 ? C DT 36 153 1 Y 1 G DG 37 ? C DG 37 154 1 Y 1 G DT 38 ? C DT 38 155 1 Y 1 G DT 39 ? C DT 39 156 1 Y 1 G DG 40 ? C DG 40 157 1 Y 1 H DC -6 ? D DC 1 158 1 Y 1 H DA -5 ? D DA 2 159 1 Y 1 H DA -4 ? D DA 3 160 1 Y 1 H DC -3 ? D DC 4 161 1 Y 1 H DA -2 ? D DA 5 162 1 Y 1 H DA -1 ? D DA 6 163 1 Y 1 H DC 0 ? D DC 7 164 1 Y 1 H DG 1 ? D DG 8 165 1 Y 1 H DC 2 ? D DC 9 166 1 Y 1 H DC 3 ? D DC 10 167 1 Y 1 H DA 4 ? D DA 11 168 1 Y 1 H DT 5 ? D DT 12 169 1 Y 1 H DA 6 ? D DA 13 170 1 Y 1 H DT 7 ? D DT 14 171 1 Y 1 H DC 8 ? D DC 15 172 1 Y 1 H DA 9 ? D DA 16 173 1 Y 1 H DC 10 ? D DC 17 174 1 Y 1 H DA 11 ? D DA 18 175 1 Y 1 H DG 12 ? D DG 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # _em_admin.current_status REL _em_admin.deposition_date 2023-12-21 _em_admin.deposition_site RCSB _em_admin.entry_id 8VF5 _em_admin.last_update 2025-12-10 _em_admin.map_release_date 2025-12-10 _em_admin.title 'CryoEM structure of Ku homodimer in complex with linear DNA' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 50 mM ? 1 'HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid)' 1 150 mM ? 2 'Sodium chloride' 1 2 mM ? 3 'Tris(2-carboxyethyl)phosphine hydrochloride' # _em_ctf_correction.details 'Peformed in CryoSPARC Patch CTF' _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 83332 _em_entity_assembly_naturalsource.organism 'Mycobacterium tuberculosis H37Rv' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 4681 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 5967886 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' 'Rigid body fit' 7 ? 1 ? 'UCSF ChimeraX' ? 'MODEL FITTING' 'Rigid body fit' 8 ? 1 ? PHENIX ? OTHER ? 9 ? ? ? ? ? 'MODEL REFINEMENT' ? 10 ? 1 ? PHENIX ? 'MODEL REFINEMENT' ? 11 ? 1 ? Coot ? 'INITIAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 13 1 ? ? cryoSPARC ? CLASSIFICATION ? 14 1 ? ? cryoSPARC ? RECONSTRUCTION ? 15 1 ? ? cryoSPARC ? 'VOLUME SELECTION' ? 16 1 1 1 ? ? 'SERIES ALIGNMENT' ? 17 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 18 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 19 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 20 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 21 1 1 1 ? ? # _em_specimen.concentration 0.35 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8VF5 'double helix' 8VF5 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 3 1_555 D DG 38 1_555 0.224 -0.260 -0.737 -8.160 -7.523 3.082 1 G_DC3:DG31_H G 3 ? H 31 ? 19 1 1 C DC 4 1_555 D DG 37 1_555 0.191 -0.412 -1.204 -7.287 -6.621 4.216 2 G_DC4:DG30_H G 4 ? H 30 ? 19 1 1 C DC 5 1_555 D DG 36 1_555 0.180 -0.347 -1.104 -3.201 -2.402 2.375 3 G_DC5:DG29_H G 5 ? H 29 ? 19 1 1 C DC 6 1_555 D DG 35 1_555 0.131 -0.231 -0.731 -6.213 -0.677 -0.518 4 G_DC6:DG28_H G 6 ? H 28 ? 19 1 1 C DT 7 1_555 D DA 34 1_555 -0.064 -0.143 -0.044 -4.394 1.069 -0.201 5 G_DT7:DA27_H G 7 ? H 27 ? 20 1 1 C DG 8 1_555 D DC 33 1_555 -0.151 -0.161 0.489 0.335 1.591 -1.503 6 G_DG8:DC26_H G 8 ? H 26 ? 19 1 1 C DT 9 1_555 D DA 32 1_555 -0.152 -0.237 0.801 3.466 1.047 0.811 7 G_DT9:DA25_H G 9 ? H 25 ? 20 1 1 C DC 10 1_555 D DG 31 1_555 0.129 -0.269 0.828 3.178 -5.453 -2.343 8 G_DC10:DG24_H G 10 ? H 24 ? 19 1 1 C DG 11 1_555 D DC 30 1_555 -0.221 -0.285 1.001 3.879 3.221 2.912 9 G_DG11:DC23_H G 11 ? H 23 ? 19 1 1 C DC 12 1_555 D DG 29 1_555 0.194 -0.281 0.832 8.531 -0.897 0.593 10 G_DC12:DG22_H G 12 ? H 22 ? 19 1 1 C DC 13 1_555 D DG 28 1_555 0.193 -0.282 0.903 2.276 4.787 3.752 11 G_DC13:DG21_H G 13 ? H 21 ? 19 1 1 C DG 14 1_555 D DC 27 1_555 -0.149 -0.289 1.053 5.901 -0.517 0.574 12 G_DG14:DC20_H G 14 ? H 20 ? 19 1 1 C DC 15 1_555 D DG 26 1_555 0.136 -0.289 0.915 1.021 -6.441 -1.178 13 G_DC15:DG19_H G 15 ? H 19 ? 19 1 1 C DC 16 1_555 D DG 25 1_555 0.085 -0.313 0.996 -2.631 -8.351 -4.526 14 G_DC16:DG18_H G 16 ? H 18 ? 19 1 1 C DG 17 1_555 D DC 24 1_555 -0.150 -0.342 1.104 1.914 -1.869 -0.881 15 G_DG17:DC17_H G 17 ? H 17 ? 19 1 1 C DA 18 1_555 D DT 23 1_555 0.131 -0.247 0.777 0.196 -3.184 -0.462 16 G_DA18:DT16_H G 18 ? H 16 ? 20 1 1 C DC 19 1_555 D DG 22 1_555 0.169 -0.155 0.361 -0.560 -4.772 -0.599 17 G_DC19:DG15_H G 19 ? H 15 ? 19 1 1 C DG 20 1_555 D DC 21 1_555 -0.167 -0.223 0.966 12.822 0.753 0.505 18 G_DG20:DC14_H G 20 ? H 14 ? 19 1 1 C DT 21 1_555 D DA 20 1_555 -0.028 -0.196 0.257 14.856 -7.423 1.770 19 G_DT21:DA13_H G 21 ? H 13 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 3 1_555 D DG 38 1_555 C DC 4 1_555 D DG 37 1_555 -1.307 1.051 3.801 -7.399 -3.969 34.494 2.415 0.859 3.850 -6.573 12.254 35.471 1 GG_DC3DC4:DG30DG31_HH G 3 ? H 31 ? G 4 ? H 30 ? 1 C DC 4 1_555 D DG 37 1_555 C DC 5 1_555 D DG 36 1_555 0.145 1.033 3.553 0.182 -0.786 37.851 1.702 -0.199 3.532 -1.212 -0.280 37.859 2 GG_DC4DC5:DG29DG30_HH G 4 ? H 30 ? G 5 ? H 29 ? 1 C DC 5 1_555 D DG 36 1_555 C DC 6 1_555 D DG 35 1_555 -0.771 0.733 3.548 -6.834 0.382 36.106 1.105 0.190 3.636 0.610 10.905 36.727 3 GG_DC5DC6:DG28DG29_HH G 5 ? H 29 ? G 6 ? H 28 ? 1 C DC 6 1_555 D DG 35 1_555 C DT 7 1_555 D DA 34 1_555 0.325 -0.240 3.353 -1.317 4.041 31.561 -1.190 -0.836 3.282 7.388 2.408 31.838 4 GG_DC6DT7:DA27DG28_HH G 6 ? H 28 ? G 7 ? H 27 ? 1 C DT 7 1_555 D DA 34 1_555 C DG 8 1_555 D DC 33 1_555 0.457 -0.217 3.007 -1.625 5.312 34.995 -1.068 -0.969 2.920 8.765 2.681 35.420 5 GG_DT7DG8:DC26DA27_HH G 7 ? H 27 ? G 8 ? H 26 ? 1 C DG 8 1_555 D DC 33 1_555 C DT 9 1_555 D DA 32 1_555 0.187 -0.887 3.228 -0.149 0.920 34.970 -1.612 -0.333 3.203 1.530 0.249 34.982 6 GG_DG8DT9:DA25DC26_HH G 8 ? H 26 ? G 9 ? H 25 ? 1 C DT 9 1_555 D DA 32 1_555 C DC 10 1_555 D DG 31 1_555 -0.147 -0.618 3.161 0.812 0.685 32.395 -1.222 0.402 3.143 1.227 -1.455 32.412 7 GG_DT9DC10:DG24DA25_HH G 9 ? H 25 ? G 10 ? H 24 ? 1 C DC 10 1_555 D DG 31 1_555 C DG 11 1_555 D DC 30 1_555 1.075 0.413 3.392 3.751 -6.039 34.224 1.641 -1.198 3.368 -10.126 -6.291 34.933 8 GG_DC10DG11:DC23DG24_HH G 10 ? H 24 ? G 11 ? H 23 ? 1 C DG 11 1_555 D DC 30 1_555 C DC 12 1_555 D DG 29 1_555 0.072 -0.825 3.116 1.114 2.658 32.190 -1.925 0.057 3.041 4.782 -2.004 32.315 9 GG_DG11DC12:DG22DC23_HH G 11 ? H 23 ? G 12 ? H 22 ? 1 C DC 12 1_555 D DG 29 1_555 C DC 13 1_555 D DG 28 1_555 1.060 0.492 3.940 8.207 -7.657 39.514 1.725 -0.417 3.917 -11.058 -11.852 41.016 10 GG_DC12DC13:DG21DG22_HH G 12 ? H 22 ? G 13 ? H 21 ? 1 C DC 13 1_555 D DG 28 1_555 C DG 14 1_555 D DC 27 1_555 0.144 -0.411 3.146 0.467 3.689 31.475 -1.402 -0.181 3.081 6.770 -0.856 31.688 11 GG_DC13DG14:DC20DG21_HH G 13 ? H 21 ? G 14 ? H 20 ? 1 C DG 14 1_555 D DC 27 1_555 C DC 15 1_555 D DG 26 1_555 0.216 -0.569 3.453 -0.536 -2.628 38.981 -0.516 -0.391 3.480 -3.932 0.801 39.069 12 GG_DG14DC15:DG19DC20_HH G 14 ? H 20 ? G 15 ? H 19 ? 1 C DC 15 1_555 D DG 26 1_555 C DC 16 1_555 D DG 25 1_555 -0.869 -0.430 3.412 0.215 -2.418 34.127 -0.331 1.513 3.428 -4.114 -0.367 34.211 13 GG_DC15DC16:DG18DG19_HH G 15 ? H 19 ? G 16 ? H 18 ? 1 C DC 16 1_555 D DG 25 1_555 C DG 17 1_555 D DC 24 1_555 -0.198 -0.033 3.831 -5.187 -5.223 33.847 0.892 -0.609 3.782 -8.841 8.781 34.615 14 GG_DC16DG17:DC17DG18_HH G 16 ? H 18 ? G 17 ? H 17 ? 1 C DG 17 1_555 D DC 24 1_555 C DA 18 1_555 D DT 23 1_555 -0.347 -0.215 3.422 0.073 -0.948 33.528 -0.210 0.614 3.426 -1.644 -0.127 33.541 15 GG_DG17DA18:DT16DC17_HH G 17 ? H 17 ? G 18 ? H 16 ? 1 C DA 18 1_555 D DT 23 1_555 C DC 19 1_555 D DG 22 1_555 -0.263 -0.774 3.472 -1.351 -0.975 38.957 -1.034 0.219 3.497 -1.462 2.025 38.992 16 GG_DA18DC19:DG15DT16_HH G 18 ? H 16 ? G 19 ? H 15 ? 1 C DC 19 1_555 D DG 22 1_555 C DG 20 1_555 D DC 21 1_555 0.544 -0.646 2.796 -6.213 -5.872 32.065 -0.285 -1.850 2.718 -10.402 11.006 33.156 17 GG_DC19DG20:DC14DG15_HH G 19 ? H 15 ? G 20 ? H 14 ? 1 C DG 20 1_555 D DC 21 1_555 C DT 21 1_555 D DA 20 1_555 -0.145 -0.888 3.259 5.367 -2.263 33.984 -1.146 1.080 3.249 -3.836 -9.100 34.465 18 GG_DG20DT21:DA13DC14_HH G 20 ? H 14 ? G 21 ? H 13 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Health and Medical Research Council (NHMRC, Australia)' Australia APP2000934 1 'Science and Engineering Research Board (SERB)' India CRG/2020/002622 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code AF-P9WKD9-F1 # _atom_sites.entry_id 8VF5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_ #