data_8VFD # _entry.id 8VFD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VFD pdb_00008vfd 10.2210/pdb8vfd/pdb WWPDB D_1000276386 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-08 2 'Structure model' 1 1 2024-06-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'Chirality error at C5 atom of residue T6' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VFD _pdbx_database_status.recvd_initial_deposition_date 2023-12-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email bfreudenthal@kumc.edu _pdbx_contact_author.name_first Bret _pdbx_contact_author.name_last Freudenthal _pdbx_contact_author.name_mi D _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1449-4710 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Oden, P.N.' 1 0009-0005-8506-2028 'Ryan, B.J.' 2 0000-0001-8262-8659 'Freudenthal, B.D.' 3 0000-0003-1449-4710 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 52 _citation.language ? _citation.page_first 5392 _citation.page_last 5405 _citation.title 'Biochemical and structural characterization of Fapy•dG replication by Human DNA polymerase beta.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkae277 _citation.pdbx_database_id_PubMed 38634780 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, S.' 1 ? primary 'Oden, P.N.' 2 ? primary 'Ryan, B.J.' 3 ? primary 'Yang, H.' 4 ? primary 'Freudenthal, B.D.' 5 ? primary 'Greenberg, M.M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38241.672 1 2.7.7.7,4.2.99.- ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*(FAP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4862.160 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3') ; 3085.029 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 non-polymer syn ;1-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione ; 480.195 1 ? ? ? ? 7 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 8 water nat water 18.015 104 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8NI)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACXTCGCATCAGC T ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)' GCTGATGCGA P ? 4 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'SODIUM ION' NA 6 ;1-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione ; A1ACD 7 'MANGANESE (II) ION' MN 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 ARG n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 8NI n 2 7 DT n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DG n 2 16 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DA n 4 1 DG n 4 2 DT n 4 3 DC n 4 4 DG n 4 5 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 335 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'synthetic construct' ? 32630 ? 3 1 sample 1 10 'synthetic construct' ? 32630 ? 4 1 sample 1 5 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8NI 'DNA linking' . 'N-[(5S)-2-amino-5-formamido-6-oxo-5,6-dihydropyrimidin-4-yl]-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosylamine' ? 'C10 H16 N5 O8 P' 365.237 A1ACD non-polymer . ;1-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]-beta-D-threo-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione ; ? 'C11 H19 N2 O13 P3' 480.195 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 ? ? ? A . n A 1 206 LYS 206 206 ? ? ? A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 ? ? ? A . n A 1 245 ASN 245 245 ? ? ? A . n A 1 246 ASP 246 246 ? ? ? A . n A 1 247 GLU 247 247 ? ? ? A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DC 2 2 2 DC DC T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DA 4 4 4 DA DA T . n B 2 5 DC 5 5 5 DC DC T . n B 2 6 8NI 6 6 6 8NI FAP T . n B 2 7 DT 7 7 7 DT DT T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DG 9 9 9 DG DG T . n B 2 10 DC 10 10 10 DC DC T . n B 2 11 DA 11 11 11 DA DA T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DC 13 13 13 DC DC T . n B 2 14 DA 14 14 14 DA DA T . n B 2 15 DG 15 15 15 DG DG T . n B 2 16 DC 16 16 16 DC DC T . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DA 10 10 10 DA DA P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n D 4 5 DG 5 5 5 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NA 1 401 401 NA NA A . F 6 A1ACD 1 402 404 A1ACD TPC A . G 7 MN 1 403 1 MN MN A . H 7 MN 1 404 2 MN MN A . I 8 HOH 1 501 72 HOH HOH A . I 8 HOH 2 502 3 HOH HOH A . I 8 HOH 3 503 54 HOH HOH A . I 8 HOH 4 504 47 HOH HOH A . I 8 HOH 5 505 24 HOH HOH A . I 8 HOH 6 506 120 HOH HOH A . I 8 HOH 7 507 123 HOH HOH A . I 8 HOH 8 508 39 HOH HOH A . I 8 HOH 9 509 4 HOH HOH A . I 8 HOH 10 510 69 HOH HOH A . I 8 HOH 11 511 12 HOH HOH A . I 8 HOH 12 512 88 HOH HOH A . I 8 HOH 13 513 41 HOH HOH A . I 8 HOH 14 514 44 HOH HOH A . I 8 HOH 15 515 5 HOH HOH A . I 8 HOH 16 516 59 HOH HOH A . I 8 HOH 17 517 6 HOH HOH A . I 8 HOH 18 518 2 HOH HOH A . I 8 HOH 19 519 75 HOH HOH A . I 8 HOH 20 520 94 HOH HOH A . I 8 HOH 21 521 79 HOH HOH A . I 8 HOH 22 522 16 HOH HOH A . I 8 HOH 23 523 19 HOH HOH A . I 8 HOH 24 524 66 HOH HOH A . I 8 HOH 25 525 32 HOH HOH A . I 8 HOH 26 526 10 HOH HOH A . I 8 HOH 27 527 17 HOH HOH A . I 8 HOH 28 528 45 HOH HOH A . I 8 HOH 29 529 109 HOH HOH A . I 8 HOH 30 530 25 HOH HOH A . I 8 HOH 31 531 26 HOH HOH A . I 8 HOH 32 532 40 HOH HOH A . I 8 HOH 33 533 77 HOH HOH A . I 8 HOH 34 534 34 HOH HOH A . I 8 HOH 35 535 119 HOH HOH A . I 8 HOH 36 536 7 HOH HOH A . I 8 HOH 37 537 61 HOH HOH A . I 8 HOH 38 538 117 HOH HOH A . I 8 HOH 39 539 8 HOH HOH A . I 8 HOH 40 540 67 HOH HOH A . I 8 HOH 41 541 65 HOH HOH A . I 8 HOH 42 542 110 HOH HOH A . I 8 HOH 43 543 57 HOH HOH A . I 8 HOH 44 544 87 HOH HOH A . I 8 HOH 45 545 105 HOH HOH A . I 8 HOH 46 546 35 HOH HOH A . I 8 HOH 47 547 38 HOH HOH A . I 8 HOH 48 548 23 HOH HOH A . I 8 HOH 49 549 27 HOH HOH A . I 8 HOH 50 550 13 HOH HOH A . I 8 HOH 51 551 80 HOH HOH A . I 8 HOH 52 552 113 HOH HOH A . I 8 HOH 53 553 68 HOH HOH A . I 8 HOH 54 554 76 HOH HOH A . I 8 HOH 55 555 15 HOH HOH A . I 8 HOH 56 556 14 HOH HOH A . I 8 HOH 57 557 81 HOH HOH A . I 8 HOH 58 558 58 HOH HOH A . I 8 HOH 59 559 73 HOH HOH A . I 8 HOH 60 560 30 HOH HOH A . I 8 HOH 61 561 52 HOH HOH A . I 8 HOH 62 562 83 HOH HOH A . I 8 HOH 63 563 48 HOH HOH A . I 8 HOH 64 564 63 HOH HOH A . I 8 HOH 65 565 36 HOH HOH A . I 8 HOH 66 566 98 HOH HOH A . I 8 HOH 67 567 49 HOH HOH A . I 8 HOH 68 568 121 HOH HOH A . I 8 HOH 69 569 101 HOH HOH A . I 8 HOH 70 570 97 HOH HOH A . I 8 HOH 71 571 1 HOH HOH A . I 8 HOH 72 572 55 HOH HOH A . I 8 HOH 73 573 118 HOH HOH A . I 8 HOH 74 574 60 HOH HOH A . I 8 HOH 75 575 46 HOH HOH A . I 8 HOH 76 576 64 HOH HOH A . I 8 HOH 77 577 99 HOH HOH A . I 8 HOH 78 578 53 HOH HOH A . I 8 HOH 79 579 103 HOH HOH A . I 8 HOH 80 580 9 HOH HOH A . I 8 HOH 81 581 43 HOH HOH A . J 8 HOH 1 101 18 HOH HOH T . J 8 HOH 2 102 89 HOH HOH T . J 8 HOH 3 103 108 HOH HOH T . J 8 HOH 4 104 78 HOH HOH T . J 8 HOH 5 105 70 HOH HOH T . J 8 HOH 6 106 92 HOH HOH T . J 8 HOH 7 107 111 HOH HOH T . J 8 HOH 8 108 42 HOH HOH T . J 8 HOH 9 109 29 HOH HOH T . J 8 HOH 10 110 51 HOH HOH T . J 8 HOH 11 111 22 HOH HOH T . J 8 HOH 12 112 50 HOH HOH T . J 8 HOH 13 113 20 HOH HOH T . J 8 HOH 14 114 31 HOH HOH T . J 8 HOH 15 115 71 HOH HOH T . J 8 HOH 16 116 33 HOH HOH T . K 8 HOH 1 101 28 HOH HOH P . K 8 HOH 2 102 122 HOH HOH P . K 8 HOH 3 103 114 HOH HOH P . K 8 HOH 4 104 86 HOH HOH P . K 8 HOH 5 105 37 HOH HOH P . K 8 HOH 6 106 11 HOH HOH P . L 8 HOH 1 101 62 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 8 ? CG ? A GLN 8 CG 2 1 Y 1 A GLN 8 ? CD ? A GLN 8 CD 3 1 Y 1 A GLN 8 ? OE1 ? A GLN 8 OE1 4 1 Y 1 A GLN 8 ? NE2 ? A GLN 8 NE2 5 1 Y 1 A LYS 35 ? CG ? A LYS 35 CG 6 1 Y 1 A LYS 35 ? CD ? A LYS 35 CD 7 1 Y 1 A LYS 35 ? CE ? A LYS 35 CE 8 1 Y 1 A LYS 35 ? NZ ? A LYS 35 NZ 9 1 Y 1 A LYS 52 ? CG ? A LYS 52 CG 10 1 Y 1 A LYS 52 ? CD ? A LYS 52 CD 11 1 Y 1 A LYS 52 ? CE ? A LYS 52 CE 12 1 Y 1 A LYS 52 ? NZ ? A LYS 52 NZ 13 1 Y 1 A LYS 72 ? CG ? A LYS 72 CG 14 1 Y 1 A LYS 72 ? CD ? A LYS 72 CD 15 1 Y 1 A LYS 72 ? CE ? A LYS 72 CE 16 1 Y 1 A LYS 72 ? NZ ? A LYS 72 NZ 17 1 Y 1 A GLU 129 ? CG ? A GLU 129 CG 18 1 Y 1 A GLU 129 ? CD ? A GLU 129 CD 19 1 Y 1 A GLU 129 ? OE1 ? A GLU 129 OE1 20 1 Y 1 A GLU 129 ? OE2 ? A GLU 129 OE2 21 1 Y 1 A GLU 203 ? CG ? A GLU 203 CG 22 1 Y 1 A GLU 203 ? CD ? A GLU 203 CD 23 1 Y 1 A GLU 203 ? OE1 ? A GLU 203 OE1 24 1 Y 1 A GLU 203 ? OE2 ? A GLU 203 OE2 25 1 Y 1 A GLN 207 ? CG ? A GLN 207 CG 26 1 Y 1 A GLN 207 ? CD ? A GLN 207 CD 27 1 Y 1 A GLN 207 ? OE1 ? A GLN 207 OE1 28 1 Y 1 A GLN 207 ? NE2 ? A GLN 207 NE2 29 1 Y 1 A LYS 209 ? CG ? A LYS 209 CG 30 1 Y 1 A LYS 209 ? CD ? A LYS 209 CD 31 1 Y 1 A LYS 209 ? CE ? A LYS 209 CE 32 1 Y 1 A LYS 209 ? NZ ? A LYS 209 NZ 33 1 Y 1 A LYS 248 ? CG ? A LYS 248 CG 34 1 Y 1 A LYS 248 ? CD ? A LYS 248 CD 35 1 Y 1 A LYS 248 ? CE ? A LYS 248 CE 36 1 Y 1 A LYS 248 ? NZ ? A LYS 248 NZ 37 1 Y 1 A ILE 260 ? CG1 ? A ILE 260 CG1 38 1 Y 1 A ILE 260 ? CG2 ? A ILE 260 CG2 39 1 Y 1 A ILE 260 ? CD1 ? A ILE 260 CD1 40 1 Y 1 A LYS 280 ? CG ? A LYS 280 CG 41 1 Y 1 A LYS 280 ? CD ? A LYS 280 CD 42 1 Y 1 A LYS 280 ? CE ? A LYS 280 CE 43 1 Y 1 A LYS 280 ? NZ ? A LYS 280 NZ 44 1 Y 1 A ASP 314 ? CG ? A ASP 314 CG 45 1 Y 1 A ASP 314 ? OD1 ? A ASP 314 OD1 46 1 Y 1 A ASP 314 ? OD2 ? A ASP 314 OD2 47 1 Y 1 A LYS 326 ? CG ? A LYS 326 CG 48 1 Y 1 A LYS 326 ? CD ? A LYS 326 CD 49 1 Y 1 A LYS 326 ? CE ? A LYS 326 CE 50 1 Y 1 A LYS 326 ? NZ ? A LYS 326 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 107.910 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8VFD _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.770 _cell.length_a_esd ? _cell.length_b 79.070 _cell.length_b_esd ? _cell.length_c 54.366 _cell.length_c_esd ? _cell.volume 219941.178 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VFD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;14-22% PEG 3350 0.05 M Imidazole pH 8.0 0.35 M Sodium Acetate ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 R 200K-A' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-06-16 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 27.00 _reflns.entry_id 8VFD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 25.02 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32606 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.14 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1233 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.428 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 33.12 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8VFD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.10 _refine.ls_d_res_low 25.02 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32606 _refine.ls_number_reflns_R_free 2836 _refine.ls_number_reflns_R_work 29770 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 65.81 _refine.ls_percent_reflns_R_free 8.70 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2034 _refine.ls_R_factor_R_free 0.2422 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1997 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.0147 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2523 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 25.02 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 3308 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2539 _refine_hist.pdbx_number_atoms_nucleic_acid 633 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0088 ? 3324 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1097 ? 4619 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0591 ? 509 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0239 ? 486 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 22.9839 ? 1272 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.10 2.14 . . 38 464 20.23 . . . . 0.2568 . . . . . . . . . . . 0.2892 'X-RAY DIFFRACTION' 2.14 2.18 . . 64 616 27.24 . . . . 0.2528 . . . . . . . . . . . 0.2341 'X-RAY DIFFRACTION' 2.18 2.22 . . 75 773 34.75 . . . . 0.2794 . . . . . . . . . . . 0.3737 'X-RAY DIFFRACTION' 2.22 2.26 . . 90 973 42.12 . . . . 0.2788 . . . . . . . . . . . 0.3106 'X-RAY DIFFRACTION' 2.26 2.31 . . 95 1047 46.84 . . . . 0.2735 . . . . . . . . . . . 0.3018 'X-RAY DIFFRACTION' 2.31 2.37 . . 108 1124 49.48 . . . . 0.2769 . . . . . . . . . . . 0.3135 'X-RAY DIFFRACTION' 2.37 2.43 . . 102 1129 49.88 . . . . 0.2650 . . . . . . . . . . . 0.2871 'X-RAY DIFFRACTION' 2.43 2.49 . . 110 1147 50.95 . . . . 0.2625 . . . . . . . . . . . 0.3535 'X-RAY DIFFRACTION' 2.49 2.57 . . 111 1204 52.20 . . . . 0.2618 . . . . . . . . . . . 0.2969 'X-RAY DIFFRACTION' 2.57 2.65 . . 124 1222 54.89 . . . . 0.2450 . . . . . . . . . . . 0.2844 'X-RAY DIFFRACTION' 2.65 2.74 . . 126 1380 60.14 . . . . 0.2332 . . . . . . . . . . . 0.2729 'X-RAY DIFFRACTION' 2.74 2.85 . . 143 1490 67.28 . . . . 0.2293 . . . . . . . . . . . 0.2646 'X-RAY DIFFRACTION' 2.85 2.98 . . 176 1782 77.91 . . . . 0.2161 . . . . . . . . . . . 0.2983 'X-RAY DIFFRACTION' 2.98 3.14 . . 191 1967 87.90 . . . . 0.2185 . . . . . . . . . . . 0.2371 'X-RAY DIFFRACTION' 3.14 3.34 . . 210 2190 96.70 . . . . 0.1883 . . . . . . . . . . . 0.2593 'X-RAY DIFFRACTION' 3.34 3.59 . . 205 2263 99.80 . . . . 0.1742 . . . . . . . . . . . 0.2906 'X-RAY DIFFRACTION' 3.59 3.95 . . 212 2279 99.92 . . . . 0.1806 . . . . . . . . . . . 0.2115 'X-RAY DIFFRACTION' 3.95 4.52 . . 216 2268 100.00 . . . . 0.1688 . . . . . . . . . . . 0.1954 'X-RAY DIFFRACTION' 4.52 5.69 . . 224 2224 100.00 . . . . 0.1808 . . . . . . . . . . . 0.1868 'X-RAY DIFFRACTION' 5.69 25.02 . . 216 2228 98.31 . . . . 0.1852 . . . . . . . . . . . 0.2197 # _struct.entry_id 8VFD _struct.title 'Ternary DNA Polymerase Beta bound to DNA containing template FapydG incoming TTP analog' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VFD _struct_keywords.text 'FapydG, Polymerase Beta, primer terminus, Pol Beta, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPOLB_HUMAN P06746 ? 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 2 PDB 8VFD 8VFD ? 2 ? 1 3 PDB 8VFD 8VFD ? 3 ? 1 4 PDB 8VFD 8VFD ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VFD A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 8VFD T 1 ? 16 ? 8VFD 1 ? 16 ? 1 16 3 3 8VFD P 1 ? 10 ? 8VFD 1 ? 10 ? 1 10 4 4 8VFD D 1 ? 5 ? 8VFD 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5400 ? 1 MORE -65 ? 1 'SSA (A^2)' 20070 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA A 32 ? TYR A 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 AA3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 AA9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 AB1 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR A 142 ? GLU A 147 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 AB3 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 CYS A 178 ? ARG A 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 AB5 LEU A 210 ? VAL A 221 ? LEU A 210 VAL A 221 1 ? 12 HELX_P HELX_P15 AB6 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER A 275 ? LYS A 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 AB9 SER A 315 ? ILE A 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 AC1 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 5 "O3'" ? ? ? 1_555 B 8NI 6 P ? ? T DC 5 T 8NI 6 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale2 covale both ? B 8NI 6 "O3'" ? ? ? 1_555 B DT 7 P ? ? T 8NI 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.615 ? ? metalc1 metalc ? ? A THR 101 O ? ? ? 1_555 E NA . NA ? ? A THR 101 A NA 401 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc2 metalc ? ? A VAL 103 O ? ? ? 1_555 E NA . NA ? ? A VAL 103 A NA 401 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc3 metalc ? ? A ILE 106 O ? ? ? 1_555 E NA . NA ? ? A ILE 106 A NA 401 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc4 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 G MN . MN ? ? A ASP 190 A MN 403 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc5 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 H MN . MN ? ? A ASP 190 A MN 404 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc6 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 192 A MN 403 1_555 ? ? ? ? ? ? ? 2.137 ? ? metalc7 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 H MN . MN ? ? A ASP 192 A MN 404 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc8 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 H MN . MN ? ? A ASP 256 A MN 404 1_555 ? ? ? ? ? ? ? 2.553 ? ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 401 A HOH 571 1_555 ? ? ? ? ? ? ? 2.686 ? ? metalc10 metalc ? ? E NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 401 P DG 9 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc11 metalc ? ? E NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 401 P HOH 102 1_555 ? ? ? ? ? ? ? 2.655 ? ? metalc12 metalc ? ? F A1ACD . O13 ? ? ? 1_555 G MN . MN ? ? A A1ACD 402 A MN 403 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc13 metalc ? ? F A1ACD . O18 ? ? ? 1_555 G MN . MN ? ? A A1ACD 402 A MN 403 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc14 metalc ? ? F A1ACD . O22 ? ? ? 1_555 G MN . MN ? ? A A1ACD 402 A MN 403 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc15 metalc ? ? F A1ACD . O13 ? ? ? 1_555 H MN . MN ? ? A A1ACD 402 A MN 404 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc16 metalc ? ? G MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 403 A HOH 535 1_555 ? ? ? ? ? ? ? 2.315 ? ? metalc17 metalc ? ? H MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 404 A HOH 506 1_555 ? ? ? ? ? ? ? 2.631 ? ? metalc18 metalc ? ? H MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 404 P HOH 103 1_555 ? ? ? ? ? ? ? 2.515 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 D DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 D DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 10 N6 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 101 ? A THR 101 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 91.3 ? 2 O ? A THR 101 ? A THR 101 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 91.2 ? 3 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 90.7 ? 4 O ? A THR 101 ? A THR 101 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? I HOH . ? A HOH 571 ? 1_555 83.1 ? 5 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? I HOH . ? A HOH 571 ? 1_555 103.3 ? 6 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? I HOH . ? A HOH 571 ? 1_555 165.0 ? 7 O ? A THR 101 ? A THR 101 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 167.6 ? 8 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 99.3 ? 9 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 94.8 ? 10 O ? I HOH . ? A HOH 571 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 88.4 ? 11 O ? A THR 101 ? A THR 101 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? K HOH . ? P HOH 102 ? 1_555 83.2 ? 12 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? K HOH . ? P HOH 102 ? 1_555 174.5 ? 13 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? K HOH . ? P HOH 102 ? 1_555 90.2 ? 14 O ? I HOH . ? A HOH 571 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? K HOH . ? P HOH 102 ? 1_555 75.4 ? 15 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? E NA . ? A NA 401 ? 1_555 O ? K HOH . ? P HOH 102 ? 1_555 86.0 ? 16 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 97.6 ? 17 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 99.7 ? 18 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 87.3 ? 19 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O18 ? F A1ACD . ? A A1ACD 402 ? 1_555 166.7 ? 20 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O18 ? F A1ACD . ? A A1ACD 402 ? 1_555 88.7 ? 21 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O18 ? F A1ACD . ? A A1ACD 402 ? 1_555 92.2 ? 22 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O22 ? F A1ACD . ? A A1ACD 402 ? 1_555 91.7 ? 23 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O22 ? F A1ACD . ? A A1ACD 402 ? 1_555 170.7 ? 24 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O22 ? F A1ACD . ? A A1ACD 402 ? 1_555 92.3 ? 25 O18 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O22 ? F A1ACD . ? A A1ACD 402 ? 1_555 82.0 ? 26 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 535 ? 1_555 84.0 ? 27 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 535 ? 1_555 90.5 ? 28 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 535 ? 1_555 175.8 ? 29 O18 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 535 ? 1_555 84.2 ? 30 O22 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 535 ? 1_555 89.3 ? 31 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 95.4 ? 32 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 87.4 ? 33 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 94.3 ? 34 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 89.1 ? 35 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 89.4 ? 36 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 175.2 ? 37 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? I HOH . ? A HOH 506 ? 1_555 80.5 ? 38 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? I HOH . ? A HOH 506 ? 1_555 165.2 ? 39 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? I HOH . ? A HOH 506 ? 1_555 99.8 ? 40 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? I HOH . ? A HOH 506 ? 1_555 76.4 ? 41 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 175.1 ? 42 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 89.4 ? 43 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 91.8 ? 44 O13 ? F A1ACD . ? A A1ACD 402 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 91.4 ? 45 O ? I HOH . ? A HOH 506 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 94.9 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 AA1 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 AA2 1 ILE A 174 ? VAL A 177 ? ILE A 174 VAL A 177 AA2 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 AA2 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 AA2 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 AA2 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 AA3 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 AA3 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 AA2 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 AA2 2 3 N VAL A 193 ? N VAL A 193 O ASP A 256 ? O ASP A 256 AA2 3 4 O ILE A 257 ? O ILE A 257 N PHE A 235 ? N PHE A 235 AA2 4 5 O MET A 236 ? O MET A 236 N SER A 229 ? N SER A 229 AA3 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 T _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 2 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 T _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 T _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.13 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.83 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 8 ? ? -123.80 -67.74 2 1 THR A 10 ? ? 36.18 -121.72 3 1 GLU A 117 ? ? -93.66 31.20 4 1 CYS A 178 ? ? -106.92 -139.57 5 1 LYS A 209 ? ? 50.79 14.76 6 1 SER A 229 ? ? -170.10 141.50 7 1 ASN A 294 ? ? -117.53 -163.40 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C5 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id T _pdbx_validate_chiral.auth_comp_id 8NI _pdbx_validate_chiral.auth_seq_id 6 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 112 ? ? 0.081 'SIDE CHAIN' 2 1 ARG A 283 ? ? 0.270 'SIDE CHAIN' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # _pdbx_entry_details.entry_id 8VFD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A THR 205 ? A THR 205 8 1 Y 1 A LYS 206 ? A LYS 206 9 1 Y 1 A LYS 244 ? A LYS 244 10 1 Y 1 A ASN 245 ? A ASN 245 11 1 Y 1 A ASP 246 ? A ASP 246 12 1 Y 1 A GLU 247 ? A GLU 247 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8NI C5 C N S 1 8NI C4 C N N 2 8NI N2 N N N 3 8NI N7 N N N 4 8NI C8 C N N 5 8NI "C1'" C N R 6 8NI C2 C N N 7 8NI "C2'" C N N 8 8NI "C3'" C N S 9 8NI "C4'" C N R 10 8NI "C5'" C N N 11 8NI C6 C N N 12 8NI N1 N N N 13 8NI N3 N N N 14 8NI N9 N N N 15 8NI "O3'" O N N 16 8NI "O4'" O N N 17 8NI "O5'" O N N 18 8NI O6 O N N 19 8NI O8 O N N 20 8NI OP1 O N N 21 8NI OP2 O N N 22 8NI P P N N 23 8NI H1 H N N 24 8NI H2 H N N 25 8NI H3 H N N 26 8NI H4 H N N 27 8NI H5 H N N 28 8NI H6 H N N 29 8NI H7 H N N 30 8NI H8 H N N 31 8NI H9 H N N 32 8NI H10 H N N 33 8NI H11 H N N 34 8NI H12 H N N 35 8NI H13 H N N 36 8NI H14 H N N 37 8NI H16 H N N 38 8NI OP3 O N N 39 8NI H15 H N N 40 A1ACD C01 C N N 41 A1ACD C02 C N N 42 A1ACD C03 C N N 43 A1ACD C05 C N R 44 A1ACD C06 C N N 45 A1ACD C07 C N R 46 A1ACD C09 C N R 47 A1ACD C10 C N N 48 A1ACD C15 C N N 49 A1ACD C25 C N N 50 A1ACD C28 C N N 51 A1ACD N04 N N N 52 A1ACD N27 N N N 53 A1ACD O08 O N N 54 A1ACD O11 O N N 55 A1ACD O13 O N N 56 A1ACD O14 O N N 57 A1ACD O17 O N N 58 A1ACD O18 O N N 59 A1ACD O19 O N N 60 A1ACD O21 O N N 61 A1ACD O22 O N N 62 A1ACD O23 O N N 63 A1ACD O24 O N N 64 A1ACD O26 O N N 65 A1ACD O29 O N N 66 A1ACD P12 P N N 67 A1ACD P16 P N N 68 A1ACD P20 P N N 69 A1ACD H011 H N N 70 A1ACD H013 H N N 71 A1ACD H012 H N N 72 A1ACD H031 H N N 73 A1ACD H051 H N N 74 A1ACD H062 H N N 75 A1ACD H061 H N N 76 A1ACD H071 H N N 77 A1ACD H091 H N N 78 A1ACD H102 H N N 79 A1ACD H101 H N N 80 A1ACD H152 H N N 81 A1ACD H151 H N N 82 A1ACD H271 H N N 83 A1ACD H081 H N N 84 A1ACD H1 H N N 85 A1ACD H2 H N N 86 A1ACD H3 H N N 87 A1ACD H4 H N N 88 ALA N N N N 89 ALA CA C N S 90 ALA C C N N 91 ALA O O N N 92 ALA CB C N N 93 ALA OXT O N N 94 ALA H H N N 95 ALA H2 H N N 96 ALA HA H N N 97 ALA HB1 H N N 98 ALA HB2 H N N 99 ALA HB3 H N N 100 ALA HXT H N N 101 ARG N N N N 102 ARG CA C N S 103 ARG C C N N 104 ARG O O N N 105 ARG CB C N N 106 ARG CG C N N 107 ARG CD C N N 108 ARG NE N N N 109 ARG CZ C N N 110 ARG NH1 N N N 111 ARG NH2 N N N 112 ARG OXT O N N 113 ARG H H N N 114 ARG H2 H N N 115 ARG HA H N N 116 ARG HB2 H N N 117 ARG HB3 H N N 118 ARG HG2 H N N 119 ARG HG3 H N N 120 ARG HD2 H N N 121 ARG HD3 H N N 122 ARG HE H N N 123 ARG HH11 H N N 124 ARG HH12 H N N 125 ARG HH21 H N N 126 ARG HH22 H N N 127 ARG HXT H N N 128 ASN N N N N 129 ASN CA C N S 130 ASN C C N N 131 ASN O O N N 132 ASN CB C N N 133 ASN CG C N N 134 ASN OD1 O N N 135 ASN ND2 N N N 136 ASN OXT O N N 137 ASN H H N N 138 ASN H2 H N N 139 ASN HA H N N 140 ASN HB2 H N N 141 ASN HB3 H N N 142 ASN HD21 H N N 143 ASN HD22 H N N 144 ASN HXT H N N 145 ASP N N N N 146 ASP CA C N S 147 ASP C C N N 148 ASP O O N N 149 ASP CB C N N 150 ASP CG C N N 151 ASP OD1 O N N 152 ASP OD2 O N N 153 ASP OXT O N N 154 ASP H H N N 155 ASP H2 H N N 156 ASP HA H N N 157 ASP HB2 H N N 158 ASP HB3 H N N 159 ASP HD2 H N N 160 ASP HXT H N N 161 CYS N N N N 162 CYS CA C N R 163 CYS C C N N 164 CYS O O N N 165 CYS CB C N N 166 CYS SG S N N 167 CYS OXT O N N 168 CYS H H N N 169 CYS H2 H N N 170 CYS HA H N N 171 CYS HB2 H N N 172 CYS HB3 H N N 173 CYS HG H N N 174 CYS HXT H N N 175 DA OP3 O N N 176 DA P P N N 177 DA OP1 O N N 178 DA OP2 O N N 179 DA "O5'" O N N 180 DA "C5'" C N N 181 DA "C4'" C N R 182 DA "O4'" O N N 183 DA "C3'" C N S 184 DA "O3'" O N N 185 DA "C2'" C N N 186 DA "C1'" C N R 187 DA N9 N Y N 188 DA C8 C Y N 189 DA N7 N Y N 190 DA C5 C Y N 191 DA C6 C Y N 192 DA N6 N N N 193 DA N1 N Y N 194 DA C2 C Y N 195 DA N3 N Y N 196 DA C4 C Y N 197 DA HOP3 H N N 198 DA HOP2 H N N 199 DA "H5'" H N N 200 DA "H5''" H N N 201 DA "H4'" H N N 202 DA "H3'" H N N 203 DA "HO3'" H N N 204 DA "H2'" H N N 205 DA "H2''" H N N 206 DA "H1'" H N N 207 DA H8 H N N 208 DA H61 H N N 209 DA H62 H N N 210 DA H2 H N N 211 DC OP3 O N N 212 DC P P N N 213 DC OP1 O N N 214 DC OP2 O N N 215 DC "O5'" O N N 216 DC "C5'" C N N 217 DC "C4'" C N R 218 DC "O4'" O N N 219 DC "C3'" C N S 220 DC "O3'" O N N 221 DC "C2'" C N N 222 DC "C1'" C N R 223 DC N1 N N N 224 DC C2 C N N 225 DC O2 O N N 226 DC N3 N N N 227 DC C4 C N N 228 DC N4 N N N 229 DC C5 C N N 230 DC C6 C N N 231 DC HOP3 H N N 232 DC HOP2 H N N 233 DC "H5'" H N N 234 DC "H5''" H N N 235 DC "H4'" H N N 236 DC "H3'" H N N 237 DC "HO3'" H N N 238 DC "H2'" H N N 239 DC "H2''" H N N 240 DC "H1'" H N N 241 DC H41 H N N 242 DC H42 H N N 243 DC H5 H N N 244 DC H6 H N N 245 DG OP3 O N N 246 DG P P N N 247 DG OP1 O N N 248 DG OP2 O N N 249 DG "O5'" O N N 250 DG "C5'" C N N 251 DG "C4'" C N R 252 DG "O4'" O N N 253 DG "C3'" C N S 254 DG "O3'" O N N 255 DG "C2'" C N N 256 DG "C1'" C N R 257 DG N9 N Y N 258 DG C8 C Y N 259 DG N7 N Y N 260 DG C5 C Y N 261 DG C6 C N N 262 DG O6 O N N 263 DG N1 N N N 264 DG C2 C N N 265 DG N2 N N N 266 DG N3 N N N 267 DG C4 C Y N 268 DG HOP3 H N N 269 DG HOP2 H N N 270 DG "H5'" H N N 271 DG "H5''" H N N 272 DG "H4'" H N N 273 DG "H3'" H N N 274 DG "HO3'" H N N 275 DG "H2'" H N N 276 DG "H2''" H N N 277 DG "H1'" H N N 278 DG H8 H N N 279 DG H1 H N N 280 DG H21 H N N 281 DG H22 H N N 282 DT OP3 O N N 283 DT P P N N 284 DT OP1 O N N 285 DT OP2 O N N 286 DT "O5'" O N N 287 DT "C5'" C N N 288 DT "C4'" C N R 289 DT "O4'" O N N 290 DT "C3'" C N S 291 DT "O3'" O N N 292 DT "C2'" C N N 293 DT "C1'" C N R 294 DT N1 N N N 295 DT C2 C N N 296 DT O2 O N N 297 DT N3 N N N 298 DT C4 C N N 299 DT O4 O N N 300 DT C5 C N N 301 DT C7 C N N 302 DT C6 C N N 303 DT HOP3 H N N 304 DT HOP2 H N N 305 DT "H5'" H N N 306 DT "H5''" H N N 307 DT "H4'" H N N 308 DT "H3'" H N N 309 DT "HO3'" H N N 310 DT "H2'" H N N 311 DT "H2''" H N N 312 DT "H1'" H N N 313 DT H3 H N N 314 DT H71 H N N 315 DT H72 H N N 316 DT H73 H N N 317 DT H6 H N N 318 GLN N N N N 319 GLN CA C N S 320 GLN C C N N 321 GLN O O N N 322 GLN CB C N N 323 GLN CG C N N 324 GLN CD C N N 325 GLN OE1 O N N 326 GLN NE2 N N N 327 GLN OXT O N N 328 GLN H H N N 329 GLN H2 H N N 330 GLN HA H N N 331 GLN HB2 H N N 332 GLN HB3 H N N 333 GLN HG2 H N N 334 GLN HG3 H N N 335 GLN HE21 H N N 336 GLN HE22 H N N 337 GLN HXT H N N 338 GLU N N N N 339 GLU CA C N S 340 GLU C C N N 341 GLU O O N N 342 GLU CB C N N 343 GLU CG C N N 344 GLU CD C N N 345 GLU OE1 O N N 346 GLU OE2 O N N 347 GLU OXT O N N 348 GLU H H N N 349 GLU H2 H N N 350 GLU HA H N N 351 GLU HB2 H N N 352 GLU HB3 H N N 353 GLU HG2 H N N 354 GLU HG3 H N N 355 GLU HE2 H N N 356 GLU HXT H N N 357 GLY N N N N 358 GLY CA C N N 359 GLY C C N N 360 GLY O O N N 361 GLY OXT O N N 362 GLY H H N N 363 GLY H2 H N N 364 GLY HA2 H N N 365 GLY HA3 H N N 366 GLY HXT H N N 367 HIS N N N N 368 HIS CA C N S 369 HIS C C N N 370 HIS O O N N 371 HIS CB C N N 372 HIS CG C Y N 373 HIS ND1 N Y N 374 HIS CD2 C Y N 375 HIS CE1 C Y N 376 HIS NE2 N Y N 377 HIS OXT O N N 378 HIS H H N N 379 HIS H2 H N N 380 HIS HA H N N 381 HIS HB2 H N N 382 HIS HB3 H N N 383 HIS HD1 H N N 384 HIS HD2 H N N 385 HIS HE1 H N N 386 HIS HE2 H N N 387 HIS HXT H N N 388 HOH O O N N 389 HOH H1 H N N 390 HOH H2 H N N 391 ILE N N N N 392 ILE CA C N S 393 ILE C C N N 394 ILE O O N N 395 ILE CB C N S 396 ILE CG1 C N N 397 ILE CG2 C N N 398 ILE CD1 C N N 399 ILE OXT O N N 400 ILE H H N N 401 ILE H2 H N N 402 ILE HA H N N 403 ILE HB H N N 404 ILE HG12 H N N 405 ILE HG13 H N N 406 ILE HG21 H N N 407 ILE HG22 H N N 408 ILE HG23 H N N 409 ILE HD11 H N N 410 ILE HD12 H N N 411 ILE HD13 H N N 412 ILE HXT H N N 413 LEU N N N N 414 LEU CA C N S 415 LEU C C N N 416 LEU O O N N 417 LEU CB C N N 418 LEU CG C N N 419 LEU CD1 C N N 420 LEU CD2 C N N 421 LEU OXT O N N 422 LEU H H N N 423 LEU H2 H N N 424 LEU HA H N N 425 LEU HB2 H N N 426 LEU HB3 H N N 427 LEU HG H N N 428 LEU HD11 H N N 429 LEU HD12 H N N 430 LEU HD13 H N N 431 LEU HD21 H N N 432 LEU HD22 H N N 433 LEU HD23 H N N 434 LEU HXT H N N 435 LYS N N N N 436 LYS CA C N S 437 LYS C C N N 438 LYS O O N N 439 LYS CB C N N 440 LYS CG C N N 441 LYS CD C N N 442 LYS CE C N N 443 LYS NZ N N N 444 LYS OXT O N N 445 LYS H H N N 446 LYS H2 H N N 447 LYS HA H N N 448 LYS HB2 H N N 449 LYS HB3 H N N 450 LYS HG2 H N N 451 LYS HG3 H N N 452 LYS HD2 H N N 453 LYS HD3 H N N 454 LYS HE2 H N N 455 LYS HE3 H N N 456 LYS HZ1 H N N 457 LYS HZ2 H N N 458 LYS HZ3 H N N 459 LYS HXT H N N 460 MET N N N N 461 MET CA C N S 462 MET C C N N 463 MET O O N N 464 MET CB C N N 465 MET CG C N N 466 MET SD S N N 467 MET CE C N N 468 MET OXT O N N 469 MET H H N N 470 MET H2 H N N 471 MET HA H N N 472 MET HB2 H N N 473 MET HB3 H N N 474 MET HG2 H N N 475 MET HG3 H N N 476 MET HE1 H N N 477 MET HE2 H N N 478 MET HE3 H N N 479 MET HXT H N N 480 MN MN MN N N 481 NA NA NA N N 482 PHE N N N N 483 PHE CA C N S 484 PHE C C N N 485 PHE O O N N 486 PHE CB C N N 487 PHE CG C Y N 488 PHE CD1 C Y N 489 PHE CD2 C Y N 490 PHE CE1 C Y N 491 PHE CE2 C Y N 492 PHE CZ C Y N 493 PHE OXT O N N 494 PHE H H N N 495 PHE H2 H N N 496 PHE HA H N N 497 PHE HB2 H N N 498 PHE HB3 H N N 499 PHE HD1 H N N 500 PHE HD2 H N N 501 PHE HE1 H N N 502 PHE HE2 H N N 503 PHE HZ H N N 504 PHE HXT H N N 505 PRO N N N N 506 PRO CA C N S 507 PRO C C N N 508 PRO O O N N 509 PRO CB C N N 510 PRO CG C N N 511 PRO CD C N N 512 PRO OXT O N N 513 PRO H H N N 514 PRO HA H N N 515 PRO HB2 H N N 516 PRO HB3 H N N 517 PRO HG2 H N N 518 PRO HG3 H N N 519 PRO HD2 H N N 520 PRO HD3 H N N 521 PRO HXT H N N 522 SER N N N N 523 SER CA C N S 524 SER C C N N 525 SER O O N N 526 SER CB C N N 527 SER OG O N N 528 SER OXT O N N 529 SER H H N N 530 SER H2 H N N 531 SER HA H N N 532 SER HB2 H N N 533 SER HB3 H N N 534 SER HG H N N 535 SER HXT H N N 536 THR N N N N 537 THR CA C N S 538 THR C C N N 539 THR O O N N 540 THR CB C N R 541 THR OG1 O N N 542 THR CG2 C N N 543 THR OXT O N N 544 THR H H N N 545 THR H2 H N N 546 THR HA H N N 547 THR HB H N N 548 THR HG1 H N N 549 THR HG21 H N N 550 THR HG22 H N N 551 THR HG23 H N N 552 THR HXT H N N 553 TRP N N N N 554 TRP CA C N S 555 TRP C C N N 556 TRP O O N N 557 TRP CB C N N 558 TRP CG C Y N 559 TRP CD1 C Y N 560 TRP CD2 C Y N 561 TRP NE1 N Y N 562 TRP CE2 C Y N 563 TRP CE3 C Y N 564 TRP CZ2 C Y N 565 TRP CZ3 C Y N 566 TRP CH2 C Y N 567 TRP OXT O N N 568 TRP H H N N 569 TRP H2 H N N 570 TRP HA H N N 571 TRP HB2 H N N 572 TRP HB3 H N N 573 TRP HD1 H N N 574 TRP HE1 H N N 575 TRP HE3 H N N 576 TRP HZ2 H N N 577 TRP HZ3 H N N 578 TRP HH2 H N N 579 TRP HXT H N N 580 TYR N N N N 581 TYR CA C N S 582 TYR C C N N 583 TYR O O N N 584 TYR CB C N N 585 TYR CG C Y N 586 TYR CD1 C Y N 587 TYR CD2 C Y N 588 TYR CE1 C Y N 589 TYR CE2 C Y N 590 TYR CZ C Y N 591 TYR OH O N N 592 TYR OXT O N N 593 TYR H H N N 594 TYR H2 H N N 595 TYR HA H N N 596 TYR HB2 H N N 597 TYR HB3 H N N 598 TYR HD1 H N N 599 TYR HD2 H N N 600 TYR HE1 H N N 601 TYR HE2 H N N 602 TYR HH H N N 603 TYR HXT H N N 604 VAL N N N N 605 VAL CA C N S 606 VAL C C N N 607 VAL O O N N 608 VAL CB C N N 609 VAL CG1 C N N 610 VAL CG2 C N N 611 VAL OXT O N N 612 VAL H H N N 613 VAL H2 H N N 614 VAL HA H N N 615 VAL HB H N N 616 VAL HG11 H N N 617 VAL HG12 H N N 618 VAL HG13 H N N 619 VAL HG21 H N N 620 VAL HG22 H N N 621 VAL HG23 H N N 622 VAL HXT H N N 623 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8NI "C5'" "C4'" sing N N 1 8NI "C5'" "O5'" sing N N 2 8NI "O3'" "C3'" sing N N 3 8NI "C4'" "C3'" sing N N 4 8NI "C4'" "O4'" sing N N 5 8NI "C3'" "C2'" sing N N 6 8NI "O5'" P sing N N 7 8NI P OP2 sing N N 8 8NI P OP1 doub N N 9 8NI "O4'" "C1'" sing N N 10 8NI O8 C8 doub N N 11 8NI "C2'" "C1'" sing N N 12 8NI "C1'" N9 sing N N 13 8NI C8 N7 sing N N 14 8NI N7 C5 sing N N 15 8NI N9 C4 sing N N 16 8NI C5 C4 sing N N 17 8NI C5 C6 sing N N 18 8NI C4 N3 doub N N 19 8NI O6 C6 doub N N 20 8NI C6 N1 sing N N 21 8NI N3 C2 sing N N 22 8NI N1 C2 doub N N 23 8NI C2 N2 sing N N 24 8NI C5 H1 sing N N 25 8NI N2 H2 sing N N 26 8NI N2 H3 sing N N 27 8NI N7 H4 sing N N 28 8NI C8 H5 sing N N 29 8NI "C1'" H6 sing N N 30 8NI "C2'" H7 sing N N 31 8NI "C2'" H8 sing N N 32 8NI "C3'" H9 sing N N 33 8NI "C4'" H10 sing N N 34 8NI "C5'" H11 sing N N 35 8NI "C5'" H12 sing N N 36 8NI N9 H13 sing N N 37 8NI "O3'" H14 sing N N 38 8NI OP2 H16 sing N N 39 8NI P OP3 sing N N 40 8NI OP3 H15 sing N N 41 A1ACD C02 C01 sing N N 42 A1ACD C03 C02 doub N N 43 A1ACD N04 C03 sing N N 44 A1ACD C06 C05 sing N N 45 A1ACD C07 C06 sing N N 46 A1ACD O08 C07 sing N N 47 A1ACD C09 C07 sing N N 48 A1ACD O11 C10 sing N N 49 A1ACD P12 O11 sing N N 50 A1ACD O13 P12 doub N N 51 A1ACD O14 P12 sing N N 52 A1ACD C15 P12 sing N N 53 A1ACD P16 C15 sing N N 54 A1ACD O17 P16 doub N N 55 A1ACD O18 P16 sing N N 56 A1ACD O19 P16 sing N N 57 A1ACD P20 O19 sing N N 58 A1ACD O21 P20 doub N N 59 A1ACD O22 P20 sing N N 60 A1ACD O23 P20 sing N N 61 A1ACD C10 C09 sing N N 62 A1ACD O24 C09 sing N N 63 A1ACD C05 N04 sing N N 64 A1ACD C25 N04 sing N N 65 A1ACD O26 C25 doub N N 66 A1ACD N27 C25 sing N N 67 A1ACD C28 N27 sing N N 68 A1ACD O29 C28 doub N N 69 A1ACD C02 C28 sing N N 70 A1ACD C05 O24 sing N N 71 A1ACD C01 H011 sing N N 72 A1ACD C01 H013 sing N N 73 A1ACD C01 H012 sing N N 74 A1ACD C03 H031 sing N N 75 A1ACD C05 H051 sing N N 76 A1ACD C06 H062 sing N N 77 A1ACD C06 H061 sing N N 78 A1ACD C07 H071 sing N N 79 A1ACD C09 H091 sing N N 80 A1ACD C10 H102 sing N N 81 A1ACD C10 H101 sing N N 82 A1ACD C15 H152 sing N N 83 A1ACD C15 H151 sing N N 84 A1ACD N27 H271 sing N N 85 A1ACD O08 H081 sing N N 86 A1ACD O14 H1 sing N N 87 A1ACD O18 H2 sing N N 88 A1ACD O22 H3 sing N N 89 A1ACD O23 H4 sing N N 90 ALA N CA sing N N 91 ALA N H sing N N 92 ALA N H2 sing N N 93 ALA CA C sing N N 94 ALA CA CB sing N N 95 ALA CA HA sing N N 96 ALA C O doub N N 97 ALA C OXT sing N N 98 ALA CB HB1 sing N N 99 ALA CB HB2 sing N N 100 ALA CB HB3 sing N N 101 ALA OXT HXT sing N N 102 ARG N CA sing N N 103 ARG N H sing N N 104 ARG N H2 sing N N 105 ARG CA C sing N N 106 ARG CA CB sing N N 107 ARG CA HA sing N N 108 ARG C O doub N N 109 ARG C OXT sing N N 110 ARG CB CG sing N N 111 ARG CB HB2 sing N N 112 ARG CB HB3 sing N N 113 ARG CG CD sing N N 114 ARG CG HG2 sing N N 115 ARG CG HG3 sing N N 116 ARG CD NE sing N N 117 ARG CD HD2 sing N N 118 ARG CD HD3 sing N N 119 ARG NE CZ sing N N 120 ARG NE HE sing N N 121 ARG CZ NH1 sing N N 122 ARG CZ NH2 doub N N 123 ARG NH1 HH11 sing N N 124 ARG NH1 HH12 sing N N 125 ARG NH2 HH21 sing N N 126 ARG NH2 HH22 sing N N 127 ARG OXT HXT sing N N 128 ASN N CA sing N N 129 ASN N H sing N N 130 ASN N H2 sing N N 131 ASN CA C sing N N 132 ASN CA CB sing N N 133 ASN CA HA sing N N 134 ASN C O doub N N 135 ASN C OXT sing N N 136 ASN CB CG sing N N 137 ASN CB HB2 sing N N 138 ASN CB HB3 sing N N 139 ASN CG OD1 doub N N 140 ASN CG ND2 sing N N 141 ASN ND2 HD21 sing N N 142 ASN ND2 HD22 sing N N 143 ASN OXT HXT sing N N 144 ASP N CA sing N N 145 ASP N H sing N N 146 ASP N H2 sing N N 147 ASP CA C sing N N 148 ASP CA CB sing N N 149 ASP CA HA sing N N 150 ASP C O doub N N 151 ASP C OXT sing N N 152 ASP CB CG sing N N 153 ASP CB HB2 sing N N 154 ASP CB HB3 sing N N 155 ASP CG OD1 doub N N 156 ASP CG OD2 sing N N 157 ASP OD2 HD2 sing N N 158 ASP OXT HXT sing N N 159 CYS N CA sing N N 160 CYS N H sing N N 161 CYS N H2 sing N N 162 CYS CA C sing N N 163 CYS CA CB sing N N 164 CYS CA HA sing N N 165 CYS C O doub N N 166 CYS C OXT sing N N 167 CYS CB SG sing N N 168 CYS CB HB2 sing N N 169 CYS CB HB3 sing N N 170 CYS SG HG sing N N 171 CYS OXT HXT sing N N 172 DA OP3 P sing N N 173 DA OP3 HOP3 sing N N 174 DA P OP1 doub N N 175 DA P OP2 sing N N 176 DA P "O5'" sing N N 177 DA OP2 HOP2 sing N N 178 DA "O5'" "C5'" sing N N 179 DA "C5'" "C4'" sing N N 180 DA "C5'" "H5'" sing N N 181 DA "C5'" "H5''" sing N N 182 DA "C4'" "O4'" sing N N 183 DA "C4'" "C3'" sing N N 184 DA "C4'" "H4'" sing N N 185 DA "O4'" "C1'" sing N N 186 DA "C3'" "O3'" sing N N 187 DA "C3'" "C2'" sing N N 188 DA "C3'" "H3'" sing N N 189 DA "O3'" "HO3'" sing N N 190 DA "C2'" "C1'" sing N N 191 DA "C2'" "H2'" sing N N 192 DA "C2'" "H2''" sing N N 193 DA "C1'" N9 sing N N 194 DA "C1'" "H1'" sing N N 195 DA N9 C8 sing Y N 196 DA N9 C4 sing Y N 197 DA C8 N7 doub Y N 198 DA C8 H8 sing N N 199 DA N7 C5 sing Y N 200 DA C5 C6 sing Y N 201 DA C5 C4 doub Y N 202 DA C6 N6 sing N N 203 DA C6 N1 doub Y N 204 DA N6 H61 sing N N 205 DA N6 H62 sing N N 206 DA N1 C2 sing Y N 207 DA C2 N3 doub Y N 208 DA C2 H2 sing N N 209 DA N3 C4 sing Y N 210 DC OP3 P sing N N 211 DC OP3 HOP3 sing N N 212 DC P OP1 doub N N 213 DC P OP2 sing N N 214 DC P "O5'" sing N N 215 DC OP2 HOP2 sing N N 216 DC "O5'" "C5'" sing N N 217 DC "C5'" "C4'" sing N N 218 DC "C5'" "H5'" sing N N 219 DC "C5'" "H5''" sing N N 220 DC "C4'" "O4'" sing N N 221 DC "C4'" "C3'" sing N N 222 DC "C4'" "H4'" sing N N 223 DC "O4'" "C1'" sing N N 224 DC "C3'" "O3'" sing N N 225 DC "C3'" "C2'" sing N N 226 DC "C3'" "H3'" sing N N 227 DC "O3'" "HO3'" sing N N 228 DC "C2'" "C1'" sing N N 229 DC "C2'" "H2'" sing N N 230 DC "C2'" "H2''" sing N N 231 DC "C1'" N1 sing N N 232 DC "C1'" "H1'" sing N N 233 DC N1 C2 sing N N 234 DC N1 C6 sing N N 235 DC C2 O2 doub N N 236 DC C2 N3 sing N N 237 DC N3 C4 doub N N 238 DC C4 N4 sing N N 239 DC C4 C5 sing N N 240 DC N4 H41 sing N N 241 DC N4 H42 sing N N 242 DC C5 C6 doub N N 243 DC C5 H5 sing N N 244 DC C6 H6 sing N N 245 DG OP3 P sing N N 246 DG OP3 HOP3 sing N N 247 DG P OP1 doub N N 248 DG P OP2 sing N N 249 DG P "O5'" sing N N 250 DG OP2 HOP2 sing N N 251 DG "O5'" "C5'" sing N N 252 DG "C5'" "C4'" sing N N 253 DG "C5'" "H5'" sing N N 254 DG "C5'" "H5''" sing N N 255 DG "C4'" "O4'" sing N N 256 DG "C4'" "C3'" sing N N 257 DG "C4'" "H4'" sing N N 258 DG "O4'" "C1'" sing N N 259 DG "C3'" "O3'" sing N N 260 DG "C3'" "C2'" sing N N 261 DG "C3'" "H3'" sing N N 262 DG "O3'" "HO3'" sing N N 263 DG "C2'" "C1'" sing N N 264 DG "C2'" "H2'" sing N N 265 DG "C2'" "H2''" sing N N 266 DG "C1'" N9 sing N N 267 DG "C1'" "H1'" sing N N 268 DG N9 C8 sing Y N 269 DG N9 C4 sing Y N 270 DG C8 N7 doub Y N 271 DG C8 H8 sing N N 272 DG N7 C5 sing Y N 273 DG C5 C6 sing N N 274 DG C5 C4 doub Y N 275 DG C6 O6 doub N N 276 DG C6 N1 sing N N 277 DG N1 C2 sing N N 278 DG N1 H1 sing N N 279 DG C2 N2 sing N N 280 DG C2 N3 doub N N 281 DG N2 H21 sing N N 282 DG N2 H22 sing N N 283 DG N3 C4 sing N N 284 DT OP3 P sing N N 285 DT OP3 HOP3 sing N N 286 DT P OP1 doub N N 287 DT P OP2 sing N N 288 DT P "O5'" sing N N 289 DT OP2 HOP2 sing N N 290 DT "O5'" "C5'" sing N N 291 DT "C5'" "C4'" sing N N 292 DT "C5'" "H5'" sing N N 293 DT "C5'" "H5''" sing N N 294 DT "C4'" "O4'" sing N N 295 DT "C4'" "C3'" sing N N 296 DT "C4'" "H4'" sing N N 297 DT "O4'" "C1'" sing N N 298 DT "C3'" "O3'" sing N N 299 DT "C3'" "C2'" sing N N 300 DT "C3'" "H3'" sing N N 301 DT "O3'" "HO3'" sing N N 302 DT "C2'" "C1'" sing N N 303 DT "C2'" "H2'" sing N N 304 DT "C2'" "H2''" sing N N 305 DT "C1'" N1 sing N N 306 DT "C1'" "H1'" sing N N 307 DT N1 C2 sing N N 308 DT N1 C6 sing N N 309 DT C2 O2 doub N N 310 DT C2 N3 sing N N 311 DT N3 C4 sing N N 312 DT N3 H3 sing N N 313 DT C4 O4 doub N N 314 DT C4 C5 sing N N 315 DT C5 C7 sing N N 316 DT C5 C6 doub N N 317 DT C7 H71 sing N N 318 DT C7 H72 sing N N 319 DT C7 H73 sing N N 320 DT C6 H6 sing N N 321 GLN N CA sing N N 322 GLN N H sing N N 323 GLN N H2 sing N N 324 GLN CA C sing N N 325 GLN CA CB sing N N 326 GLN CA HA sing N N 327 GLN C O doub N N 328 GLN C OXT sing N N 329 GLN CB CG sing N N 330 GLN CB HB2 sing N N 331 GLN CB HB3 sing N N 332 GLN CG CD sing N N 333 GLN CG HG2 sing N N 334 GLN CG HG3 sing N N 335 GLN CD OE1 doub N N 336 GLN CD NE2 sing N N 337 GLN NE2 HE21 sing N N 338 GLN NE2 HE22 sing N N 339 GLN OXT HXT sing N N 340 GLU N CA sing N N 341 GLU N H sing N N 342 GLU N H2 sing N N 343 GLU CA C sing N N 344 GLU CA CB sing N N 345 GLU CA HA sing N N 346 GLU C O doub N N 347 GLU C OXT sing N N 348 GLU CB CG sing N N 349 GLU CB HB2 sing N N 350 GLU CB HB3 sing N N 351 GLU CG CD sing N N 352 GLU CG HG2 sing N N 353 GLU CG HG3 sing N N 354 GLU CD OE1 doub N N 355 GLU CD OE2 sing N N 356 GLU OE2 HE2 sing N N 357 GLU OXT HXT sing N N 358 GLY N CA sing N N 359 GLY N H sing N N 360 GLY N H2 sing N N 361 GLY CA C sing N N 362 GLY CA HA2 sing N N 363 GLY CA HA3 sing N N 364 GLY C O doub N N 365 GLY C OXT sing N N 366 GLY OXT HXT sing N N 367 HIS N CA sing N N 368 HIS N H sing N N 369 HIS N H2 sing N N 370 HIS CA C sing N N 371 HIS CA CB sing N N 372 HIS CA HA sing N N 373 HIS C O doub N N 374 HIS C OXT sing N N 375 HIS CB CG sing N N 376 HIS CB HB2 sing N N 377 HIS CB HB3 sing N N 378 HIS CG ND1 sing Y N 379 HIS CG CD2 doub Y N 380 HIS ND1 CE1 doub Y N 381 HIS ND1 HD1 sing N N 382 HIS CD2 NE2 sing Y N 383 HIS CD2 HD2 sing N N 384 HIS CE1 NE2 sing Y N 385 HIS CE1 HE1 sing N N 386 HIS NE2 HE2 sing N N 387 HIS OXT HXT sing N N 388 HOH O H1 sing N N 389 HOH O H2 sing N N 390 ILE N CA sing N N 391 ILE N H sing N N 392 ILE N H2 sing N N 393 ILE CA C sing N N 394 ILE CA CB sing N N 395 ILE CA HA sing N N 396 ILE C O doub N N 397 ILE C OXT sing N N 398 ILE CB CG1 sing N N 399 ILE CB CG2 sing N N 400 ILE CB HB sing N N 401 ILE CG1 CD1 sing N N 402 ILE CG1 HG12 sing N N 403 ILE CG1 HG13 sing N N 404 ILE CG2 HG21 sing N N 405 ILE CG2 HG22 sing N N 406 ILE CG2 HG23 sing N N 407 ILE CD1 HD11 sing N N 408 ILE CD1 HD12 sing N N 409 ILE CD1 HD13 sing N N 410 ILE OXT HXT sing N N 411 LEU N CA sing N N 412 LEU N H sing N N 413 LEU N H2 sing N N 414 LEU CA C sing N N 415 LEU CA CB sing N N 416 LEU CA HA sing N N 417 LEU C O doub N N 418 LEU C OXT sing N N 419 LEU CB CG sing N N 420 LEU CB HB2 sing N N 421 LEU CB HB3 sing N N 422 LEU CG CD1 sing N N 423 LEU CG CD2 sing N N 424 LEU CG HG sing N N 425 LEU CD1 HD11 sing N N 426 LEU CD1 HD12 sing N N 427 LEU CD1 HD13 sing N N 428 LEU CD2 HD21 sing N N 429 LEU CD2 HD22 sing N N 430 LEU CD2 HD23 sing N N 431 LEU OXT HXT sing N N 432 LYS N CA sing N N 433 LYS N H sing N N 434 LYS N H2 sing N N 435 LYS CA C sing N N 436 LYS CA CB sing N N 437 LYS CA HA sing N N 438 LYS C O doub N N 439 LYS C OXT sing N N 440 LYS CB CG sing N N 441 LYS CB HB2 sing N N 442 LYS CB HB3 sing N N 443 LYS CG CD sing N N 444 LYS CG HG2 sing N N 445 LYS CG HG3 sing N N 446 LYS CD CE sing N N 447 LYS CD HD2 sing N N 448 LYS CD HD3 sing N N 449 LYS CE NZ sing N N 450 LYS CE HE2 sing N N 451 LYS CE HE3 sing N N 452 LYS NZ HZ1 sing N N 453 LYS NZ HZ2 sing N N 454 LYS NZ HZ3 sing N N 455 LYS OXT HXT sing N N 456 MET N CA sing N N 457 MET N H sing N N 458 MET N H2 sing N N 459 MET CA C sing N N 460 MET CA CB sing N N 461 MET CA HA sing N N 462 MET C O doub N N 463 MET C OXT sing N N 464 MET CB CG sing N N 465 MET CB HB2 sing N N 466 MET CB HB3 sing N N 467 MET CG SD sing N N 468 MET CG HG2 sing N N 469 MET CG HG3 sing N N 470 MET SD CE sing N N 471 MET CE HE1 sing N N 472 MET CE HE2 sing N N 473 MET CE HE3 sing N N 474 MET OXT HXT sing N N 475 PHE N CA sing N N 476 PHE N H sing N N 477 PHE N H2 sing N N 478 PHE CA C sing N N 479 PHE CA CB sing N N 480 PHE CA HA sing N N 481 PHE C O doub N N 482 PHE C OXT sing N N 483 PHE CB CG sing N N 484 PHE CB HB2 sing N N 485 PHE CB HB3 sing N N 486 PHE CG CD1 doub Y N 487 PHE CG CD2 sing Y N 488 PHE CD1 CE1 sing Y N 489 PHE CD1 HD1 sing N N 490 PHE CD2 CE2 doub Y N 491 PHE CD2 HD2 sing N N 492 PHE CE1 CZ doub Y N 493 PHE CE1 HE1 sing N N 494 PHE CE2 CZ sing Y N 495 PHE CE2 HE2 sing N N 496 PHE CZ HZ sing N N 497 PHE OXT HXT sing N N 498 PRO N CA sing N N 499 PRO N CD sing N N 500 PRO N H sing N N 501 PRO CA C sing N N 502 PRO CA CB sing N N 503 PRO CA HA sing N N 504 PRO C O doub N N 505 PRO C OXT sing N N 506 PRO CB CG sing N N 507 PRO CB HB2 sing N N 508 PRO CB HB3 sing N N 509 PRO CG CD sing N N 510 PRO CG HG2 sing N N 511 PRO CG HG3 sing N N 512 PRO CD HD2 sing N N 513 PRO CD HD3 sing N N 514 PRO OXT HXT sing N N 515 SER N CA sing N N 516 SER N H sing N N 517 SER N H2 sing N N 518 SER CA C sing N N 519 SER CA CB sing N N 520 SER CA HA sing N N 521 SER C O doub N N 522 SER C OXT sing N N 523 SER CB OG sing N N 524 SER CB HB2 sing N N 525 SER CB HB3 sing N N 526 SER OG HG sing N N 527 SER OXT HXT sing N N 528 THR N CA sing N N 529 THR N H sing N N 530 THR N H2 sing N N 531 THR CA C sing N N 532 THR CA CB sing N N 533 THR CA HA sing N N 534 THR C O doub N N 535 THR C OXT sing N N 536 THR CB OG1 sing N N 537 THR CB CG2 sing N N 538 THR CB HB sing N N 539 THR OG1 HG1 sing N N 540 THR CG2 HG21 sing N N 541 THR CG2 HG22 sing N N 542 THR CG2 HG23 sing N N 543 THR OXT HXT sing N N 544 TRP N CA sing N N 545 TRP N H sing N N 546 TRP N H2 sing N N 547 TRP CA C sing N N 548 TRP CA CB sing N N 549 TRP CA HA sing N N 550 TRP C O doub N N 551 TRP C OXT sing N N 552 TRP CB CG sing N N 553 TRP CB HB2 sing N N 554 TRP CB HB3 sing N N 555 TRP CG CD1 doub Y N 556 TRP CG CD2 sing Y N 557 TRP CD1 NE1 sing Y N 558 TRP CD1 HD1 sing N N 559 TRP CD2 CE2 doub Y N 560 TRP CD2 CE3 sing Y N 561 TRP NE1 CE2 sing Y N 562 TRP NE1 HE1 sing N N 563 TRP CE2 CZ2 sing Y N 564 TRP CE3 CZ3 doub Y N 565 TRP CE3 HE3 sing N N 566 TRP CZ2 CH2 doub Y N 567 TRP CZ2 HZ2 sing N N 568 TRP CZ3 CH2 sing Y N 569 TRP CZ3 HZ3 sing N N 570 TRP CH2 HH2 sing N N 571 TRP OXT HXT sing N N 572 TYR N CA sing N N 573 TYR N H sing N N 574 TYR N H2 sing N N 575 TYR CA C sing N N 576 TYR CA CB sing N N 577 TYR CA HA sing N N 578 TYR C O doub N N 579 TYR C OXT sing N N 580 TYR CB CG sing N N 581 TYR CB HB2 sing N N 582 TYR CB HB3 sing N N 583 TYR CG CD1 doub Y N 584 TYR CG CD2 sing Y N 585 TYR CD1 CE1 sing Y N 586 TYR CD1 HD1 sing N N 587 TYR CD2 CE2 doub Y N 588 TYR CD2 HD2 sing N N 589 TYR CE1 CZ doub Y N 590 TYR CE1 HE1 sing N N 591 TYR CE2 CZ sing Y N 592 TYR CE2 HE2 sing N N 593 TYR CZ OH sing N N 594 TYR OH HH sing N N 595 TYR OXT HXT sing N N 596 VAL N CA sing N N 597 VAL N H sing N N 598 VAL N H2 sing N N 599 VAL CA C sing N N 600 VAL CA CB sing N N 601 VAL CA HA sing N N 602 VAL C O doub N N 603 VAL C OXT sing N N 604 VAL CB CG1 sing N N 605 VAL CB CG2 sing N N 606 VAL CB HB sing N N 607 VAL CG1 HG11 sing N N 608 VAL CG1 HG12 sing N N 609 VAL CG1 HG13 sing N N 610 VAL CG2 HG21 sing N N 611 VAL CG2 HG22 sing N N 612 VAL CG2 HG23 sing N N 613 VAL OXT HXT sing N N 614 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8VFD 'double helix' 8VFD 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 5 1_555 0.462 -0.289 0.213 0.221 -9.970 2.463 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 B DC 2 1_555 D DG 4 1_555 0.824 -0.574 0.218 15.778 -16.400 -11.735 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 B DG 3 1_555 D DC 3 1_555 -0.102 -0.274 -0.061 2.308 -1.955 -1.439 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 B DA 4 1_555 D DT 2 1_555 0.159 -0.146 -0.046 5.567 -3.114 2.404 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 B DC 5 1_555 D DG 1 1_555 0.125 0.026 -0.094 23.915 -7.392 3.735 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 B DT 7 1_555 C DA 10 1_555 -0.879 -0.308 0.101 -4.618 -15.689 12.301 6 T_DT7:DA10_P T 7 ? P 10 ? 20 1 1 B DC 8 1_555 C DG 9 1_555 0.358 -0.311 -0.158 -2.288 -5.630 -0.829 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 B DG 9 1_555 C DC 8 1_555 -0.183 -0.184 0.053 5.157 -8.165 1.014 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 B DC 10 1_555 C DG 7 1_555 0.386 -0.272 0.152 4.057 -9.768 0.774 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 B DA 11 1_555 C DT 6 1_555 0.201 0.011 0.074 1.644 -7.301 2.252 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 B DT 12 1_555 C DA 5 1_555 -0.240 -0.134 -0.071 8.037 -11.720 2.724 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 B DC 13 1_555 C DG 4 1_555 0.741 -0.312 0.044 1.210 -12.986 1.788 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 0.117 -0.133 0.252 1.053 -8.345 0.332 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 -0.155 -0.238 0.429 13.224 -5.841 -0.557 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 0.097 -0.256 0.148 10.625 -18.253 -2.003 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 5 1_555 B DC 2 1_555 D DG 4 1_555 0.110 -0.331 2.937 -0.807 -2.951 33.099 -0.134 -0.314 2.951 -5.167 1.412 33.236 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 B DC 2 1_555 D DG 4 1_555 B DG 3 1_555 D DC 3 1_555 0.505 0.711 3.740 2.945 -0.034 35.133 1.181 -0.331 3.768 -0.056 -4.868 35.252 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 B DG 3 1_555 D DC 3 1_555 B DA 4 1_555 D DT 2 1_555 -0.359 -0.197 3.253 -0.864 -1.269 37.457 -0.140 0.446 3.265 -1.975 1.345 37.488 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 B DA 4 1_555 D DT 2 1_555 B DC 5 1_555 D DG 1 1_555 0.958 -0.540 2.853 -2.307 3.823 29.854 -1.698 -2.240 2.685 7.368 4.447 30.179 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 B DT 7 1_555 C DA 10 1_555 B DC 8 1_555 C DG 9 1_555 -0.890 0.066 3.352 0.477 -0.034 34.513 0.116 1.575 3.339 -0.057 -0.804 34.517 5 TT_DT7DC8:DG9DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 B DC 8 1_555 C DG 9 1_555 B DG 9 1_555 C DC 8 1_555 -0.357 0.795 3.265 -3.734 11.157 33.270 -0.419 0.010 3.370 18.771 6.282 35.233 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 B DG 9 1_555 C DC 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.209 -0.428 3.311 -1.028 4.023 32.903 -1.429 0.193 3.242 7.068 1.806 33.157 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DA 11 1_555 C DT 6 1_555 -0.395 -0.342 3.224 -0.784 6.534 36.157 -1.415 0.522 3.125 10.421 1.251 36.732 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 B DA 11 1_555 C DT 6 1_555 B DT 12 1_555 C DA 5 1_555 0.115 -0.439 3.101 1.178 -4.220 29.630 -0.014 0.011 3.134 -8.195 -2.287 29.945 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 0.253 0.207 3.362 0.694 1.191 43.154 0.161 -0.273 3.370 1.619 -0.944 43.175 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 B DC 13 1_555 C DG 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.578 0.050 3.175 -2.893 2.617 36.296 -0.274 0.531 3.206 4.186 4.627 36.498 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.688 -0.508 3.016 -2.966 -1.729 29.213 -0.662 -1.937 2.958 -3.412 5.856 29.409 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 B DG 15 1_555 C DC 2 1_555 B DC 16 1_555 C DG 1 1_555 -0.491 -0.795 3.229 -0.875 5.533 38.367 -1.856 0.636 3.099 8.365 1.323 38.758 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01ES-027558 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8NI _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8NI _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7S9O _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8VFD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.018598 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006010 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012647 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019331 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MN ? ? 20.23591 4.67902 ? ? 2.76514 44.01191 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_