HEADER DE NOVO PROTEIN 03-FEB-24 8VX7 TITLE COMPUTATIONALLY DESIGNED TUNABLE C2 SYMMETRIC TANDEM REPEAT HOMODIMER, TITLE 2 BOUND TO CYCLIC PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CID7; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MC1; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630 KEYWDS HOMODIMER, DE NOVO, DESIGNED, CTRP, COMPUTATIONAL, C2 SYMMETRIC, KEYWDS 2 CIRCULAR TANDEM REPEAT PROTEIN, CYCLIC PEPTIDE, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.KENNEDY,B.L.STODDARD,M.SAID REVDAT 1 05-FEB-25 8VX7 0 JRNL AUTH M.A.KENNEDY,B.L.STODDARD,M.SAID JRNL TITL COMPUTATIONALLY DESIGNED TUNABLE C2 SYMMETRIC TANDEM REPEAT JRNL TITL 2 HOMODIMER, BOUND TO CYCLIC PEPTIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 7766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1300 - 4.9900 1.00 1268 142 0.2299 0.2408 REMARK 3 2 4.9900 - 3.9600 1.00 1196 132 0.2312 0.2937 REMARK 3 3 3.9600 - 3.4600 1.00 1167 129 0.2549 0.2928 REMARK 3 4 3.4600 - 3.1400 1.00 1161 130 0.2850 0.3810 REMARK 3 5 3.1400 - 2.9200 0.99 1150 127 0.3230 0.4249 REMARK 3 6 2.9200 - 2.7500 0.92 1047 117 0.3339 0.4044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2245 REMARK 3 ANGLE : 0.397 3061 REMARK 3 CHIRALITY : 0.029 395 REMARK 3 PLANARITY : 0.001 384 REMARK 3 DIHEDRAL : 12.471 360 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -10.9335 -2.6667 14.6198 REMARK 3 T TENSOR REMARK 3 T11: 0.3277 T22: 0.5303 REMARK 3 T33: 0.3288 T12: -0.0782 REMARK 3 T13: 0.0081 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 1.9309 L22: 3.3277 REMARK 3 L33: 3.5265 L12: -0.3157 REMARK 3 L13: 0.4795 L23: -0.3741 REMARK 3 S TENSOR REMARK 3 S11: -0.1406 S12: -0.2046 S13: 0.0340 REMARK 3 S21: 0.0345 S22: -0.0211 S23: 0.0316 REMARK 3 S31: -0.2409 S32: -0.0759 S33: 0.1194 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8VX7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281352. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7827 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.20 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 4000, 0.1 M SODIUM ACETATE, PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.71700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.96950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.90100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.96950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.71700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.90100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 161 REMARK 465 SER B 0 REMARK 465 LEU B 161 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 13 CG CD1 CD2 REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 SER A 25 OG REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LEU A 27 CG CD1 CD2 REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 LEU A 36 CG CD1 CD2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 45 CD CE NZ REMARK 470 GLN A 49 OE1 NE2 REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 HIS A 66 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 LYS A 72 CD CE NZ REMARK 470 LYS A 82 NZ REMARK 470 LYS A 99 NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 GLU A 112 CD OE1 OE2 REMARK 470 LYS A 115 CD CE NZ REMARK 470 LYS A 116 CE NZ REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 128 CD OE1 OE2 REMARK 470 LEU A 130 CG CD1 CD2 REMARK 470 LYS A 131 CD CE NZ REMARK 470 LEU A 133 CD1 CD2 REMARK 470 ARG A 142 NE CZ NH1 NH2 REMARK 470 SER A 146 OG REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 GLU A 148 CG CD OE1 OE2 REMARK 470 VAL A 149 CG1 CG2 REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 GLN A 156 CG CD OE1 NE2 REMARK 470 LEU A 157 CG CD1 CD2 REMARK 470 GLU A 158 OE1 OE2 REMARK 470 ARG A 159 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 160 CG CD1 CD2 REMARK 470 LEU B 2 CD1 CD2 REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 GLU B 6 CD OE1 OE2 REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 SER B 11 OG REMARK 470 LEU B 13 CD1 CD2 REMARK 470 LYS B 18 CG CD CE NZ REMARK 470 GLU B 19 OE1 OE2 REMARK 470 LYS B 22 CG CD CE NZ REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 GLU B 31 CG CD OE1 OE2 REMARK 470 GLU B 33 CG CD OE1 OE2 REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 LEU B 36 CG CD1 CD2 REMARK 470 ASP B 42 CG OD1 OD2 REMARK 470 LYS B 45 CE NZ REMARK 470 VAL B 54 CG1 CG2 REMARK 470 ASP B 56 OD1 OD2 REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 GLU B 62 CD OE1 OE2 REMARK 470 LEU B 64 CD1 CD2 REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 LYS B 72 CE NZ REMARK 470 ARG B 73 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 77 CG CD1 CD2 REMARK 470 LYS B 82 NZ REMARK 470 SER B 86 OG REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 LYS B 99 CG CD CE NZ REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 105 CD OE1 OE2 REMARK 470 LEU B 106 CD1 CD2 REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 470 LYS B 115 CG CD CE NZ REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 GLU B 119 CG CD OE1 OE2 REMARK 470 GLU B 122 CD OE1 OE2 REMARK 470 GLU B 123 OE1 OE2 REMARK 470 ARG B 127 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 128 CG CD OE1 OE2 REMARK 470 LEU B 136 CD1 CD2 REMARK 470 ARG B 142 CG CD NE CZ NH1 NH2 REMARK 470 SER B 146 OG REMARK 470 GLU B 147 CG CD OE1 OE2 REMARK 470 GLU B 148 CG CD OE1 OE2 REMARK 470 VAL B 149 CG1 CG2 REMARK 470 LYS B 150 CD CE NZ REMARK 470 GLU B 155 CG CD OE1 OE2 REMARK 470 GLN B 156 CG CD OE1 NE2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 ARG B 159 CZ NH1 NH2 REMARK 470 LEU B 160 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DPR C 1 CA DPR C 1 C 0.160 REMARK 500 DAL C 4 C DPR C 5 N 0.155 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DPR C 5 O - C - N ANGL. DEV. = -9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 57 -51.20 -122.89 REMARK 500 MEA C 3 -127.87 -118.93 REMARK 500 DPR C 5 -162.53 42.11 REMARK 500 MEA C 7 -163.17 -101.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 8VX7 A 0 161 PDB 8VX7 8VX7 0 161 DBREF 8VX7 B 0 161 PDB 8VX7 8VX7 0 161 DBREF 8VX7 C 1 8 PDB 8VX7 8VX7 1 8 SEQRES 1 A 162 SER MET LEU GLU GLU ILE GLU ARG LEU VAL LEU SER GLY SEQRES 2 A 162 LEU LEU THR GLY ASP LYS GLU LEU LEU LYS LYS ALA SER SEQRES 3 A 162 GLU LEU LEU LYS GLU GLU MET GLU LYS LEU LEU GLU GLU SEQRES 4 A 162 GLY ASP LEU ASP ALA LEU LYS LYS ALA LEU GLN LEU ALA SEQRES 5 A 162 VAL ASN VAL ALA ASP HIS ASN GLY ASP LYS GLU LEU LEU SEQRES 6 A 162 ALA HIS ALA ALA GLU VAL ILE LYS ARG ALA LEU ASP LEU SEQRES 7 A 162 ALA LEU GLU ALA LYS ASP LEU GLN SER ALA LYS TYR LEU SEQRES 8 A 162 ALA SER LEU ALA LEU TRP ILE ALA LYS ARG ALA GLY ASP SEQRES 9 A 162 LYS GLU LEU TYR ALA TYR LEU GLU GLU LYS ILE LYS LYS SEQRES 10 A 162 ILE ILE GLU LEU ALA GLU GLU ALA GLY ASP ARG GLU SER SEQRES 11 A 162 LEU LYS ILE LEU ILE LEU LEU GLY ILE PHE ILE ALA ARG SEQRES 12 A 162 ASP ALA GLY SER GLU GLU VAL LYS ALA PHE VAL ALA GLU SEQRES 13 A 162 GLN LEU GLU ARG LEU LEU SEQRES 1 B 162 SER MET LEU GLU GLU ILE GLU ARG LEU VAL LEU SER GLY SEQRES 2 B 162 LEU LEU THR GLY ASP LYS GLU LEU LEU LYS LYS ALA SER SEQRES 3 B 162 GLU LEU LEU LYS GLU GLU MET GLU LYS LEU LEU GLU GLU SEQRES 4 B 162 GLY ASP LEU ASP ALA LEU LYS LYS ALA LEU GLN LEU ALA SEQRES 5 B 162 VAL ASN VAL ALA ASP HIS ASN GLY ASP LYS GLU LEU LEU SEQRES 6 B 162 ALA HIS ALA ALA GLU VAL ILE LYS ARG ALA LEU ASP LEU SEQRES 7 B 162 ALA LEU GLU ALA LYS ASP LEU GLN SER ALA LYS TYR LEU SEQRES 8 B 162 ALA SER LEU ALA LEU TRP ILE ALA LYS ARG ALA GLY ASP SEQRES 9 B 162 LYS GLU LEU TYR ALA TYR LEU GLU GLU LYS ILE LYS LYS SEQRES 10 B 162 ILE ILE GLU LEU ALA GLU GLU ALA GLY ASP ARG GLU SER SEQRES 11 B 162 LEU LYS ILE LEU ILE LEU LEU GLY ILE PHE ILE ALA ARG SEQRES 12 B 162 ASP ALA GLY SER GLU GLU VAL LYS ALA PHE VAL ALA GLU SEQRES 13 B 162 GLN LEU GLU ARG LEU LEU SEQRES 1 C 8 DPR MLE MEA DAL DPR MLE MEA DAL HET DPR C 1 7 HET MLE C 2 9 HET MEA C 3 12 HET DAL C 4 5 HET DPR C 5 7 HET MLE C 6 9 HET MEA C 7 12 HET DAL C 8 5 HETNAM DPR D-PROLINE HETNAM MLE N-METHYLLEUCINE HETNAM MEA N-METHYLPHENYLALANINE HETNAM DAL D-ALANINE FORMUL 3 DPR 2(C5 H9 N O2) FORMUL 3 MLE 2(C7 H15 N O2) FORMUL 3 MEA 2(C10 H13 N O2) FORMUL 3 DAL 2(C3 H7 N O2) FORMUL 4 HOH *3(H2 O) HELIX 1 AA1 SER A 0 GLY A 16 1 17 HELIX 2 AA2 ASP A 17 GLY A 39 1 23 HELIX 3 AA3 ASP A 40 GLY A 59 1 20 HELIX 4 AA4 ASP A 60 ALA A 81 1 22 HELIX 5 AA5 ASP A 83 GLY A 102 1 20 HELIX 6 AA6 ASP A 103 GLY A 125 1 23 HELIX 7 AA7 ASP A 126 ALA A 144 1 19 HELIX 8 AA8 SER A 146 LEU A 160 1 15 HELIX 9 AA9 LEU B 2 GLY B 16 1 15 HELIX 10 AB1 ASP B 17 GLY B 39 1 23 HELIX 11 AB2 ASP B 40 GLY B 59 1 20 HELIX 12 AB3 LYS B 61 ALA B 81 1 21 HELIX 13 AB4 ASP B 83 GLY B 102 1 20 HELIX 14 AB5 ASP B 103 GLY B 125 1 23 HELIX 15 AB6 ASP B 126 ALA B 144 1 19 HELIX 16 AB7 SER B 146 ARG B 159 1 14 LINK C DPR C 1 N MLE C 2 1555 1555 1.46 LINK N DPR C 1 C DAL C 8 1555 1555 1.48 LINK C MLE C 2 N MEA C 3 1555 1555 1.44 LINK C MEA C 3 N DAL C 4 1555 1555 1.43 LINK C DAL C 4 N DPR C 5 1555 1555 1.49 LINK C DPR C 5 N MLE C 6 1555 1555 1.44 LINK C MLE C 6 N MEA C 7 1555 1555 1.44 LINK C MEA C 7 N DAL C 8 1555 1555 1.43 CISPEP 1 MLE C 2 MEA C 3 0 0.72 CISPEP 2 MLE C 6 MEA C 7 0 0.67 CRYST1 33.434 79.802 105.939 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009439 0.00000