HEADER TRANSFERASE/INHIBITOR 09-FEB-24 8VYO TITLE CRYO-EM STRUCTURE OF THE BRAF WT MONOMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE B-RAF; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE B-RAF,P94,V-RAF MURINE SARCOMA VIRAL ONCOGENE COMPND 5 HOMOLOG B1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA; COMPND 10 CHAIN: B, C; COMPND 11 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRAF, BRAF1, RAFB1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS BRAF KINASE MONOMER, TRANSFERASE-INHIBITOR COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR H.LAVOIE,D.LAJOIE,T.JIN,M.DECOSSAS,P.MAISONNEUVE,M.THERRIEN REVDAT 3 25-JUN-25 8VYO 1 JRNL REVDAT 2 11-JUN-25 8VYO 1 JRNL REVDAT 1 28-MAY-25 8VYO 0 JRNL AUTH H.LAVOIE,T.JIN,D.LAJOIE,M.DECOSSAS,P.GENDRON,B.WANG, JRNL AUTH 2 F.FILANDR,M.SAHMI,C.HWA JO,S.WEBER,G.ARSENEAULT,S.TRIPATHY, JRNL AUTH 3 P.BEAULIEU,D.A.SCHUETZ,D.C.SCHRIEMER,A.MARINIER,W.J.RICE, JRNL AUTH 4 P.MAISONNEUVE,M.THERRIEN JRNL TITL BRAF ONCOGENIC MUTANTS EVADE AUTOINHIBITION THROUGH A COMMON JRNL TITL 2 MECHANISM. JRNL REF SCIENCE V. 388 P2742 2025 JRNL REFN ESSN 1095-9203 JRNL PMID 40440367 JRNL DOI 10.1126/SCIENCE.ADP2742 REMARK 2 REMARK 2 RESOLUTION. 3.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, CTFFIND, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.740 REMARK 3 NUMBER OF PARTICLES : 45060 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: RESOLUTION CORRESPONDS TO THE FSC 0.143 CUT-OFF OF REMARK 3 THE MASKED MAP. REMARK 4 REMARK 4 8VYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281480. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BRAF WT - 14.3.3 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : CHAMELEON SYSTEM (SPT LABTECH) REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : BRAF COMPLEX PURIFIED BY FLAG REMARK 245 AFFINITY PURIFICATION FOLLOWED BY TEV ELUTION FROM FREESTYLE REMARK 245 293F CELLS REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1100.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1700.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5566.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 GLY A 8 REMARK 465 GLY A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 GLU A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 15 REMARK 465 GLN A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 PHE A 19 REMARK 465 ASN A 20 REMARK 465 GLY A 21 REMARK 465 ASP A 22 REMARK 465 MET A 23 REMARK 465 GLU A 24 REMARK 465 PRO A 25 REMARK 465 GLU A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 GLY A 30 REMARK 465 ALA A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 ALA A 34 REMARK 465 ALA A 35 REMARK 465 SER A 36 REMARK 465 SER A 37 REMARK 465 ALA A 38 REMARK 465 ALA A 39 REMARK 465 ASP A 40 REMARK 465 PRO A 41 REMARK 465 ALA A 42 REMARK 465 ILE A 43 REMARK 465 PRO A 44 REMARK 465 GLU A 45 REMARK 465 GLU A 46 REMARK 465 VAL A 47 REMARK 465 TRP A 48 REMARK 465 ASN A 49 REMARK 465 ILE A 50 REMARK 465 LYS A 51 REMARK 465 GLN A 52 REMARK 465 MET A 53 REMARK 465 ILE A 54 REMARK 465 LYS A 55 REMARK 465 LEU A 56 REMARK 465 THR A 57 REMARK 465 GLN A 58 REMARK 465 GLU A 59 REMARK 465 HIS A 60 REMARK 465 ILE A 61 REMARK 465 GLU A 62 REMARK 465 ALA A 63 REMARK 465 LEU A 64 REMARK 465 LEU A 65 REMARK 465 ASP A 66 REMARK 465 LYS A 67 REMARK 465 PHE A 68 REMARK 465 GLY A 69 REMARK 465 GLY A 70 REMARK 465 GLU A 71 REMARK 465 HIS A 72 REMARK 465 ASN A 73 REMARK 465 PRO A 74 REMARK 465 PRO A 75 REMARK 465 SER A 76 REMARK 465 ILE A 77 REMARK 465 TYR A 78 REMARK 465 LEU A 79 REMARK 465 GLU A 80 REMARK 465 ALA A 81 REMARK 465 TYR A 82 REMARK 465 GLU A 83 REMARK 465 GLU A 84 REMARK 465 TYR A 85 REMARK 465 THR A 86 REMARK 465 SER A 87 REMARK 465 LYS A 88 REMARK 465 LEU A 89 REMARK 465 ASP A 90 REMARK 465 ALA A 91 REMARK 465 LEU A 92 REMARK 465 GLN A 93 REMARK 465 GLN A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 GLN A 97 REMARK 465 GLN A 98 REMARK 465 LEU A 99 REMARK 465 LEU A 100 REMARK 465 GLU A 101 REMARK 465 SER A 102 REMARK 465 LEU A 103 REMARK 465 GLY A 104 REMARK 465 ASN A 105 REMARK 465 GLY A 106 REMARK 465 THR A 107 REMARK 465 ASP A 108 REMARK 465 PHE A 109 REMARK 465 SER A 110 REMARK 465 VAL A 111 REMARK 465 SER A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 ALA A 115 REMARK 465 SER A 116 REMARK 465 MET A 117 REMARK 465 ASP A 118 REMARK 465 THR A 119 REMARK 465 VAL A 120 REMARK 465 THR A 121 REMARK 465 SER A 122 REMARK 465 SER A 123 REMARK 465 SER A 124 REMARK 465 SER A 125 REMARK 465 SER A 126 REMARK 465 SER A 127 REMARK 465 LEU A 128 REMARK 465 SER A 129 REMARK 465 VAL A 130 REMARK 465 LEU A 131 REMARK 465 PRO A 132 REMARK 465 SER A 133 REMARK 465 SER A 134 REMARK 465 LEU A 135 REMARK 465 SER A 136 REMARK 465 VAL A 137 REMARK 465 PHE A 138 REMARK 465 GLN A 139 REMARK 465 ASN A 140 REMARK 465 PRO A 141 REMARK 465 THR A 142 REMARK 465 ASP A 143 REMARK 465 VAL A 144 REMARK 465 ALA A 145 REMARK 465 ARG A 146 REMARK 465 SER A 147 REMARK 465 ASN A 148 REMARK 465 PRO A 149 REMARK 465 LYS A 150 REMARK 465 SER A 151 REMARK 465 PRO A 152 REMARK 465 GLN A 153 REMARK 465 LYS A 154 REMARK 465 PRO A 155 REMARK 465 ILE A 156 REMARK 465 VAL A 157 REMARK 465 ARG A 158 REMARK 465 VAL A 159 REMARK 465 PHE A 160 REMARK 465 LEU A 161 REMARK 465 PRO A 162 REMARK 465 ASN A 163 REMARK 465 LYS A 164 REMARK 465 GLN A 165 REMARK 465 ARG A 166 REMARK 465 THR A 167 REMARK 465 VAL A 168 REMARK 465 VAL A 169 REMARK 465 PRO A 170 REMARK 465 ALA A 171 REMARK 465 ARG A 172 REMARK 465 CYS A 173 REMARK 465 GLY A 174 REMARK 465 VAL A 175 REMARK 465 THR A 176 REMARK 465 VAL A 177 REMARK 465 ARG A 178 REMARK 465 ASP A 179 REMARK 465 SER A 180 REMARK 465 LEU A 181 REMARK 465 LYS A 182 REMARK 465 LYS A 183 REMARK 465 ALA A 184 REMARK 465 LEU A 185 REMARK 465 MET A 186 REMARK 465 MET A 187 REMARK 465 ARG A 188 REMARK 465 GLY A 189 REMARK 465 LEU A 190 REMARK 465 ILE A 191 REMARK 465 PRO A 192 REMARK 465 GLU A 193 REMARK 465 CYS A 194 REMARK 465 CYS A 195 REMARK 465 ALA A 196 REMARK 465 VAL A 197 REMARK 465 TYR A 198 REMARK 465 ARG A 199 REMARK 465 ILE A 200 REMARK 465 GLN A 201 REMARK 465 ASP A 202 REMARK 465 GLY A 203 REMARK 465 GLU A 204 REMARK 465 LYS A 205 REMARK 465 LYS A 206 REMARK 465 PRO A 207 REMARK 465 ILE A 208 REMARK 465 GLY A 209 REMARK 465 TRP A 210 REMARK 465 ASP A 211 REMARK 465 THR A 212 REMARK 465 ASP A 213 REMARK 465 ILE A 214 REMARK 465 SER A 215 REMARK 465 TRP A 216 REMARK 465 LEU A 217 REMARK 465 THR A 218 REMARK 465 GLY A 219 REMARK 465 GLU A 220 REMARK 465 GLU A 221 REMARK 465 LEU A 222 REMARK 465 HIS A 223 REMARK 465 VAL A 224 REMARK 465 GLU A 225 REMARK 465 VAL A 226 REMARK 465 LEU A 227 REMARK 465 GLU A 228 REMARK 465 ASN A 229 REMARK 465 VAL A 230 REMARK 465 PRO A 231 REMARK 465 LEU A 232 REMARK 465 THR A 233 REMARK 465 THR A 234 REMARK 465 ARG A 271 REMARK 465 CYS A 272 REMARK 465 SER A 273 REMARK 465 THR A 274 REMARK 465 GLU A 275 REMARK 465 VAL A 276 REMARK 465 PRO A 277 REMARK 465 LEU A 278 REMARK 465 MET A 279 REMARK 465 CYS A 280 REMARK 465 VAL A 281 REMARK 465 ASN A 282 REMARK 465 TYR A 283 REMARK 465 ASP A 284 REMARK 465 GLN A 285 REMARK 465 LEU A 286 REMARK 465 ASP A 287 REMARK 465 LEU A 288 REMARK 465 LEU A 289 REMARK 465 PHE A 290 REMARK 465 VAL A 291 REMARK 465 SER A 292 REMARK 465 LYS A 293 REMARK 465 PHE A 294 REMARK 465 PHE A 295 REMARK 465 GLU A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 PRO A 299 REMARK 465 ILE A 300 REMARK 465 PRO A 301 REMARK 465 GLN A 302 REMARK 465 GLU A 303 REMARK 465 GLU A 304 REMARK 465 ALA A 305 REMARK 465 SER A 306 REMARK 465 LEU A 307 REMARK 465 ALA A 308 REMARK 465 GLU A 309 REMARK 465 THR A 310 REMARK 465 ALA A 311 REMARK 465 LEU A 312 REMARK 465 THR A 313 REMARK 465 SER A 314 REMARK 465 GLY A 315 REMARK 465 SER A 316 REMARK 465 SER A 317 REMARK 465 PRO A 318 REMARK 465 SER A 319 REMARK 465 ALA A 320 REMARK 465 PRO A 321 REMARK 465 ALA A 322 REMARK 465 SER A 323 REMARK 465 ASP A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 GLY A 327 REMARK 465 PRO A 328 REMARK 465 GLN A 329 REMARK 465 ILE A 330 REMARK 465 LEU A 331 REMARK 465 THR A 332 REMARK 465 SER A 333 REMARK 465 PRO A 334 REMARK 465 SER A 335 REMARK 465 PRO A 336 REMARK 465 SER A 337 REMARK 465 LYS A 338 REMARK 465 SER A 339 REMARK 465 ILE A 340 REMARK 465 PRO A 341 REMARK 465 ILE A 342 REMARK 465 PRO A 343 REMARK 465 GLN A 344 REMARK 465 PRO A 345 REMARK 465 PHE A 346 REMARK 465 ARG A 347 REMARK 465 PRO A 348 REMARK 465 ALA A 349 REMARK 465 ASP A 350 REMARK 465 GLU A 351 REMARK 465 ASP A 352 REMARK 465 HIS A 353 REMARK 465 ARG A 354 REMARK 465 ASN A 355 REMARK 465 GLN A 356 REMARK 465 PHE A 357 REMARK 465 GLY A 358 REMARK 465 GLN A 359 REMARK 465 ARG A 360 REMARK 465 ILE A 371 REMARK 465 ASN A 372 REMARK 465 THR A 373 REMARK 465 ILE A 374 REMARK 465 GLU A 375 REMARK 465 PRO A 376 REMARK 465 VAL A 377 REMARK 465 ASN A 378 REMARK 465 ILE A 379 REMARK 465 ASP A 380 REMARK 465 ASP A 381 REMARK 465 LEU A 382 REMARK 465 ILE A 383 REMARK 465 ARG A 384 REMARK 465 ASP A 385 REMARK 465 GLN A 386 REMARK 465 GLY A 387 REMARK 465 PHE A 388 REMARK 465 ARG A 389 REMARK 465 GLY A 390 REMARK 465 ASP A 391 REMARK 465 GLY A 392 REMARK 465 GLY A 393 REMARK 465 SER A 394 REMARK 465 THR A 395 REMARK 465 THR A 396 REMARK 465 GLY A 397 REMARK 465 LEU A 398 REMARK 465 SER A 399 REMARK 465 ALA A 400 REMARK 465 THR A 401 REMARK 465 PRO A 402 REMARK 465 PRO A 403 REMARK 465 ALA A 404 REMARK 465 SER A 405 REMARK 465 LEU A 406 REMARK 465 PRO A 407 REMARK 465 GLY A 408 REMARK 465 SER A 409 REMARK 465 LEU A 410 REMARK 465 THR A 411 REMARK 465 ASN A 412 REMARK 465 VAL A 413 REMARK 465 LYS A 414 REMARK 465 ALA A 415 REMARK 465 LEU A 416 REMARK 465 GLN A 417 REMARK 465 LYS A 418 REMARK 465 SER A 419 REMARK 465 PRO A 420 REMARK 465 GLY A 421 REMARK 465 PRO A 422 REMARK 465 GLN A 423 REMARK 465 ARG A 424 REMARK 465 GLU A 425 REMARK 465 ARG A 426 REMARK 465 LYS A 427 REMARK 465 SER A 428 REMARK 465 SER A 429 REMARK 465 SER A 430 REMARK 465 SER A 431 REMARK 465 SER A 432 REMARK 465 GLU A 433 REMARK 465 ASP A 434 REMARK 465 ARG A 435 REMARK 465 ASN A 436 REMARK 465 ARG A 437 REMARK 465 MET A 438 REMARK 465 LYS A 439 REMARK 465 THR A 440 REMARK 465 LEU A 441 REMARK 465 GLY A 442 REMARK 465 ARG A 443 REMARK 465 ARG A 444 REMARK 465 ASP A 445 REMARK 465 SER A 446 REMARK 465 SER A 447 REMARK 465 ASP A 448 REMARK 465 ASP A 449 REMARK 465 TRP A 450 REMARK 465 GLU A 451 REMARK 465 ILE A 452 REMARK 465 PRO A 453 REMARK 465 ASP A 454 REMARK 465 GLY A 455 REMARK 465 GLN A 456 REMARK 465 ILE A 457 REMARK 465 THR A 458 REMARK 465 VAL A 459 REMARK 465 GLY A 460 REMARK 465 ARG A 603 REMARK 465 TRP A 604 REMARK 465 SER A 605 REMARK 465 GLY A 606 REMARK 465 SER A 607 REMARK 465 HIS A 608 REMARK 465 GLN A 609 REMARK 465 PHE A 610 REMARK 465 GLU A 611 REMARK 465 GLN A 612 REMARK 465 LEU A 613 REMARK 465 SER A 614 REMARK 465 GLN A 628 REMARK 465 ASP A 629 REMARK 465 LYS A 630 REMARK 465 GLN A 739 REMARK 465 THR A 740 REMARK 465 GLU A 741 REMARK 465 ASP A 742 REMARK 465 PHE A 743 REMARK 465 SER A 744 REMARK 465 LEU A 745 REMARK 465 TYR A 746 REMARK 465 ALA A 747 REMARK 465 CYS A 748 REMARK 465 ALA A 749 REMARK 465 SER A 750 REMARK 465 PRO A 751 REMARK 465 LYS A 752 REMARK 465 THR A 753 REMARK 465 PRO A 754 REMARK 465 ILE A 755 REMARK 465 GLN A 756 REMARK 465 ALA A 757 REMARK 465 GLY A 758 REMARK 465 GLY A 759 REMARK 465 TYR A 760 REMARK 465 GLY A 761 REMARK 465 ALA A 762 REMARK 465 PHE A 763 REMARK 465 PRO A 764 REMARK 465 VAL A 765 REMARK 465 HIS A 766 REMARK 465 GLU B 70 REMARK 465 GLY B 71 REMARK 465 ALA B 134 REMARK 465 GLY B 135 REMARK 465 ASP B 136 REMARK 465 ASP B 137 REMARK 465 GLU C 70 REMARK 465 GLY C 71 REMARK 465 ALA C 72 REMARK 465 ILE C 155 REMARK 465 SER C 156 REMARK 465 LYS C 157 REMARK 465 LYS C 158 REMARK 465 GLU C 159 REMARK 465 MET C 160 REMARK 465 GLN C 161 REMARK 465 SER C 230 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 103 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 124 HH TYR B 149 1.50 REMARK 500 O GLU C 209 HG SER C 210 1.50 REMARK 500 OE1 GLN A 653 HG SER A 657 1.54 REMARK 500 O SER B 210 HG SER B 214 1.54 REMARK 500 OD1 ASP A 249 HZ3 LYS A 267 1.57 REMARK 500 NH1 ARG A 252 OE1 GLU A 703 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 468 21.85 -147.45 REMARK 500 ASN A 486 -126.26 -96.20 REMARK 500 GLN A 524 72.71 56.01 REMARK 500 ARG A 575 -45.69 66.71 REMARK 500 ASP A 576 55.43 -151.24 REMARK 500 ASP A 587 -0.96 64.16 REMARK 500 ASP A 594 17.56 56.46 REMARK 500 ASN A 661 97.76 -70.00 REMARK 500 ARG C 18 56.67 -100.23 REMARK 500 PHE C 104 -58.97 -127.94 REMARK 500 ALA C 109 22.78 -151.99 REMARK 500 GLN C 111 11.28 57.15 REMARK 500 GLU C 202 -56.90 -124.93 REMARK 500 LEU C 203 -129.67 43.03 REMARK 500 ASP C 204 -37.51 67.93 REMARK 500 SER C 210 65.41 60.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 235 ND1 REMARK 620 2 CYS A 261 SG 72.2 REMARK 620 3 THR A 263 OG1 152.6 94.0 REMARK 620 4 CYS A 264 SG 69.7 85.8 86.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 248 SG REMARK 620 2 CYS A 251 SG 114.1 REMARK 620 3 HIS A 269 ND1 89.3 95.2 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43673 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE BRAF WT MONOMER DBREF 8VYO A 1 766 UNP P15056 BRAF_HUMAN 1 766 DBREF 8VYO B 2 230 UNP P63104 1433Z_HUMAN 2 230 DBREF 8VYO C 2 230 UNP P63104 1433Z_HUMAN 2 230 SEQADV 8VYO GLY A 0 UNP P15056 EXPRESSION TAG SEQRES 1 A 767 GLY MET ALA ALA LEU SER GLY GLY GLY GLY GLY GLY ALA SEQRES 2 A 767 GLU PRO GLY GLN ALA LEU PHE ASN GLY ASP MET GLU PRO SEQRES 3 A 767 GLU ALA GLY ALA GLY ALA GLY ALA ALA ALA SER SER ALA SEQRES 4 A 767 ALA ASP PRO ALA ILE PRO GLU GLU VAL TRP ASN ILE LYS SEQRES 5 A 767 GLN MET ILE LYS LEU THR GLN GLU HIS ILE GLU ALA LEU SEQRES 6 A 767 LEU ASP LYS PHE GLY GLY GLU HIS ASN PRO PRO SER ILE SEQRES 7 A 767 TYR LEU GLU ALA TYR GLU GLU TYR THR SER LYS LEU ASP SEQRES 8 A 767 ALA LEU GLN GLN ARG GLU GLN GLN LEU LEU GLU SER LEU SEQRES 9 A 767 GLY ASN GLY THR ASP PHE SER VAL SER SER SER ALA SER SEQRES 10 A 767 MET ASP THR VAL THR SER SER SER SER SER SER LEU SER SEQRES 11 A 767 VAL LEU PRO SER SER LEU SER VAL PHE GLN ASN PRO THR SEQRES 12 A 767 ASP VAL ALA ARG SER ASN PRO LYS SER PRO GLN LYS PRO SEQRES 13 A 767 ILE VAL ARG VAL PHE LEU PRO ASN LYS GLN ARG THR VAL SEQRES 14 A 767 VAL PRO ALA ARG CYS GLY VAL THR VAL ARG ASP SER LEU SEQRES 15 A 767 LYS LYS ALA LEU MET MET ARG GLY LEU ILE PRO GLU CYS SEQRES 16 A 767 CYS ALA VAL TYR ARG ILE GLN ASP GLY GLU LYS LYS PRO SEQRES 17 A 767 ILE GLY TRP ASP THR ASP ILE SER TRP LEU THR GLY GLU SEQRES 18 A 767 GLU LEU HIS VAL GLU VAL LEU GLU ASN VAL PRO LEU THR SEQRES 19 A 767 THR HIS ASN PHE VAL ARG LYS THR PHE PHE THR LEU ALA SEQRES 20 A 767 PHE CYS ASP PHE CYS ARG LYS LEU LEU PHE GLN GLY PHE SEQRES 21 A 767 ARG CYS GLN THR CYS GLY TYR LYS PHE HIS GLN ARG CYS SEQRES 22 A 767 SER THR GLU VAL PRO LEU MET CYS VAL ASN TYR ASP GLN SEQRES 23 A 767 LEU ASP LEU LEU PHE VAL SER LYS PHE PHE GLU HIS HIS SEQRES 24 A 767 PRO ILE PRO GLN GLU GLU ALA SER LEU ALA GLU THR ALA SEQRES 25 A 767 LEU THR SER GLY SER SER PRO SER ALA PRO ALA SER ASP SEQRES 26 A 767 SER ILE GLY PRO GLN ILE LEU THR SER PRO SER PRO SER SEQRES 27 A 767 LYS SER ILE PRO ILE PRO GLN PRO PHE ARG PRO ALA ASP SEQRES 28 A 767 GLU ASP HIS ARG ASN GLN PHE GLY GLN ARG ASP ARG SER SEQRES 29 A 767 SER SEP ALA PRO ASN VAL HIS ILE ASN THR ILE GLU PRO SEQRES 30 A 767 VAL ASN ILE ASP ASP LEU ILE ARG ASP GLN GLY PHE ARG SEQRES 31 A 767 GLY ASP GLY GLY SER THR THR GLY LEU SER ALA THR PRO SEQRES 32 A 767 PRO ALA SER LEU PRO GLY SER LEU THR ASN VAL LYS ALA SEQRES 33 A 767 LEU GLN LYS SER PRO GLY PRO GLN ARG GLU ARG LYS SER SEQRES 34 A 767 SER SER SER SER GLU ASP ARG ASN ARG MET LYS THR LEU SEQRES 35 A 767 GLY ARG ARG ASP SER SER ASP ASP TRP GLU ILE PRO ASP SEQRES 36 A 767 GLY GLN ILE THR VAL GLY GLN ARG ILE GLY SER GLY SER SEQRES 37 A 767 PHE GLY THR VAL TYR LYS GLY LYS TRP HIS GLY ASP VAL SEQRES 38 A 767 ALA VAL LYS MET LEU ASN VAL THR ALA PRO THR PRO GLN SEQRES 39 A 767 GLN LEU GLN ALA PHE LYS ASN GLU VAL GLY VAL LEU ARG SEQRES 40 A 767 LYS THR ARG HIS VAL ASN ILE LEU LEU PHE MET GLY TYR SEQRES 41 A 767 SER THR LYS PRO GLN LEU ALA ILE VAL THR GLN TRP CYS SEQRES 42 A 767 GLU GLY SER SER LEU TYR HIS HIS LEU HIS ILE ILE GLU SEQRES 43 A 767 THR LYS PHE GLU MET ILE LYS LEU ILE ASP ILE ALA ARG SEQRES 44 A 767 GLN THR ALA GLN GLY MET ASP TYR LEU HIS ALA LYS SER SEQRES 45 A 767 ILE ILE HIS ARG ASP LEU LYS SER ASN ASN ILE PHE LEU SEQRES 46 A 767 HIS GLU ASP LEU THR VAL LYS ILE GLY ASP PHE GLY LEU SEQRES 47 A 767 ALA THR VAL LYS SER ARG TRP SER GLY SER HIS GLN PHE SEQRES 48 A 767 GLU GLN LEU SER GLY SER ILE LEU TRP MET ALA PRO GLU SEQRES 49 A 767 VAL ILE ARG MET GLN ASP LYS ASN PRO TYR SER PHE GLN SEQRES 50 A 767 SER ASP VAL TYR ALA PHE GLY ILE VAL LEU TYR GLU LEU SEQRES 51 A 767 MET THR GLY GLN LEU PRO TYR SER ASN ILE ASN ASN ARG SEQRES 52 A 767 ASP GLN ILE ILE PHE MET VAL GLY ARG GLY TYR LEU SER SEQRES 53 A 767 PRO ASP LEU SER LYS VAL ARG SER ASN CYS PRO LYS ALA SEQRES 54 A 767 MET LYS ARG LEU MET ALA GLU CYS LEU LYS LYS LYS ARG SEQRES 55 A 767 ASP GLU ARG PRO LEU PHE PRO GLN ILE LEU ALA SER ILE SEQRES 56 A 767 GLU LEU LEU ALA ARG SER LEU PRO LYS ILE HIS ARG SER SEQRES 57 A 767 ALA SEP GLU PRO SER LEU ASN ARG ALA GLY PHE GLN THR SEQRES 58 A 767 GLU ASP PHE SER LEU TYR ALA CYS ALA SER PRO LYS THR SEQRES 59 A 767 PRO ILE GLN ALA GLY GLY TYR GLY ALA PHE PRO VAL HIS SEQRES 1 B 229 ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA GLU SEQRES 2 B 229 GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET LYS SEQRES 3 B 229 SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU GLU SEQRES 4 B 229 ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL GLY SEQRES 5 B 229 ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE GLU SEQRES 6 B 229 GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET ALA SEQRES 7 B 229 ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG ASP SEQRES 8 B 229 ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE LEU SEQRES 9 B 229 ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE TYR SEQRES 10 B 229 LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA GLU SEQRES 11 B 229 VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP GLN SEQRES 12 B 229 SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER LYS SEQRES 13 B 229 LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY LEU SEQRES 14 B 229 ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SEQRES 15 B 229 SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA PHE SEQRES 16 B 229 ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU GLU SEQRES 17 B 229 SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU ARG SEQRES 18 B 229 ASP ASN LEU THR LEU TRP THR SER SEQRES 1 C 229 ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA GLU SEQRES 2 C 229 GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET LYS SEQRES 3 C 229 SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU GLU SEQRES 4 C 229 ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL GLY SEQRES 5 C 229 ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE GLU SEQRES 6 C 229 GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET ALA SEQRES 7 C 229 ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG ASP SEQRES 8 C 229 ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE LEU SEQRES 9 C 229 ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE TYR SEQRES 10 C 229 LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA GLU SEQRES 11 C 229 VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP GLN SEQRES 12 C 229 SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER LYS SEQRES 13 C 229 LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY LEU SEQRES 14 C 229 ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SEQRES 15 C 229 SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA PHE SEQRES 16 C 229 ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU GLU SEQRES 17 C 229 SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU ARG SEQRES 18 C 229 ASP ASN LEU THR LEU TRP THR SER MODRES 8VYO SEP A 365 SER MODIFIED RESIDUE MODRES 8VYO SEP A 729 SER MODIFIED RESIDUE HET SEP A 365 14 HET SEP A 729 14 HET ZN A 901 1 HET ZN A 902 1 HETNAM SEP PHOSPHOSERINE HETNAM ZN ZINC ION HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 4 ZN 2(ZN 2+) HELIX 1 AA1 THR A 491 ARG A 506 1 16 HELIX 2 AA2 SER A 536 ILE A 543 1 8 HELIX 3 AA3 GLU A 549 LYS A 570 1 22 HELIX 4 AA4 LYS A 578 ASN A 580 5 3 HELIX 5 AA5 LEU A 597 LYS A 601 5 5 HELIX 6 AA6 ALA A 621 ARG A 626 1 6 HELIX 7 AA7 GLN A 636 GLY A 652 1 17 HELIX 8 AA8 ASN A 661 ARG A 671 1 11 HELIX 9 AA9 ASP A 677 VAL A 681 5 5 HELIX 10 AB1 PRO A 686 LEU A 697 1 12 HELIX 11 AB2 LYS A 700 ARG A 704 5 5 HELIX 12 AB3 LEU A 706 ILE A 724 1 19 HELIX 13 AB4 LYS B 3 ALA B 16 1 14 HELIX 14 AB5 ARG B 18 GLN B 32 1 15 HELIX 15 AB6 SER B 37 GLU B 66 1 30 HELIX 16 AB7 GLU B 73 LEU B 105 1 33 HELIX 17 AB8 ILE B 106 ALA B 109 5 4 HELIX 18 AB9 GLN B 111 ALA B 133 1 23 HELIX 19 AC1 GLY B 140 MET B 160 1 21 HELIX 20 AC2 HIS B 164 ILE B 181 1 18 HELIX 21 AC3 SER B 184 GLU B 202 1 19 HELIX 22 AC4 GLU B 209 SER B 230 1 22 HELIX 23 AC5 LYS C 3 ALA C 16 1 14 HELIX 24 AC6 ARG C 18 GLU C 31 1 14 HELIX 25 AC7 SER C 37 LYS C 68 1 32 HELIX 26 AC8 LYS C 74 PHE C 104 1 31 HELIX 27 AC9 GLU C 113 ALA C 133 1 21 HELIX 28 AD1 ALA C 134 ALA C 152 1 19 HELIX 29 AD2 HIS C 164 ILE C 181 1 18 HELIX 30 AD3 SER C 184 ALA C 201 1 18 HELIX 31 AD4 THR C 205 SER C 210 1 6 HELIX 32 AD5 SER C 210 THR C 229 1 20 SHEET 1 AA1 2 PHE A 237 THR A 241 0 SHEET 2 AA1 2 GLN A 257 CYS A 261 -1 O GLY A 258 N LYS A 240 SHEET 1 AA2 5 ARG A 462 GLY A 464 0 SHEET 2 AA2 5 GLY A 469 TYR A 472 -1 O VAL A 471 N GLY A 464 SHEET 3 AA2 5 VAL A 480 LEU A 485 -1 O VAL A 482 N TYR A 472 SHEET 4 AA2 5 ALA A 526 GLN A 530 -1 O ILE A 527 N LYS A 483 SHEET 5 AA2 5 PHE A 516 TYR A 519 -1 N GLY A 518 O VAL A 528 SHEET 1 AA3 2 ILE A 582 LEU A 584 0 SHEET 2 AA3 2 VAL A 590 ILE A 592 -1 O LYS A 591 N PHE A 583 LINK C SER A 364 N SEP A 365 1555 1555 1.33 LINK C SEP A 365 N ALA A 366 1555 1555 1.33 LINK C ALA A 728 N SEP A 729 1555 1555 1.33 LINK C SEP A 729 N GLU A 730 1555 1555 1.33 LINK ND1 HIS A 235 ZN ZN A 902 1555 1555 2.30 LINK SG CYS A 248 ZN ZN A 901 1555 1555 2.29 LINK SG CYS A 251 ZN ZN A 901 1555 1555 2.30 LINK SG CYS A 261 ZN ZN A 902 1555 1555 2.29 LINK OG1 THR A 263 ZN ZN A 902 1555 1555 2.36 LINK SG CYS A 264 ZN ZN A 902 1555 1555 2.30 LINK ND1 HIS A 269 ZN ZN A 901 1555 1555 2.29 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 712078 CONECT 23612077 CONECT 27912077 CONECT 46212078 CONECT 49012078 CONECT 50412078 CONECT 58612077 CONECT 663 672 CONECT 672 663 673 682 CONECT 673 672 674 676 683 CONECT 674 673 675 684 685 CONECT 675 674 678 CONECT 676 673 677 686 CONECT 677 676 CONECT 678 675 679 680 681 CONECT 679 678 CONECT 680 678 CONECT 681 678 CONECT 682 672 CONECT 683 673 CONECT 684 674 CONECT 685 674 CONECT 686 676 CONECT 4854 4862 CONECT 4862 4854 4863 4872 CONECT 4863 4862 4864 4866 4873 CONECT 4864 4863 4865 4874 4875 CONECT 4865 4864 4868 CONECT 4866 4863 4867 4876 CONECT 4867 4866 CONECT 4868 4865 4869 4870 4871 CONECT 4869 4868 CONECT 4870 4868 CONECT 4871 4868 CONECT 4872 4862 CONECT 4873 4863 CONECT 4874 4864 CONECT 4875 4864 CONECT 4876 4866 CONECT12077 236 279 586 CONECT12078 7 462 490 504 MASTER 659 0 4 32 9 0 0 6 6036 3 41 95 END