data_8VZ6 # _entry.id 8VZ6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VZ6 pdb_00008vz6 10.2210/pdb8vz6/pdb WWPDB D_1000281512 ? ? EMDB EMD-43682 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-02-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VZ6 _pdbx_database_status.recvd_initial_deposition_date 2024-02-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'PbAbiF dimer bound to ncRNA' _pdbx_database_related.db_id EMD-43682 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email zhang@broadinstitute.org _pdbx_contact_author.name_first Feng _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0178-7995 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wilkinson, M.E.' 1 0000-0003-4738-9503 'Zilberzwige-Tal, S.' 2 0000-0001-9223-5082 'Altae-Tran, H.' 3 0000-0003-1083-4802 'Zhang, F.' 4 0000-0003-0178-7995 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Emergence of a CRISPR RNA-guiding mechanism from a type III toxin-antitoxin system' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zilberzwige-Tal, S.' 1 0000-0001-9223-5082 primary 'Altae-Tran, H.' 2 0000-0003-1083-4802 primary 'Kannan, S.' 3 ? primary 'Wilkinson, M.E.' 4 0000-0003-4738-9503 primary 'Vo, S.C.' 5 ? primary 'Shmakov, S.' 6 ? primary 'Yao, C.J.' 7 ? primary 'Strebinger, D.' 8 ? primary 'Edmonds, K.K.' 9 ? primary 'Mears, K.S.' 10 ? primary 'Makarova, K.S.' 11 ? primary 'Macrae, R.K.' 12 ? primary 'Koonin, E.V.' 13 ? primary 'Zhang, F.' 14 0000-0003-0178-7995 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Abi family protein' 35008.711 2 ? ? ? ? 2 polymer man 'AbiF ncRNA' 15954.489 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSNRIPFPKPYTSAHDLVSLLQSRGLTIADTAKTERYLEFIGYYRLSAYMYPLLQMPKEQHRYKPNTTFDQVMMLYRFDK KLRLLIFNEIEKIEVAVRSAIVNIGSDMIGSPFWMTDGSNFIDPRKFRHTMDLIDAELGRSREDFIVHFKQTYSDAYPPA WILAEVLPFGVITNIFSNIKTARIKKSIARKFGLQVAPFESWLTIVALTRNSCCHHARVWNKQNTIRPMIPNRMTGRWII LPTDALRIYFNLCIIKYFLDIISPQNDMKAKIDALLSSYSSIDINAMGFPRGWESEPLWQ ; ;MSNRIPFPKPYTSAHDLVSLLQSRGLTIADTAKTERYLEFIGYYRLSAYMYPLLQMPKEQHRYKPNTTFDQVMMLYRFDK KLRLLIFNEIEKIEVAVRSAIVNIGSDMIGSPFWMTDGSNFIDPRKFRHTMDLIDAELGRSREDFIVHFKQTYSDAYPPA WILAEVLPFGVITNIFSNIKTARIKKSIARKFGLQVAPFESWLTIVALTRNSCCHHARVWNKQNTIRPMIPNRMTGRWII LPTDALRIYFNLCIIKYFLDIISPQNDMKAKIDALLSSYSSIDINAMGFPRGWESEPLWQ ; A,B ? 2 polyribonucleotide no no ACUAGAACCCGCCAAGCCUCUCAACGAUGCUCAAAUGUGCGGGUCGUUUU ACUAGAACCCGCCAAGCCUCUCAACGAUGCUCAAAUGUGCGGGUCGUUUU R,S ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ASN n 1 4 ARG n 1 5 ILE n 1 6 PRO n 1 7 PHE n 1 8 PRO n 1 9 LYS n 1 10 PRO n 1 11 TYR n 1 12 THR n 1 13 SER n 1 14 ALA n 1 15 HIS n 1 16 ASP n 1 17 LEU n 1 18 VAL n 1 19 SER n 1 20 LEU n 1 21 LEU n 1 22 GLN n 1 23 SER n 1 24 ARG n 1 25 GLY n 1 26 LEU n 1 27 THR n 1 28 ILE n 1 29 ALA n 1 30 ASP n 1 31 THR n 1 32 ALA n 1 33 LYS n 1 34 THR n 1 35 GLU n 1 36 ARG n 1 37 TYR n 1 38 LEU n 1 39 GLU n 1 40 PHE n 1 41 ILE n 1 42 GLY n 1 43 TYR n 1 44 TYR n 1 45 ARG n 1 46 LEU n 1 47 SER n 1 48 ALA n 1 49 TYR n 1 50 MET n 1 51 TYR n 1 52 PRO n 1 53 LEU n 1 54 LEU n 1 55 GLN n 1 56 MET n 1 57 PRO n 1 58 LYS n 1 59 GLU n 1 60 GLN n 1 61 HIS n 1 62 ARG n 1 63 TYR n 1 64 LYS n 1 65 PRO n 1 66 ASN n 1 67 THR n 1 68 THR n 1 69 PHE n 1 70 ASP n 1 71 GLN n 1 72 VAL n 1 73 MET n 1 74 MET n 1 75 LEU n 1 76 TYR n 1 77 ARG n 1 78 PHE n 1 79 ASP n 1 80 LYS n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LEU n 1 85 LEU n 1 86 ILE n 1 87 PHE n 1 88 ASN n 1 89 GLU n 1 90 ILE n 1 91 GLU n 1 92 LYS n 1 93 ILE n 1 94 GLU n 1 95 VAL n 1 96 ALA n 1 97 VAL n 1 98 ARG n 1 99 SER n 1 100 ALA n 1 101 ILE n 1 102 VAL n 1 103 ASN n 1 104 ILE n 1 105 GLY n 1 106 SER n 1 107 ASP n 1 108 MET n 1 109 ILE n 1 110 GLY n 1 111 SER n 1 112 PRO n 1 113 PHE n 1 114 TRP n 1 115 MET n 1 116 THR n 1 117 ASP n 1 118 GLY n 1 119 SER n 1 120 ASN n 1 121 PHE n 1 122 ILE n 1 123 ASP n 1 124 PRO n 1 125 ARG n 1 126 LYS n 1 127 PHE n 1 128 ARG n 1 129 HIS n 1 130 THR n 1 131 MET n 1 132 ASP n 1 133 LEU n 1 134 ILE n 1 135 ASP n 1 136 ALA n 1 137 GLU n 1 138 LEU n 1 139 GLY n 1 140 ARG n 1 141 SER n 1 142 ARG n 1 143 GLU n 1 144 ASP n 1 145 PHE n 1 146 ILE n 1 147 VAL n 1 148 HIS n 1 149 PHE n 1 150 LYS n 1 151 GLN n 1 152 THR n 1 153 TYR n 1 154 SER n 1 155 ASP n 1 156 ALA n 1 157 TYR n 1 158 PRO n 1 159 PRO n 1 160 ALA n 1 161 TRP n 1 162 ILE n 1 163 LEU n 1 164 ALA n 1 165 GLU n 1 166 VAL n 1 167 LEU n 1 168 PRO n 1 169 PHE n 1 170 GLY n 1 171 VAL n 1 172 ILE n 1 173 THR n 1 174 ASN n 1 175 ILE n 1 176 PHE n 1 177 SER n 1 178 ASN n 1 179 ILE n 1 180 LYS n 1 181 THR n 1 182 ALA n 1 183 ARG n 1 184 ILE n 1 185 LYS n 1 186 LYS n 1 187 SER n 1 188 ILE n 1 189 ALA n 1 190 ARG n 1 191 LYS n 1 192 PHE n 1 193 GLY n 1 194 LEU n 1 195 GLN n 1 196 VAL n 1 197 ALA n 1 198 PRO n 1 199 PHE n 1 200 GLU n 1 201 SER n 1 202 TRP n 1 203 LEU n 1 204 THR n 1 205 ILE n 1 206 VAL n 1 207 ALA n 1 208 LEU n 1 209 THR n 1 210 ARG n 1 211 ASN n 1 212 SER n 1 213 CYS n 1 214 CYS n 1 215 HIS n 1 216 HIS n 1 217 ALA n 1 218 ARG n 1 219 VAL n 1 220 TRP n 1 221 ASN n 1 222 LYS n 1 223 GLN n 1 224 ASN n 1 225 THR n 1 226 ILE n 1 227 ARG n 1 228 PRO n 1 229 MET n 1 230 ILE n 1 231 PRO n 1 232 ASN n 1 233 ARG n 1 234 MET n 1 235 THR n 1 236 GLY n 1 237 ARG n 1 238 TRP n 1 239 ILE n 1 240 ILE n 1 241 LEU n 1 242 PRO n 1 243 THR n 1 244 ASP n 1 245 ALA n 1 246 LEU n 1 247 ARG n 1 248 ILE n 1 249 TYR n 1 250 PHE n 1 251 ASN n 1 252 LEU n 1 253 CYS n 1 254 ILE n 1 255 ILE n 1 256 LYS n 1 257 TYR n 1 258 PHE n 1 259 LEU n 1 260 ASP n 1 261 ILE n 1 262 ILE n 1 263 SER n 1 264 PRO n 1 265 GLN n 1 266 ASN n 1 267 ASP n 1 268 MET n 1 269 LYS n 1 270 ALA n 1 271 LYS n 1 272 ILE n 1 273 ASP n 1 274 ALA n 1 275 LEU n 1 276 LEU n 1 277 SER n 1 278 SER n 1 279 TYR n 1 280 SER n 1 281 SER n 1 282 ILE n 1 283 ASP n 1 284 ILE n 1 285 ASN n 1 286 ALA n 1 287 MET n 1 288 GLY n 1 289 PHE n 1 290 PRO n 1 291 ARG n 1 292 GLY n 1 293 TRP n 1 294 GLU n 1 295 SER n 1 296 GLU n 1 297 PRO n 1 298 LEU n 1 299 TRP n 1 300 GLN n 2 1 A n 2 2 C n 2 3 U n 2 4 A n 2 5 G n 2 6 A n 2 7 A n 2 8 C n 2 9 C n 2 10 C n 2 11 G n 2 12 C n 2 13 C n 2 14 A n 2 15 A n 2 16 G n 2 17 C n 2 18 C n 2 19 U n 2 20 C n 2 21 U n 2 22 C n 2 23 A n 2 24 A n 2 25 C n 2 26 G n 2 27 A n 2 28 U n 2 29 G n 2 30 C n 2 31 U n 2 32 C n 2 33 A n 2 34 A n 2 35 A n 2 36 U n 2 37 G n 2 38 U n 2 39 G n 2 40 C n 2 41 G n 2 42 G n 2 43 G n 2 44 U n 2 45 C n 2 46 G n 2 47 U n 2 48 U n 2 49 U n 2 50 U n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 300 ? ? ? ? ? ? ? 'NCBI GCA_900316285.1 contig: ONCG01000034.1 start 16721 end 17623 strand +' ? 'uncultured Prevotellaceae bacterium' 370804 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 50 ? ? ? ? ? ? ? 'NCBI GCA_900316285.1 contig: ONCG01000034.1 start 16721 end 17623 strand +' ? 'uncultured Prevotellaceae bacterium' 370804 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 TRP 114 114 114 TRP TRP A . n A 1 115 MET 115 115 115 MET MET A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 HIS 129 129 129 HIS HIS A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 MET 131 131 131 MET MET A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 GLN 151 151 151 GLN GLN A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 ASN 178 178 178 ASN ASN A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 PHE 192 192 192 PHE PHE A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 PHE 199 199 199 PHE PHE A . n A 1 200 GLU 200 200 200 GLU GLU A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 TRP 202 202 202 TRP TRP A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 ASN 211 211 211 ASN ASN A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 CYS 213 213 213 CYS CYS A . n A 1 214 CYS 214 214 214 CYS CYS A . n A 1 215 HIS 215 215 215 HIS HIS A . n A 1 216 HIS 216 216 216 HIS HIS A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 TRP 220 220 220 TRP TRP A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 MET 229 229 229 MET MET A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 ASN 232 232 232 ASN ASN A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 MET 234 234 234 MET MET A . n A 1 235 THR 235 235 235 THR THR A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 TRP 238 238 238 TRP TRP A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 ASP 244 244 244 ASP ASP A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 ARG 247 247 247 ARG ARG A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 TYR 249 249 249 TYR TYR A . n A 1 250 PHE 250 250 250 PHE PHE A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 CYS 253 253 253 CYS CYS A . n A 1 254 ILE 254 254 254 ILE ILE A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 LYS 256 256 256 LYS LYS A . n A 1 257 TYR 257 257 257 TYR TYR A . n A 1 258 PHE 258 258 258 PHE PHE A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 ILE 262 262 262 ILE ILE A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 PRO 264 264 264 PRO PRO A . n A 1 265 GLN 265 265 265 GLN GLN A . n A 1 266 ASN 266 266 266 ASN ASN A . n A 1 267 ASP 267 267 267 ASP ASP A . n A 1 268 MET 268 268 268 MET MET A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 ILE 272 272 272 ILE ILE A . n A 1 273 ASP 273 273 273 ASP ASP A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 LEU 276 276 276 LEU LEU A . n A 1 277 SER 277 277 277 SER SER A . n A 1 278 SER 278 278 278 SER SER A . n A 1 279 TYR 279 279 279 TYR TYR A . n A 1 280 SER 280 280 280 SER SER A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 ILE 282 282 282 ILE ILE A . n A 1 283 ASP 283 283 283 ASP ASP A . n A 1 284 ILE 284 284 284 ILE ILE A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 MET 287 287 287 MET MET A . n A 1 288 GLY 288 288 288 GLY GLY A . n A 1 289 PHE 289 289 289 PHE PHE A . n A 1 290 PRO 290 290 290 PRO PRO A . n A 1 291 ARG 291 291 291 ARG ARG A . n A 1 292 GLY 292 292 292 GLY GLY A . n A 1 293 TRP 293 293 293 TRP TRP A . n A 1 294 GLU 294 294 294 GLU GLU A . n A 1 295 SER 295 295 295 SER SER A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 PRO 297 297 297 PRO PRO A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 TRP 299 299 299 TRP TRP A . n A 1 300 GLN 300 300 300 GLN GLN A . n B 2 1 A 1 1 ? ? ? R . n B 2 2 C 2 2 2 C C R . n B 2 3 U 3 3 3 U U R . n B 2 4 A 4 4 4 A A R . n B 2 5 G 5 5 5 G G R . n B 2 6 A 6 6 6 A A R . n B 2 7 A 7 7 7 A A R . n B 2 8 C 8 8 8 C C R . n B 2 9 C 9 9 9 C C R . n B 2 10 C 10 10 10 C C R . n B 2 11 G 11 11 11 G G R . n B 2 12 C 12 12 12 C C R . n B 2 13 C 13 13 13 C C R . n B 2 14 A 14 14 14 A A R . n B 2 15 A 15 15 15 A A R . n B 2 16 G 16 16 16 G G R . n B 2 17 C 17 17 17 C C R . n B 2 18 C 18 18 18 C C R . n B 2 19 U 19 19 19 U U R . n B 2 20 C 20 20 20 C C R . n B 2 21 U 21 21 21 U U R . n B 2 22 C 22 22 22 C C R . n B 2 23 A 23 23 23 A A R . n B 2 24 A 24 24 24 A A R . n B 2 25 C 25 25 25 C C R . n B 2 26 G 26 26 26 G G R . n B 2 27 A 27 27 27 A A R . n B 2 28 U 28 28 28 U U R . n B 2 29 G 29 29 29 G G R . n B 2 30 C 30 30 30 C C R . n B 2 31 U 31 31 31 U U R . n B 2 32 C 32 32 32 C C R . n B 2 33 A 33 33 33 A A R . n B 2 34 A 34 34 34 A A R . n B 2 35 A 35 35 35 A A R . n B 2 36 U 36 36 36 U U R . n B 2 37 G 37 37 37 G G R . n B 2 38 U 38 38 38 U U R . n B 2 39 G 39 39 39 G G R . n B 2 40 C 40 40 40 C C R . n B 2 41 G 41 41 41 G G R . n B 2 42 G 42 42 42 G G R . n B 2 43 G 43 43 43 G G R . n B 2 44 U 44 44 44 U U R . n B 2 45 C 45 45 45 C C R . n B 2 46 G 46 46 46 G G R . n B 2 47 U 47 47 47 U U R . n B 2 48 U 48 48 48 U U R . n B 2 49 U 49 49 49 U U R . n B 2 50 U 50 50 50 U U R . n C 1 1 MET 1 1 ? ? ? B . n C 1 2 SER 2 2 ? ? ? B . n C 1 3 ASN 3 3 ? ? ? B . n C 1 4 ARG 4 4 4 ARG ARG B . n C 1 5 ILE 5 5 5 ILE ILE B . n C 1 6 PRO 6 6 6 PRO PRO B . n C 1 7 PHE 7 7 7 PHE PHE B . n C 1 8 PRO 8 8 8 PRO PRO B . n C 1 9 LYS 9 9 9 LYS LYS B . n C 1 10 PRO 10 10 10 PRO PRO B . n C 1 11 TYR 11 11 11 TYR TYR B . n C 1 12 THR 12 12 12 THR THR B . n C 1 13 SER 13 13 13 SER SER B . n C 1 14 ALA 14 14 14 ALA ALA B . n C 1 15 HIS 15 15 15 HIS HIS B . n C 1 16 ASP 16 16 16 ASP ASP B . n C 1 17 LEU 17 17 17 LEU LEU B . n C 1 18 VAL 18 18 18 VAL VAL B . n C 1 19 SER 19 19 19 SER SER B . n C 1 20 LEU 20 20 20 LEU LEU B . n C 1 21 LEU 21 21 21 LEU LEU B . n C 1 22 GLN 22 22 22 GLN GLN B . n C 1 23 SER 23 23 23 SER SER B . n C 1 24 ARG 24 24 24 ARG ARG B . n C 1 25 GLY 25 25 25 GLY GLY B . n C 1 26 LEU 26 26 26 LEU LEU B . n C 1 27 THR 27 27 27 THR THR B . n C 1 28 ILE 28 28 28 ILE ILE B . n C 1 29 ALA 29 29 29 ALA ALA B . n C 1 30 ASP 30 30 30 ASP ASP B . n C 1 31 THR 31 31 31 THR THR B . n C 1 32 ALA 32 32 32 ALA ALA B . n C 1 33 LYS 33 33 33 LYS LYS B . n C 1 34 THR 34 34 34 THR THR B . n C 1 35 GLU 35 35 35 GLU GLU B . n C 1 36 ARG 36 36 36 ARG ARG B . n C 1 37 TYR 37 37 37 TYR TYR B . n C 1 38 LEU 38 38 38 LEU LEU B . n C 1 39 GLU 39 39 39 GLU GLU B . n C 1 40 PHE 40 40 40 PHE PHE B . n C 1 41 ILE 41 41 41 ILE ILE B . n C 1 42 GLY 42 42 42 GLY GLY B . n C 1 43 TYR 43 43 43 TYR TYR B . n C 1 44 TYR 44 44 44 TYR TYR B . n C 1 45 ARG 45 45 45 ARG ARG B . n C 1 46 LEU 46 46 46 LEU LEU B . n C 1 47 SER 47 47 47 SER SER B . n C 1 48 ALA 48 48 48 ALA ALA B . n C 1 49 TYR 49 49 49 TYR TYR B . n C 1 50 MET 50 50 50 MET MET B . n C 1 51 TYR 51 51 51 TYR TYR B . n C 1 52 PRO 52 52 52 PRO PRO B . n C 1 53 LEU 53 53 53 LEU LEU B . n C 1 54 LEU 54 54 54 LEU LEU B . n C 1 55 GLN 55 55 55 GLN GLN B . n C 1 56 MET 56 56 56 MET MET B . n C 1 57 PRO 57 57 57 PRO PRO B . n C 1 58 LYS 58 58 58 LYS LYS B . n C 1 59 GLU 59 59 59 GLU GLU B . n C 1 60 GLN 60 60 60 GLN GLN B . n C 1 61 HIS 61 61 61 HIS HIS B . n C 1 62 ARG 62 62 62 ARG ARG B . n C 1 63 TYR 63 63 63 TYR TYR B . n C 1 64 LYS 64 64 64 LYS LYS B . n C 1 65 PRO 65 65 65 PRO PRO B . n C 1 66 ASN 66 66 66 ASN ASN B . n C 1 67 THR 67 67 67 THR THR B . n C 1 68 THR 68 68 68 THR THR B . n C 1 69 PHE 69 69 69 PHE PHE B . n C 1 70 ASP 70 70 70 ASP ASP B . n C 1 71 GLN 71 71 71 GLN GLN B . n C 1 72 VAL 72 72 72 VAL VAL B . n C 1 73 MET 73 73 73 MET MET B . n C 1 74 MET 74 74 74 MET MET B . n C 1 75 LEU 75 75 75 LEU LEU B . n C 1 76 TYR 76 76 76 TYR TYR B . n C 1 77 ARG 77 77 77 ARG ARG B . n C 1 78 PHE 78 78 78 PHE PHE B . n C 1 79 ASP 79 79 79 ASP ASP B . n C 1 80 LYS 80 80 80 LYS LYS B . n C 1 81 LYS 81 81 81 LYS LYS B . n C 1 82 LEU 82 82 82 LEU LEU B . n C 1 83 ARG 83 83 83 ARG ARG B . n C 1 84 LEU 84 84 84 LEU LEU B . n C 1 85 LEU 85 85 85 LEU LEU B . n C 1 86 ILE 86 86 86 ILE ILE B . n C 1 87 PHE 87 87 87 PHE PHE B . n C 1 88 ASN 88 88 88 ASN ASN B . n C 1 89 GLU 89 89 89 GLU GLU B . n C 1 90 ILE 90 90 90 ILE ILE B . n C 1 91 GLU 91 91 91 GLU GLU B . n C 1 92 LYS 92 92 92 LYS LYS B . n C 1 93 ILE 93 93 93 ILE ILE B . n C 1 94 GLU 94 94 94 GLU GLU B . n C 1 95 VAL 95 95 95 VAL VAL B . n C 1 96 ALA 96 96 96 ALA ALA B . n C 1 97 VAL 97 97 97 VAL VAL B . n C 1 98 ARG 98 98 98 ARG ARG B . n C 1 99 SER 99 99 99 SER SER B . n C 1 100 ALA 100 100 100 ALA ALA B . n C 1 101 ILE 101 101 101 ILE ILE B . n C 1 102 VAL 102 102 102 VAL VAL B . n C 1 103 ASN 103 103 103 ASN ASN B . n C 1 104 ILE 104 104 104 ILE ILE B . n C 1 105 GLY 105 105 105 GLY GLY B . n C 1 106 SER 106 106 106 SER SER B . n C 1 107 ASP 107 107 107 ASP ASP B . n C 1 108 MET 108 108 108 MET MET B . n C 1 109 ILE 109 109 109 ILE ILE B . n C 1 110 GLY 110 110 110 GLY GLY B . n C 1 111 SER 111 111 111 SER SER B . n C 1 112 PRO 112 112 112 PRO PRO B . n C 1 113 PHE 113 113 113 PHE PHE B . n C 1 114 TRP 114 114 114 TRP TRP B . n C 1 115 MET 115 115 115 MET MET B . n C 1 116 THR 116 116 116 THR THR B . n C 1 117 ASP 117 117 117 ASP ASP B . n C 1 118 GLY 118 118 118 GLY GLY B . n C 1 119 SER 119 119 119 SER SER B . n C 1 120 ASN 120 120 120 ASN ASN B . n C 1 121 PHE 121 121 121 PHE PHE B . n C 1 122 ILE 122 122 122 ILE ILE B . n C 1 123 ASP 123 123 123 ASP ASP B . n C 1 124 PRO 124 124 124 PRO PRO B . n C 1 125 ARG 125 125 125 ARG ARG B . n C 1 126 LYS 126 126 126 LYS LYS B . n C 1 127 PHE 127 127 127 PHE PHE B . n C 1 128 ARG 128 128 128 ARG ARG B . n C 1 129 HIS 129 129 129 HIS HIS B . n C 1 130 THR 130 130 130 THR THR B . n C 1 131 MET 131 131 131 MET MET B . n C 1 132 ASP 132 132 132 ASP ASP B . n C 1 133 LEU 133 133 133 LEU LEU B . n C 1 134 ILE 134 134 134 ILE ILE B . n C 1 135 ASP 135 135 135 ASP ASP B . n C 1 136 ALA 136 136 136 ALA ALA B . n C 1 137 GLU 137 137 137 GLU GLU B . n C 1 138 LEU 138 138 138 LEU LEU B . n C 1 139 GLY 139 139 139 GLY GLY B . n C 1 140 ARG 140 140 140 ARG ARG B . n C 1 141 SER 141 141 141 SER SER B . n C 1 142 ARG 142 142 142 ARG ARG B . n C 1 143 GLU 143 143 143 GLU GLU B . n C 1 144 ASP 144 144 144 ASP ASP B . n C 1 145 PHE 145 145 145 PHE PHE B . n C 1 146 ILE 146 146 146 ILE ILE B . n C 1 147 VAL 147 147 147 VAL VAL B . n C 1 148 HIS 148 148 148 HIS HIS B . n C 1 149 PHE 149 149 149 PHE PHE B . n C 1 150 LYS 150 150 150 LYS LYS B . n C 1 151 GLN 151 151 151 GLN GLN B . n C 1 152 THR 152 152 152 THR THR B . n C 1 153 TYR 153 153 153 TYR TYR B . n C 1 154 SER 154 154 154 SER SER B . n C 1 155 ASP 155 155 155 ASP ASP B . n C 1 156 ALA 156 156 156 ALA ALA B . n C 1 157 TYR 157 157 157 TYR TYR B . n C 1 158 PRO 158 158 158 PRO PRO B . n C 1 159 PRO 159 159 159 PRO PRO B . n C 1 160 ALA 160 160 160 ALA ALA B . n C 1 161 TRP 161 161 161 TRP TRP B . n C 1 162 ILE 162 162 162 ILE ILE B . n C 1 163 LEU 163 163 163 LEU LEU B . n C 1 164 ALA 164 164 164 ALA ALA B . n C 1 165 GLU 165 165 165 GLU GLU B . n C 1 166 VAL 166 166 166 VAL VAL B . n C 1 167 LEU 167 167 167 LEU LEU B . n C 1 168 PRO 168 168 168 PRO PRO B . n C 1 169 PHE 169 169 169 PHE PHE B . n C 1 170 GLY 170 170 170 GLY GLY B . n C 1 171 VAL 171 171 171 VAL VAL B . n C 1 172 ILE 172 172 172 ILE ILE B . n C 1 173 THR 173 173 173 THR THR B . n C 1 174 ASN 174 174 174 ASN ASN B . n C 1 175 ILE 175 175 175 ILE ILE B . n C 1 176 PHE 176 176 176 PHE PHE B . n C 1 177 SER 177 177 177 SER SER B . n C 1 178 ASN 178 178 178 ASN ASN B . n C 1 179 ILE 179 179 179 ILE ILE B . n C 1 180 LYS 180 180 180 LYS LYS B . n C 1 181 THR 181 181 181 THR THR B . n C 1 182 ALA 182 182 182 ALA ALA B . n C 1 183 ARG 183 183 183 ARG ARG B . n C 1 184 ILE 184 184 184 ILE ILE B . n C 1 185 LYS 185 185 185 LYS LYS B . n C 1 186 LYS 186 186 186 LYS LYS B . n C 1 187 SER 187 187 187 SER SER B . n C 1 188 ILE 188 188 188 ILE ILE B . n C 1 189 ALA 189 189 189 ALA ALA B . n C 1 190 ARG 190 190 190 ARG ARG B . n C 1 191 LYS 191 191 191 LYS LYS B . n C 1 192 PHE 192 192 192 PHE PHE B . n C 1 193 GLY 193 193 193 GLY GLY B . n C 1 194 LEU 194 194 194 LEU LEU B . n C 1 195 GLN 195 195 195 GLN GLN B . n C 1 196 VAL 196 196 196 VAL VAL B . n C 1 197 ALA 197 197 197 ALA ALA B . n C 1 198 PRO 198 198 198 PRO PRO B . n C 1 199 PHE 199 199 199 PHE PHE B . n C 1 200 GLU 200 200 200 GLU GLU B . n C 1 201 SER 201 201 201 SER SER B . n C 1 202 TRP 202 202 202 TRP TRP B . n C 1 203 LEU 203 203 203 LEU LEU B . n C 1 204 THR 204 204 204 THR THR B . n C 1 205 ILE 205 205 205 ILE ILE B . n C 1 206 VAL 206 206 206 VAL VAL B . n C 1 207 ALA 207 207 207 ALA ALA B . n C 1 208 LEU 208 208 208 LEU LEU B . n C 1 209 THR 209 209 209 THR THR B . n C 1 210 ARG 210 210 210 ARG ARG B . n C 1 211 ASN 211 211 211 ASN ASN B . n C 1 212 SER 212 212 212 SER SER B . n C 1 213 CYS 213 213 213 CYS CYS B . n C 1 214 CYS 214 214 214 CYS CYS B . n C 1 215 HIS 215 215 215 HIS HIS B . n C 1 216 HIS 216 216 216 HIS HIS B . n C 1 217 ALA 217 217 217 ALA ALA B . n C 1 218 ARG 218 218 218 ARG ARG B . n C 1 219 VAL 219 219 219 VAL VAL B . n C 1 220 TRP 220 220 220 TRP TRP B . n C 1 221 ASN 221 221 221 ASN ASN B . n C 1 222 LYS 222 222 222 LYS LYS B . n C 1 223 GLN 223 223 223 GLN GLN B . n C 1 224 ASN 224 224 224 ASN ASN B . n C 1 225 THR 225 225 225 THR THR B . n C 1 226 ILE 226 226 226 ILE ILE B . n C 1 227 ARG 227 227 227 ARG ARG B . n C 1 228 PRO 228 228 228 PRO PRO B . n C 1 229 MET 229 229 229 MET MET B . n C 1 230 ILE 230 230 230 ILE ILE B . n C 1 231 PRO 231 231 231 PRO PRO B . n C 1 232 ASN 232 232 232 ASN ASN B . n C 1 233 ARG 233 233 233 ARG ARG B . n C 1 234 MET 234 234 234 MET MET B . n C 1 235 THR 235 235 235 THR THR B . n C 1 236 GLY 236 236 236 GLY GLY B . n C 1 237 ARG 237 237 237 ARG ARG B . n C 1 238 TRP 238 238 238 TRP TRP B . n C 1 239 ILE 239 239 239 ILE ILE B . n C 1 240 ILE 240 240 240 ILE ILE B . n C 1 241 LEU 241 241 241 LEU LEU B . n C 1 242 PRO 242 242 242 PRO PRO B . n C 1 243 THR 243 243 243 THR THR B . n C 1 244 ASP 244 244 244 ASP ASP B . n C 1 245 ALA 245 245 245 ALA ALA B . n C 1 246 LEU 246 246 246 LEU LEU B . n C 1 247 ARG 247 247 247 ARG ARG B . n C 1 248 ILE 248 248 248 ILE ILE B . n C 1 249 TYR 249 249 249 TYR TYR B . n C 1 250 PHE 250 250 250 PHE PHE B . n C 1 251 ASN 251 251 251 ASN ASN B . n C 1 252 LEU 252 252 252 LEU LEU B . n C 1 253 CYS 253 253 253 CYS CYS B . n C 1 254 ILE 254 254 254 ILE ILE B . n C 1 255 ILE 255 255 255 ILE ILE B . n C 1 256 LYS 256 256 256 LYS LYS B . n C 1 257 TYR 257 257 257 TYR TYR B . n C 1 258 PHE 258 258 258 PHE PHE B . n C 1 259 LEU 259 259 259 LEU LEU B . n C 1 260 ASP 260 260 260 ASP ASP B . n C 1 261 ILE 261 261 261 ILE ILE B . n C 1 262 ILE 262 262 262 ILE ILE B . n C 1 263 SER 263 263 263 SER SER B . n C 1 264 PRO 264 264 264 PRO PRO B . n C 1 265 GLN 265 265 265 GLN GLN B . n C 1 266 ASN 266 266 266 ASN ASN B . n C 1 267 ASP 267 267 267 ASP ASP B . n C 1 268 MET 268 268 268 MET MET B . n C 1 269 LYS 269 269 269 LYS LYS B . n C 1 270 ALA 270 270 270 ALA ALA B . n C 1 271 LYS 271 271 271 LYS LYS B . n C 1 272 ILE 272 272 272 ILE ILE B . n C 1 273 ASP 273 273 273 ASP ASP B . n C 1 274 ALA 274 274 274 ALA ALA B . n C 1 275 LEU 275 275 275 LEU LEU B . n C 1 276 LEU 276 276 276 LEU LEU B . n C 1 277 SER 277 277 277 SER SER B . n C 1 278 SER 278 278 278 SER SER B . n C 1 279 TYR 279 279 279 TYR TYR B . n C 1 280 SER 280 280 280 SER SER B . n C 1 281 SER 281 281 281 SER SER B . n C 1 282 ILE 282 282 282 ILE ILE B . n C 1 283 ASP 283 283 283 ASP ASP B . n C 1 284 ILE 284 284 284 ILE ILE B . n C 1 285 ASN 285 285 285 ASN ASN B . n C 1 286 ALA 286 286 286 ALA ALA B . n C 1 287 MET 287 287 287 MET MET B . n C 1 288 GLY 288 288 288 GLY GLY B . n C 1 289 PHE 289 289 289 PHE PHE B . n C 1 290 PRO 290 290 290 PRO PRO B . n C 1 291 ARG 291 291 291 ARG ARG B . n C 1 292 GLY 292 292 292 GLY GLY B . n C 1 293 TRP 293 293 293 TRP TRP B . n C 1 294 GLU 294 294 294 GLU GLU B . n C 1 295 SER 295 295 295 SER SER B . n C 1 296 GLU 296 296 296 GLU GLU B . n C 1 297 PRO 297 297 297 PRO PRO B . n C 1 298 LEU 298 298 298 LEU LEU B . n C 1 299 TRP 299 299 299 TRP TRP B . n C 1 300 GLN 300 300 300 GLN GLN B . n D 2 1 A 1 1 ? ? ? S . n D 2 2 C 2 2 2 C C S . n D 2 3 U 3 3 3 U U S . n D 2 4 A 4 4 4 A A S . n D 2 5 G 5 5 5 G G S . n D 2 6 A 6 6 6 A A S . n D 2 7 A 7 7 7 A A S . n D 2 8 C 8 8 8 C C S . n D 2 9 C 9 9 9 C C S . n D 2 10 C 10 10 10 C C S . n D 2 11 G 11 11 11 G G S . n D 2 12 C 12 12 12 C C S . n D 2 13 C 13 13 13 C C S . n D 2 14 A 14 14 14 A A S . n D 2 15 A 15 15 15 A A S . n D 2 16 G 16 16 16 G G S . n D 2 17 C 17 17 17 C C S . n D 2 18 C 18 18 18 C C S . n D 2 19 U 19 19 19 U U S . n D 2 20 C 20 20 20 C C S . n D 2 21 U 21 21 21 U U S . n D 2 22 C 22 22 22 C C S . n D 2 23 A 23 23 23 A A S . n D 2 24 A 24 24 24 A A S . n D 2 25 C 25 25 25 C C S . n D 2 26 G 26 26 26 G G S . n D 2 27 A 27 27 27 A A S . n D 2 28 U 28 28 28 U U S . n D 2 29 G 29 29 29 G G S . n D 2 30 C 30 30 30 C C S . n D 2 31 U 31 31 31 U U S . n D 2 32 C 32 32 32 C C S . n D 2 33 A 33 33 33 A A S . n D 2 34 A 34 34 34 A A S . n D 2 35 A 35 35 35 A A S . n D 2 36 U 36 36 36 U U S . n D 2 37 G 37 37 37 G G S . n D 2 38 U 38 38 38 U U S . n D 2 39 G 39 39 39 G G S . n D 2 40 C 40 40 40 C C S . n D 2 41 G 41 41 41 G G S . n D 2 42 G 42 42 42 G G S . n D 2 43 G 43 43 43 G G S . n D 2 44 U 44 44 44 U U S . n D 2 45 C 45 45 45 C C S . n D 2 46 G 46 46 46 G G S . n D 2 47 U 47 47 47 U U S . n D 2 48 U 48 48 48 U U S . n D 2 49 U 49 49 49 U U S . n D 2 50 U 50 50 50 U U S . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8VZ6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VZ6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8VZ6 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 ? 7326 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.142 ? 10390 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 16.610 ? 1830 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.060 ? 1230 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 954 ? f_plane_restr ? ? # _struct.entry_id 8VZ6 _struct.title 'PbAbiF dimer bound to ncRNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VZ6 _struct_keywords.text 'toxin-antitoxin, RNP, RNA-binding protein, HEPN, TOXIN, TOXIN-RNA complex' _struct_keywords.pdbx_keywords TOXIN/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8VZ6 8VZ6 ? 1 ? 1 2 PDB 8VZ6 8VZ6 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VZ6 A 1 ? 300 ? 8VZ6 1 ? 300 ? 1 300 2 2 8VZ6 R 1 ? 50 ? 8VZ6 1 ? 50 ? 1 50 3 1 8VZ6 B 1 ? 300 ? 8VZ6 1 ? 300 ? 1 300 4 2 8VZ6 S 1 ? 50 ? 8VZ6 1 ? 50 ? 1 50 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 13 ? ARG A 24 ? SER A 13 ARG A 24 1 ? 12 HELX_P HELX_P2 AA2 ASP A 30 ? ILE A 41 ? ASP A 30 ILE A 41 1 ? 12 HELX_P HELX_P3 AA3 GLY A 42 ? TYR A 51 ? GLY A 42 TYR A 51 1 ? 10 HELX_P HELX_P4 AA4 PRO A 52 ? LEU A 54 ? PRO A 52 LEU A 54 5 ? 3 HELX_P HELX_P5 AA5 PRO A 57 ? HIS A 61 ? PRO A 57 HIS A 61 5 ? 5 HELX_P HELX_P6 AA6 THR A 68 ? GLY A 110 ? THR A 68 GLY A 110 1 ? 43 HELX_P HELX_P7 AA7 PHE A 113 ? PHE A 121 ? PHE A 113 PHE A 121 5 ? 9 HELX_P HELX_P8 AA8 ASP A 123 ? GLY A 139 ? ASP A 123 GLY A 139 1 ? 17 HELX_P HELX_P9 AA9 PHE A 145 ? TYR A 153 ? PHE A 145 TYR A 153 1 ? 9 HELX_P HELX_P10 AB1 PRO A 159 ? ALA A 164 ? PRO A 159 ALA A 164 1 ? 6 HELX_P HELX_P11 AB2 PRO A 168 ? SER A 177 ? PRO A 168 SER A 177 1 ? 10 HELX_P HELX_P12 AB3 THR A 181 ? PHE A 192 ? THR A 181 PHE A 192 1 ? 12 HELX_P HELX_P13 AB4 GLN A 195 ? HIS A 215 ? GLN A 195 HIS A 215 1 ? 21 HELX_P HELX_P14 AB5 ILE A 248 ? SER A 263 ? ILE A 248 SER A 263 1 ? 16 HELX_P HELX_P15 AB6 ASP A 267 ? TYR A 279 ? ASP A 267 TYR A 279 1 ? 13 HELX_P HELX_P16 AB7 ASP A 283 ? MET A 287 ? ASP A 283 MET A 287 5 ? 5 HELX_P HELX_P17 AB8 GLY A 292 ? GLN A 300 ? GLY A 292 GLN A 300 5 ? 9 HELX_P HELX_P18 AB9 HIS C 15 ? ARG C 24 ? HIS B 15 ARG B 24 1 ? 10 HELX_P HELX_P19 AC1 ASP C 30 ? ILE C 41 ? ASP B 30 ILE B 41 1 ? 12 HELX_P HELX_P20 AC2 GLY C 42 ? TYR C 51 ? GLY B 42 TYR B 51 1 ? 10 HELX_P HELX_P21 AC3 PRO C 52 ? LEU C 54 ? PRO B 52 LEU B 54 5 ? 3 HELX_P HELX_P22 AC4 PRO C 57 ? HIS C 61 ? PRO B 57 HIS B 61 5 ? 5 HELX_P HELX_P23 AC5 THR C 68 ? GLY C 110 ? THR B 68 GLY B 110 1 ? 43 HELX_P HELX_P24 AC6 PHE C 113 ? PHE C 121 ? PHE B 113 PHE B 121 5 ? 9 HELX_P HELX_P25 AC7 ASP C 123 ? GLY C 139 ? ASP B 123 GLY B 139 1 ? 17 HELX_P HELX_P26 AC8 PHE C 145 ? TYR C 153 ? PHE B 145 TYR B 153 1 ? 9 HELX_P HELX_P27 AC9 PRO C 159 ? ALA C 164 ? PRO B 159 ALA B 164 1 ? 6 HELX_P HELX_P28 AD1 PRO C 168 ? SER C 177 ? PRO B 168 SER B 177 1 ? 10 HELX_P HELX_P29 AD2 THR C 181 ? PHE C 192 ? THR B 181 PHE B 192 1 ? 12 HELX_P HELX_P30 AD3 GLN C 195 ? HIS C 215 ? GLN B 195 HIS B 215 1 ? 21 HELX_P HELX_P31 AD4 ILE C 248 ? SER C 263 ? ILE B 248 SER B 263 1 ? 16 HELX_P HELX_P32 AD5 ASP C 267 ? TYR C 279 ? ASP B 267 TYR B 279 1 ? 13 HELX_P HELX_P33 AD6 ASP C 283 ? MET C 287 ? ASP B 283 MET B 287 5 ? 5 HELX_P HELX_P34 AD7 GLY C 292 ? GLN C 300 ? GLY B 292 GLN B 300 5 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B A 4 N3 ? ? ? 1_555 B U 47 N3 ? ? R A 4 R U 47 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog2 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 45 N3 ? ? R G 5 R C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 45 O2 ? ? R G 5 R C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 45 N4 ? ? R G 5 R C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B A 7 N1 ? ? ? 1_555 B U 44 N3 ? ? R A 7 R U 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B A 7 N6 ? ? ? 1_555 B U 44 O4 ? ? R A 7 R U 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 43 N1 ? ? R C 8 R G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 43 O6 ? ? R C 8 R G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 43 N2 ? ? R C 8 R G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 42 N1 ? ? R C 9 R G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 42 O6 ? ? R C 9 R G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 42 N2 ? ? R C 9 R G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 41 N1 ? ? R C 10 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 41 O6 ? ? R C 10 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 41 N2 ? ? R C 10 R G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 40 N3 ? ? R G 11 R C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 40 O2 ? ? R G 11 R C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 40 N4 ? ? R G 11 R C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 39 N1 ? ? R C 12 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 39 O6 ? ? R C 12 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 39 N2 ? ? R C 12 R G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 37 N1 ? ? R C 13 R G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 37 O6 ? ? R C 13 R G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 37 N2 ? ? R C 13 R G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B A 15 N1 ? ? ? 1_555 B U 31 N3 ? ? R A 15 R U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B A 15 N6 ? ? ? 1_555 B U 31 O4 ? ? R A 15 R U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 30 N3 ? ? R G 16 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 30 O2 ? ? R G 16 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 30 N4 ? ? R G 16 R C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 17 N3 ? ? ? 1_555 B G 29 N1 ? ? R C 17 R G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B C 17 N4 ? ? ? 1_555 B G 29 O6 ? ? R C 17 R G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 17 O2 ? ? ? 1_555 B G 29 N2 ? ? R C 17 R G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B C 18 N3 ? ? ? 1_555 B A 27 N6 ? ? R C 18 R A 27 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog34 hydrog ? ? B C 18 N4 ? ? ? 1_555 B A 27 N7 ? ? R C 18 R A 27 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog35 hydrog ? ? B U 19 O4 ? ? ? 1_555 B G 29 N2 ? ? R U 19 R G 29 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog36 hydrog ? ? B C 20 N4 ? ? ? 1_555 B G 29 N3 ? ? R C 20 R G 29 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog37 hydrog ? ? B U 21 N3 ? ? ? 1_555 B A 27 N1 ? ? R U 21 R A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B U 21 O4 ? ? ? 1_555 B A 27 N6 ? ? R U 21 R A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B C 22 N3 ? ? ? 1_555 B G 26 N1 ? ? R C 22 R G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B C 22 N4 ? ? ? 1_555 B G 26 O6 ? ? R C 22 R G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 22 O2 ? ? ? 1_555 B G 26 N2 ? ? R C 22 R G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 22 O2 ? ? ? 1_555 B U 28 N3 ? ? R C 22 R U 28 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog43 hydrog ? ? B G 26 N2 ? ? ? 1_555 B U 28 O4 ? ? R G 26 R U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog44 hydrog ? ? B C 30 O2 ? ? ? 1_555 B A 33 N6 ? ? R C 30 R A 33 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog45 hydrog ? ? B U 31 O2 ? ? ? 1_555 B A 34 N6 ? ? R U 31 R A 34 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog46 hydrog ? ? D A 4 N3 ? ? ? 1_555 D U 47 N3 ? ? S A 4 S U 47 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog47 hydrog ? ? D G 5 N1 ? ? ? 1_555 D C 45 N3 ? ? S G 5 S C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D G 5 N2 ? ? ? 1_555 D C 45 O2 ? ? S G 5 S C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D G 5 O6 ? ? ? 1_555 D C 45 N4 ? ? S G 5 S C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D A 7 N1 ? ? ? 1_555 D U 44 N3 ? ? S A 7 S U 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D A 7 N6 ? ? ? 1_555 D U 44 O4 ? ? S A 7 S U 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D C 8 N3 ? ? ? 1_555 D G 43 N1 ? ? S C 8 S G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D C 8 N4 ? ? ? 1_555 D G 43 O6 ? ? S C 8 S G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D C 8 O2 ? ? ? 1_555 D G 43 N2 ? ? S C 8 S G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D C 9 N3 ? ? ? 1_555 D G 42 N1 ? ? S C 9 S G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D C 9 N4 ? ? ? 1_555 D G 42 O6 ? ? S C 9 S G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D C 9 O2 ? ? ? 1_555 D G 42 N2 ? ? S C 9 S G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D C 10 N3 ? ? ? 1_555 D G 41 N1 ? ? S C 10 S G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D C 10 N4 ? ? ? 1_555 D G 41 O6 ? ? S C 10 S G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D C 10 O2 ? ? ? 1_555 D G 41 N2 ? ? S C 10 S G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D G 11 N1 ? ? ? 1_555 D C 40 N3 ? ? S G 11 S C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D G 11 N2 ? ? ? 1_555 D C 40 O2 ? ? S G 11 S C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D G 11 O6 ? ? ? 1_555 D C 40 N4 ? ? S G 11 S C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D C 12 N3 ? ? ? 1_555 D G 39 N1 ? ? S C 12 S G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D C 12 N4 ? ? ? 1_555 D G 39 O6 ? ? S C 12 S G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D C 12 O2 ? ? ? 1_555 D G 39 N2 ? ? S C 12 S G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D C 13 N3 ? ? ? 1_555 D G 37 N1 ? ? S C 13 S G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D C 13 N4 ? ? ? 1_555 D G 37 O6 ? ? S C 13 S G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D C 13 O2 ? ? ? 1_555 D G 37 N2 ? ? S C 13 S G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D A 15 N1 ? ? ? 1_555 D U 31 N3 ? ? S A 15 S U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? D A 15 N6 ? ? ? 1_555 D U 31 O4 ? ? S A 15 S U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? D G 16 N1 ? ? ? 1_555 D C 30 N3 ? ? S G 16 S C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? D G 16 N2 ? ? ? 1_555 D C 30 O2 ? ? S G 16 S C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? D G 16 O6 ? ? ? 1_555 D C 30 N4 ? ? S G 16 S C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? D C 17 N3 ? ? ? 1_555 D G 29 N1 ? ? S C 17 S G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? D C 17 N4 ? ? ? 1_555 D G 29 O6 ? ? S C 17 S G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? D C 17 O2 ? ? ? 1_555 D G 29 N2 ? ? S C 17 S G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? D C 18 N3 ? ? ? 1_555 D A 27 N6 ? ? S C 18 S A 27 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog79 hydrog ? ? D C 18 N4 ? ? ? 1_555 D A 27 N7 ? ? S C 18 S A 27 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog80 hydrog ? ? D U 19 O4 ? ? ? 1_555 D G 29 N2 ? ? S U 19 S G 29 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog81 hydrog ? ? D C 20 N4 ? ? ? 1_555 D G 29 N3 ? ? S C 20 S G 29 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog82 hydrog ? ? D U 21 N3 ? ? ? 1_555 D A 27 N1 ? ? S U 21 S A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? D U 21 O4 ? ? ? 1_555 D A 27 N6 ? ? S U 21 S A 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? D C 22 N3 ? ? ? 1_555 D G 26 N1 ? ? S C 22 S G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? D C 22 N4 ? ? ? 1_555 D G 26 O6 ? ? S C 22 S G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? D C 22 O2 ? ? ? 1_555 D G 26 N2 ? ? S C 22 S G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? D C 22 O2 ? ? ? 1_555 D U 28 N3 ? ? S C 22 S U 28 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog88 hydrog ? ? D G 26 N2 ? ? ? 1_555 D U 28 O4 ? ? S G 26 S U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog89 hydrog ? ? D C 30 O2 ? ? ? 1_555 D A 33 N6 ? ? S C 30 S A 33 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog90 hydrog ? ? D U 31 O2 ? ? ? 1_555 D A 34 N6 ? ? S U 31 S A 34 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 8VZ6 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 241 ? ? CB A LEU 241 ? ? CG A LEU 241 ? ? 130.44 115.30 15.14 2.30 N 2 1 N1 R C 20 ? ? C2 R C 20 ? ? O2 R C 20 ? ? 123.49 118.90 4.59 0.60 N 3 1 C2 R C 20 ? ? N1 R C 20 ? ? "C1'" R C 20 ? ? 126.23 118.80 7.43 1.10 N 4 1 C6 R C 25 ? ? N1 R C 25 ? ? C2 R C 25 ? ? 116.57 120.30 -3.73 0.40 N 5 1 N1 R C 25 ? ? C2 R C 25 ? ? O2 R C 25 ? ? 122.55 118.90 3.65 0.60 N 6 1 N3 R C 25 ? ? C2 R C 25 ? ? O2 R C 25 ? ? 116.87 121.90 -5.03 0.70 N 7 1 CA B LEU 241 ? ? CB B LEU 241 ? ? CG B LEU 241 ? ? 130.57 115.30 15.27 2.30 N 8 1 N1 S C 20 ? ? C2 S C 20 ? ? O2 S C 20 ? ? 123.45 118.90 4.55 0.60 N 9 1 C2 S C 20 ? ? N1 S C 20 ? ? "C1'" S C 20 ? ? 126.27 118.80 7.47 1.10 N 10 1 C6 S C 25 ? ? N1 S C 25 ? ? C2 S C 25 ? ? 116.51 120.30 -3.79 0.40 N 11 1 N1 S C 25 ? ? C2 S C 25 ? ? O2 S C 25 ? ? 122.56 118.90 3.66 0.60 N 12 1 N3 S C 25 ? ? C2 S C 25 ? ? O2 S C 25 ? ? 116.84 121.90 -5.06 0.70 N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8VZ6 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' # _em_3d_reconstruction.entry_id 8VZ6 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.56 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 12790 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '10 mM HEPES-KOH pH 7.9, 250 mM potassium acetate, 2.5 mM magnesium acetate, 5 mM beta-mercaptoethanol, 5 mM desthiobiotin' _em_buffer.pH 7.9 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'AbiF RNP' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8VZ6 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1400 _em_imaging.nominal_defocus_max 3200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 130000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 50 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type Quantifoil _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8VZ6 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 285 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8VZ6 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8VZ6 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 R A 1 ? B A 1 5 1 Y 1 B MET 1 ? C MET 1 6 1 Y 1 B SER 2 ? C SER 2 7 1 Y 1 B ASN 3 ? C ASN 3 8 1 Y 1 S A 1 ? D A 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _em_admin.current_status REL _em_admin.deposition_date 2024-02-10 _em_admin.deposition_site RCSB _em_admin.entry_id 8VZ6 _em_admin.last_update 2025-02-12 _em_admin.map_release_date 2025-02-12 _em_admin.title 'PbAbiF dimer bound to ncRNA' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.1 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 370804 _em_entity_assembly_naturalsource.organism 'uncultured Prevotellaceae bacterium' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 0.69 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 42.2 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 4272 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1142600 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? Topaz ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4.1 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ISOLDE ? 'MODEL FITTING' ? 8 ? 1 ? Coot ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? RELION 4.0 CLASSIFICATION ? 12 1 ? ? RELION 4.0 RECONSTRUCTION ? 13 1 ? ? RELION 4.0 'MODEL REFINEMENT' ? 14 ? 1 ? PHENIX ? # _em_specimen.concentration 2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8VZ6 'double helix' 8VZ6 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 4 1_555 B U 47 1_555 0.275 -3.299 -0.725 48.089 2.498 -107.107 1 R_A4:U47_R R 4 ? R 47 ? ? 6 1 B G 5 1_555 B C 45 1_555 -0.175 -0.088 -0.128 -0.887 -4.454 -2.732 2 R_G5:C45_R R 5 ? R 45 ? 19 1 1 B A 7 1_555 B U 44 1_555 1.294 0.536 -0.475 0.879 -4.453 -25.353 3 R_A7:U44_R R 7 ? R 44 ? 20 1 1 B C 8 1_555 B G 43 1_555 0.119 -0.067 -0.151 2.342 -4.115 -0.559 4 R_C8:G43_R R 8 ? R 43 ? 19 1 1 B C 9 1_555 B G 42 1_555 0.080 -0.070 0.146 -0.233 -11.032 1.200 5 R_C9:G42_R R 9 ? R 42 ? 19 1 1 B C 10 1_555 B G 41 1_555 0.138 -0.076 0.170 -2.521 -6.971 -1.229 6 R_C10:G41_R R 10 ? R 41 ? 19 1 1 B G 11 1_555 B C 40 1_555 -0.120 -0.142 -0.534 -1.103 -0.040 -2.359 7 R_G11:C40_R R 11 ? R 40 ? 19 1 1 B C 12 1_555 B G 39 1_555 0.158 -0.183 -0.571 3.938 -3.493 -0.343 8 R_C12:G39_R R 12 ? R 39 ? 19 1 1 B C 13 1_555 B G 37 1_555 0.145 -0.015 0.152 7.031 4.807 2.748 9 R_C13:G37_R R 13 ? R 37 ? 19 1 1 B A 15 1_555 B U 31 1_555 0.108 -0.223 -1.046 -14.596 -2.893 -4.663 10 R_A15:U31_R R 15 ? R 31 ? 20 1 1 B G 16 1_555 B C 30 1_555 -0.088 -0.107 0.206 -5.181 5.978 1.138 11 R_G16:C30_R R 16 ? R 30 ? 19 1 1 B C 17 1_555 B G 29 1_555 0.099 -0.132 0.130 0.612 1.887 -3.158 12 R_C17:G29_R R 17 ? R 29 ? 19 1 1 B U 21 1_555 B A 27 1_555 -0.003 -0.037 -0.484 -5.461 -15.065 -3.126 13 R_U21:A27_R R 21 ? R 27 ? 20 1 1 B C 22 1_555 B G 26 1_555 0.034 -0.102 0.418 -6.766 -8.245 -1.503 14 R_C22:G26_R R 22 ? R 26 ? 19 1 1 D A 4 1_555 D U 47 1_555 0.278 -3.293 -0.710 48.015 2.591 -107.067 15 S_A4:U47_S S 4 ? S 47 ? ? 6 1 D G 5 1_555 D C 45 1_555 -0.171 -0.095 -0.114 -0.932 -4.664 -2.705 16 S_G5:C45_S S 5 ? S 45 ? 19 1 1 D A 7 1_555 D U 44 1_555 1.309 0.537 -0.465 0.769 -4.323 -25.051 17 S_A7:U44_S S 7 ? S 44 ? 20 1 1 D C 8 1_555 D G 43 1_555 0.119 -0.068 -0.150 2.311 -4.079 -0.596 18 S_C8:G43_S S 8 ? S 43 ? 19 1 1 D C 9 1_555 D G 42 1_555 0.080 -0.069 0.143 -0.214 -11.039 1.199 19 S_C9:G42_S S 9 ? S 42 ? 19 1 1 D C 10 1_555 D G 41 1_555 0.138 -0.077 0.168 -2.490 -6.999 -1.241 20 S_C10:G41_S S 10 ? S 41 ? 19 1 1 D G 11 1_555 D C 40 1_555 -0.121 -0.142 -0.538 -1.173 -0.003 -2.303 21 S_G11:C40_S S 11 ? S 40 ? 19 1 1 D C 12 1_555 D G 39 1_555 0.158 -0.185 -0.578 3.967 -3.413 -0.398 22 S_C12:G39_S S 12 ? S 39 ? 19 1 1 D C 13 1_555 D G 37 1_555 0.145 -0.014 0.150 7.093 4.793 2.717 23 S_C13:G37_S S 13 ? S 37 ? 19 1 1 D A 15 1_555 D U 31 1_555 0.109 -0.223 -1.047 -14.628 -2.905 -4.624 24 S_A15:U31_S S 15 ? S 31 ? 20 1 1 D G 16 1_555 D C 30 1_555 -0.089 -0.107 0.206 -5.166 5.968 1.162 25 S_G16:C30_S S 16 ? S 30 ? 19 1 1 D C 17 1_555 D G 29 1_555 0.099 -0.132 0.129 0.613 1.894 -3.169 26 S_C17:G29_S S 17 ? S 29 ? 19 1 1 D U 21 1_555 D A 27 1_555 -0.002 -0.037 -0.484 -5.419 -15.088 -3.110 27 S_U21:A27_S S 21 ? S 27 ? 20 1 1 D C 22 1_555 D G 26 1_555 0.035 -0.102 0.418 -6.793 -8.263 -1.517 28 S_C22:G26_S S 22 ? S 26 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B A 4 1_555 B U 47 1_555 B G 5 1_555 B C 45 1_555 3.540 1.729 4.693 30.331 25.622 -14.457 -4.120 6.954 -1.937 -45.680 54.075 -42.155 1 RR_A4G5:C45U47_RR R 4 ? R 47 ? R 5 ? R 45 ? 1 B G 5 1_555 B C 45 1_555 B A 7 1_555 B U 44 1_555 -0.892 -1.457 3.437 -1.546 5.447 29.900 -3.887 1.386 3.169 10.440 2.962 30.420 2 RR_G5A7:U44C45_RR R 5 ? R 45 ? R 7 ? R 44 ? 1 B A 7 1_555 B U 44 1_555 B C 8 1_555 B G 43 1_555 1.241 -1.633 3.296 -2.609 4.078 28.217 -4.186 -3.075 2.911 8.288 5.303 28.621 3 RR_A7C8:G43U44_RR R 7 ? R 44 ? R 8 ? R 43 ? 1 B C 8 1_555 B G 43 1_555 B C 9 1_555 B G 42 1_555 0.004 -1.963 3.254 -3.670 10.825 31.462 -5.023 -0.553 2.448 19.187 6.505 33.425 4 RR_C8C9:G42G43_RR R 8 ? R 43 ? R 9 ? R 42 ? 1 B C 9 1_555 B G 42 1_555 B C 10 1_555 B G 41 1_555 -0.577 -1.560 3.373 -1.696 3.730 32.110 -3.464 0.733 3.201 6.709 3.050 32.364 5 RR_C9C10:G41G42_RR R 9 ? R 42 ? R 10 ? R 41 ? 1 B C 10 1_555 B G 41 1_555 B G 11 1_555 B C 40 1_555 -0.189 -1.279 3.601 0.028 -0.144 28.991 -2.519 0.384 3.607 -0.287 -0.055 28.992 6 RR_C10G11:C40G41_RR R 10 ? R 41 ? R 11 ? R 40 ? 1 B G 11 1_555 B C 40 1_555 B C 12 1_555 B G 39 1_555 0.228 -1.712 3.257 -0.621 1.380 33.609 -3.179 -0.494 3.182 2.385 1.074 33.642 7 RR_G11C12:G39C40_RR R 11 ? R 40 ? R 12 ? R 39 ? 1 B C 12 1_555 B G 39 1_555 B C 13 1_555 B G 37 1_555 0.602 -2.699 3.804 -4.258 -5.052 28.839 -3.980 -2.281 4.079 -9.979 8.410 29.570 8 RR_C12C13:G37G39_RR R 12 ? R 39 ? R 13 ? R 37 ? 1 B A 15 1_555 B U 31 1_555 B G 16 1_555 B C 30 1_555 1.526 -1.348 3.108 -8.156 23.130 19.682 -5.555 -3.904 0.589 48.871 17.233 31.352 9 RR_A15G16:C30U31_RR R 15 ? R 31 ? R 16 ? R 30 ? 1 B G 16 1_555 B C 30 1_555 B C 17 1_555 B G 29 1_555 -0.036 -1.419 3.267 2.273 7.346 35.651 -3.243 0.360 2.919 11.829 -3.660 36.445 10 RR_G16C17:G29C30_RR R 16 ? R 30 ? R 17 ? R 29 ? 1 B C 17 1_555 B G 29 1_555 B U 21 1_555 B A 27 1_555 -4.914 -0.554 3.532 13.180 0.710 107.108 -0.353 3.217 3.102 0.440 -8.173 107.668 11 RR_C17U21:A27G29_RR R 17 ? R 29 ? R 21 ? R 27 ? 1 B U 21 1_555 B A 27 1_555 B C 22 1_555 B G 26 1_555 1.060 -0.550 3.474 0.593 0.704 39.247 -0.908 -1.502 3.479 1.048 -0.883 39.257 12 RR_U21C22:G26A27_RR R 21 ? R 27 ? R 22 ? R 26 ? 1 D A 4 1_555 D U 47 1_555 D G 5 1_555 D C 45 1_555 3.545 1.731 4.694 30.205 25.400 -14.434 -4.140 7.000 -1.936 -45.501 54.109 -41.923 13 SS_A4G5:C45U47_SS S 4 ? S 47 ? S 5 ? S 45 ? 1 D G 5 1_555 D C 45 1_555 D A 7 1_555 D U 44 1_555 -0.895 -1.471 3.437 -1.488 5.614 30.080 -3.913 1.395 3.157 10.692 2.833 30.623 14 SS_G5A7:U44C45_SS S 5 ? S 45 ? S 7 ? S 44 ? 1 D A 7 1_555 D U 44 1_555 D C 8 1_555 D G 43 1_555 1.227 -1.639 3.294 -2.561 3.976 28.075 -4.204 -3.056 2.918 8.124 5.232 28.463 15 SS_A7C8:G43U44_SS S 7 ? S 44 ? S 8 ? S 43 ? 1 D C 8 1_555 D G 43 1_555 D C 9 1_555 D G 42 1_555 0.004 -1.967 3.252 -3.625 10.839 31.411 -5.040 -0.548 2.442 19.241 6.435 33.376 16 SS_C8C9:G42G43_SS S 8 ? S 43 ? S 9 ? S 42 ? 1 D C 9 1_555 D G 42 1_555 D C 10 1_555 D G 41 1_555 -0.577 -1.561 3.371 -1.700 3.748 32.109 -3.468 0.733 3.199 6.741 3.058 32.364 17 SS_C9C10:G41G42_SS S 9 ? S 42 ? S 10 ? S 41 ? 1 D C 10 1_555 D G 41 1_555 D G 11 1_555 D C 40 1_555 -0.179 -1.284 3.606 0.050 -0.214 28.972 -2.514 0.371 3.615 -0.428 -0.100 28.973 18 SS_C10G11:C40G41_SS S 10 ? S 41 ? S 11 ? S 40 ? 1 D G 11 1_555 D C 40 1_555 D C 12 1_555 D G 39 1_555 0.230 -1.705 3.255 -0.549 1.361 33.640 -3.162 -0.486 3.182 2.351 0.948 33.671 19 SS_G11C12:G39C40_SS S 11 ? S 40 ? S 12 ? S 39 ? 1 D C 12 1_555 D G 39 1_555 D C 13 1_555 D G 37 1_555 0.608 -2.688 3.804 -4.244 -5.005 28.860 -3.972 -2.287 4.073 -9.881 8.379 29.581 20 SS_C12C13:G37G39_SS S 12 ? S 39 ? S 13 ? S 37 ? 1 D A 15 1_555 D U 31 1_555 D G 16 1_555 D C 30 1_555 1.527 -1.344 3.108 -8.154 23.104 19.654 -5.556 -3.910 0.590 48.875 17.249 31.315 21 SS_A15G16:C30U31_SS S 15 ? S 31 ? S 16 ? S 30 ? 1 D G 16 1_555 D C 30 1_555 D C 17 1_555 D G 29 1_555 -0.039 -1.418 3.267 2.266 7.357 35.654 -3.242 0.362 2.919 11.845 -3.648 36.449 22 SS_G16C17:G29C30_SS S 16 ? S 30 ? S 17 ? S 29 ? 1 D C 17 1_555 D G 29 1_555 D U 21 1_555 D A 27 1_555 -4.913 -0.555 3.531 13.185 0.740 107.088 -0.353 3.217 3.100 0.459 -8.177 107.649 23 SS_C17U21:A27G29_SS S 17 ? S 29 ? S 21 ? S 27 ? 1 D U 21 1_555 D A 27 1_555 D C 22 1_555 D G 26 1_555 1.054 -0.546 3.474 0.577 0.695 39.279 -0.899 -1.494 3.479 1.034 -0.858 39.289 24 SS_U21C22:G26A27_SS S 21 ? S 27 ? S 22 ? S 26 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 1 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' R01HG009761 2 # _atom_sites.entry_id 8VZ6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ #