data_8W17 # _entry.id 8W17 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8W17 pdb_00008w17 10.2210/pdb8w17/pdb WWPDB D_1000281467 ? ? BMRB 31148 ? 10.13018/BMR31148 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-03-05 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 8W17 _pdbx_database_status.recvd_initial_deposition_date 2024-02-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Lactam bridge synthetic analogue of RgIA' _pdbx_database_related.db_id 31148 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email akello.agwa@gmail.com _pdbx_contact_author.name_first Akello _pdbx_contact_author.name_last Agwa _pdbx_contact_author.name_mi J _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9295-5071 # _audit_author.name 'Agwa, A.J.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0001-9295-5071 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'On-resin bicyclization improves synthesis of alpha-conotoxin RgIA4-6' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Giribaldi, J.' 1 0000-0002-4273-3080 primary 'Agwa, A.J.' 2 0000-0001-9295-5071 primary 'Duorado, M.' 3 ? primary 'Hackos, D.' 4 ? primary 'Schroeder, C.I.' 5 0000-0002-6737-6374 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Alpha-conotoxin RgIA analogue' _entity.formula_weight 1953.998 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Lactam bridge between GLU1 and LYS15' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'EGCCTDPRCR(IYR)QCYK' _entity_poly.pdbx_seq_one_letter_code_can EGCCTDPRCRYQCYK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 GLY n 1 3 CYS n 1 4 CYS n 1 5 THR n 1 6 ASP n 1 7 PRO n 1 8 ARG n 1 9 CYS n 1 10 ARG n 1 11 IYR n 1 12 GLN n 1 13 CYS n 1 14 TYR n 1 15 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'Conus regius' _pdbx_entity_src_syn.organism_common_name 'Crown cone' _pdbx_entity_src_syn.ncbi_taxonomy_id 101314 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 IYR 'L-peptide linking' n 3-IODO-TYROSINE ? 'C9 H10 I N O3' 307.085 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 IYR 11 11 11 IYR IYR A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LYS 15 15 15 LYS LYS A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8W17 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8W17 _struct.title 'Lactam bridge synthetic analogue of RgIA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8W17 _struct_keywords.text 'STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CA1A_CONRE _struct_ref.pdbx_db_accession P0C1D0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RGCCSDPRCRYRCR _struct_ref.pdbx_align_begin 19 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8W17 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 14 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C1D0 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 32 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 14 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8W17 GLU A 1 ? UNP P0C1D0 ARG 19 conflict 1 1 1 8W17 THR A 5 ? UNP P0C1D0 SER 23 conflict 5 2 1 8W17 GLN A 12 ? UNP P0C1D0 ARG 30 conflict 12 3 1 8W17 TYR A 14 ? UNP P0C1D0 ARG 32 conflict 14 4 1 8W17 LYS A 15 ? UNP P0C1D0 ? ? 'expression tag' 15 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 6 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 12 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 6 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 12 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 9 SG ? ? A CYS 3 A CYS 9 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 13 SG ? ? A CYS 4 A CYS 13 1_555 ? ? ? ? ? ? ? 2.101 ? ? covale1 covale none ? A GLU 1 CD ? ? ? 1_555 A LYS 15 NZ ? ? A GLU 1 A LYS 15 1_555 ? ? ? ? ? ? ? 1.802 ? ? covale2 covale both ? A ARG 10 C ? ? ? 1_555 A IYR 11 N ? ? A ARG 10 A IYR 11 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A IYR 11 C ? ? ? 1_555 A GLN 12 N ? ? A IYR 11 A GLN 12 1_555 ? ? ? ? ? ? ? 1.329 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 IYR A 11 ? . . . . IYR A 11 ? 1_555 . . . . . . . TYR 1 IYR Iodination 'Named protein modification' 2 CYS A 3 ? CYS A 9 ? CYS A 3 ? 1_555 CYS A 9 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 4 ? CYS A 13 ? CYS A 4 ? 1_555 CYS A 13 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 GLU A 1 ? LYS A 15 ? GLU A 1 ? 1_555 LYS A 15 ? 1_555 CD NZ . . . None 'Isopeptide bond' # _pdbx_entry_details.entry_id 8W17 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 CD A GLU 1 ? ? HZ1 A LYS 15 ? ? 1.32 2 3 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.57 3 5 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 2.08 4 7 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.60 5 10 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.83 6 11 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.56 7 14 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 2.18 8 16 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.50 9 17 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.47 10 18 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 2.16 11 19 CD A GLU 1 ? ? HZ1 A LYS 15 ? ? 1.52 12 19 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.53 13 20 CD A GLU 1 ? ? HZ1 A LYS 15 ? ? 1.47 14 20 OE1 A GLU 1 ? ? NZ A LYS 15 ? ? 1.77 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 14 ? ? -95.37 34.99 2 2 TYR A 14 ? ? -95.02 34.93 3 3 TYR A 14 ? ? -94.83 35.27 4 4 TYR A 14 ? ? -94.43 35.10 5 5 TYR A 14 ? ? -95.49 34.95 6 6 TYR A 14 ? ? -99.93 35.00 7 7 TYR A 14 ? ? -95.46 34.90 8 8 TYR A 14 ? ? -95.41 34.91 9 9 TYR A 14 ? ? -95.76 34.91 10 10 TYR A 14 ? ? -93.51 35.45 11 11 GLN A 12 ? ? -113.34 78.89 12 11 TYR A 14 ? ? -94.12 35.43 13 12 TYR A 14 ? ? -95.25 34.93 14 13 TYR A 14 ? ? -94.84 34.94 15 14 GLN A 12 ? ? -118.96 78.99 16 14 TYR A 14 ? ? -95.46 35.01 17 15 TYR A 14 ? ? -95.04 35.30 18 16 GLN A 12 ? ? -115.82 79.02 19 16 TYR A 14 ? ? -95.00 35.02 20 17 GLN A 12 ? ? -115.20 79.00 21 17 TYR A 14 ? ? -93.47 35.47 22 18 TYR A 14 ? ? -94.68 36.22 23 19 GLN A 12 ? ? -114.71 79.40 24 19 TYR A 14 ? ? -93.89 35.97 25 20 GLN A 12 ? ? -118.81 79.12 26 20 TYR A 14 ? ? -95.40 35.05 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id IYR _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id IYR _pdbx_struct_mod_residue.auth_seq_id 11 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_nmr_ensemble.entry_id 8W17 _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8W17 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1 mg/mL JG054, 90% H2O/10% D2O' '90% H2O/10% D2O' JG054 solution ? 2 '1 mg/mL JG054, 100% D2O' '100% D2O' JG054 solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 JG054 1 ? mg/mL 'natural abundance' 2 JG054 1 ? mg/mL 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4 _pdbx_nmr_exptl_sample_conditions.ionic_strength na _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label JG054-1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 2 anisotropic 2 1 1 '2D 1H-1H TOCSY' 1 anisotropic 3 1 1 '2D 1H-15N HSQC' 1 anisotropic 4 1 2 '2D 1H-13C HSQC' 1 anisotropic # _pdbx_nmr_refine.entry_id 8W17 _pdbx_nmr_refine.method na _pdbx_nmr_refine.details 'no refinement was performed' _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'CcpNmr Analysis' 2.5.2 CCPN 2 refinement CYANA 3.98.15 'Guntert, Mumenthaler and Wuthrich' 3 processing TopSpin 3.6.2 'Bruker Biospin' 4 'structure calculation' CYANA 3.98.15 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASP N N N N 28 ASP CA C N S 29 ASP C C N N 30 ASP O O N N 31 ASP CB C N N 32 ASP CG C N N 33 ASP OD1 O N N 34 ASP OD2 O N N 35 ASP OXT O N N 36 ASP H H N N 37 ASP H2 H N N 38 ASP HA H N N 39 ASP HB2 H N N 40 ASP HB3 H N N 41 ASP HD2 H N N 42 ASP HXT H N N 43 CYS N N N N 44 CYS CA C N R 45 CYS C C N N 46 CYS O O N N 47 CYS CB C N N 48 CYS SG S N N 49 CYS OXT O N N 50 CYS H H N N 51 CYS H2 H N N 52 CYS HA H N N 53 CYS HB2 H N N 54 CYS HB3 H N N 55 CYS HG H N N 56 CYS HXT H N N 57 GLN N N N N 58 GLN CA C N S 59 GLN C C N N 60 GLN O O N N 61 GLN CB C N N 62 GLN CG C N N 63 GLN CD C N N 64 GLN OE1 O N N 65 GLN NE2 N N N 66 GLN OXT O N N 67 GLN H H N N 68 GLN H2 H N N 69 GLN HA H N N 70 GLN HB2 H N N 71 GLN HB3 H N N 72 GLN HG2 H N N 73 GLN HG3 H N N 74 GLN HE21 H N N 75 GLN HE22 H N N 76 GLN HXT H N N 77 GLU N N N N 78 GLU CA C N S 79 GLU C C N N 80 GLU O O N N 81 GLU CB C N N 82 GLU CG C N N 83 GLU CD C N N 84 GLU OE1 O N N 85 GLU OE2 O N N 86 GLU OXT O N N 87 GLU H H N N 88 GLU H2 H N N 89 GLU HA H N N 90 GLU HB2 H N N 91 GLU HB3 H N N 92 GLU HG2 H N N 93 GLU HG3 H N N 94 GLU HE2 H N N 95 GLU HXT H N N 96 GLY N N N N 97 GLY CA C N N 98 GLY C C N N 99 GLY O O N N 100 GLY OXT O N N 101 GLY H H N N 102 GLY H2 H N N 103 GLY HA2 H N N 104 GLY HA3 H N N 105 GLY HXT H N N 106 IYR N N N N 107 IYR CA C N S 108 IYR CB C N N 109 IYR CC C Y N 110 IYR CD C Y N 111 IYR CE C Y N 112 IYR IE I N N 113 IYR CF C Y N 114 IYR OF O N N 115 IYR CG C Y N 116 IYR CH C Y N 117 IYR C C N N 118 IYR O O N N 119 IYR OXT O N N 120 IYR H H N N 121 IYR H2 H N N 122 IYR HA H N N 123 IYR HB2 H N N 124 IYR HB3 H N N 125 IYR HD H N N 126 IYR HF H N N 127 IYR HG H N N 128 IYR HH H N N 129 IYR HXT H N N 130 LYS N N N N 131 LYS CA C N S 132 LYS C C N N 133 LYS O O N N 134 LYS CB C N N 135 LYS CG C N N 136 LYS CD C N N 137 LYS CE C N N 138 LYS NZ N N N 139 LYS OXT O N N 140 LYS H H N N 141 LYS H2 H N N 142 LYS HA H N N 143 LYS HB2 H N N 144 LYS HB3 H N N 145 LYS HG2 H N N 146 LYS HG3 H N N 147 LYS HD2 H N N 148 LYS HD3 H N N 149 LYS HE2 H N N 150 LYS HE3 H N N 151 LYS HZ1 H N N 152 LYS HZ2 H N N 153 LYS HZ3 H N N 154 LYS HXT H N N 155 PRO N N N N 156 PRO CA C N S 157 PRO C C N N 158 PRO O O N N 159 PRO CB C N N 160 PRO CG C N N 161 PRO CD C N N 162 PRO OXT O N N 163 PRO H H N N 164 PRO HA H N N 165 PRO HB2 H N N 166 PRO HB3 H N N 167 PRO HG2 H N N 168 PRO HG3 H N N 169 PRO HD2 H N N 170 PRO HD3 H N N 171 PRO HXT H N N 172 SER N N N N 173 SER CA C N S 174 SER C C N N 175 SER O O N N 176 SER CB C N N 177 SER OG O N N 178 SER OXT O N N 179 SER H H N N 180 SER H2 H N N 181 SER HA H N N 182 SER HB2 H N N 183 SER HB3 H N N 184 SER HG H N N 185 SER HXT H N N 186 THR N N N N 187 THR CA C N S 188 THR C C N N 189 THR O O N N 190 THR CB C N R 191 THR OG1 O N N 192 THR CG2 C N N 193 THR OXT O N N 194 THR H H N N 195 THR H2 H N N 196 THR HA H N N 197 THR HB H N N 198 THR HG1 H N N 199 THR HG21 H N N 200 THR HG22 H N N 201 THR HG23 H N N 202 THR HXT H N N 203 TYR N N N N 204 TYR CA C N S 205 TYR C C N N 206 TYR O O N N 207 TYR CB C N N 208 TYR CG C Y N 209 TYR CD1 C Y N 210 TYR CD2 C Y N 211 TYR CE1 C Y N 212 TYR CE2 C Y N 213 TYR CZ C Y N 214 TYR OH O N N 215 TYR OXT O N N 216 TYR H H N N 217 TYR H2 H N N 218 TYR HA H N N 219 TYR HB2 H N N 220 TYR HB3 H N N 221 TYR HD1 H N N 222 TYR HD2 H N N 223 TYR HE1 H N N 224 TYR HE2 H N N 225 TYR HH H N N 226 TYR HXT H N N 227 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASP N CA sing N N 27 ASP N H sing N N 28 ASP N H2 sing N N 29 ASP CA C sing N N 30 ASP CA CB sing N N 31 ASP CA HA sing N N 32 ASP C O doub N N 33 ASP C OXT sing N N 34 ASP CB CG sing N N 35 ASP CB HB2 sing N N 36 ASP CB HB3 sing N N 37 ASP CG OD1 doub N N 38 ASP CG OD2 sing N N 39 ASP OD2 HD2 sing N N 40 ASP OXT HXT sing N N 41 CYS N CA sing N N 42 CYS N H sing N N 43 CYS N H2 sing N N 44 CYS CA C sing N N 45 CYS CA CB sing N N 46 CYS CA HA sing N N 47 CYS C O doub N N 48 CYS C OXT sing N N 49 CYS CB SG sing N N 50 CYS CB HB2 sing N N 51 CYS CB HB3 sing N N 52 CYS SG HG sing N N 53 CYS OXT HXT sing N N 54 GLN N CA sing N N 55 GLN N H sing N N 56 GLN N H2 sing N N 57 GLN CA C sing N N 58 GLN CA CB sing N N 59 GLN CA HA sing N N 60 GLN C O doub N N 61 GLN C OXT sing N N 62 GLN CB CG sing N N 63 GLN CB HB2 sing N N 64 GLN CB HB3 sing N N 65 GLN CG CD sing N N 66 GLN CG HG2 sing N N 67 GLN CG HG3 sing N N 68 GLN CD OE1 doub N N 69 GLN CD NE2 sing N N 70 GLN NE2 HE21 sing N N 71 GLN NE2 HE22 sing N N 72 GLN OXT HXT sing N N 73 GLU N CA sing N N 74 GLU N H sing N N 75 GLU N H2 sing N N 76 GLU CA C sing N N 77 GLU CA CB sing N N 78 GLU CA HA sing N N 79 GLU C O doub N N 80 GLU C OXT sing N N 81 GLU CB CG sing N N 82 GLU CB HB2 sing N N 83 GLU CB HB3 sing N N 84 GLU CG CD sing N N 85 GLU CG HG2 sing N N 86 GLU CG HG3 sing N N 87 GLU CD OE1 doub N N 88 GLU CD OE2 sing N N 89 GLU OE2 HE2 sing N N 90 GLU OXT HXT sing N N 91 GLY N CA sing N N 92 GLY N H sing N N 93 GLY N H2 sing N N 94 GLY CA C sing N N 95 GLY CA HA2 sing N N 96 GLY CA HA3 sing N N 97 GLY C O doub N N 98 GLY C OXT sing N N 99 GLY OXT HXT sing N N 100 IYR N CA sing N N 101 IYR N H sing N N 102 IYR N H2 sing N N 103 IYR CA CB sing N N 104 IYR CA C sing N N 105 IYR CA HA sing N N 106 IYR CB CC sing N N 107 IYR CB HB2 sing N N 108 IYR CB HB3 sing N N 109 IYR CC CD doub Y N 110 IYR CC CH sing Y N 111 IYR CD CE sing Y N 112 IYR CD HD sing N N 113 IYR CE IE sing N N 114 IYR CE CF doub Y N 115 IYR CF OF sing N N 116 IYR CF CG sing Y N 117 IYR OF HF sing N N 118 IYR CG CH doub Y N 119 IYR CG HG sing N N 120 IYR CH HH sing N N 121 IYR C O doub N N 122 IYR C OXT sing N N 123 IYR OXT HXT sing N N 124 LYS N CA sing N N 125 LYS N H sing N N 126 LYS N H2 sing N N 127 LYS CA C sing N N 128 LYS CA CB sing N N 129 LYS CA HA sing N N 130 LYS C O doub N N 131 LYS C OXT sing N N 132 LYS CB CG sing N N 133 LYS CB HB2 sing N N 134 LYS CB HB3 sing N N 135 LYS CG CD sing N N 136 LYS CG HG2 sing N N 137 LYS CG HG3 sing N N 138 LYS CD CE sing N N 139 LYS CD HD2 sing N N 140 LYS CD HD3 sing N N 141 LYS CE NZ sing N N 142 LYS CE HE2 sing N N 143 LYS CE HE3 sing N N 144 LYS NZ HZ1 sing N N 145 LYS NZ HZ2 sing N N 146 LYS NZ HZ3 sing N N 147 LYS OXT HXT sing N N 148 PRO N CA sing N N 149 PRO N CD sing N N 150 PRO N H sing N N 151 PRO CA C sing N N 152 PRO CA CB sing N N 153 PRO CA HA sing N N 154 PRO C O doub N N 155 PRO C OXT sing N N 156 PRO CB CG sing N N 157 PRO CB HB2 sing N N 158 PRO CB HB3 sing N N 159 PRO CG CD sing N N 160 PRO CG HG2 sing N N 161 PRO CG HG3 sing N N 162 PRO CD HD2 sing N N 163 PRO CD HD3 sing N N 164 PRO OXT HXT sing N N 165 SER N CA sing N N 166 SER N H sing N N 167 SER N H2 sing N N 168 SER CA C sing N N 169 SER CA CB sing N N 170 SER CA HA sing N N 171 SER C O doub N N 172 SER C OXT sing N N 173 SER CB OG sing N N 174 SER CB HB2 sing N N 175 SER CB HB3 sing N N 176 SER OG HG sing N N 177 SER OXT HXT sing N N 178 THR N CA sing N N 179 THR N H sing N N 180 THR N H2 sing N N 181 THR CA C sing N N 182 THR CA CB sing N N 183 THR CA HA sing N N 184 THR C O doub N N 185 THR C OXT sing N N 186 THR CB OG1 sing N N 187 THR CB CG2 sing N N 188 THR CB HB sing N N 189 THR OG1 HG1 sing N N 190 THR CG2 HG21 sing N N 191 THR CG2 HG22 sing N N 192 THR CG2 HG23 sing N N 193 THR OXT HXT sing N N 194 TYR N CA sing N N 195 TYR N H sing N N 196 TYR N H2 sing N N 197 TYR CA C sing N N 198 TYR CA CB sing N N 199 TYR CA HA sing N N 200 TYR C O doub N N 201 TYR C OXT sing N N 202 TYR CB CG sing N N 203 TYR CB HB2 sing N N 204 TYR CB HB3 sing N N 205 TYR CG CD1 doub Y N 206 TYR CG CD2 sing Y N 207 TYR CD1 CE1 sing Y N 208 TYR CD1 HD1 sing N N 209 TYR CD2 CE2 doub Y N 210 TYR CD2 HD2 sing N N 211 TYR CE1 CZ doub Y N 212 TYR CE1 HE1 sing N N 213 TYR CE2 CZ sing Y N 214 TYR CE2 HE2 sing N N 215 TYR CZ OH sing N N 216 TYR OH HH sing N N 217 TYR OXT HXT sing N N 218 # _pdbx_audit_support.funding_organization 'F. Hoffmann-La Roche LTD' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 500 ? 2 AVANCE ? Bruker 600 ? # _atom_sites.entry_id 8W17 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H I N O S # loop_ #