HEADER VIRAL PROTEIN 22-FEB-24 8W3N TITLE CRYSTAL STRUCTURE OF PREFUSION-STABILIZED RSV F PROTEIN UFCR3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREFUSION-STABILIZED RSV F PROTEIN UFCR3; COMPND 3 CHAIN: F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RESPIRATORY SYNCYTIAL VIRUS A2; SOURCE 3 ORGANISM_TAXID: 11259; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS RESPIRATORY SYNCYTIAL VIRUS, GLYCOPROTEIN, PREFUSION VACCINE, KEYWDS 2 STABILIZED, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.Z.LEE,R.L.STANFIELD,I.A.WILSON,J.ZHU REVDAT 1 15-JAN-25 8W3N 0 JRNL AUTH Y.Z.LEE,J.HAN,Y.N.ZHANG,G.WARD,K.BRAZ GOMES,S.AUCLAIR, JRNL AUTH 2 R.L.STANFIELD,L.HE,I.A.WILSON,J.ZHU JRNL TITL RATIONAL DESIGN OF UNCLEAVED PREFUSION-CLOSED TRIMER JRNL TITL 2 VACCINES FOR HUMAN RESPIRATORY SYNCYTIAL VIRUS AND JRNL TITL 3 METAPNEUMOVIRUS. JRNL REF NAT COMMUN V. 15 9939 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39550381 JRNL DOI 10.1038/S41467-024-54287-X REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 23001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0300 - 5.3800 0.99 2993 131 0.1889 0.2367 REMARK 3 2 5.3800 - 4.2700 0.99 2791 147 0.1696 0.1990 REMARK 3 3 4.2700 - 3.7300 1.00 2744 138 0.2035 0.2520 REMARK 3 4 3.7300 - 3.3900 0.98 2699 147 0.2128 0.2693 REMARK 3 5 3.3900 - 3.1500 1.00 2724 143 0.2388 0.2843 REMARK 3 6 3.1500 - 2.9600 1.00 2710 135 0.2419 0.3160 REMARK 3 7 2.9600 - 2.8100 1.00 2687 148 0.2599 0.3037 REMARK 3 8 2.8100 - 2.6900 0.94 2524 140 0.3239 0.3639 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.395 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.966 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3531 REMARK 3 ANGLE : 1.142 4788 REMARK 3 CHIRALITY : 0.060 579 REMARK 3 PLANARITY : 0.007 604 REMARK 3 DIHEDRAL : 16.185 1317 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8W3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000280349. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23015 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 45.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M DI-SODIUM TARTRATE, 18% PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.24400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 84.24400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.24400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 84.24400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 84.24400 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 84.24400 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 84.24400 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 84.24400 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 84.24400 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 84.24400 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 84.24400 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 84.24400 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 84.24400 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 126.36600 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 42.12200 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 126.36600 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 126.36600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 126.36600 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 42.12200 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 126.36600 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 42.12200 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 126.36600 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 42.12200 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 126.36600 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 42.12200 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 42.12200 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 126.36600 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 42.12200 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 126.36600 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 126.36600 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 126.36600 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 42.12200 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 126.36600 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 126.36600 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 42.12200 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 42.12200 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 42.12200 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 126.36600 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 42.12200 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 126.36600 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 42.12200 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 126.36600 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 126.36600 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 126.36600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 168.48800 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 168.48800 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 -336.97600 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -168.48800 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 336.97600 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 -168.48800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F -3 REMARK 465 GLY F -2 REMARK 465 ILE F -1 REMARK 465 LEU F 0 REMARK 465 PRO F 1 REMARK 465 SER F 2 REMARK 465 PRO F 3 REMARK 465 GLY F 4 REMARK 465 MET F 5 REMARK 465 PRO F 6 REMARK 465 ALA F 7 REMARK 465 LEU F 8 REMARK 465 LEU F 9 REMARK 465 SER F 10 REMARK 465 LEU F 11 REMARK 465 VAL F 12 REMARK 465 SER F 13 REMARK 465 LEU F 14 REMARK 465 LEU F 15 REMARK 465 SER F 16 REMARK 465 VAL F 17 REMARK 465 LEU F 18 REMARK 465 LEU F 19 REMARK 465 MET F 20 REMARK 465 GLY F 21 REMARK 465 CYS F 22 REMARK 465 VAL F 23 REMARK 465 ALA F 24 REMARK 465 GLU F 25 REMARK 465 ASP F 510 REMARK 465 GLU F 511 REMARK 465 LEU F 512 REMARK 465 LEU F 513 REMARK 465 ALA F 514 REMARK 465 SER F 515 REMARK 465 GLY F 516 REMARK 465 TYR F 517 REMARK 465 ILE F 518 REMARK 465 PRO F 519 REMARK 465 GLU F 520 REMARK 465 ALA F 521 REMARK 465 PRO F 522 REMARK 465 ARG F 523 REMARK 465 ASP F 524 REMARK 465 GLY F 525 REMARK 465 GLN F 526 REMARK 465 ALA F 527 REMARK 465 TYR F 528 REMARK 465 VAL F 529 REMARK 465 ARG F 530 REMARK 465 LYS F 531 REMARK 465 ASP F 532 REMARK 465 GLY F 533 REMARK 465 GLU F 534 REMARK 465 TRP F 535 REMARK 465 VAL F 536 REMARK 465 LEU F 537 REMARK 465 LEU F 538 REMARK 465 SER F 539 REMARK 465 THR F 540 REMARK 465 PHE F 541 REMARK 465 LEU F 542 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN F 63 35.87 -84.47 REMARK 500 ALA F 102 58.00 -158.45 REMARK 500 ASN F 208 71.64 -105.78 REMARK 500 LEU F 252 110.44 -168.51 REMARK 500 CYS F 290 -76.23 -98.79 REMARK 500 SER F 348 -164.39 -114.51 REMARK 500 SER F 362 -102.66 58.48 REMARK 500 ASN F 371 69.32 -113.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 8W3N F -3 542 PDB 8W3N 8W3N -3 542 SEQRES 1 F 511 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 F 511 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 F 511 VAL ALA GLU GLN ASN ILE THR GLU GLU PHE TYR GLN SER SEQRES 4 F 511 THR CYS SER ALA VAL SER LYS GLY TYR LEU SER ALA LEU SEQRES 5 F 511 ARG THR GLY TRP TYR THR SER VAL ILE THR ILE GLU LEU SEQRES 6 F 511 SER ASN ILE LYS GLU ASN LYS CYS ASN GLY THR ASP ALA SEQRES 7 F 511 LYS VAL LYS LEU ILE LYS GLN GLU LEU ASP LYS TYR LYS SEQRES 8 F 511 ASN ALA VAL THR GLU LEU GLN LEU LEU MET GLN SER THR SEQRES 9 F 511 PRO ALA THR GLY SER GLY SER GLY SER GLY SER ALA ILE SEQRES 10 F 511 ALA SER GLY VAL ALA VAL CYS LYS VAL LEU HIS LEU GLU SEQRES 11 F 511 GLY GLU VAL ASN LYS ILE LYS SER ALA LEU LEU SER THR SEQRES 12 F 511 ASN LYS CYS VAL VAL SER LEU SER ASN GLY VAL SER VAL SEQRES 13 F 511 LEU CYS SER LYS VAL LEU ASP LEU LYS ASN TYR ILE ASP SEQRES 14 F 511 LYS GLN LEU LEU PRO ILE VAL ASN LYS GLN SER CYS SER SEQRES 15 F 511 ILE PRO ASN ILE GLU THR VAL ILE GLU PHE GLN GLN LYS SEQRES 16 F 511 ASN ASN ARG LEU LEU GLU ILE THR ARG GLU PHE SER VAL SEQRES 17 F 511 ASN ALA GLY VAL THR THR PRO VAL SER THR TYR MET LEU SEQRES 18 F 511 THR ASN SER GLU LEU LEU SER LEU ILE ASN ASP MET PRO SEQRES 19 F 511 ILE THR ASN ASP GLN LYS LYS LEU MET SER ASN ASN VAL SEQRES 20 F 511 GLN ILE VAL ARG GLN GLN SER TYR SER ILE MET CYS ILE SEQRES 21 F 511 ILE LYS GLU GLU VAL LEU ALA TYR VAL VAL GLN LEU PRO SEQRES 22 F 511 LEU TYR GLY VAL ILE ASP THR PRO CYS TRP LYS LEU HIS SEQRES 23 F 511 THR SER PRO LEU CYS THR THR ASN THR LYS GLU GLY SER SEQRES 24 F 511 ASN ILE CYS LEU THR ARG THR ASP ARG GLY TRP TYR CYS SEQRES 25 F 511 ASP ASN ALA GLY SER VAL SER PHE PHE PRO GLN ALA GLU SEQRES 26 F 511 THR CYS LYS VAL GLN SER ASN ARG VAL PHE CYS ASP THR SEQRES 27 F 511 MET ASN SER LEU THR LEU PRO SER GLU VAL ASN LEU CYS SEQRES 28 F 511 ASN VAL ASP ILE PHE ASN PRO LYS TYR ASP CYS LYS ILE SEQRES 29 F 511 MET THR SER LYS THR ASP VAL SER SER SER VAL ILE THR SEQRES 30 F 511 SER LEU GLY ALA ILE VAL SER CYS TYR GLY LYS THR LYS SEQRES 31 F 511 CYS THR ALA SER ASN LYS ASN ARG GLY ILE ILE LYS THR SEQRES 32 F 511 PHE SER ASN GLY CYS ASP TYR VAL SER ASN LYS GLY VAL SEQRES 33 F 511 ASP THR VAL SER VAL GLY ASN THR LEU TYR TYR VAL ASN SEQRES 34 F 511 LYS GLN GLU GLY LYS SER LEU TYR VAL LYS GLY GLU PRO SEQRES 35 F 511 ILE ILE ASN PHE TYR ASP PRO LEU VAL PHE PRO SER ASP SEQRES 36 F 511 GLU PHE ASP ALA SER ILE SER GLN VAL ASN GLU LYS ILE SEQRES 37 F 511 ASN GLN SER LEU ALA PHE ILE ARG LYS SER ASP GLU LEU SEQRES 38 F 511 LEU ALA SER GLY TYR ILE PRO GLU ALA PRO ARG ASP GLY SEQRES 39 F 511 GLN ALA TYR VAL ARG LYS ASP GLY GLU TRP VAL LEU LEU SEQRES 40 F 511 SER THR PHE LEU HET NAG F 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 HOH *54(H2 O) HELIX 1 AA1 ASP F 73 SER F 99 1 27 HELIX 2 AA2 ILE F 148 HIS F 159 1 12 HELIX 3 AA3 GLY F 162 LEU F 171 1 10 HELIX 4 AA4 LEU F 195 LEU F 203 1 9 HELIX 5 AA5 LEU F 203 ASN F 208 1 6 HELIX 6 AA6 ASN F 216 ASN F 240 1 25 HELIX 7 AA7 THR F 253 ASP F 263 1 11 HELIX 8 AA8 THR F 267 ASN F 276 1 10 HELIX 9 AA9 ASN F 277 GLN F 284 1 8 HELIX 10 AB1 GLN F 354 GLU F 356 5 3 HELIX 11 AB2 MET F 370 SER F 372 5 3 HELIX 12 AB3 PRO F 376 VAL F 384 5 9 HELIX 13 AB4 PRO F 473 TYR F 478 5 6 HELIX 14 AB5 ASP F 479 PHE F 483 5 5 HELIX 15 AB6 ILE F 492 LEU F 503 1 12 SHEET 1 AA1 7 CYS F 358 GLN F 361 0 SHEET 2 AA1 7 ARG F 364 ASP F 368 -1 O PHE F 366 N LYS F 359 SHEET 3 AA1 7 SER F 38 ARG F 49 1 N ARG F 49 O CYS F 367 SHEET 4 AA1 7 VAL F 308 THR F 318 -1 O HIS F 317 N ALA F 39 SHEET 5 AA1 7 GLY F 340 ASN F 345 -1 O GLY F 340 N LEU F 316 SHEET 6 AA1 7 SER F 348 PHE F 352 -1 O SER F 350 N CYS F 343 SHEET 7 AA1 7 LEU F 373 LEU F 375 -1 O LEU F 373 N PHE F 351 SHEET 1 AA2 5 CYS F 358 GLN F 361 0 SHEET 2 AA2 5 ARG F 364 ASP F 368 -1 O PHE F 366 N LYS F 359 SHEET 3 AA2 5 SER F 38 ARG F 49 1 N ARG F 49 O CYS F 367 SHEET 4 AA2 5 THR F 29 TYR F 33 -1 N TYR F 33 O SER F 38 SHEET 5 AA2 5 LYS F 465 VAL F 469 1 O LEU F 467 N PHE F 32 SHEET 1 AA3 6 LYS F 176 SER F 180 0 SHEET 2 AA3 6 SER F 186 ASP F 194 -1 O VAL F 187 N VAL F 179 SHEET 3 AA3 6 GLY F 51 GLU F 60 1 N THR F 58 O SER F 190 SHEET 4 AA3 6 VAL F 296 LEU F 305 -1 O TYR F 299 N ILE F 57 SHEET 5 AA3 6 TYR F 286 ILE F 292 -1 N ILE F 288 O VAL F 300 SHEET 6 AA3 6 VAL F 243 THR F 244 -1 N THR F 244 O SER F 287 SHEET 1 AA4 4 LEU F 321 CYS F 322 0 SHEET 2 AA4 4 CYS F 333 ARG F 336 -1 O LEU F 334 N LEU F 321 SHEET 3 AA4 4 LYS F 394 SER F 398 -1 O MET F 396 N THR F 335 SHEET 4 AA4 4 ALA F 490 SER F 491 -1 O ALA F 490 N ILE F 395 SHEET 1 AA5 3 SER F 404 ILE F 407 0 SHEET 2 AA5 3 GLY F 411 CYS F 416 -1 O SER F 415 N SER F 404 SHEET 3 AA5 3 GLY F 438 SER F 443 -1 O ASP F 440 N VAL F 414 SHEET 1 AA6 4 GLY F 430 THR F 434 0 SHEET 2 AA6 4 CYS F 422 ASN F 426 -1 N ALA F 424 O ILE F 432 SHEET 3 AA6 4 THR F 449 VAL F 452 -1 O THR F 449 N SER F 425 SHEET 4 AA6 4 THR F 455 TYR F 458 -1 O TYR F 457 N VAL F 450 SSBOND 1 CYS F 37 CYS F 439 1555 1555 2.04 SSBOND 2 CYS F 69 CYS F 212 1555 1555 2.05 SSBOND 3 CYS F 155 CYS F 290 1555 1555 2.05 SSBOND 4 CYS F 177 CYS F 189 1555 1555 2.05 SSBOND 5 CYS F 313 CYS F 343 1555 1555 2.06 SSBOND 6 CYS F 322 CYS F 333 1555 1555 2.02 SSBOND 7 CYS F 358 CYS F 367 1555 1555 2.08 SSBOND 8 CYS F 382 CYS F 393 1555 1555 2.05 SSBOND 9 CYS F 416 CYS F 422 1555 1555 2.11 LINK ND2 ASN F 500 C1 NAG F 601 1555 1555 1.46 CISPEP 1 THR F 245 PRO F 246 0 -6.89 CRYST1 168.488 168.488 168.488 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005935 0.00000 CONECT 101 2908 CONECT 348 1141 CONECT 708 1761 CONECT 876 956 CONECT 956 876 CONECT 1141 348 CONECT 1761 708 CONECT 1941 2183 CONECT 2016 2095 CONECT 2095 2016 CONECT 2183 1941 CONECT 2292 2374 CONECT 2374 2292 CONECT 2485 2577 CONECT 2577 2485 CONECT 2736 2783 CONECT 2783 2736 CONECT 2908 101 CONECT 3392 3467 CONECT 3467 3392 3468 3478 CONECT 3468 3467 3469 3475 CONECT 3469 3468 3470 3476 CONECT 3470 3469 3471 3477 CONECT 3471 3470 3472 3478 CONECT 3472 3471 3479 CONECT 3473 3474 3475 3480 CONECT 3474 3473 CONECT 3475 3468 3473 CONECT 3476 3469 CONECT 3477 3470 CONECT 3478 3467 3471 CONECT 3479 3472 CONECT 3480 3473 MASTER 379 0 1 15 29 0 0 6 3522 1 33 40 END