HEADER HYDROLASE 24-AUG-23 8W4N TITLE CRYSTAL STRUCTURE OF ENDOSZ MUTANT D234M, IN SPACE GROUP P21, IN TITLE 2 COMPLEX WITH OLIGOSACCHARIDE G2S1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSIDE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS EQUI SUBSP. ZOOEPIDEMICUS SZ105; SOURCE 3 ORGANISM_TAXID: 1381089; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS N-LINKED GLYCAN, GLYCOSIDE HYDROLASE, TRANSGLYCOSYLATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.H.GUAN,C.C.LIN,Y.C.HSIEH,C.J.CHEN REVDAT 2 10-JUL-24 8W4N 1 JRNL REVDAT 1 03-JUL-24 8W4N 0 JRNL AUTH Y.C.HSIEH,H.H.GUAN,C.C.LIN,T.Y.HUANG,P.CHUANKHAYAN,N.C.CHEN, JRNL AUTH 2 N.H.WANG,P.L.HU,Y.C.TSAI,Y.C.HUANG,M.YOSHIMURA,P.J.LIN, JRNL AUTH 3 Y.H.HSIEH,C.J.CHEN JRNL TITL STRUCTURE-BASED HIGH-EFFICIENCY HOMOGENEOUS ANTIBODY JRNL TITL 2 PLATFORM BY ENDOGLYCOSIDASE SZ PROVIDES INSIGHTS INTO ITS JRNL TITL 3 TRANSGLYCOSYLATION MECHANISM. JRNL REF JACS AU V. 4 2130 2024 JRNL REFN ESSN 2691-3704 JRNL PMID 38938812 JRNL DOI 10.1021/JACSAU.4C00004 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 24061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.3300 - 7.4300 0.98 1610 144 0.1714 0.1890 REMARK 3 2 7.4300 - 5.9200 0.99 1608 142 0.2055 0.2444 REMARK 3 3 5.9100 - 5.1700 0.99 1562 143 0.2061 0.2493 REMARK 3 4 5.1700 - 4.7000 0.99 1600 146 0.1948 0.2382 REMARK 3 5 4.7000 - 4.3700 0.98 1577 145 0.1934 0.2569 REMARK 3 6 4.3700 - 4.1100 0.99 1580 141 0.2111 0.2574 REMARK 3 7 4.1100 - 3.9000 0.98 1564 142 0.2377 0.2823 REMARK 3 8 3.9000 - 3.7300 0.98 1563 144 0.2504 0.2675 REMARK 3 9 3.7300 - 3.5900 0.97 1559 134 0.2611 0.3105 REMARK 3 10 3.5900 - 3.4700 0.98 1564 142 0.2875 0.3839 REMARK 3 11 3.4700 - 3.3600 0.99 1567 143 0.2950 0.3417 REMARK 3 12 3.3600 - 3.2600 0.99 1568 144 0.2948 0.3874 REMARK 3 13 3.2600 - 3.1800 0.99 1585 136 0.3303 0.4044 REMARK 3 14 3.1800 - 3.1000 0.98 1567 141 0.3401 0.3980 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7167 REMARK 3 ANGLE : 0.673 9683 REMARK 3 CHIRALITY : 0.055 1102 REMARK 3 PLANARITY : 0.003 1232 REMARK 3 DIHEDRAL : 7.857 1001 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8W4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300040296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24061 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 MM SODIUM CITRATE PH 5.4 AND 2.2 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.84600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 VAL A 21 REMARK 465 ALA A 22 REMARK 465 ILE A 23 REMARK 465 LEU A 24 REMARK 465 ALA A 25 REMARK 465 ALA A 26 REMARK 465 GLN A 27 REMARK 465 HIS A 28 REMARK 465 ASP A 29 REMARK 465 SER A 30 REMARK 465 LEU A 31 REMARK 465 ILE A 32 REMARK 465 ARG A 33 REMARK 465 VAL A 34 REMARK 465 LYS A 35 REMARK 465 ALA A 36 REMARK 465 GLU A 37 REMARK 465 ASP A 38 REMARK 465 LYS A 39 REMARK 465 LEU A 40 REMARK 465 VAL A 41 REMARK 465 GLN A 42 REMARK 465 THR A 43 REMARK 465 SER A 44 REMARK 465 PRO A 45 REMARK 465 SER A 46 REMARK 465 VAL A 47 REMARK 465 SER A 48 REMARK 465 ALA A 49 REMARK 465 ILE A 50 REMARK 465 ASP A 51 REMARK 465 ALA A 52 REMARK 465 LEU A 53 REMARK 465 HIS A 54 REMARK 465 TYR A 55 REMARK 465 LEU A 56 REMARK 465 SER A 57 REMARK 465 GLU A 58 REMARK 465 ASN A 59 REMARK 465 SER A 60 REMARK 465 LYS A 61 REMARK 465 LYS A 62 REMARK 465 GLU A 63 REMARK 465 PHE A 64 REMARK 465 LYS A 65 REMARK 465 GLU A 66 REMARK 465 GLU A 67 REMARK 465 LEU A 68 REMARK 465 SER A 69 REMARK 465 LYS A 70 REMARK 465 VAL A 71 REMARK 465 GLU A 72 REMARK 465 LYS A 73 REMARK 465 ALA A 74 REMARK 465 GLN A 75 REMARK 465 PRO A 76 REMARK 465 GLU A 77 REMARK 465 LYS A 78 REMARK 465 LEU A 79 REMARK 465 LYS A 80 REMARK 465 GLU A 81 REMARK 465 ILE A 82 REMARK 465 VAL A 83 REMARK 465 SER A 84 REMARK 465 LYS A 85 REMARK 465 ALA A 86 REMARK 465 GLN A 87 REMARK 465 GLN A 88 REMARK 465 ALA A 89 REMARK 465 ASP A 90 REMARK 465 LYS A 91 REMARK 465 GLN A 92 REMARK 465 ALA A 93 REMARK 465 LYS A 94 REMARK 465 THR A 95 REMARK 465 LEU A 96 REMARK 465 ALA A 97 REMARK 465 GLU A 98 REMARK 465 LEU A 975 REMARK 465 LEU A 976 REMARK 465 ALA A 977 REMARK 465 ASP A 978 REMARK 465 ALA A 979 REMARK 465 ALA A 980 REMARK 465 GLY A 981 REMARK 465 LYS A 982 REMARK 465 LYS A 983 REMARK 465 THR A 984 REMARK 465 LEU A 985 REMARK 465 GLY A 986 REMARK 465 LYS A 987 REMARK 465 ALA A 988 REMARK 465 THR A 989 REMARK 465 LYS A 990 REMARK 465 GLU A 991 REMARK 465 ALA A 992 REMARK 465 GLN A 993 REMARK 465 PRO A 994 REMARK 465 VAL A 995 REMARK 465 ALA A 996 REMARK 465 THR A 997 REMARK 465 ASP A 998 REMARK 465 ALA A 999 REMARK 465 LYS A 1000 REMARK 465 GLU A 1001 REMARK 465 LYS A 1002 REMARK 465 ALA A 1003 REMARK 465 GLU A 1004 REMARK 465 SER A 1005 REMARK 465 GLU A 1006 REMARK 465 ASN A 1007 REMARK 465 PRO A 1008 REMARK 465 LYS A 1009 REMARK 465 ALA A 1010 REMARK 465 ASP A 1011 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 223 -62.46 -109.97 REMARK 500 LYS A 245 -1.57 68.31 REMARK 500 ASP A 449 -169.53 -127.59 REMARK 500 ASP A 540 -165.77 -79.69 REMARK 500 ALA A 599 -133.01 41.48 REMARK 500 ARG A 604 -33.54 99.28 REMARK 500 THR A 613 2.86 -67.14 REMARK 500 PHE A 627 24.86 -140.23 REMARK 500 ASN A 667 2.45 -68.99 REMARK 500 GLU A 683 58.43 -92.29 REMARK 500 ASN A 789 54.68 36.79 REMARK 500 ASN A 790 98.95 67.01 REMARK 500 ASP A 791 75.85 -57.37 REMARK 500 THR A 794 -167.01 -127.95 REMARK 500 SER A 796 -61.92 -95.73 REMARK 500 ASN A 799 -42.67 -131.82 REMARK 500 LYS A 823 15.16 51.46 REMARK 500 HIS A 841 -95.31 52.78 REMARK 500 LEU A 842 131.21 -176.06 REMARK 500 ASP A 844 -132.35 45.06 REMARK 500 TYR A 894 67.80 -101.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 782 O REMARK 620 2 ASP A 785 OD1 64.9 REMARK 620 3 ASN A 790 OD1 78.7 110.0 REMARK 620 4 PRO A 900 O 70.3 134.0 69.2 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8W4K RELATED DB: PDB DBREF 8W4N A 20 1011 PDB 8W4N 8W4N 20 1011 SEQRES 1 A 992 MET VAL ALA ILE LEU ALA ALA GLN HIS ASP SER LEU ILE SEQRES 2 A 992 ARG VAL LYS ALA GLU ASP LYS LEU VAL GLN THR SER PRO SEQRES 3 A 992 SER VAL SER ALA ILE ASP ALA LEU HIS TYR LEU SER GLU SEQRES 4 A 992 ASN SER LYS LYS GLU PHE LYS GLU GLU LEU SER LYS VAL SEQRES 5 A 992 GLU LYS ALA GLN PRO GLU LYS LEU LYS GLU ILE VAL SER SEQRES 6 A 992 LYS ALA GLN GLN ALA ASP LYS GLN ALA LYS THR LEU ALA SEQRES 7 A 992 GLU MET LYS VAL PRO GLU LYS ILE PRO MET LYS PRO LEU SEQRES 8 A 992 LYS GLY PRO LEU TYR GLY GLY TYR PHE ARG THR TRP HIS SEQRES 9 A 992 ASP LYS THR SER ASP PRO ALA GLU LYS ASP LYS VAL ASN SEQRES 10 A 992 SER MET GLY GLU LEU PRO LYS GLU VAL ASP LEU ALA PHE SEQRES 11 A 992 VAL PHE HIS ASP TRP THR LYS ASP TYR SER LEU PHE TRP SEQRES 12 A 992 GLN GLU LEU ALA THR LYS HIS VAL PRO THR LEU ASN LYS SEQRES 13 A 992 GLN GLY THR ARG VAL ILE ARG THR ILE PRO TRP ARG PHE SEQRES 14 A 992 LEU ALA GLY GLY ASP HIS SER GLY ILE ALA GLU ASP ALA SEQRES 15 A 992 GLN LYS TYR PRO ASN THR PRO GLU GLY ASN LYS ALA LEU SEQRES 16 A 992 ALA LYS ALA ILE VAL ASP GLU TYR VAL TYR LYS TYR ASN SEQRES 17 A 992 LEU ASP GLY LEU ASP VAL MET ILE GLU ARG ASP SER ILE SEQRES 18 A 992 PRO LYS VAL ASN LYS GLU GLU SER LYS GLU GLY ILE GLU SEQRES 19 A 992 ARG SER ILE GLN VAL PHE GLU GLU ILE GLY LYS LEU ILE SEQRES 20 A 992 GLY PRO LYS GLY ALA ASP LYS SER ARG LEU PHE ILE MET SEQRES 21 A 992 ASP SER THR TYR MET ALA ASP LYS ASN PRO LEU ILE GLU SEQRES 22 A 992 ARG GLY ALA PRO TYR ILE ASP LEU LEU LEU VAL GLN VAL SEQRES 23 A 992 TYR GLY THR GLN GLY GLU LYS GLY GLY PHE ASP ASN ALA SEQRES 24 A 992 ASN HIS LYS ALA VAL ASP THR MET GLU GLU ARG TRP GLU SEQRES 25 A 992 SER TYR SER LYS TYR ILE ARG PRO GLU GLN TYR MET VAL SEQRES 26 A 992 GLY PHE SER PHE TYR GLU GLU LYS ALA ASN SER GLY ASN SEQRES 27 A 992 LEU TRP TYR ASP VAL ASN VAL GLU ASP ASP THR ASN PRO SEQRES 28 A 992 ASN ILE GLY SER GLU ILE LYS GLY THR ARG ALA GLU ARG SEQRES 29 A 992 TYR ALA LYS TRP GLN PRO LYS THR GLY GLY VAL LYS GLY SEQRES 30 A 992 GLY ILE PHE SER TYR GLY ILE ASP ARG ASP GLY VAL ALA SEQRES 31 A 992 HIS PRO LYS LYS ASN GLY PRO LYS THR PRO ASP LEU ASP SEQRES 32 A 992 LYS ILE VAL LYS SER ASP TYR LYS VAL SER LYS ALA LEU SEQRES 33 A 992 LYS LYS VAL MET GLU ASN ASP LYS SER TYR GLU LEU ILE SEQRES 34 A 992 ASP GLN LYS ASP PHE PRO ASP LYS ALA LEU ARG GLU ALA SEQRES 35 A 992 VAL ILE ALA GLN VAL GLY SER ARG ARG GLY ASN LEU GLU SEQRES 36 A 992 ARG PHE ASN GLY THR LEU ARG LEU ASP ASN PRO ASP ILE SEQRES 37 A 992 LYS SER LEU GLU GLY LEU ASN LYS LEU LYS LYS LEU ALA SEQRES 38 A 992 LYS LEU GLU LEU ILE GLY LEU SER GLN ILE THR LYS LEU SEQRES 39 A 992 ASP SER SER VAL LEU PRO GLU ASN ILE LYS PRO THR LYS SEQRES 40 A 992 ASP THR LEU VAL SER VAL LEU GLU THR TYR LYS ASN ASP SEQRES 41 A 992 ASP ARG LYS GLU GLU ALA LYS ALA ILE PRO GLN VAL ALA SEQRES 42 A 992 LEU THR ILE SER GLY LEU THR GLY LEU LYS GLU LEU ASN SEQRES 43 A 992 LEU ALA GLY PHE ASP ARG ASP SER LEU ALA GLY ILE ASP SEQRES 44 A 992 ALA ALA SER LEU THR SER LEU GLU LYS VAL ASP LEU SER SEQRES 45 A 992 SER ASN LYS LEU ASP LEU ALA ALA GLY THR GLU ASN ARG SEQRES 46 A 992 GLN ILE LEU ASP THR MET LEU ALA THR VAL THR LYS HIS SEQRES 47 A 992 GLY GLY VAL SER GLU LYS THR PHE VAL PHE ASP HIS GLN SEQRES 48 A 992 LYS PRO THR GLY LEU TYR PRO ASP THR TYR GLY THR LYS SEQRES 49 A 992 SER LEU GLN LEU PRO VAL ALA ASN ASP THR ILE ASP LEU SEQRES 50 A 992 GLN ALA LYS LEU LEU PHE GLY THR VAL THR ASN GLN GLY SEQRES 51 A 992 THR LEU ILE ASN SER GLU ALA ASP TYR LYS ALA TYR GLN SEQRES 52 A 992 GLU GLN GLU ILE ALA GLY HIS ARG PHE VAL ASP SER SER SEQRES 53 A 992 TYR ASP TYR LYS ALA PHE ALA VAL THR TYR LYS ASP TYR SEQRES 54 A 992 LYS ILE LYS VAL THR ASP SER THR LEU GLY VAL THR ASP SEQRES 55 A 992 HIS LYS ASP LEU SER THR SER LYS GLU GLU THR TYR LYS SEQRES 56 A 992 VAL GLU PHE PHE SER PRO ILE ASN SER THR LYS PRO VAL SEQRES 57 A 992 HIS GLU ALA LYS ILE VAL VAL GLY GLU GLU LYS THR MET SEQRES 58 A 992 MET VAL ASN LEU ALA GLU GLY ALA THR ILE ILE GLY GLY SEQRES 59 A 992 ASP ALA ASP PRO THR ASN ALA LYS LYS VAL PHE ASP GLY SEQRES 60 A 992 LEU LEU ASN ASN ASP THR THR THR LEU SER THR SER ASN SEQRES 61 A 992 LYS ALA SER ILE ILE PHE GLU LEU LYS GLU PRO GLY LEU SEQRES 62 A 992 VAL LYS HIS TRP ARG PHE PHE ASN ASP SER LYS ILE SER SEQRES 63 A 992 LYS ALA ASP TYR ILE LYS GLU ALA LYS LEU GLU ALA PHE SEQRES 64 A 992 VAL GLY HIS LEU GLU ASP SER SER LYS VAL LYS ASP SER SEQRES 65 A 992 LEU GLU LYS SER THR GLU TRP VAL THR VAL SER ASP TYR SEQRES 66 A 992 SER GLY GLU ALA GLN GLU PHE SER GLN PRO LEU ASN ASN SEQRES 67 A 992 ILE GLY ALA LYS TYR TRP ARG ILE THR ILE ASP ASN LYS SEQRES 68 A 992 LYS SER GLN TYR GLY TYR VAL SER LEU PRO GLU LEU GLN SEQRES 69 A 992 ILE ILE GLY HIS ARG LEU PRO GLU ALA ALA THR VAL MET SEQRES 70 A 992 THR THR MET ALA ALA ALA GLU GLU LEU SER GLN GLN LYS SEQRES 71 A 992 ASP LYS PHE SER GLN GLU GLN LEU LYS GLU LEU GLU VAL SEQRES 72 A 992 LYS VAL ALA ALA LEU LYS ALA ALA LEU ASP ASN LYS MET SEQRES 73 A 992 PHE ASN ALA ASP THR ILE ASN ALA SER PHE ALA ASP VAL SEQRES 74 A 992 LYS ALA TYR ILE ASP LYS LEU LEU ALA ASP ALA ALA GLY SEQRES 75 A 992 LYS LYS THR LEU GLY LYS ALA THR LYS GLU ALA GLN PRO SEQRES 76 A 992 VAL ALA THR ASP ALA LYS GLU LYS ALA GLU SER GLU ASN SEQRES 77 A 992 PRO LYS ALA ASP HET NAG B 1 15 HET BMA B 2 11 HET MAN B 3 11 HET NAG B 4 14 HET GAL B 5 11 HET SIA B 6 20 HET MAN B 7 11 HET NAG B 8 14 HET GAL B 9 11 HET CA A1101 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN 2(C6 H12 O6) FORMUL 2 GAL 2(C6 H12 O6) FORMUL 2 SIA C11 H19 N O9 FORMUL 3 CA CA 2+ HELIX 1 AA1 TRP A 122 ASP A 124 5 3 HELIX 2 AA2 SER A 137 LEU A 141 5 5 HELIX 3 AA3 SER A 159 LYS A 168 1 10 HELIX 4 AA4 LYS A 168 GLN A 176 1 9 HELIX 5 AA5 ARG A 187 ALA A 190 5 4 HELIX 6 AA6 SER A 195 ASP A 200 5 6 HELIX 7 AA7 THR A 207 VAL A 223 1 17 HELIX 8 AA8 GLU A 236 ILE A 240 5 5 HELIX 9 AA9 SER A 248 LYS A 264 1 17 HELIX 10 AB1 MET A 284 ASN A 288 5 5 HELIX 11 AB2 LEU A 290 ALA A 295 1 6 HELIX 12 AB3 PRO A 296 ILE A 298 5 3 HELIX 13 AB4 TYR A 306 GLY A 313 1 8 HELIX 14 AB5 THR A 325 SER A 334 1 10 HELIX 15 AB6 ARG A 338 GLU A 340 5 3 HELIX 16 AB7 ASN A 371 GLU A 375 5 5 HELIX 17 AB8 THR A 379 TRP A 387 1 9 HELIX 18 AB9 ILE A 403 ASP A 406 5 4 HELIX 19 AC1 PRO A 419 LYS A 423 5 5 HELIX 20 AC2 TYR A 429 ASN A 441 1 13 HELIX 21 AC3 ASP A 442 GLU A 446 5 5 HELIX 22 AC4 ASP A 455 VAL A 466 1 12 HELIX 23 AC5 ARG A 469 GLU A 474 1 6 HELIX 24 AC6 GLY A 492 LEU A 496 5 5 HELIX 25 AC7 ASP A 514 LEU A 518 5 5 HELIX 26 AC8 PRO A 519 LYS A 523 5 5 HELIX 27 AC9 ASP A 578 LEU A 582 5 5 HELIX 28 AD1 THR A 601 THR A 613 1 13 HELIX 29 AD2 LEU A 656 LEU A 661 1 6 HELIX 30 AD3 SER A 674 GLU A 683 1 10 HELIX 31 AD4 ASP A 697 ALA A 702 1 6 HELIX 32 AD5 ASP A 776 LYS A 781 1 6 HELIX 33 AD6 LYS A 782 PHE A 784 5 3 HELIX 34 AD7 LYS A 849 LYS A 854 1 6 HELIX 35 AD8 GLU A 911 GLU A 924 1 14 HELIX 36 AD9 LEU A 937 ASN A 953 1 17 HELIX 37 AE1 ASN A 957 LYS A 974 1 18 SHEET 1 AA1 9 LEU A 114 ARG A 120 0 SHEET 2 AA1 9 LEU A 147 PHE A 151 1 O PHE A 149 N PHE A 119 SHEET 3 AA1 9 ARG A 179 PRO A 185 1 O ILE A 181 N VAL A 150 SHEET 4 AA1 9 GLY A 230 ILE A 235 1 O ASP A 232 N ILE A 184 SHEET 5 AA1 9 LEU A 276 SER A 281 1 O ASP A 280 N ILE A 235 SHEET 6 AA1 9 LEU A 300 VAL A 303 1 O LEU A 302 N SER A 281 SHEET 7 AA1 9 TYR A 342 SER A 347 1 O MET A 343 N LEU A 301 SHEET 8 AA1 9 GLY A 397 TYR A 401 1 O PHE A 399 N VAL A 344 SHEET 9 AA1 9 LEU A 114 ARG A 120 1 N TYR A 118 O SER A 400 SHEET 1 AA2 2 LYS A 242 VAL A 243 0 SHEET 2 AA2 2 GLU A 246 GLU A 247 -1 O GLU A 246 N VAL A 243 SHEET 1 AA3 2 GLY A 314 ASP A 316 0 SHEET 2 AA3 2 LYS A 321 VAL A 323 -1 O VAL A 323 N GLY A 314 SHEET 1 AA4 3 THR A 479 LEU A 482 0 SHEET 2 AA4 3 LYS A 501 ILE A 505 1 O GLU A 503 N LEU A 482 SHEET 3 AA4 3 ALA A 552 SER A 556 1 O ALA A 552 N LEU A 502 SHEET 1 AA5 4 LYS A 512 LEU A 513 0 SHEET 2 AA5 4 GLU A 563 ASN A 565 1 O ASN A 565 N LEU A 513 SHEET 3 AA5 4 LYS A 587 ASP A 589 1 O ASP A 589 N LEU A 564 SHEET 4 AA5 4 PHE A 625 VAL A 626 1 O VAL A 626 N VAL A 588 SHEET 1 AA6 2 THR A 525 LYS A 526 0 SHEET 2 AA6 2 ALA A 547 ILE A 548 -1 O ILE A 548 N THR A 525 SHEET 1 AA7 3 GLY A 634 LEU A 635 0 SHEET 2 AA7 3 THR A 664 THR A 666 -1 O VAL A 665 N LEU A 635 SHEET 3 AA7 3 LEU A 671 ILE A 672 -1 O ILE A 672 N THR A 664 SHEET 1 AA8 5 SER A 644 LEU A 647 0 SHEET 2 AA8 5 HIS A 748 VAL A 754 1 O VAL A 753 N LEU A 647 SHEET 3 AA8 5 GLU A 731 PHE A 738 -1 N TYR A 733 O ILE A 752 SHEET 4 AA8 5 LYS A 709 ASP A 714 -1 N THR A 713 O LYS A 734 SHEET 5 AA8 5 VAL A 719 THR A 720 -1 O THR A 720 N VAL A 712 SHEET 1 AA9 2 THR A 653 ASP A 655 0 SHEET 2 AA9 2 ASP A 724 SER A 726 -1 O LEU A 725 N ILE A 654 SHEET 1 AB1 4 VAL A 762 ASN A 763 0 SHEET 2 AB1 4 LEU A 902 HIS A 907 -1 O GLY A 906 N VAL A 762 SHEET 3 AB1 4 LEU A 812 PHE A 819 -1 N ARG A 817 O GLN A 903 SHEET 4 AB1 4 GLU A 870 ILE A 878 -1 O LEU A 875 N LYS A 814 SHEET 1 AB2 5 THR A 769 GLY A 773 0 SHEET 2 AB2 5 LYS A 800 GLU A 806 -1 O ILE A 804 N GLY A 772 SHEET 3 AB2 5 TYR A 882 ASP A 888 -1 O ILE A 885 N ILE A 803 SHEET 4 AB2 5 GLU A 832 PHE A 838 -1 N GLU A 836 O ARG A 884 SHEET 5 AB2 5 TRP A 858 SER A 865 -1 O VAL A 859 N ALA A 837 LINK O4 NAG B 1 C1 BMA B 2 1555 1555 1.44 LINK O3 BMA B 2 C1 MAN B 3 1555 1555 1.44 LINK O6 BMA B 2 C1 MAN B 7 1555 1555 1.44 LINK O2 MAN B 3 C1 NAG B 4 1555 1555 1.45 LINK O4 NAG B 4 C1 GAL B 5 1555 1555 1.45 LINK O6 GAL B 5 C2 SIA B 6 1555 1555 1.50 LINK O2 MAN B 7 C1 NAG B 8 1555 1555 1.44 LINK O4 NAG B 8 C1 GAL B 9 1555 1555 1.44 LINK O LYS A 782 CA CA A1101 1555 1555 2.58 LINK OD1 ASP A 785 CA CA A1101 1555 1555 2.71 LINK OD1 ASN A 790 CA CA A1101 1555 1555 2.64 LINK O PRO A 900 CA CA A1101 1555 1555 2.73 CISPEP 1 GLY A 112 PRO A 113 0 -5.19 CRYST1 51.589 101.692 129.802 90.00 90.72 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019384 0.000000 0.000244 0.00000 SCALE2 0.000000 0.009834 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007705 0.00000