HEADER OXIDOREDUCTASE 30-AUG-23 8W6X TITLE NEUTRON STRUCTURE OF [NIFE]-HYDROGENASE FROM D. VULGARIS MIYAZAKI F IN TITLE 2 ITS OXIDIZED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT; COMPND 3 CHAIN: L; COMPND 4 SYNONYM: NIFE HYDROGENLYASE LARGE CHAIN; COMPND 5 EC: 1.12.2.1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT; COMPND 8 CHAIN: S; COMPND 9 SYNONYM: NIFE HYDROGENLYASE SMALL CHAIN; COMPND 10 EC: 1.12.2.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS STR. 'MIYAZAKI F'; SOURCE 3 ORGANISM_TAXID: 883; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS STR. 'MIYAZAKI F'; SOURCE 6 ORGANISM_TAXID: 883 KEYWDS HYDROGENASE, NIFE COMPLEX, FES CLUSTER, OXIDIZED STATE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION; NEUTRON DIFFRACTION AUTHOR T.HIROMOTO,T.TAMADA REVDAT 3 15-NOV-23 8W6X 1 REMARK REVDAT 2 04-OCT-23 8W6X 1 JRNL REVDAT 1 13-SEP-23 8W6X 0 SPRSDE 13-SEP-23 8W6X 7YW6 JRNL AUTH T.HIROMOTO,K.NISHIKAWA,S.INOUE,H.OGATA,Y.HORI,K.KUSAKA, JRNL AUTH 2 Y.HIRANO,K.KURIHARA,Y.SHIGETA,T.TAMADA,Y.HIGUCHI JRNL TITL NEW INSIGHTS INTO THE OXIDATION PROCESS FROM NEUTRON AND JRNL TITL 2 X-RAY CRYSTAL STRUCTURES OF AN O 2 -SENSITIVE JRNL TITL 3 [NIFE]-HYDROGENASE. JRNL REF CHEM SCI V. 14 9306 2023 JRNL REFN ISSN 2041-6520 JRNL PMID 37712026 JRNL DOI 10.1039/D3SC02156D REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 X-RAY DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 397425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.147 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 19868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.6900 - 3.2300 1.00 13261 698 0.1330 0.1330 REMARK 3 2 3.2298 - 2.5637 1.00 12843 676 0.1097 0.1084 REMARK 3 3 2.5637 - 2.2397 1.00 12772 672 0.1073 0.1104 REMARK 3 4 2.2397 - 2.0349 1.00 12745 672 0.1143 0.1239 REMARK 3 5 2.0349 - 1.8890 1.00 12656 666 0.1257 0.1290 REMARK 3 6 1.8890 - 1.7777 1.00 12695 668 0.1270 0.1333 REMARK 3 7 1.7777 - 1.6886 1.00 12629 665 0.1310 0.1301 REMARK 3 8 1.6886 - 1.6151 1.00 12628 665 0.1356 0.1380 REMARK 3 9 1.6151 - 1.5529 1.00 12592 663 0.1396 0.1489 REMARK 3 10 1.5529 - 1.4994 1.00 12600 663 0.1429 0.1530 REMARK 3 11 1.4994 - 1.4525 1.00 12592 662 0.1514 0.1676 REMARK 3 12 1.4525 - 1.4109 1.00 12578 663 0.1590 0.1639 REMARK 3 13 1.4109 - 1.3738 1.00 12577 660 0.1650 0.1717 REMARK 3 14 1.3738 - 1.3403 1.00 12527 660 0.1716 0.1753 REMARK 3 15 1.3403 - 1.3098 1.00 12558 659 0.1720 0.1743 REMARK 3 16 1.3098 - 1.2819 1.00 12532 659 0.1757 0.1953 REMARK 3 17 1.2819 - 1.2563 1.00 12547 660 0.1791 0.1904 REMARK 3 18 1.2563 - 1.2326 1.00 12549 661 0.1833 0.1822 REMARK 3 19 1.2326 - 1.2106 1.00 12536 659 0.1878 0.2010 REMARK 3 20 1.2106 - 1.1900 1.00 12504 657 0.1907 0.1933 REMARK 3 21 1.1900 - 1.1708 1.00 12549 661 0.1890 0.1898 REMARK 3 22 1.1708 - 1.1528 1.00 12504 658 0.1942 0.1992 REMARK 3 23 1.1528 - 1.1359 1.00 12521 659 0.1995 0.2189 REMARK 3 24 1.1359 - 1.1199 1.00 12496 657 0.1981 0.2023 REMARK 3 25 1.1199 - 1.1047 1.00 12488 658 0.2041 0.2198 REMARK 3 26 1.1047 - 1.0904 1.00 12499 657 0.2101 0.2264 REMARK 3 27 1.0904 - 1.0768 1.00 12483 657 0.2177 0.2400 REMARK 3 28 1.0768 - 1.0638 1.00 12481 657 0.2328 0.2237 REMARK 3 29 1.0638 - 1.0514 1.00 12486 658 0.2392 0.2518 REMARK 3 30 1.0500 - 1.0400 0.97 12129 638 0.2515 0.2690 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.080 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 16618 REMARK 3 ANGLE : 1.213 28273 REMARK 3 CHIRALITY : 0.095 1054 REMARK 3 PLANARITY : 0.008 3027 REMARK 3 DIHEDRAL : 18.819 4252 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 3 NEUTRON DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 38312 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.9400 - 5.2600 0.71 2208 113 0.2139 0.2278 REMARK 3 2 5.2600 - 4.1926 0.83 2458 135 0.1531 0.1542 REMARK 3 3 4.1926 - 3.6678 0.88 2594 134 0.1335 0.1538 REMARK 3 4 3.6678 - 3.3348 0.92 2680 138 0.1427 0.1627 REMARK 3 5 3.3348 - 3.0970 0.89 2611 129 0.1588 0.1894 REMARK 3 6 3.0970 - 2.9153 0.89 2574 131 0.1724 0.2112 REMARK 3 7 2.9153 - 2.7698 0.91 2634 136 0.1887 0.2193 REMARK 3 8 2.7698 - 2.6496 0.91 2656 143 0.2041 0.2204 REMARK 3 9 2.6496 - 2.5479 0.94 2702 141 0.2126 0.2712 REMARK 3 10 2.5479 - 2.4602 0.93 2697 143 0.2165 0.2689 REMARK 3 11 2.4602 - 2.3835 0.93 2654 138 0.2161 0.2630 REMARK 3 12 2.3835 - 2.3155 0.92 2690 137 0.2224 0.2520 REMARK 3 13 2.3155 - 2.2547 0.93 2701 142 0.2480 0.3132 REMARK 3 14 2.2500 - 2.2000 0.89 2560 133 0.2488 0.2928 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.080 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 16618 REMARK 3 ANGLE : 1.213 28273 REMARK 3 CHIRALITY : 0.095 1054 REMARK 3 PLANARITY : 0.008 3027 REMARK 3 DIHEDRAL : 18.819 4252 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8W6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300040655. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 397623 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.040 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.46100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4U9H REMARK 200 REMARK 200 REMARK: NULL REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 21-MAR-15 REMARK 230 TEMPERATURE (KELVIN) : 100.0 REMARK 230 PH : 7.00 REMARK 230 NUMBER OF CRYSTALS USED : NULL REMARK 230 REMARK 230 NEUTRON SOURCE : SPALLATION SOURCE REMARK 230 BEAMLINE : BL-03 REMARK 230 WAVELENGTH OR RANGE (A) : 1.8-5.8 REMARK 230 MONOCHROMATOR : NULL REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : DIFFRACTOMETER REMARK 230 DETECTOR MANUFACTURER : IBIX REMARK 230 INTENSITY-INTEGRATION SOFTWARE : STARGAZER REMARK 230 DATA SCALING SOFTWARE : SCALA REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 38335 REMARK 230 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 230 RESOLUTION RANGE LOW (A) : 20.000 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 230 DATA REDUNDANCY : 2.600 REMARK 230 R MERGE (I) : 0.22000 REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : 4.9000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 230 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 230 DATA REDUNDANCY IN SHELL : 2.80 REMARK 230 R MERGE FOR SHELL (I) : 0.39400 REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : 2.300 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 230 SOFTWARE USED : PHASER REMARK 230 STARTING MODEL: 4U9H REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30%(V/V) 2-METHYL-2,4-PENTANE-D12 REMARK 280 -DIOL, 10 MM GLUCOSE-D12, 25 MM TRIS-D11-DCL IN D2O, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.35250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.24250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.35250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.24250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -142.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU L 34 CD GLU L 34 OE2 0.083 REMARK 500 HIS S 196 C PHE S 197 N 0.240 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG L 430 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG S 5 NE - CZ - NH2 ANGL. DEV. = -7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR L 86 -42.64 69.27 REMARK 500 ALA L 231 -50.43 88.46 REMARK 500 HIS L 235 85.63 70.91 REMARK 500 GLN L 237 67.29 -152.61 REMARK 500 PHE L 238 -4.10 -141.23 REMARK 500 VAL L 272 -61.84 -122.23 REMARK 500 PHE L 302 70.69 75.90 REMARK 500 ASP L 363 172.67 69.79 REMARK 500 TYR L 370 16.96 -150.40 REMARK 500 ASN S 14 -125.05 -99.22 REMARK 500 HIS S 45 104.39 -167.16 REMARK 500 LYS S 235 -178.97 59.32 REMARK 500 LYS S 235 -176.40 58.16 REMARK 500 THR S 239 -21.80 -153.52 REMARK 500 THR S 239 -22.61 -151.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH L1242 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH L1243 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH L1244 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH L1245 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH L1246 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH L1247 DISTANCE = 7.94 ANGSTROMS REMARK 525 HOH L1248 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH S1391 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH S1392 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH S1393 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH S1394 DISTANCE = 6.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFU L 601 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU L 34 OE2 REMARK 620 2 NFU L 601 FE 137.3 REMARK 620 3 CSO L 546 SG 82.2 57.2 REMARK 620 4 CYS L 549 N 98.9 123.4 170.3 REMARK 620 5 CYS L 549 SG 167.1 35.7 87.0 90.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG L 609 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU L 62 OE2 REMARK 620 2 LEU L 498 O 96.7 REMARK 620 3 HIS L 552 NE2 88.6 89.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFU L 601 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L 81 SG REMARK 620 2 NFU L 601 FE 146.5 REMARK 620 3 CYS L 84 SG 103.2 48.8 REMARK 620 4 CYS L 546 SG 85.2 119.3 166.3 REMARK 620 5 CYS L 549 SG 108.3 49.8 69.3 97.9 REMARK 620 6 OH L 608 O 163.5 45.7 80.4 94.7 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFU L 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L 84 SG REMARK 620 2 NFU L 601 NI 60.3 REMARK 620 3 NFU L 601 C1 171.4 111.1 REMARK 620 4 NFU L 601 C2 94.2 118.5 90.3 REMARK 620 5 NFU L 601 C3 94.4 143.3 93.1 87.3 REMARK 620 6 CSO L 546 OD 74.5 34.3 98.4 87.8 167.5 REMARK 620 7 CYS L 549 SG 80.1 58.0 95.2 174.3 93.9 89.9 REMARK 620 8 CYS L 549 SG 102.9 64.9 71.7 160.9 99.6 88.6 24.1 REMARK 620 9 OH L 608 O 83.4 36.7 89.3 90.7 176.9 9.6 87.8 83.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 17 SG REMARK 620 2 SF4 S1001 S2 102.9 REMARK 620 3 SF4 S1001 S3 121.5 105.3 REMARK 620 4 SF4 S1001 S4 116.1 105.7 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 20 SG REMARK 620 2 SF4 S1001 S1 105.8 REMARK 620 3 SF4 S1001 S2 120.1 102.6 REMARK 620 4 SF4 S1001 S3 117.1 103.6 105.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 114 SG REMARK 620 2 SF4 S1001 S1 111.1 REMARK 620 3 SF4 S1001 S3 130.1 102.5 REMARK 620 4 SF4 S1001 S4 99.0 108.6 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1001 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 150 SG REMARK 620 2 SF4 S1001 S1 112.2 REMARK 620 3 SF4 S1001 S2 125.9 101.5 REMARK 620 4 SF4 S1001 S4 104.6 107.5 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1002 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS S 188 ND1 REMARK 620 2 SF4 S1002 S2 105.9 REMARK 620 3 SF4 S1002 S3 115.9 104.8 REMARK 620 4 SF4 S1002 S4 121.0 104.9 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1002 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 191 SG REMARK 620 2 SF4 S1002 S1 122.2 REMARK 620 3 SF4 S1002 S2 113.7 103.3 REMARK 620 4 SF4 S1002 S4 105.4 104.8 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1002 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 216 SG REMARK 620 2 SF4 S1002 S1 121.3 REMARK 620 3 SF4 S1002 S2 120.0 102.1 REMARK 620 4 SF4 S1002 S3 101.8 104.2 105.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 S1002 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 222 SG REMARK 620 2 SF4 S1002 S1 118.8 REMARK 620 3 SF4 S1002 S3 113.2 104.3 REMARK 620 4 SF4 S1002 S4 111.6 104.0 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1003 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 231 SG REMARK 620 2 F3S S1003 S1 117.9 REMARK 620 3 F3S S1003 S3 110.9 102.7 REMARK 620 4 F3S S1003 S4 108.8 112.3 103.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1003 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 249 SG REMARK 620 2 F3S S1003 S1 115.1 REMARK 620 3 F3S S1003 S2 111.2 112.2 REMARK 620 4 F3S S1003 S3 110.7 103.2 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S S1003 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS S 252 SG REMARK 620 2 F3S S1003 S2 110.6 REMARK 620 3 F3S S1003 S3 116.8 103.3 REMARK 620 4 F3S S1003 S4 106.1 115.5 104.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7YW6 RELATED DB: PDB DBREF 8W6X L 20 552 UNP P21852 PHNL_DESVM 20 552 DBREF 8W6X S 2 267 UNP P21853 PHNS_DESVM 52 317 SEQRES 1 L 533 SER TYR SER GLY PRO ILE VAL VAL ASP PRO VAL THR ARG SEQRES 2 L 533 ILE GLU GLY HIS LEU ARG ILE GLU VAL GLU VAL GLU ASN SEQRES 3 L 533 GLY LYS VAL LYS ASN ALA TYR SER SER SER THR LEU PHE SEQRES 4 L 533 ARG GLY LEU GLU ILE ILE LEU LYS GLY ARG ASP PRO ARG SEQRES 5 L 533 ASP ALA GLN HIS PHE THR GLN ARG THR CYS GLY VAL CYS SEQRES 6 L 533 THR TYR THR HIS ALA LEU ALA SER THR ARG CYS VAL ASP SEQRES 7 L 533 ASN ALA VAL GLY VAL HIS ILE PRO LYS ASN ALA THR TYR SEQRES 8 L 533 ILE ARG ASN LEU VAL LEU GLY ALA GLN TYR LEU HIS ASP SEQRES 9 L 533 HIS ILE VAL HIS PHE TYR HIS LEU HIS ALA LEU ASP PHE SEQRES 10 L 533 VAL ASP VAL THR ALA ALA LEU LYS ALA ASP PRO ALA LYS SEQRES 11 L 533 ALA ALA LYS VAL ALA SER SER ILE SER PRO ARG LYS THR SEQRES 12 L 533 THR ALA ALA ASP LEU LYS ALA VAL GLN ASP LYS LEU LYS SEQRES 13 L 533 THR PHE VAL GLU SER GLY GLN LEU GLY PRO PHE THR ASN SEQRES 14 L 533 ALA TYR PHE LEU GLY GLY HIS PRO ALA TYR TYR LEU ASP SEQRES 15 L 533 PRO GLU THR ASN LEU ILE ALA THR ALA HIS TYR LEU GLU SEQRES 16 L 533 ALA LEU ARG LEU GLN VAL LYS ALA ALA ARG ALA MET ALA SEQRES 17 L 533 VAL PHE GLY ALA LYS ASN PRO HIS THR GLN PHE THR VAL SEQRES 18 L 533 VAL GLY GLY VAL THR CYS TYR ASP ALA LEU THR PRO GLN SEQRES 19 L 533 ARG ILE ALA GLU PHE GLU ALA LEU TRP LYS GLU THR LYS SEQRES 20 L 533 ALA PHE VAL ASP GLU VAL TYR ILE PRO ASP LEU LEU VAL SEQRES 21 L 533 VAL ALA ALA ALA TYR LYS ASP TRP THR GLN TYR GLY GLY SEQRES 22 L 533 THR ASP ASN PHE ILE THR PHE GLY GLU PHE PRO LYS ASP SEQRES 23 L 533 GLU TYR ASP LEU ASN SER ARG PHE PHE LYS PRO GLY VAL SEQRES 24 L 533 VAL PHE LYS ARG ASP PHE LYS ASN ILE LYS PRO PHE ASP SEQRES 25 L 533 LYS MET GLN ILE GLU GLU HIS VAL ARG HIS SER TRP TYR SEQRES 26 L 533 GLU GLY ALA GLU ALA ARG HIS PRO TRP LYS GLY GLN THR SEQRES 27 L 533 GLN PRO LYS TYR THR ASP LEU HIS GLY ASP ASP ARG TYR SEQRES 28 L 533 SER TRP MET LYS ALA PRO ARG TYR MET GLY GLU PRO MET SEQRES 29 L 533 GLU THR GLY PRO LEU ALA GLN VAL LEU ILE ALA TYR SER SEQRES 30 L 533 GLN GLY HIS PRO LYS VAL LYS ALA VAL THR ASP ALA VAL SEQRES 31 L 533 LEU ALA LYS LEU GLY VAL GLY PRO GLU ALA LEU PHE SER SEQRES 32 L 533 THR LEU GLY ARG THR ALA ALA ARG GLY ILE GLU THR ALA SEQRES 33 L 533 VAL ILE ALA GLU TYR VAL GLY VAL MET LEU GLN GLU TYR SEQRES 34 L 533 LYS ASP ASN ILE ALA LYS GLY ASP ASN VAL ILE CYS ALA SEQRES 35 L 533 PRO TRP GLU MET PRO LYS GLN ALA GLU GLY VAL GLY PHE SEQRES 36 L 533 VAL ASN ALA PRO ARG GLY GLY LEU SER HIS TRP ILE ARG SEQRES 37 L 533 ILE GLU ASP GLY LYS ILE GLY ASN PHE GLN LEU VAL VAL SEQRES 38 L 533 PRO SER THR TRP THR LEU GLY PRO ARG CYS ASP LYS ASN SEQRES 39 L 533 LYS LEU SER PRO VAL GLU ALA SER LEU ILE GLY THR PRO SEQRES 40 L 533 VAL ALA ASP ALA LYS ARG PRO VAL GLU ILE LEU ARG THR SEQRES 41 L 533 VAL HIS SER PHE ASP PRO CSO ILE ALA CYS GLY VAL HIS SEQRES 1 S 266 MET GLY PRO ARG ARG PRO SER VAL VAL TYR LEU HIS ASN SEQRES 2 S 266 ALA GLU CYS THR GLY CYS SER GLU SER VAL LEU ARG ALA SEQRES 3 S 266 PHE GLU PRO TYR ILE ASP THR LEU ILE LEU ASP THR LEU SEQRES 4 S 266 SER LEU ASP TYR HIS GLU THR ILE MET ALA ALA ALA GLY SEQRES 5 S 266 ASP ALA ALA GLU ALA ALA LEU GLU GLN ALA VAL ASN SER SEQRES 6 S 266 PRO HIS GLY PHE ILE ALA VAL VAL GLU GLY GLY ILE PRO SEQRES 7 S 266 THR ALA ALA ASN GLY ILE TYR GLY LYS VAL ALA ASN HIS SEQRES 8 S 266 THR MET LEU ASP ILE CYS SER ARG ILE LEU PRO LYS ALA SEQRES 9 S 266 GLN ALA VAL ILE ALA TYR GLY THR CYS ALA THR PHE GLY SEQRES 10 S 266 GLY VAL GLN ALA ALA LYS PRO ASN PRO THR GLY ALA LYS SEQRES 11 S 266 GLY VAL ASN ASP ALA LEU LYS HIS LEU GLY VAL LYS ALA SEQRES 12 S 266 ILE ASN ILE ALA GLY CYS PRO PRO ASN PRO TYR ASN LEU SEQRES 13 S 266 VAL GLY THR ILE VAL TYR TYR LEU LYS ASN LYS ALA ALA SEQRES 14 S 266 PRO GLU LEU ASP SER LEU ASN ARG PRO THR MET PHE PHE SEQRES 15 S 266 GLY GLN THR VAL HIS GLU GLN CYS PRO ARG LEU PRO HIS SEQRES 16 S 266 PHE ASP ALA GLY GLU PHE ALA PRO SER PHE GLU SER GLU SEQRES 17 S 266 GLU ALA ARG LYS GLY TRP CYS LEU TYR GLU LEU GLY CYS SEQRES 18 S 266 LYS GLY PRO VAL THR MET ASN ASN CYS PRO LYS ILE LYS SEQRES 19 S 266 PHE ASN GLN THR ASN TRP PRO VAL ASP ALA GLY HIS PRO SEQRES 20 S 266 CYS ILE GLY CYS SER GLU PRO ASP PHE TRP ASP ALA MET SEQRES 21 S 266 THR PRO PHE TYR GLN ASN MODRES 8W6X CSO L 546 CYS MODIFIED RESIDUE HET CSO L 546 10 HET NFU L 601 9 HET MPD L 602 22 HET MPD L 603 22 HET MPD L 604 21 HET MPD L 605 22 HET MPD L 606 21 HET MPD L 607 22 HET OH L 608 1 HET MG L 609 1 HET CL L 610 1 HET SF4 S1001 8 HET SF4 S1002 8 HET F3S S1003 7 HET MPD S1004 22 HET MPD S1005 22 HET MPD S1006 22 HETNAM CSO S-HYDROXYCYSTEINE HETNAM NFU FORMYL[BIS(HYDROCYANATO-1KAPPAC)]IRONNICKEL(FE-NI) HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM OH HYDROXIDE ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM SF4 IRON/SULFUR CLUSTER HETNAM F3S FE3-S4 CLUSTER HETSYN NFU NI-FE REDUCED ACTIVE CENTER FORMUL 1 CSO C3 H7 N O3 S FORMUL 3 NFU C3 H FE N2 NI O FORMUL 4 MPD 9(C6 H14 O2) FORMUL 10 OH H O 1- FORMUL 11 MG MG 2+ FORMUL 12 CL CL 1- FORMUL 13 SF4 2(FE4 S4) FORMUL 15 F3S FE3 S4 FORMUL 19 HOH *842(H2 O) HELIX 1 AA1 GLY L 60 LYS L 66 1 7 HELIX 2 AA2 ASP L 69 ARG L 71 5 3 HELIX 3 AA3 ASP L 72 ARG L 79 1 8 HELIX 4 AA4 TYR L 86 GLY L 101 1 16 HELIX 5 AA5 PRO L 105 LEU L 131 1 27 HELIX 6 AA6 HIS L 132 PHE L 136 5 5 HELIX 7 AA7 VAL L 139 ALA L 145 5 7 HELIX 8 AA8 ASP L 146 SER L 158 1 13 HELIX 9 AA9 THR L 163 SER L 180 1 18 HELIX 10 AB1 LEU L 183 THR L 187 5 5 HELIX 11 AB2 ASP L 201 ALA L 231 1 31 HELIX 12 AB3 CYS L 246 LEU L 250 5 5 HELIX 13 AB4 THR L 251 VAL L 272 1 22 HELIX 14 AB5 VAL L 272 TYR L 284 1 13 HELIX 15 AB6 LYS L 285 TYR L 290 5 6 HELIX 16 AB7 ASP L 308 ASN L 310 5 3 HELIX 17 AB8 ASP L 331 MET L 333 5 3 HELIX 18 AB9 HIS L 351 GLY L 355 5 5 HELIX 19 AC1 HIS L 365 ARG L 369 5 5 HELIX 20 AC2 GLY L 386 GLN L 397 1 12 HELIX 21 AC3 HIS L 399 GLY L 414 1 16 HELIX 22 AC4 GLY L 416 PHE L 421 5 6 HELIX 23 AC5 SER L 422 LYS L 454 1 33 HELIX 24 AC6 VAL L 500 GLY L 507 1 8 HELIX 25 AC7 SER L 516 ILE L 523 1 8 HELIX 26 AC8 PRO L 533 PHE L 543 1 11 HELIX 27 AC9 ILE L 547 HIS L 552 1 6 HELIX 28 AD1 THR S 18 ARG S 26 1 9 HELIX 29 AD2 TYR S 31 ASP S 38 1 8 HELIX 30 AD3 ALA S 52 ASN S 65 1 14 HELIX 31 AD4 ALA S 81 ILE S 85 5 5 HELIX 32 AD5 MET S 94 LEU S 102 1 9 HELIX 33 AD6 PRO S 103 ALA S 105 5 3 HELIX 34 AD7 GLY S 112 GLY S 118 1 7 HELIX 35 AD8 GLY S 119 ALA S 123 5 5 HELIX 36 AD9 GLY S 132 LEU S 137 1 6 HELIX 37 AE1 LYS S 138 GLY S 141 5 4 HELIX 38 AE2 ASN S 153 LYS S 168 1 16 HELIX 39 AE3 PRO S 179 GLY S 184 1 6 HELIX 40 AE4 VAL S 187 CYS S 191 5 5 HELIX 41 AE5 ARG S 193 ALA S 199 1 7 HELIX 42 AE6 SER S 208 LYS S 213 1 6 HELIX 43 AE7 LYS S 223 THR S 227 5 5 HELIX 44 AE8 ASN S 230 LYS S 235 1 6 HELIX 45 AE9 TRP S 241 GLY S 246 5 6 HELIX 46 AF1 ASP S 256 MET S 261 1 6 SHEET 1 AA1 3 GLY L 23 VAL L 27 0 SHEET 2 AA1 3 LEU L 37 GLU L 44 -1 O VAL L 43 N GLY L 23 SHEET 3 AA1 3 LYS L 47 SER L 55 -1 O LYS L 49 N GLU L 42 SHEET 1 AA2 2 THR L 239 VAL L 240 0 SHEET 2 AA2 2 GLY L 243 VAL L 244 -1 O GLY L 243 N VAL L 240 SHEET 1 AA3 2 PHE L 296 PRO L 303 0 SHEET 2 AA3 2 ARG L 312 VAL L 319 -1 O VAL L 319 N PHE L 296 SHEET 1 AA4 2 ILE L 335 HIS L 338 0 SHEET 2 AA4 2 ALA L 375 TYR L 378 -1 O ARG L 377 N GLU L 336 SHEET 1 AA5 3 ALA L 469 ALA L 477 0 SHEET 2 AA5 3 GLY L 480 GLU L 489 -1 O LEU L 482 N VAL L 475 SHEET 3 AA5 3 LYS L 492 VAL L 499 -1 O GLY L 494 N ARG L 487 SHEET 1 AA6 5 SER S 41 TYR S 44 0 SHEET 2 AA6 5 SER S 8 HIS S 13 1 N VAL S 9 O SER S 41 SHEET 3 AA6 5 PHE S 70 GLU S 75 1 O ILE S 71 N SER S 8 SHEET 4 AA6 5 ALA S 107 TYR S 111 1 O TYR S 111 N VAL S 74 SHEET 5 AA6 5 ILE S 145 ILE S 147 1 O ILE S 147 N ALA S 110 SHEET 1 AA7 2 ILE S 78 PRO S 79 0 SHEET 2 AA7 2 ALA S 130 LYS S 131 -1 O LYS S 131 N ILE S 78 SHEET 1 AA8 2 LYS S 88 VAL S 89 0 SHEET 2 AA8 2 HIS S 92 THR S 93 -1 O HIS S 92 N VAL S 89 SSBOND 1 CYS L 81 CYS L 84 1555 1555 2.04 LINK C BPRO L 545 N BCSO L 546 1555 1555 1.33 LINK C BCSO L 546 N BILE L 547 1555 1555 1.33 LINK OE2BGLU L 34 NI BNFU L 601 1555 1555 1.83 LINK OE2 GLU L 62 MG MG L 609 1555 1555 2.15 LINK SG ACYS L 81 NI ANFU L 601 1555 1555 2.16 LINK SG CYS L 84 FE NFU L 601 1555 1555 2.30 LINK SG CYS L 84 NI ANFU L 601 1555 1555 2.66 LINK O LEU L 498 MG MG L 609 1555 1555 2.13 LINK SG BCSO L 546 NI BNFU L 601 1555 1555 2.25 LINK OD BCSO L 546 FE NFU L 601 1555 1555 2.26 LINK SG ACYS L 546 NI ANFU L 601 1555 1555 2.20 LINK N BCYS L 549 NI BNFU L 601 1555 1555 2.33 LINK SG ACYS L 549 FE NFU L 601 1555 1555 2.32 LINK SG ACYS L 549 NI ANFU L 601 1555 1555 2.57 LINK SG BCYS L 549 FE NFU L 601 1555 1555 2.56 LINK SG BCYS L 549 NI BNFU L 601 1555 1555 2.15 LINK NE2 HIS L 552 MG MG L 609 1555 1555 2.16 LINK FE NFU L 601 O OH L 608 1555 1555 2.09 LINK NI ANFU L 601 O OH L 608 1555 1555 1.74 LINK SG CYS S 17 FE1 SF4 S1001 1555 1555 2.28 LINK SG CYS S 20 FE4 SF4 S1001 1555 1555 2.24 LINK SG CYS S 114 FE2 SF4 S1001 1555 1555 2.29 LINK SG CYS S 150 FE3 SF4 S1001 1555 1555 2.26 LINK ND1 HIS S 188 FE1 SF4 S1002 1555 1555 2.03 LINK SG CYS S 191 FE3 SF4 S1002 1555 1555 2.30 LINK SG CYS S 216 FE4 SF4 S1002 1555 1555 2.28 LINK SG CYS S 222 FE2 SF4 S1002 1555 1555 2.31 LINK SG CYS S 231 FE3 F3S S1003 1555 1555 2.29 LINK SG CYS S 249 FE1 F3S S1003 1555 1555 2.32 LINK SG CYS S 252 FE4 F3S S1003 1555 1555 2.33 CISPEP 1 ASP L 28 PRO L 29 0 8.68 CISPEP 2 ASN L 233 PRO L 234 0 10.71 CISPEP 3 GLU S 29 PRO S 30 0 7.91 CISPEP 4 GLU S 29 PRO S 30 0 3.88 CISPEP 5 LYS S 124 PRO S 125 0 1.19 CISPEP 6 LYS S 124 PRO S 125 0 -0.66 CISPEP 7 CYS S 150 PRO S 151 0 -0.99 CISPEP 8 THR S 262 PRO S 263 0 -3.63 CRYST1 66.705 98.485 126.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014991 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007883 0.00000