HEADER PHOTOSYNTHESIS 12-SEP-23 8WCL TITLE FCP PENTAMER IN CHAETOCEROS GRACILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLOROPHYLL A/C-BINDING PROTEIN LHCF6; COMPND 3 CHAIN: 6; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: CHLOROPHYLL A/B-BINDING PROTEIN; COMPND 6 CHAIN: 8, 5; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: FUCOXANTHIN-CHLOROPHYLL A/C PROTEIN; COMPND 9 CHAIN: 9; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: CHLOROPHYLL A/C-BINDING PROTEIN LHCF7; COMPND 12 CHAIN: 7 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOCEROS NEOGRACILIS; SOURCE 3 ORGANISM_TAXID: 240364; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: CHAETOCEROS NEOGRACILIS; SOURCE 6 ORGANISM_TAXID: 240364; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: CHAETOCEROS NEOGRACILIS; SOURCE 9 ORGANISM_TAXID: 240364; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: CHAETOCEROS NEOGRACILIS; SOURCE 12 ORGANISM_TAXID: 240364 KEYWDS FCP PENTAMER IN CHAETOCEROS GRACILIS, PHOTOSYNTHESIS EXPDTA ELECTRON MICROSCOPY AUTHOR Y.FENG,Z.LI,C.ZHOU,C.LIU,J.-R.SHEN,W.WANG REVDAT 1 31-JUL-24 8WCL 0 JRNL AUTH C.ZHOU,Y.FENG,Z.LI,L.SHEN,X.LI,Y.WANG,G.HAN,T.KUANG,C.LIU, JRNL AUTH 2 J.R.SHEN,W.WANG JRNL TITL STRUCTURAL AND SPECTROSCOPIC INSIGHTS INTO FUCOXANTHIN JRNL TITL 2 CHLOROPHYLL A/C-BINDING PROTEINS OF DIATOMS IN DIVERSE JRNL TITL 3 OLIGOMERIC STATES. JRNL REF PLANT COMMUN. 01041 2024 JRNL REFN ISSN 2590-3462 JRNL PMID 39030906 JRNL DOI 10.1016/J.XPLC.2024.101041 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.650 REMARK 3 NUMBER OF PARTICLES : 681510 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8WCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1300040987. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : FCP PENTAMER IN CHAETOCEROS REMARK 245 GRACILIS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 6, 8, 9, 5, 7 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET 6 1 REMARK 465 MET 6 2 REMARK 465 LYS 6 3 REMARK 465 THR 6 4 REMARK 465 ALA 6 5 REMARK 465 ILE 6 6 REMARK 465 LEU 6 7 REMARK 465 ALA 6 8 REMARK 465 ALA 6 9 REMARK 465 MET 6 10 REMARK 465 LEU 6 11 REMARK 465 GLY 6 12 REMARK 465 SER 6 13 REMARK 465 ALA 6 14 REMARK 465 ALA 6 15 REMARK 465 ALA 6 16 REMARK 465 PHE 6 17 REMARK 465 VAL 6 18 REMARK 465 PRO 6 19 REMARK 465 ALA 6 20 REMARK 465 GLN 6 21 REMARK 465 GLN 6 22 REMARK 465 SER 6 23 REMARK 465 LYS 6 24 REMARK 465 VAL 6 25 REMARK 465 SER 6 26 REMARK 465 THR 6 27 REMARK 465 SER 6 28 REMARK 465 LEU 6 29 REMARK 465 ALA 6 30 REMARK 465 ALA 6 31 REMARK 465 SER 6 32 REMARK 465 ALA 6 198 REMARK 465 GLY 6 199 REMARK 465 HIS 6 200 REMARK 465 PHE 6 201 REMARK 465 SER 6 202 REMARK 465 PRO 6 203 REMARK 465 PHE 6 204 REMARK 465 GLY 6 205 REMARK 465 ASP 6 206 REMARK 465 GLY 6 207 REMARK 465 GLN 6 208 REMARK 465 GLY 6 209 REMARK 465 PHE 6 210 REMARK 465 PHE 6 211 REMARK 465 MET 8 1 REMARK 465 LYS 8 2 REMARK 465 LEU 8 3 REMARK 465 ALA 8 4 REMARK 465 VAL 8 5 REMARK 465 ALA 8 6 REMARK 465 ALA 8 7 REMARK 465 LEU 8 8 REMARK 465 LEU 8 9 REMARK 465 VAL 8 10 REMARK 465 ALA 8 11 REMARK 465 SER 8 12 REMARK 465 ALA 8 13 REMARK 465 ALA 8 14 REMARK 465 ALA 8 15 REMARK 465 PHE 8 16 REMARK 465 ALA 8 17 REMARK 465 PRO 8 18 REMARK 465 ALA 8 19 REMARK 465 PRO 8 20 REMARK 465 ALA 8 21 REMARK 465 SER 8 22 REMARK 465 LYS 8 23 REMARK 465 ALA 8 24 REMARK 465 SER 8 25 REMARK 465 THR 8 26 REMARK 465 SER 8 27 REMARK 465 LEU 8 28 REMARK 465 LYS 8 29 REMARK 465 VAL 8 30 REMARK 465 SER 8 31 REMARK 465 GLY 8 201 REMARK 465 ASP 8 202 REMARK 465 GLY 8 203 REMARK 465 GLN 8 204 REMARK 465 GLY 8 205 REMARK 465 VAL 8 206 REMARK 465 PHE 8 207 REMARK 465 MET 9 1 REMARK 465 LYS 9 2 REMARK 465 LEU 9 3 REMARK 465 ALA 9 4 REMARK 465 LEU 9 5 REMARK 465 LEU 9 6 REMARK 465 ALA 9 7 REMARK 465 SER 9 8 REMARK 465 LEU 9 9 REMARK 465 VAL 9 10 REMARK 465 ALA 9 11 REMARK 465 SER 9 12 REMARK 465 ALA 9 13 REMARK 465 ALA 9 14 REMARK 465 ALA 9 15 REMARK 465 PHE 9 16 REMARK 465 ALA 9 17 REMARK 465 PRO 9 18 REMARK 465 SER 9 19 REMARK 465 LYS 9 20 REMARK 465 VAL 9 21 REMARK 465 ALA 9 22 REMARK 465 GLN 9 23 REMARK 465 THR 9 24 REMARK 465 SER 9 25 REMARK 465 THR 9 26 REMARK 465 ALA 9 27 REMARK 465 LEU 9 28 REMARK 465 LYS 9 29 REMARK 465 GLN 9 195 REMARK 465 MET 5 1 REMARK 465 LYS 5 2 REMARK 465 LEU 5 3 REMARK 465 ALA 5 4 REMARK 465 VAL 5 5 REMARK 465 ALA 5 6 REMARK 465 ALA 5 7 REMARK 465 LEU 5 8 REMARK 465 LEU 5 9 REMARK 465 VAL 5 10 REMARK 465 ALA 5 11 REMARK 465 SER 5 12 REMARK 465 ALA 5 13 REMARK 465 ALA 5 14 REMARK 465 ALA 5 15 REMARK 465 PHE 5 16 REMARK 465 ALA 5 17 REMARK 465 PRO 5 18 REMARK 465 ALA 5 19 REMARK 465 PRO 5 20 REMARK 465 ALA 5 21 REMARK 465 SER 5 22 REMARK 465 LYS 5 23 REMARK 465 ALA 5 24 REMARK 465 SER 5 25 REMARK 465 THR 5 26 REMARK 465 SER 5 27 REMARK 465 LEU 5 28 REMARK 465 LYS 5 29 REMARK 465 VAL 5 30 REMARK 465 GLY 5 201 REMARK 465 ASP 5 202 REMARK 465 GLY 5 203 REMARK 465 GLN 5 204 REMARK 465 GLY 5 205 REMARK 465 VAL 5 206 REMARK 465 PHE 5 207 REMARK 465 MET 7 1 REMARK 465 LYS 7 2 REMARK 465 LEU 7 3 REMARK 465 ALA 7 4 REMARK 465 ILE 7 5 REMARK 465 ALA 7 6 REMARK 465 ALA 7 7 REMARK 465 LEU 7 8 REMARK 465 LEU 7 9 REMARK 465 ALA 7 10 REMARK 465 THR 7 11 REMARK 465 SER 7 12 REMARK 465 ALA 7 13 REMARK 465 ALA 7 14 REMARK 465 ALA 7 15 REMARK 465 PHE 7 16 REMARK 465 THR 7 17 REMARK 465 THR 7 18 REMARK 465 SER 7 19 REMARK 465 PRO 7 20 REMARK 465 ALA 7 21 REMARK 465 SER 7 22 REMARK 465 ARG 7 23 REMARK 465 ALA 7 24 REMARK 465 THR 7 25 REMARK 465 THR 7 26 REMARK 465 SER 7 27 REMARK 465 LEU 7 28 REMARK 465 GLN 7 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER 8 194 OG REMARK 470 SER 5 31 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU 6 147 33.53 -98.25 REMARK 500 GLU 8 53 64.01 35.73 REMARK 500 ALA 8 130 -62.67 -90.94 REMARK 500 PRO 8 199 47.13 -82.32 REMARK 500 LEU 9 35 -5.42 84.49 REMARK 500 VAL 9 131 -61.20 -95.48 REMARK 500 PRO 5 199 45.45 -82.99 REMARK 500 TYR 7 141 51.46 -93.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CLA 6 306 REMARK 610 CLA 6 308 REMARK 610 CLA 6 313 REMARK 610 CLA 8 309 REMARK 610 CLA 8 312 REMARK 610 CLA 8 314 REMARK 610 CLA 8 315 REMARK 610 CLA 9 308 REMARK 610 CLA 9 309 REMARK 610 CLA 9 312 REMARK 610 CLA 9 313 REMARK 610 CLA 9 316 REMARK 610 LMG 9 317 REMARK 610 CLA 5 309 REMARK 610 CLA 5 312 REMARK 610 CLA 5 314 REMARK 610 CLA 5 315 REMARK 610 LMT 5 316 REMARK 610 CLA 7 311 REMARK 610 CLA 7 314 REMARK 610 LMG 7 317 REMARK 610 LMT 7 318 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC2 6 309 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN 6 121 OE1 REMARK 620 2 KC2 6 309 NB 90.7 REMARK 620 3 KC2 6 309 ND 90.1 178.6 REMARK 620 4 KC2 6 309 NA 95.1 90.0 88.9 REMARK 620 5 KC2 6 309 NC 85.6 90.6 90.6 179.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 6 310 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 6 130 OE1 REMARK 620 2 KC1 6 310 NB 73.4 REMARK 620 3 KC1 6 310 ND 109.2 176.4 REMARK 620 4 KC1 6 310 NA 110.2 91.2 90.2 REMARK 620 5 KC1 6 310 NC 72.9 89.3 89.1 176.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA 6 311 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 6 167 OE2 REMARK 620 2 CLA 6 311 NA 92.6 REMARK 620 3 CLA 6 311 NB 89.5 92.0 REMARK 620 4 CLA 6 311 NC 87.9 176.5 91.4 REMARK 620 5 CLA 6 311 ND 91.0 90.5 177.4 86.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 6 312 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN 6 170 OD1 REMARK 620 2 KC1 6 312 NB 91.4 REMARK 620 3 KC1 6 312 ND 86.6 177.7 REMARK 620 4 KC1 6 312 NA 96.9 91.5 90.0 REMARK 620 5 KC1 6 312 NC 80.7 89.2 89.2 177.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA 8 307 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 8 64 OE2 REMARK 620 2 CLA 8 307 NA 88.0 REMARK 620 3 CLA 8 307 NB 86.0 92.0 REMARK 620 4 CLA 8 307 NC 91.7 176.5 91.4 REMARK 620 5 CLA 8 307 ND 93.9 90.7 177.3 85.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 8 311 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 8 128 OE2 REMARK 620 2 KC1 8 311 NB 98.8 REMARK 620 3 KC1 8 311 ND 83.4 177.5 REMARK 620 4 KC1 8 311 NA 84.1 91.6 89.9 REMARK 620 5 KC1 8 311 NC 97.5 89.2 89.3 178.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA 8 312 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 8 163 OE2 REMARK 620 2 CLA 8 312 NA 94.8 REMARK 620 3 CLA 8 312 NB 87.0 92.4 REMARK 620 4 CLA 8 312 NC 84.9 176.6 91.0 REMARK 620 5 CLA 8 312 ND 92.6 90.4 177.2 86.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 8 313 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN 8 166 OD1 REMARK 620 2 KC1 8 313 NB 94.5 REMARK 620 3 KC1 8 313 ND 86.1 178.4 REMARK 620 4 KC1 8 313 NA 88.1 91.4 90.1 REMARK 620 5 KC1 8 313 NC 92.1 89.4 89.1 179.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA 9 313 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 9 128 OE2 REMARK 620 2 CLA 9 313 NA 92.4 REMARK 620 3 CLA 9 313 NB 97.6 92.1 REMARK 620 4 CLA 9 313 NC 87.9 176.6 91.2 REMARK 620 5 CLA 9 313 ND 82.6 90.5 177.4 86.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 9 315 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN 9 171 OE1 REMARK 620 2 KC1 9 315 NB 95.7 REMARK 620 3 KC1 9 315 ND 85.9 177.6 REMARK 620 4 KC1 9 315 NA 99.5 91.4 90.1 REMARK 620 5 KC1 9 315 NC 82.3 89.3 89.1 177.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 5 311 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 5 128 OE1 REMARK 620 2 KC1 5 311 NB 75.1 REMARK 620 3 KC1 5 311 ND 106.2 177.4 REMARK 620 4 KC1 5 311 NA 112.8 91.4 90.1 REMARK 620 5 KC1 5 311 NC 69.2 89.3 89.1 178.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 5 313 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN 5 166 OD1 REMARK 620 2 KC1 5 313 NB 92.2 REMARK 620 3 KC1 5 313 ND 89.6 177.8 REMARK 620 4 KC1 5 313 NA 83.6 91.3 90.1 REMARK 620 5 KC1 5 313 NC 97.5 89.3 89.2 178.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA 7 309 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 7 64 OE2 REMARK 620 2 CLA 7 309 NA 86.5 REMARK 620 3 CLA 7 309 NB 87.6 92.1 REMARK 620 4 CLA 7 309 NC 93.4 176.5 91.4 REMARK 620 5 CLA 7 309 ND 92.5 90.6 177.3 85.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 7 313 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU 7 128 OE2 REMARK 620 2 KC1 7 313 NB 102.0 REMARK 620 3 KC1 7 313 ND 79.3 177.8 REMARK 620 4 KC1 7 313 NA 100.6 91.5 90.0 REMARK 620 5 KC1 7 313 NC 80.8 89.3 89.2 178.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 7 315 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN 7 166 OD1 REMARK 620 2 KC1 7 315 NB 101.8 REMARK 620 3 KC1 7 315 ND 79.2 178.3 REMARK 620 4 KC1 7 315 NA 81.5 91.4 90.1 REMARK 620 5 KC1 7 315 NC 98.7 89.4 89.1 179.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-37442 RELATED DB: EMDB REMARK 900 FCP PENTAMER IN CHAETOCEROS GRACILIS DBREF 8WCL 6 1 211 PDB 8WCL 8WCL 1 211 DBREF 8WCL 8 1 207 PDB 8WCL 8WCL 1 207 DBREF 8WCL 9 1 195 PDB 8WCL 8WCL 1 195 DBREF 8WCL 5 1 207 PDB 8WCL 8WCL 1 207 DBREF 8WCL 7 1 207 PDB 8WCL 8WCL 1 207 SEQRES 1 6 211 MET MET LYS THR ALA ILE LEU ALA ALA MET LEU GLY SER SEQRES 2 6 211 ALA ALA ALA PHE VAL PRO ALA GLN GLN SER LYS VAL SER SEQRES 3 6 211 THR SER LEU ALA ALA SER GLU LEU GLU ASP GLY ILE GLY SEQRES 4 6 211 ALA VAL ALA PRO LEU GLY TYR PHE ASP PRO LEU GLY TYR SEQRES 5 6 211 ILE LYS ASP GLU GLU THR PHE ILE ARG TYR ARG ALA VAL SEQRES 6 6 211 GLU ARG LYS HIS GLY ARG VAL ALA MET MET ALA MET LEU SEQRES 7 6 211 GLY THR PHE VAL HIS ASN ASN GLY TRP THR PHE ASP GLY SEQRES 8 6 211 TYR LEU SER PRO SER GLN GLY LEU LYS PHE SER ASP ILE SEQRES 9 6 211 ASP SER GLY ILE GLY GLY LEU PHE GLN VAL PRO PRO ALA SEQRES 10 6 211 GLY LEU ALA GLN ILE ILE LEU LEU CYS GLY PHE VAL GLU SEQRES 11 6 211 LEU ALA TRP TRP PRO ALA SER ASN LEU SER GLY ASP TYR SEQRES 12 6 211 GLY VAL ARG LEU GLY THR LEU ASN ASP TRP GLU GLU GLN SEQRES 13 6 211 PRO ALA LYS TYR TYR ARG GLN LYS ASN ALA GLU LEU ASN SEQRES 14 6 211 ASN GLY ARG ALA ALA MET MET GLY ILE LEU GLY THR PHE SEQRES 15 6 211 THR HIS GLU VAL ILE THR GLY GLN ASN PHE ALA GLU GLN SEQRES 16 6 211 ALA ALA ALA GLY HIS PHE SER PRO PHE GLY ASP GLY GLN SEQRES 17 6 211 GLY PHE PHE SEQRES 1 8 207 MET LYS LEU ALA VAL ALA ALA LEU LEU VAL ALA SER ALA SEQRES 2 8 207 ALA ALA PHE ALA PRO ALA PRO ALA SER LYS ALA SER THR SEQRES 3 8 207 SER LEU LYS VAL SER GLU ILE GLU LEU GLY VAL THR GLU SEQRES 4 8 207 PRO LEU GLY VAL TYR ASP PRO LEU GLY TRP LEU GLU SER SEQRES 5 8 207 GLU PRO GLU ALA PHE GLU ARG ARG ARG ALA VAL GLU ARG SEQRES 6 8 207 LYS HIS GLY ARG VAL ALA MET ALA ALA VAL VAL GLY THR SEQRES 7 8 207 ILE VAL HIS ASN ASN HIS ILE VAL PHE ASP GLY TYR LEU SEQRES 8 8 207 SER PRO SER ASN ASN LEU LYS PHE SER ASP ILE PRO THR SEQRES 9 8 207 GLY VAL ASP GLY ILE ARG ALA ILE PRO THR ALA GLY LEU SEQRES 10 8 207 ALA GLN ILE LEU ALA PHE PHE ALA LEU VAL GLU LEU ALA SEQRES 11 8 207 TRP MET PRO ALA SER LYS TYR ASP GLY ASP TYR GLY VAL SEQRES 12 8 207 GLY TYR PHE GLY THR ASP ILE LYS ASP PRO GLU GLU LYS SEQRES 13 8 207 ALA ARG LYS LEU ASN VAL GLU LEU ASN ASN GLY ARG ALA SEQRES 14 8 207 ALA MET MET GLY ILE MET GLY ASN MET VAL ALA GLU VAL SEQRES 15 8 207 LEU THR GLY GLN THR MET TYR GLU GLN TYR ALA SER GLY SEQRES 16 8 207 HIS ILE SER PRO PHE GLY ASP GLY GLN GLY VAL PHE SEQRES 1 9 195 MET LYS LEU ALA LEU LEU ALA SER LEU VAL ALA SER ALA SEQRES 2 9 195 ALA ALA PHE ALA PRO SER LYS VAL ALA GLN THR SER THR SEQRES 3 9 195 ALA LEU LYS ALA PHE GLU ASN GLU LEU GLY ALA GLN PRO SEQRES 4 9 195 PRO LEU GLY PHE PHE ASP PRO LEU GLY LEU VAL GLU ASP SEQRES 5 9 195 GLY ASN GLN ALA LYS PHE ASP ARG LEU ARG TYR VAL GLU SEQRES 6 9 195 LEU LYS HIS GLY ARG ILE SER MET LEU ALA VAL VAL GLY SEQRES 7 9 195 TYR LEU ILE GLU LYS ALA GLY ILE ARG LEU PRO GLY ASN SEQRES 8 9 195 ILE SER TYR ASP GLY THR SER PHE ALA ASP ILE PRO ASP SEQRES 9 9 195 GLY PHE ALA ALA LEU SER LYS ILE PRO ASP ALA GLY LEU SEQRES 10 9 195 PHE GLN LEU PHE ALA PHE ILE GLY PHE LEU GLU VAL PHE SEQRES 11 9 195 VAL MET LYS ASP ILE THR GLY GLY GLU PHE VAL GLY ASP SEQRES 12 9 195 PHE ARG ASN GLY PHE ILE ASP PHE GLY TRP ASP SER PHE SEQRES 13 9 195 ASP GLU GLU THR LYS LEU LYS LYS ARG ALA ILE GLU LEU SEQRES 14 9 195 ASN GLN GLY ARG ALA ALA MET MET GLY ILE LEU ALA LEU SEQRES 15 9 195 MET VAL HIS GLU LYS LEU GLY VAL SER LEU LEU PRO GLN SEQRES 1 5 207 MET LYS LEU ALA VAL ALA ALA LEU LEU VAL ALA SER ALA SEQRES 2 5 207 ALA ALA PHE ALA PRO ALA PRO ALA SER LYS ALA SER THR SEQRES 3 5 207 SER LEU LYS VAL SER GLU ILE GLU LEU GLY VAL THR GLU SEQRES 4 5 207 PRO LEU GLY VAL TYR ASP PRO LEU GLY TRP LEU GLU SER SEQRES 5 5 207 GLU PRO GLU ALA PHE GLU ARG ARG ARG ALA VAL GLU ARG SEQRES 6 5 207 LYS HIS GLY ARG VAL ALA MET ALA ALA VAL VAL GLY THR SEQRES 7 5 207 ILE VAL HIS ASN ASN HIS ILE VAL PHE ASP GLY TYR LEU SEQRES 8 5 207 SER PRO SER ASN ASN LEU LYS PHE SER ASP ILE PRO THR SEQRES 9 5 207 GLY VAL ASP GLY ILE ARG ALA ILE PRO THR ALA GLY LEU SEQRES 10 5 207 ALA GLN ILE LEU ALA PHE PHE ALA LEU VAL GLU LEU ALA SEQRES 11 5 207 TRP MET PRO ALA SER LYS TYR ASP GLY ASP TYR GLY VAL SEQRES 12 5 207 GLY TYR PHE GLY THR ASP ILE LYS ASP PRO GLU GLU LYS SEQRES 13 5 207 ALA ARG LYS LEU ASN VAL GLU LEU ASN ASN GLY ARG ALA SEQRES 14 5 207 ALA MET MET GLY ILE MET GLY ASN MET VAL ALA GLU VAL SEQRES 15 5 207 LEU THR GLY GLN THR MET TYR GLU GLN TYR ALA SER GLY SEQRES 16 5 207 HIS ILE SER PRO PHE GLY ASP GLY GLN GLY VAL PHE SEQRES 1 7 207 MET LYS LEU ALA ILE ALA ALA LEU LEU ALA THR SER ALA SEQRES 2 7 207 ALA ALA PHE THR THR SER PRO ALA SER ARG ALA THR THR SEQRES 3 7 207 SER LEU GLN VAL SER GLU ILE GLU LEU GLY ALA THR GLU SEQRES 4 7 207 PRO LEU GLY VAL PHE ASP PRO LEU GLY TRP LEU GLU THR SEQRES 5 7 207 GLU PRO GLU ALA PHE GLU ARG ARG ARG ALA VAL GLU ARG SEQRES 6 7 207 LYS HIS GLY ARG VAL ALA MET ALA ALA VAL VAL GLY THR SEQRES 7 7 207 ILE VAL HIS ASN ASN HIS ILE VAL PHE ASP GLY TYR ILE SEQRES 8 7 207 SER PRO SER ASN ASN LEU LYS PHE SER ASP ILE PRO THR SEQRES 9 7 207 GLY ILE ASP GLY ILE PHE SER VAL PRO THR ALA GLY LEU SEQRES 10 7 207 ALA GLN ILE ILE ALA PHE LEU GLY PHE VAL GLU LEU ALA SEQRES 11 7 207 TRP LEU PRO ALA SER GLN TYR ASP GLY ASP TYR GLY VAL SEQRES 12 7 207 GLY TYR PHE GLY ASN ASP ILE LEU ASP PRO GLU GLU LYS SEQRES 13 7 207 ALA ARG LYS LEU ASN ALA GLU LEU ASN ASN GLY ARG ALA SEQRES 14 7 207 ALA MET MET GLY ILE MET GLY ASN MET VAL ALA GLU LYS SEQRES 15 7 207 ILE THR GLY GLN THR MET TYR GLU GLN TYR ALA ALA GLY SEQRES 16 7 207 HIS PHE ASN PRO PHE ASN ASP GLY GLU GLY PHE PHE HET A86 6 301 48 HET A86 6 302 48 HET A86 6 303 48 HET A86 6 304 48 HET CLA 6 305 65 HET CLA 6 306 60 HET KC2 6 307 45 HET CLA 6 308 55 HET KC2 6 309 45 HET KC1 6 310 45 HET CLA 6 311 65 HET KC1 6 312 45 HET CLA 6 313 47 HET CLA 6 314 65 HET A86 8 301 48 HET A86 8 302 48 HET A86 8 303 48 HET A86 8 304 48 HET A86 8 305 48 HET A86 8 306 48 HET CLA 8 307 65 HET KC2 8 308 45 HET CLA 8 309 55 HET KC2 8 310 45 HET KC1 8 311 45 HET CLA 8 312 47 HET KC1 8 313 45 HET CLA 8 314 46 HET CLA 8 315 46 HET LMT 8 316 35 HET A86 9 301 48 HET A86 9 302 48 HET A86 9 303 48 HET A86 9 304 48 HET A86 9 305 48 HET A86 9 306 48 HET A86 9 307 48 HET CLA 9 308 42 HET CLA 9 309 60 HET KC2 9 310 45 HET CLA 9 311 65 HET CLA 9 312 46 HET CLA 9 313 60 HET CLA 9 314 65 HET KC1 9 315 45 HET CLA 9 316 41 HET LMG 9 317 34 HET A86 5 301 48 HET A86 5 302 48 HET A86 5 303 48 HET A86 5 304 48 HET A86 5 305 48 HET CLA 5 306 65 HET CLA 5 307 65 HET KC2 5 308 45 HET CLA 5 309 55 HET KC2 5 310 45 HET KC1 5 311 45 HET CLA 5 312 47 HET KC1 5 313 45 HET CLA 5 314 46 HET CLA 5 315 46 HET LMT 5 316 31 HET LMT 5 317 35 HET A86 5 318 48 HET A86 7 301 48 HET A86 7 302 48 HET A86 7 303 48 HET A86 7 304 48 HET A86 7 305 48 HET A86 7 306 48 HET A86 7 307 48 HET CLA 7 308 65 HET CLA 7 309 65 HET KC2 7 310 45 HET CLA 7 311 55 HET KC2 7 312 45 HET KC1 7 313 45 HET CLA 7 314 47 HET KC1 7 315 45 HET CLA 7 316 65 HET LMG 7 317 47 HET LMT 7 318 31 HET LMT 7 319 35 HETNAM A86 (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-DIHYDROXY-8-OXO-6',7'- HETNAM 2 A86 DIDEHYDRO-5,5',6,6',7,8-HEXAHYDRO-5,6-EPOXY-BETA,BETA- HETNAM 3 A86 CAROTEN-3'- YL ACETATE HETNAM CLA CHLOROPHYLL A HETNAM KC2 CHLOROPHYLL C2 HETNAM KC1 CHLOROPHYLL C1 HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM LMG 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE HETSYN A86 FUCOXANTHIN FORMUL 6 A86 30(C42 H58 O6) FORMUL 10 CLA 29(C55 H72 MG N4 O5) FORMUL 12 KC2 9(C35 H28 MG N4 O5) FORMUL 15 KC1 9(C35 H30 MG N4 O5) FORMUL 35 LMT 5(C24 H46 O11) FORMUL 52 LMG 2(C45 H86 O10) HELIX 1 AA1 ASP 6 55 ASN 6 85 1 31 HELIX 2 AA2 PRO 6 95 GLY 6 98 5 4 HELIX 3 AA3 SER 6 102 ILE 6 104 5 3 HELIX 4 AA4 GLY 6 110 VAL 6 114 5 5 HELIX 5 AA5 PRO 6 115 ALA 6 132 1 18 HELIX 6 AA6 LEU 6 147 ASP 6 152 5 6 HELIX 7 AA7 GLN 6 156 GLY 6 189 1 34 HELIX 8 AA8 ASN 6 191 ALA 6 196 1 6 HELIX 9 AA9 GLU 8 53 GLU 8 55 5 3 HELIX 10 AB1 ALA 8 56 ASN 8 83 1 28 HELIX 11 AB2 PRO 8 93 ASN 8 96 5 4 HELIX 12 AB3 GLY 8 108 ILE 8 112 5 5 HELIX 13 AB4 PRO 8 113 ALA 8 130 1 18 HELIX 14 AB5 ASP 8 152 GLY 8 185 1 34 HELIX 15 AB6 THR 8 187 SER 8 194 1 8 HELIX 16 AB7 ASN 9 54 ALA 9 84 1 31 HELIX 17 AB8 SER 9 98 ILE 9 102 5 5 HELIX 18 AB9 ASP 9 104 LEU 9 109 5 6 HELIX 19 AC1 PRO 9 113 VAL 9 131 1 19 HELIX 20 AC2 GLY 9 152 PHE 9 156 5 5 HELIX 21 AC3 ASP 9 157 LEU 9 188 1 32 HELIX 22 AC4 GLY 5 48 GLU 5 53 1 6 HELIX 23 AC5 ALA 5 56 ASN 5 83 1 28 HELIX 24 AC6 ASP 5 107 ILE 5 112 1 6 HELIX 25 AC7 PRO 5 113 ALA 5 130 1 18 HELIX 26 AC8 ASP 5 152 GLY 5 185 1 34 HELIX 27 AC9 THR 5 187 SER 5 194 1 8 HELIX 28 AD1 SER 7 31 LEU 7 35 5 5 HELIX 29 AD2 GLY 7 48 GLU 7 53 1 6 HELIX 30 AD3 ALA 7 56 ASN 7 83 1 28 HELIX 31 AD4 PRO 7 93 ASN 7 96 5 4 HELIX 32 AD5 ILE 7 106 VAL 7 112 1 7 HELIX 33 AD6 PRO 7 113 ALA 7 130 1 18 HELIX 34 AD7 GLY 7 144 ASN 7 148 5 5 HELIX 35 AD8 ASP 7 152 GLY 7 185 1 34 HELIX 36 AD9 THR 7 187 GLY 7 195 1 9 SHEET 1 AA1 2 TYR 6 92 SER 6 94 0 SHEET 2 AA1 2 LEU 6 99 LYS 6 100 -1 O LEU 6 99 N LEU 6 93 SHEET 1 AA2 2 TYR 8 90 SER 8 92 0 SHEET 2 AA2 2 LEU 8 97 LYS 8 98 -1 O LEU 8 97 N SER 8 92 SHEET 1 AA3 2 TYR 5 90 SER 5 92 0 SHEET 2 AA3 2 LEU 5 97 LYS 5 98 -1 O LEU 5 97 N LEU 5 91 SHEET 1 AA4 2 TYR 7 90 SER 7 92 0 SHEET 2 AA4 2 LEU 7 97 LYS 7 98 -1 O LEU 7 97 N SER 7 92 LINK OE1 GLN 6 121 MG KC2 6 309 1555 1555 2.86 LINK OE1 GLU 6 130 MG KC1 6 310 1555 1555 2.93 LINK OE2 GLU 6 167 MG CLA 6 311 1555 1555 2.95 LINK OD1 ASN 6 170 MG KC1 6 312 1555 1555 2.76 LINK OE2 GLU 8 64 MG CLA 8 307 1555 1555 2.95 LINK OE2 GLU 8 128 MG KC1 8 311 1555 1555 3.00 LINK OE2 GLU 8 163 MG CLA 8 312 1555 1555 2.98 LINK OD1 ASN 8 166 MG KC1 8 313 1555 1555 2.84 LINK OE2 GLU 9 128 MG CLA 9 313 1555 1555 2.94 LINK OE1 GLN 9 171 MG KC1 9 315 1555 1555 2.90 LINK OE1 GLU 5 128 MG KC1 5 311 1555 1555 2.97 LINK OD1 ASN 5 166 MG KC1 5 313 1555 1555 2.78 LINK OE2 GLU 7 64 MG CLA 7 309 1555 1555 2.99 LINK OE2 GLU 7 128 MG KC1 7 313 1555 1555 2.92 LINK OD1 ASN 7 166 MG KC1 7 315 1555 1555 2.83 CISPEP 1 ALA 6 42 PRO 6 43 0 0.89 CISPEP 2 GLU 8 39 PRO 8 40 0 1.19 CISPEP 3 GLU 5 39 PRO 5 40 0 0.28 CISPEP 4 GLU 7 39 PRO 7 40 0 0.15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000