HEADER TRANSFERASE 19-SEP-23 8WEX TITLE CRYSTAL STRUCTURE OF N-ACETYL SUGAR AMIDOTRANSFERASE FROM LEGIONELLA TITLE 2 PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYL SUGAR AMIDOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: D1H98_00335; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS N-ACETYL SUGAR AMIDOTRANSFERASE, ROSSMANOID FOLD, PP-LOOP, LPS KEYWDS 2 BIOSYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.GAO,W.XU,H.GE REVDAT 1 22-MAY-24 8WEX 0 JRNL AUTH J.GAO,W.XU,T.LIU,W.SUN,N.WANG,J.MA,H.GE JRNL TITL STRUCTURAL CHARACTERIZATION OF AN N-ACETYL SUGAR JRNL TITL 2 AMIDOTRANSFERASE INVOLVED IN THE LIPOPOLYSACCHARIDE JRNL TITL 3 BIOSYNTHESIS IN BACTERIA. JRNL REF INT J MOL SCI V. 24 2023 JRNL REFN ESSN 1422-0067 JRNL PMID 37895170 JRNL DOI 10.3390/IJMS242015491 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 41846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2141 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2909 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 232 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.17000 REMARK 3 B22 (A**2) : 0.17000 REMARK 3 B33 (A**2) : -0.55000 REMARK 3 B12 (A**2) : 0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.314 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6418 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5638 ; 0.035 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8689 ; 1.234 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13070 ; 2.273 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 760 ; 6.477 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 377 ;34.114 ;21.989 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1028 ;17.370 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;19.173 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 788 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7250 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1488 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3064 ; 3.577 ; 5.407 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3063 ; 3.577 ; 5.406 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3816 ; 5.329 ; 8.093 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3817 ; 5.329 ; 8.094 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3353 ; 3.783 ; 5.669 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3354 ; 3.783 ; 5.670 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4873 ; 5.979 ; 8.358 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7354 ; 8.177 ;60.715 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7301 ; 8.167 ;60.619 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 12396 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8WEX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1300041166. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97914 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPX REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44179 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 45.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MR-ROSETTA REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 0.2 M AMMONIUM REMARK 280 ACETATE, VAPOR DIFFUSION, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -Y,-X,-Z+1/3 REMARK 290 5555 -X+Y,Y,-Z+2/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 213.11867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 106.55933 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 106.55933 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 213.11867 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 632 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 652 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ALA A 4 REMARK 465 ARG A 5 REMARK 465 ILE A 6 REMARK 465 GLY A 7 REMARK 465 ILE A 8 REMARK 465 ASP A 9 REMARK 465 MET A 10 REMARK 465 SER A 11 REMARK 465 LYS A 12 REMARK 465 ILE A 13 REMARK 465 TYR A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 LYS A 17 REMARK 465 SER A 18 REMARK 465 ILE A 19 REMARK 465 ASP A 20 REMARK 465 LEU A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 PHE A 24 REMARK 465 GLN A 25 REMARK 465 LEU A 26 REMARK 465 PRO A 27 REMARK 465 ASP A 28 REMARK 465 GLU A 29 REMARK 465 LYS A 30 REMARK 465 LEU A 31 REMARK 465 GLN A 32 REMARK 465 THR A 33 REMARK 465 LYS A 34 REMARK 465 TYR A 35 REMARK 465 GLY A 36 REMARK 465 ASN A 55 REMARK 465 SER A 56 REMARK 465 ALA A 57 REMARK 465 VAL A 58 REMARK 465 GLU A 59 REMARK 465 TYR A 60 REMARK 465 GLU A 61 REMARK 465 HIS A 62 REMARK 465 LYS A 63 REMARK 465 LYS A 64 REMARK 465 GLU A 65 REMARK 465 SER A 66 REMARK 465 LYS A 67 REMARK 465 LYS A 68 REMARK 465 HIS A 69 REMARK 465 THR A 70 REMARK 465 ILE A 71 REMARK 465 HIS A 72 REMARK 465 THR A 234 REMARK 465 GLU A 235 REMARK 465 SER A 236 REMARK 465 ALA A 237 REMARK 465 LYS A 238 REMARK 465 ARG A 239 REMARK 465 ASP A 240 REMARK 465 TRP A 241 REMARK 465 LYS A 242 REMARK 465 TYR A 243 REMARK 465 PHE A 244 REMARK 465 THR A 245 REMARK 465 ALA A 246 REMARK 465 GLU A 448 REMARK 465 LYS A 449 REMARK 465 THR A 450 REMARK 465 LYS A 451 REMARK 465 ALA A 452 REMARK 465 GLU A 453 REMARK 465 TYR A 454 REMARK 465 LEU A 455 REMARK 465 ASP A 456 REMARK 465 LEU A 457 REMARK 465 GLU A 458 REMARK 465 THR A 459 REMARK 465 VAL A 460 REMARK 465 MET B -7 REMARK 465 GLY B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 ALA B 4 REMARK 465 ARG B 5 REMARK 465 ILE B 6 REMARK 465 GLY B 7 REMARK 465 ILE B 8 REMARK 465 ASP B 9 REMARK 465 MET B 10 REMARK 465 SER B 11 REMARK 465 LYS B 12 REMARK 465 ILE B 13 REMARK 465 TYR B 14 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 LYS B 17 REMARK 465 SER B 18 REMARK 465 ILE B 19 REMARK 465 ASP B 20 REMARK 465 LEU B 21 REMARK 465 SER B 22 REMARK 465 SER B 23 REMARK 465 PHE B 24 REMARK 465 GLN B 25 REMARK 465 LEU B 26 REMARK 465 PRO B 27 REMARK 465 ASP B 28 REMARK 465 GLU B 29 REMARK 465 LYS B 30 REMARK 465 LEU B 31 REMARK 465 GLN B 32 REMARK 465 THR B 33 REMARK 465 LYS B 34 REMARK 465 TYR B 35 REMARK 465 GLY B 36 REMARK 465 ASN B 55 REMARK 465 SER B 56 REMARK 465 ALA B 57 REMARK 465 VAL B 58 REMARK 465 GLU B 59 REMARK 465 TYR B 60 REMARK 465 GLU B 61 REMARK 465 HIS B 62 REMARK 465 LYS B 63 REMARK 465 LYS B 64 REMARK 465 GLU B 65 REMARK 465 SER B 66 REMARK 465 LYS B 67 REMARK 465 LYS B 68 REMARK 465 HIS B 69 REMARK 465 THR B 70 REMARK 465 ILE B 71 REMARK 465 HIS B 72 REMARK 465 THR B 234 REMARK 465 TYR B 243 REMARK 465 PHE B 244 REMARK 465 THR B 245 REMARK 465 GLU B 436 REMARK 465 GLN B 437 REMARK 465 LYS B 449 REMARK 465 THR B 450 REMARK 465 LYS B 451 REMARK 465 ALA B 452 REMARK 465 GLU B 453 REMARK 465 TYR B 454 REMARK 465 LEU B 455 REMARK 465 ASP B 456 REMARK 465 LEU B 457 REMARK 465 GLU B 458 REMARK 465 THR B 459 REMARK 465 VAL B 460 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ASP A 233 CG OD1 OD2 REMARK 470 ASP A 247 CG OD1 OD2 REMARK 470 ASP A 248 CG OD1 OD2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 SER A 250 OG REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 LYS A 432 CG CD CE NZ REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 ASP A 434 CG OD1 OD2 REMARK 470 GLU A 436 CG CD OE1 OE2 REMARK 470 GLN A 437 CG CD OE1 NE2 REMARK 470 ASP B 233 CG OD1 OD2 REMARK 470 GLU B 235 CG CD OE1 OE2 REMARK 470 SER B 236 OG REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 ARG B 239 CG CD NE CZ NH1 NH2 REMARK 470 TRP B 241 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 241 CZ3 CH2 REMARK 470 LYS B 251 CG CD CE NZ REMARK 470 GLN B 260 CG CD OE1 NE2 REMARK 470 GLU B 320 CG CD OE1 OE2 REMARK 470 LYS B 328 CG CD CE NZ REMARK 470 ASP B 434 CG OD1 OD2 REMARK 470 GLU B 448 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 90 -55.37 -127.42 REMARK 500 ASN A 176 113.90 -35.66 REMARK 500 SER A 331 75.30 51.55 REMARK 500 ASP B 112 -162.28 -76.84 REMARK 500 ASN B 176 114.88 -37.47 REMARK 500 LYS B 249 -73.90 -62.04 REMARK 500 SER B 250 32.95 -92.91 REMARK 500 SER B 331 73.58 50.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 723 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH A 724 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 725 DISTANCE = 7.32 ANGSTROMS REMARK 525 HOH A 726 DISTANCE = 8.61 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 CYS A 47 SG 99.6 REMARK 620 3 CYS A 79 SG 113.6 115.2 REMARK 620 4 CYS A 82 SG 114.7 107.0 106.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 44 SG REMARK 620 2 CYS B 47 SG 95.3 REMARK 620 3 CYS B 79 SG 110.9 117.0 REMARK 620 4 CYS B 82 SG 114.5 109.9 108.8 REMARK 620 N 1 2 3 DBREF1 8WEX A 1 460 UNP A0A3A6V1D8_LEGPN DBREF2 8WEX A A0A3A6V1D8 1 460 DBREF1 8WEX B 1 460 UNP A0A3A6V1D8_LEGPN DBREF2 8WEX B A0A3A6V1D8 1 460 SEQADV 8WEX MET A -7 UNP A0A3A6V1D INITIATING METHIONINE SEQADV 8WEX GLY A -6 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A -5 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A -4 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A -3 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A -2 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A -1 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS A 0 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX MET B -7 UNP A0A3A6V1D INITIATING METHIONINE SEQADV 8WEX GLY B -6 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B -5 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B -4 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B -3 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B -2 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B -1 UNP A0A3A6V1D EXPRESSION TAG SEQADV 8WEX HIS B 0 UNP A0A3A6V1D EXPRESSION TAG SEQRES 1 A 468 MET GLY HIS HIS HIS HIS HIS HIS MET SER ASN ALA ARG SEQRES 2 A 468 ILE GLY ILE ASP MET SER LYS ILE TYR ALA PRO LYS SER SEQRES 3 A 468 ILE ASP LEU SER SER PHE GLN LEU PRO ASP GLU LYS LEU SEQRES 4 A 468 GLN THR LYS TYR GLY LEU PRO HIS LYS VAL GLU PHE CYS SEQRES 5 A 468 LYS SER CYS VAL ILE SER ASN GLN ARG PRO ASN SER ALA SEQRES 6 A 468 VAL GLU TYR GLU HIS LYS LYS GLU SER LYS LYS HIS THR SEQRES 7 A 468 ILE HIS PHE ASP ASP GLU GLY ILE CYS ASP ALA CYS ARG SEQRES 8 A 468 VAL ALA GLU ARG LYS LYS SER THR ILE ASN TRP GLU GLU SEQRES 9 A 468 ARG ASP ARG GLN LEU ARG GLU LEU CYS ASP ARG PHE ARG SEQRES 10 A 468 SER LYS ASP GLY SER TYR ASP CYS VAL VAL PRO GLY SER SEQRES 11 A 468 GLY GLY LYS ASP SER PHE TYR ALA ALA HIS ILE LEU LYS SEQRES 12 A 468 TYR LYS TYR GLY MET ASN PRO LEU THR VAL THR TRP ALA SEQRES 13 A 468 PRO HIS MET TYR THR PRO TRP GLY TRP ARG ASN PHE GLN SEQRES 14 A 468 SER TRP ILE HIS ALA GLY PHE ASP ASN HIS LEU PHE THR SEQRES 15 A 468 PRO ASN GLY ARG VAL HIS ARG LEU LEU THR ARG LEU ALA SEQRES 16 A 468 VAL GLU ASN LEU PHE HIS PRO PHE GLN PRO PHE MET ILE SEQRES 17 A 468 GLY GLN LYS ALA TYR ALA PRO LYS MET ALA LEU LEU HIS SEQRES 18 A 468 LYS ILE LYS LEU VAL VAL TYR GLY GLU ASN GLU ALA GLU SEQRES 19 A 468 TYR GLY ASN PRO ILE GLY ASP THR GLU SER ALA LYS ARG SEQRES 20 A 468 ASP TRP LYS TYR PHE THR ALA ASP ASP LYS SER LYS ILE SEQRES 21 A 468 PHE LEU GLY GLY THR SER VAL GLN GLU LEU LYS SER ASP SEQRES 22 A 468 PHE GLY LEU ASN ASP ASN ASP LEU ASP ALA TYR LEU PRO SEQRES 23 A 468 ALA ASP PRO GLN GLN ILE GLU GLU GLN GLN VAL GLU VAL SEQRES 24 A 468 HIS TYR LEU GLY TYR TYR LEU LYS TRP HIS PRO GLN SER SEQRES 25 A 468 CYS TYR TYR TYR SER VAL GLU HIS GLY GLY PHE GLU ALA SEQRES 26 A 468 SER PRO GLU ARG THR PRO GLY THR TYR SER LYS TYR ASN SEQRES 27 A 468 SER ILE ASP ASP LYS ILE ASP ASP PHE HIS TYR TYR THR SEQRES 28 A 468 THR LEU THR LYS PHE GLY ILE GLY ARG ALA THR TYR ASP SEQRES 29 A 468 ALA SER GLN GLU ILE ARG SER GLY ASP ILE THR ARG GLU SEQRES 30 A 468 GLU GLY VAL ALA LEU VAL LYS ARG PHE ASP GLN GLU PHE SEQRES 31 A 468 PRO GLU ARG PHE ALA GLU GLU ILE PHE LYS TYR LEU SER SEQRES 32 A 468 ILE ASN LEU LYS GLU PHE PRO ILE ALA SER GLN MET PHE SEQRES 33 A 468 GLU GLN PRO ILE MET ASP ARG ALA TYR PHE MET ALA LEU SEQRES 34 A 468 ALA ASP THR PHE ARG SER PRO HIS LEU TRP LYS LYS ASP SEQRES 35 A 468 GLY GLU GLN TRP LYS LEU ARG HIS GLN VAL THR ASN LEU SEQRES 36 A 468 GLU LYS THR LYS ALA GLU TYR LEU ASP LEU GLU THR VAL SEQRES 1 B 468 MET GLY HIS HIS HIS HIS HIS HIS MET SER ASN ALA ARG SEQRES 2 B 468 ILE GLY ILE ASP MET SER LYS ILE TYR ALA PRO LYS SER SEQRES 3 B 468 ILE ASP LEU SER SER PHE GLN LEU PRO ASP GLU LYS LEU SEQRES 4 B 468 GLN THR LYS TYR GLY LEU PRO HIS LYS VAL GLU PHE CYS SEQRES 5 B 468 LYS SER CYS VAL ILE SER ASN GLN ARG PRO ASN SER ALA SEQRES 6 B 468 VAL GLU TYR GLU HIS LYS LYS GLU SER LYS LYS HIS THR SEQRES 7 B 468 ILE HIS PHE ASP ASP GLU GLY ILE CYS ASP ALA CYS ARG SEQRES 8 B 468 VAL ALA GLU ARG LYS LYS SER THR ILE ASN TRP GLU GLU SEQRES 9 B 468 ARG ASP ARG GLN LEU ARG GLU LEU CYS ASP ARG PHE ARG SEQRES 10 B 468 SER LYS ASP GLY SER TYR ASP CYS VAL VAL PRO GLY SER SEQRES 11 B 468 GLY GLY LYS ASP SER PHE TYR ALA ALA HIS ILE LEU LYS SEQRES 12 B 468 TYR LYS TYR GLY MET ASN PRO LEU THR VAL THR TRP ALA SEQRES 13 B 468 PRO HIS MET TYR THR PRO TRP GLY TRP ARG ASN PHE GLN SEQRES 14 B 468 SER TRP ILE HIS ALA GLY PHE ASP ASN HIS LEU PHE THR SEQRES 15 B 468 PRO ASN GLY ARG VAL HIS ARG LEU LEU THR ARG LEU ALA SEQRES 16 B 468 VAL GLU ASN LEU PHE HIS PRO PHE GLN PRO PHE MET ILE SEQRES 17 B 468 GLY GLN LYS ALA TYR ALA PRO LYS MET ALA LEU LEU HIS SEQRES 18 B 468 LYS ILE LYS LEU VAL VAL TYR GLY GLU ASN GLU ALA GLU SEQRES 19 B 468 TYR GLY ASN PRO ILE GLY ASP THR GLU SER ALA LYS ARG SEQRES 20 B 468 ASP TRP LYS TYR PHE THR ALA ASP ASP LYS SER LYS ILE SEQRES 21 B 468 PHE LEU GLY GLY THR SER VAL GLN GLU LEU LYS SER ASP SEQRES 22 B 468 PHE GLY LEU ASN ASP ASN ASP LEU ASP ALA TYR LEU PRO SEQRES 23 B 468 ALA ASP PRO GLN GLN ILE GLU GLU GLN GLN VAL GLU VAL SEQRES 24 B 468 HIS TYR LEU GLY TYR TYR LEU LYS TRP HIS PRO GLN SER SEQRES 25 B 468 CYS TYR TYR TYR SER VAL GLU HIS GLY GLY PHE GLU ALA SEQRES 26 B 468 SER PRO GLU ARG THR PRO GLY THR TYR SER LYS TYR ASN SEQRES 27 B 468 SER ILE ASP ASP LYS ILE ASP ASP PHE HIS TYR TYR THR SEQRES 28 B 468 THR LEU THR LYS PHE GLY ILE GLY ARG ALA THR TYR ASP SEQRES 29 B 468 ALA SER GLN GLU ILE ARG SER GLY ASP ILE THR ARG GLU SEQRES 30 B 468 GLU GLY VAL ALA LEU VAL LYS ARG PHE ASP GLN GLU PHE SEQRES 31 B 468 PRO GLU ARG PHE ALA GLU GLU ILE PHE LYS TYR LEU SER SEQRES 32 B 468 ILE ASN LEU LYS GLU PHE PRO ILE ALA SER GLN MET PHE SEQRES 33 B 468 GLU GLN PRO ILE MET ASP ARG ALA TYR PHE MET ALA LEU SEQRES 34 B 468 ALA ASP THR PHE ARG SER PRO HIS LEU TRP LYS LYS ASP SEQRES 35 B 468 GLY GLU GLN TRP LYS LEU ARG HIS GLN VAL THR ASN LEU SEQRES 36 B 468 GLU LYS THR LYS ALA GLU TYR LEU ASP LEU GLU THR VAL HET ZN A 501 1 HET ZN B 501 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *232(H2 O) HELIX 1 AA1 CYS A 79 ILE A 92 1 14 HELIX 2 AA2 ASN A 93 ARG A 109 1 17 HELIX 3 AA3 GLY A 124 LYS A 137 1 14 HELIX 4 AA4 THR A 153 HIS A 165 1 13 HELIX 5 AA5 ASN A 176 PHE A 192 1 17 HELIX 6 AA6 PHE A 195 HIS A 213 1 19 HELIX 7 AA7 VAL A 259 GLY A 267 1 9 HELIX 8 AA8 ASP A 270 LEU A 277 5 8 HELIX 9 AA9 ASP A 280 GLN A 287 1 8 HELIX 10 AB1 LEU A 294 LEU A 298 1 5 HELIX 11 AB2 HIS A 301 GLY A 314 1 14 HELIX 12 AB3 ILE A 336 GLY A 349 1 14 HELIX 13 AB4 GLY A 351 SER A 363 1 13 HELIX 14 AB5 THR A 367 ASP A 379 1 13 HELIX 15 AB6 PHE A 386 LEU A 394 1 9 HELIX 16 AB7 ILE A 403 PHE A 408 5 6 HELIX 17 AB8 ASP A 414 THR A 424 1 11 HELIX 18 AB9 CYS B 79 ILE B 92 1 14 HELIX 19 AC1 ASN B 93 ARG B 109 1 17 HELIX 20 AC2 GLY B 124 LYS B 137 1 14 HELIX 21 AC3 THR B 153 HIS B 165 1 13 HELIX 22 AC4 ASN B 176 PHE B 192 1 17 HELIX 23 AC5 PHE B 195 HIS B 213 1 19 HELIX 24 AC6 SER B 236 LYS B 242 1 7 HELIX 25 AC7 VAL B 259 GLY B 267 1 9 HELIX 26 AC8 ASP B 270 LEU B 277 5 8 HELIX 27 AC9 ASP B 280 GLN B 287 1 8 HELIX 28 AD1 LEU B 294 LEU B 298 1 5 HELIX 29 AD2 HIS B 301 GLY B 314 1 14 HELIX 30 AD3 ILE B 336 GLY B 349 1 14 HELIX 31 AD4 GLY B 351 SER B 363 1 13 HELIX 32 AD5 THR B 367 ASP B 379 1 13 HELIX 33 AD6 PHE B 386 LEU B 394 1 9 HELIX 34 AD7 ILE B 403 PHE B 408 5 6 HELIX 35 AD8 ASP B 414 THR B 424 1 11 SHEET 1 AA1 6 CYS A 117 PRO A 120 0 SHEET 2 AA1 6 PRO A 142 TRP A 147 1 O LEU A 143 N CYS A 117 SHEET 3 AA1 6 ASN A 170 THR A 174 1 O PHE A 173 N THR A 146 SHEET 4 AA1 6 ASN B 170 THR B 174 -1 O LEU B 172 N LEU A 172 SHEET 5 AA1 6 PRO B 142 TRP B 147 1 N THR B 146 O PHE B 173 SHEET 6 AA1 6 CYS B 117 PRO B 120 1 N CYS B 117 O LEU B 143 SHEET 1 AA2 2 LEU A 217 TYR A 220 0 SHEET 2 AA2 2 GLU A 290 TYR A 293 1 O HIS A 292 N VAL A 218 SHEET 1 AA3 2 PHE A 253 LEU A 254 0 SHEET 2 AA3 2 THR A 257 SER A 258 -1 O THR A 257 N LEU A 254 SHEET 1 AA4 2 TRP A 431 ASP A 434 0 SHEET 2 AA4 2 GLN A 437 LEU A 440 -1 O LYS A 439 N LYS A 432 SHEET 1 AA5 2 LEU B 217 TYR B 220 0 SHEET 2 AA5 2 GLU B 290 TYR B 293 1 O HIS B 292 N VAL B 218 SHEET 1 AA6 2 PHE B 253 LEU B 254 0 SHEET 2 AA6 2 THR B 257 SER B 258 -1 O THR B 257 N LEU B 254 SHEET 1 AA7 2 TRP B 431 LYS B 432 0 SHEET 2 AA7 2 LYS B 439 LEU B 440 -1 O LYS B 439 N LYS B 432 LINK SG CYS A 44 ZN ZN A 501 1555 1555 2.48 LINK SG CYS A 47 ZN ZN A 501 1555 1555 2.18 LINK SG CYS A 79 ZN ZN A 501 1555 1555 2.01 LINK SG CYS A 82 ZN ZN A 501 1555 1555 2.38 LINK SG CYS B 44 ZN ZN B 501 1555 1555 2.51 LINK SG CYS B 47 ZN ZN B 501 1555 1555 2.25 LINK SG CYS B 79 ZN ZN B 501 1555 1555 2.02 LINK SG CYS B 82 ZN ZN B 501 1555 1555 2.26 CRYST1 74.722 74.722 319.678 90.00 90.00 120.00 P 32 1 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013383 0.007727 0.000000 0.00000 SCALE2 0.000000 0.015453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003128 0.00000