HEADER HYDROLASE 05-OCT-23 8WNA TITLE CRYSTAL STRUCTURE OF GH1 BETA-GLUCOSIDASE TD2F2 E352Q LAMINARIBIOSE TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDASE TD2F2; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.21; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOMES; SOURCE 3 ORGANISM_TAXID: 408169; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-GLUCOSIDASE, E352Q NUCLEOPHILE MUTANTS, LAMINARIBIOSE COMPLEX, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.C.LIN,T.J.LU,S.FUSHINOBU REVDAT 1 15-JAN-25 8WNA 0 JRNL AUTH C.C.LIN,T.J.LU,S.FUSHINOBU JRNL TITL STRUCTURAL BASIS FOR SPECIFIC HYDROLYSIS AND SYNTHESIS OF JRNL TITL 2 BETA-1-2-GLUCOSIDIC LINKAGE BY GLUCOSE-TOLERANT JRNL TITL 3 BETA-GLUCOSIDASE TD2F2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 148291 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 7437 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10977 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 305 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3475 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 344 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.019 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.387 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3760 ; 0.016 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3373 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5149 ; 1.907 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7759 ; 0.638 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 6.511 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 30 ; 7.017 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 529 ;13.602 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 548 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4527 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 926 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1818 ; 1.318 ; 1.013 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1818 ; 1.316 ; 1.012 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2287 ; 2.004 ; 1.818 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2288 ; 2.005 ; 1.818 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1942 ; 2.409 ; 1.225 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1943 ; 2.409 ; 1.226 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2862 ; 3.474 ; 2.157 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4505 ; 4.311 ;13.070 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4506 ; 4.310 ;13.070 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8WNA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1300041614. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 155824 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.160 REMARK 200 RESOLUTION RANGE LOW (A) : 48.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.25400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CHES, K/NA TARTRATE, LISO4, PH 9.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.20500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.99400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.20800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.99400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.20500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.20800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ARG A 444 REMARK 465 GLY A 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 27 CD GLU A 27 OE1 -0.083 REMARK 500 GLU A 406 CD GLU A 406 OE1 -0.068 REMARK 500 GLU A 406 CD GLU A 406 OE2 0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 131 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 152 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 HIS A 184 CB - CG - ND1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 209 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 209 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 209 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 242 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 54 -126.32 56.69 REMARK 500 TRP A 122 -5.14 95.73 REMARK 500 ASP A 123 58.45 -93.76 REMARK 500 LEU A 132 -6.72 84.73 REMARK 500 THR A 163 -70.74 -72.11 REMARK 500 ASN A 248 -64.70 -99.83 REMARK 500 THR A 322 -157.28 -91.94 REMARK 500 ASP A 324 -3.62 -140.45 REMARK 500 ARG A 346 149.77 -171.58 REMARK 500 ASP A 369 58.50 -97.70 REMARK 500 TRP A 407 -128.34 49.74 REMARK 500 TRP A 407 -128.34 59.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 77 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 944 DISTANCE = 6.43 ANGSTROMS DBREF 8WNA A -19 445 PDB 8WNA 8WNA -19 445 SEQRES 1 A 465 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 465 LEU VAL PRO ARG GLY SER HIS MET ALA GLY GLU ARG PHE SEQRES 3 A 465 PRO ALA ASP PHE VAL TRP GLY ALA ALA THR ALA ALA TYR SEQRES 4 A 465 GLN ILE GLU GLY ALA VAL ARG GLU ASP GLY ARG GLY VAL SEQRES 5 A 465 SER ILE TRP ASP THR PHE SER HIS THR PRO GLY LYS ILE SEQRES 6 A 465 ALA ASP GLY THR THR GLY ASP VAL ALA CYS ASP SER TYR SEQRES 7 A 465 HIS ARG TYR GLY GLU ASP ILE GLY LEU LEU ASN ALA LEU SEQRES 8 A 465 GLY MET ASN ALA TYR ARG PHE SER ILE ALA TRP PRO ARG SEQRES 9 A 465 ILE VAL PRO LEU GLY ALA GLY PRO ILE ASN GLN ALA GLY SEQRES 10 A 465 LEU ASP HIS TYR SER ARG MET VAL ASP ALA LEU LEU GLY SEQRES 11 A 465 ALA GLY LEU GLN PRO PHE VAL THR LEU TYR HIS TRP ASP SEQRES 12 A 465 LEU PRO GLN PRO LEU GLU ASP ARG LEU GLY TRP GLY SER SEQRES 13 A 465 ARG ALA THR ALA THR VAL PHE ALA GLU TYR ALA ASP ILE SEQRES 14 A 465 VAL VAL ARG GLN LEU GLY ASP ARG VAL THR HIS TRP ALA SEQRES 15 A 465 THR LEU ASN GLU PRO TRP CYS SER ALA MET LEU GLY TYR SEQRES 16 A 465 TYR LEU GLY VAL HIS ALA PRO GLY HIS THR ASP LEU LYS SEQRES 17 A 465 ARG GLY LEU GLU ALA SER HIS ASN LEU LEU LEU GLY HIS SEQRES 18 A 465 GLY LEU ALA VAL GLN ALA MET ARG ALA ALA ALA PRO GLN SEQRES 19 A 465 PRO LEU GLN ILE GLY ILE VAL LEU ASN LEU THR PRO THR SEQRES 20 A 465 TYR PRO ALA SER ASP SER PRO GLU ASP VAL ALA ALA ALA SEQRES 21 A 465 ARG ARG PHE ASP GLY PHE VAL ASN ARG TRP PHE LEU ASP SEQRES 22 A 465 PRO LEU ALA GLY ARG GLY TYR PRO GLN ASP MET LEU ASP SEQRES 23 A 465 TYR TYR GLY ALA ALA ALA PRO GLN ALA ASN PRO GLU ASP SEQRES 24 A 465 LEU THR GLN ILE ALA ALA PRO LEU ASP TRP LEU GLY VAL SEQRES 25 A 465 ASN TYR TYR GLU ARG MET ARG ALA VAL ASP ALA PRO ASP SEQRES 26 A 465 ALA SER LEU PRO GLN ALA GLN ARG LEU ASP ASP PRO ASP SEQRES 27 A 465 LEU PRO HIS THR ALA ASP ARG GLU VAL TYR PRO GLU GLY SEQRES 28 A 465 LEU TYR ASP ILE LEU LEU ARG LEU HIS ASN ASP TYR PRO SEQRES 29 A 465 PHE ARG PRO LEU TYR ILE THR GLN ASN GLY CYS ALA LEU SEQRES 30 A 465 HIS ASP GLU ILE ALA GLU ASP GLY GLY ILE HIS ASP GLY SEQRES 31 A 465 GLN ARG GLN ALA PHE PHE GLU ALA HIS LEU ALA GLN LEU SEQRES 32 A 465 GLN ARG ALA LEU ALA ALA GLY VAL PRO LEU LYS GLY TYR SEQRES 33 A 465 PHE ALA TRP SER LEU LEU ASP ASN PHE GLU TRP ALA MET SEQRES 34 A 465 GLY LEU SER MET ARG TYR GLY ILE CYS TYR THR ASN PHE SEQRES 35 A 465 GLU THR LEU GLU ARG ARG ILE LYS ASP SER GLY TYR TRP SEQRES 36 A 465 LEU ARG ASP PHE ILE ALA GLY GLN ARG GLY HET BGC C 1 12 HET BGC C 2 11 HET GLC B 1 12 HET BGC B 2 11 HET BGC D 1 12 HET BGC D 2 11 HET MLA A 501 7 HET NHE A 502 13 HET SO4 A 503 5 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM MLA MALONIC ACID HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM SO4 SULFATE ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID HETSYN NHE N-CYCLOHEXYLTAURINE; CHES FORMUL 2 BGC 5(C6 H12 O6) FORMUL 3 GLC C6 H12 O6 FORMUL 5 MLA C3 H4 O4 FORMUL 6 NHE C8 H17 N O3 S FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *344(H2 O) HELIX 1 AA1 ALA A 17 GLU A 22 1 6 HELIX 2 AA2 ARG A 26 ARG A 30 5 5 HELIX 3 AA3 SER A 33 HIS A 40 1 8 HELIX 4 AA4 ASP A 56 LEU A 71 1 16 HELIX 5 AA5 ALA A 81 VAL A 86 1 6 HELIX 6 AA6 ASN A 94 ALA A 111 1 18 HELIX 7 AA7 PRO A 125 ASP A 130 1 6 HELIX 8 AA8 ARG A 131 GLY A 135 5 5 HELIX 9 AA9 SER A 136 GLY A 155 1 20 HELIX 10 AB1 GLU A 166 TYR A 176 1 11 HELIX 11 AB2 ASP A 186 ALA A 212 1 27 HELIX 12 AB3 SER A 233 ASN A 248 1 16 HELIX 13 AB4 ASN A 248 ALA A 256 1 9 HELIX 14 AB5 PRO A 261 GLY A 269 1 9 HELIX 15 AB6 ALA A 270 ALA A 272 5 3 HELIX 16 AB7 ASN A 276 ALA A 284 1 9 HELIX 17 AB8 PRO A 329 TYR A 343 1 15 HELIX 18 AB9 ASP A 369 ALA A 389 1 21 HELIX 19 AC1 GLU A 406 MET A 413 5 8 HELIX 20 AC2 LYS A 430 GLY A 442 1 13 SHEET 1 AA1 9 VAL A 11 ALA A 15 0 SHEET 2 AA1 9 ALA A 75 SER A 79 1 O ARG A 77 N ALA A 14 SHEET 3 AA1 9 GLN A 114 TYR A 120 1 O PHE A 116 N TYR A 76 SHEET 4 AA1 9 HIS A 160 ASN A 165 1 O ALA A 162 N LEU A 119 SHEET 5 AA1 9 GLN A 217 ASN A 223 1 O GLY A 219 N TRP A 161 SHEET 6 AA1 9 TRP A 289 ASN A 293 1 O GLY A 291 N ILE A 220 SHEET 7 AA1 9 LEU A 348 ASN A 353 1 O TYR A 349 N VAL A 292 SHEET 8 AA1 9 LEU A 393 TRP A 399 1 O LYS A 394 N LEU A 348 SHEET 9 AA1 9 VAL A 11 ALA A 15 1 N VAL A 11 O TYR A 396 SHEET 1 AA2 3 THR A 227 PRO A 229 0 SHEET 2 AA2 3 MET A 298 ASP A 302 1 O MET A 298 N TYR A 228 SHEET 3 AA2 3 ALA A 311 ARG A 313 -1 O GLN A 312 N VAL A 301 SHEET 1 AA3 2 CYS A 418 THR A 420 0 SHEET 2 AA3 2 ARG A 427 ILE A 429 -1 O ARG A 428 N TYR A 419 LINK O3 BGC C 1 C1 BGC C 2 1555 1555 1.42 LINK O3 GLC B 1 C1 BGC B 2 1555 1555 1.35 LINK O3 BGC D 1 C1 BGC D 2 1555 1555 1.43 CISPEP 1 ALA A 181 PRO A 182 0 2.84 CISPEP 2 LEU A 308 PRO A 309 0 9.84 CISPEP 3 ARG A 346 PRO A 347 0 -8.56 CISPEP 4 TRP A 399 SER A 400 0 -13.10 CRYST1 68.410 68.416 95.988 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014616 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010418 0.00000