HEADER LIGASE 06-OCT-23 8WO3 TITLE CRYSTAL STRUCTURE OF H. PYLORI ISOLEUCYL-TRNA SYNTHETASE (HPILERS) IN TITLE 2 COMPLEX WITH MUPIROCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOLEUCINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ISOLEUCYL-TRNA SYNTHETASE,ILERS; COMPND 5 EC: 6.1.1.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_COMMON: CAMPYLOBACTER PYLORI; SOURCE 4 ORGANISM_TAXID: 210; SOURCE 5 GENE: ILES, C2840_07400; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ISOLEUCYL-TRNA SYNTHETASE, HELICOBACTER PYLORI, HPILERS, ILERS, KEYWDS 2 AMINOACYLATION, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.GUO,S.LI,T.ZHANG REVDAT 2 27-MAR-24 8WO3 1 JRNL REVDAT 1 14-FEB-24 8WO3 0 JRNL AUTH X.CHEN,Y.GUO,J.SHI,Y.WANG,X.GUO,G.WU,S.LI,T.ZHANG JRNL TITL STRUCTURAL BASIS FOR SUBSTRATE AND ANTIBIOTIC RECOGNITION BY JRNL TITL 2 HELICOBACTER PYLORI ISOLEUCYL-TRNA SYNTHETASE. JRNL REF FEBS LETT. V. 598 521 2024 JRNL REFN ISSN 0014-5793 JRNL PMID 38246751 JRNL DOI 10.1002/1873-3468.14805 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 51328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 2474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3500 - 5.7600 0.99 2878 151 0.1451 0.1554 REMARK 3 2 5.7600 - 4.5800 0.99 2850 147 0.1381 0.1886 REMARK 3 3 4.5700 - 4.0000 0.99 2876 140 0.1339 0.1692 REMARK 3 4 4.0000 - 3.6300 0.99 2852 156 0.1508 0.1845 REMARK 3 5 3.6300 - 3.3700 0.99 2840 151 0.1726 0.2260 REMARK 3 6 3.3700 - 3.1700 0.99 2852 140 0.1893 0.2693 REMARK 3 7 3.1700 - 3.0100 0.98 2834 139 0.2008 0.2364 REMARK 3 8 3.0100 - 2.8800 0.98 2843 138 0.1955 0.2509 REMARK 3 9 2.8800 - 2.7700 0.98 2823 141 0.1980 0.2831 REMARK 3 10 2.7700 - 2.6800 0.98 2836 151 0.2068 0.2890 REMARK 3 11 2.6800 - 2.5900 0.97 2777 140 0.2040 0.2444 REMARK 3 12 2.5900 - 2.5200 0.97 2818 126 0.2012 0.2504 REMARK 3 13 2.5200 - 2.4500 0.96 2793 148 0.1924 0.2440 REMARK 3 14 2.4500 - 2.3900 0.94 2690 126 0.2041 0.2546 REMARK 3 15 2.3900 - 2.3400 0.89 2591 136 0.2088 0.2931 REMARK 3 16 2.3400 - 2.2900 0.84 2428 124 0.2273 0.3205 REMARK 3 17 2.2900 - 2.2400 0.79 2301 106 0.2400 0.3041 REMARK 3 18 2.2400 - 2.2000 0.70 1972 114 0.2543 0.2888 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 NULL REMARK 3 ANGLE : 0.728 NULL REMARK 3 CHIRALITY : 0.047 1127 REMARK 3 PLANARITY : 0.006 1315 REMARK 3 DIHEDRAL : 14.733 2854 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5067 11.5680 2.3501 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.1967 REMARK 3 T33: 0.2799 T12: 0.0282 REMARK 3 T13: -0.0225 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 0.1705 L22: 0.4263 REMARK 3 L33: 1.9170 L12: 0.0927 REMARK 3 L13: -0.2943 L23: 0.3971 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: -0.0633 S13: -0.1100 REMARK 3 S21: 0.1342 S22: -0.0797 S23: -0.0546 REMARK 3 S31: 0.3251 S32: 0.1616 S33: 0.0957 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7200 21.6549 -45.9028 REMARK 3 T TENSOR REMARK 3 T11: 0.2031 T22: 0.2056 REMARK 3 T33: 0.1914 T12: -0.0313 REMARK 3 T13: -0.0022 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 3.0484 L22: 4.5101 REMARK 3 L33: 4.2697 L12: 1.6779 REMARK 3 L13: -0.4163 L23: -3.6179 REMARK 3 S TENSOR REMARK 3 S11: -0.1184 S12: 0.1319 S13: 0.1998 REMARK 3 S21: -0.1162 S22: 0.1472 S23: 0.0644 REMARK 3 S31: -0.1669 S32: 0.1068 S33: -0.0371 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 566 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0575 8.8073 -21.0186 REMARK 3 T TENSOR REMARK 3 T11: 0.1899 T22: 0.1770 REMARK 3 T33: 0.2817 T12: 0.0290 REMARK 3 T13: -0.0437 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 1.3580 L22: 0.4663 REMARK 3 L33: 2.2260 L12: 0.1339 REMARK 3 L13: -1.2130 L23: 0.2290 REMARK 3 S TENSOR REMARK 3 S11: -0.1154 S12: 0.0536 S13: -0.2286 REMARK 3 S21: -0.0478 S22: -0.0166 S23: 0.0154 REMARK 3 S31: 0.2617 S32: -0.0915 S33: 0.1284 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 567 THROUGH 920 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4492 38.5742 27.2942 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.2505 REMARK 3 T33: 0.3150 T12: -0.0278 REMARK 3 T13: -0.0152 T23: 0.0555 REMARK 3 L TENSOR REMARK 3 L11: 0.5964 L22: 1.1899 REMARK 3 L33: 4.3386 L12: 0.6365 REMARK 3 L13: 1.5172 L23: 2.1097 REMARK 3 S TENSOR REMARK 3 S11: -0.1032 S12: -0.1015 S13: 0.1380 REMARK 3 S21: -0.0768 S22: -0.0646 S23: 0.0342 REMARK 3 S31: -0.2069 S32: -0.0187 S33: 0.1569 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8WO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 11-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1300041600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53104 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.5, 2% (V/V) REMARK 280 TACSIMATE, AND 20% (W/V) POLYETHYLENE GLYCOL (PEG) 3,350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 ASP A 6 CG OD1 OD2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 GLU A 202 CG CD OE1 OE2 REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 LYS A 626 CG CD CE NZ REMARK 470 GLU A 683 CG CD OE1 OE2 REMARK 470 GLU A 855 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 539 130.29 -38.33 REMARK 500 ASN A 728 -72.20 -96.70 REMARK 500 ILE A 733 -62.52 -101.21 REMARK 500 LEU A 774 59.38 -101.52 REMARK 500 PHE A 814 30.30 -88.91 REMARK 500 PHE A 871 129.85 -171.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 895 SG REMARK 620 2 CYS A 898 SG 107.8 REMARK 620 3 CYS A 910 SG 113.9 112.0 REMARK 620 4 CYS A 913 SG 110.9 109.9 102.3 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8WNF RELATED DB: PDB DBREF1 8WO3 A 1 920 UNP A0A2J9KLI1_HELPX DBREF2 8WO3 A A0A2J9KLI1 1 920 SEQADV 8WO3 SER A 0 UNP A0A2J9KLI EXPRESSION TAG SEQRES 1 A 921 SER MET GLU GLU TYR LYS ASP THR LEU ASN LEU ASN THR SEQRES 2 A 921 THR THR PHE SER MET LYS GLY ASN LEU SER VAL ASN GLU SEQRES 3 A 921 PRO LYS THR TYR ALA LYS TRP GLN GLU GLN GLN ALA PHE SEQRES 4 A 921 LYS ARG MET GLN ALA ARG LYS ASP ASN HIS GLY ASP PHE SEQRES 5 A 921 THR LEU HIS ASP GLY PRO PRO TYR ALA ASN GLY HIS LEU SEQRES 6 A 921 HIS LEU GLY HIS ALA LEU ASN LYS ILE LEU LYS ASP ILE SEQRES 7 A 921 VAL VAL LYS ARG GLU TYR PHE LYS GLY LYS LYS ILE TYR SEQRES 8 A 921 TYR THR PRO GLY TRP ASP CYS HIS GLY LEU PRO ILE GLU SEQRES 9 A 921 GLN GLN ILE LEU GLU ARG LEU GLU LYS GLU LYS THR SER SEQRES 10 A 921 LEU GLU ASN PRO THR LEU PHE ARG GLU LYS CYS ARG ASP SEQRES 11 A 921 HIS ALA LYS LYS PHE LEU GLU ILE GLN LYS ASN GLU PHE SEQRES 12 A 921 LEU GLN LEU GLY VAL LEU GLY ASP PHE GLU ASP PRO TYR SEQRES 13 A 921 LYS THR MET ASP PHE LYS PHE GLU ALA SER ILE TYR ARG SEQRES 14 A 921 ALA LEU VAL GLU VAL ALA LYS LYS GLY LEU LEU LYS GLU SEQRES 15 A 921 ARG HIS LYS PRO ILE TYR TRP SER TYR ALA CYS GLU SER SEQRES 16 A 921 ALA LEU ALA GLU ALA GLU VAL GLU TYR LYS MET LYS LYS SEQRES 17 A 921 SER PRO SER ILE PHE VAL ALA PHE GLY LEU LYS LYS GLU SEQRES 18 A 921 SER LEU GLU LYS LEU LYS VAL LYS LYS ALA SER LEU VAL SEQRES 19 A 921 ILE TRP THR THR THR PRO TRP THR LEU TYR ALA ASN VAL SEQRES 20 A 921 ALA ILE ALA LEU LYS LYS ASP ALA VAL TYR ALA LEU THR SEQRES 21 A 921 GLN LYS GLY TYR LEU VAL ALA LYS ALA LEU HIS GLU LYS SEQRES 22 A 921 LEU ALA ALA LEU GLY VAL VAL ASP ASN GLU ILE THR HIS SEQRES 23 A 921 GLU PHE ASN SER ASN ASP LEU GLU TYR LEU VAL ALA THR SEQRES 24 A 921 ASN PRO LEU ASN GLN ARG ASP SER LEU VAL ALA LEU GLY SEQRES 25 A 921 GLU HIS VAL GLY LEU GLU ASP GLY THR GLY ALA VAL HIS SEQRES 26 A 921 THR ALA PRO GLY HIS GLY GLU GLU ASP TYR TYR LEU GLY SEQRES 27 A 921 LEU ARG TYR ASN LEU GLU VAL LEU MET SER VAL ASP GLU SEQRES 28 A 921 LYS GLY CYS TYR ASP GLU GLY ILE ILE HIS ASN GLN LEU SEQRES 29 A 921 LEU ASP GLU SER TYR LEU GLY GLU HIS VAL PHE LYS ALA SEQRES 30 A 921 GLN LYS ARG ILE ILE GLU GLN LEU GLY ASP SER LEU LEU SEQRES 31 A 921 LEU GLU GLN GLU ILE GLU HIS SER TYR PRO HIS CYS TRP SEQRES 32 A 921 ARG THR HIS LYS PRO VAL ILE TYR ARG ALA THR THR GLN SEQRES 33 A 921 TRP PHE ILE LEU MET ASP GLU PRO PHE ILE GLN ASN ASP SEQRES 34 A 921 GLY SER GLN LYS THR LEU ARG GLU VAL ALA LEU ASP ALA SEQRES 35 A 921 ILE GLU LYS VAL GLU PHE VAL PRO SER SER GLY LYS ASN SEQRES 36 A 921 ARG LEU LYS THR MET ILE GLU ASN ARG PRO ASP TRP CYS SEQRES 37 A 921 LEU SER ARG GLN ARG LYS TRP GLY VAL PRO LEU ALA PHE SEQRES 38 A 921 PHE ILE ASP LYS ARG THR ASN LYS PRO CYS PHE GLU SER SEQRES 39 A 921 GLU VAL LEU GLU HIS VAL ALA ASN LEU PHE GLU LYS LYS SEQRES 40 A 921 GLY CYS ASP VAL TRP TRP GLU TYR SER VAL LYS ASP LEU SEQRES 41 A 921 LEU PRO PRO SER TYR GLN GLU ASP ALA LYS HIS TYR GLU SEQRES 42 A 921 LYS ILE MET HIS ILE LEU ASP VAL TRP PHE ASP SER GLY SEQRES 43 A 921 SER THR PHE LYS ALA VAL LEU GLU ASP TYR HIS GLY GLU SEQRES 44 A 921 LYS GLY GLN SER PRO SER ASP VAL ILE LEU GLU GLY SER SEQRES 45 A 921 ASP GLN HIS ARG GLY TRP PHE GLN SER SER LEU LEU ILE SEQRES 46 A 921 GLY CYS VAL LEU ASN ASN GLN ALA PRO PHE LYS LYS VAL SEQRES 47 A 921 ILE THR HIS GLY PHE ILE VAL ASP GLU LYS GLY GLU LYS SEQRES 48 A 921 MET SER LYS SER LYS GLY ASN VAL VAL SER LEU ASP LYS SEQRES 49 A 921 LEU LEU LYS THR HIS GLY SER ASP VAL VAL ARG LEU TRP SEQRES 50 A 921 VAL ALA PHE ASN ASP TYR GLN ASN ASP LEU ARG VAL SER SEQRES 51 A 921 GLN THR PHE PHE THR GLN THR GLU GLN HIS TYR LYS LYS SEQRES 52 A 921 PHE ARG ASN THR LEU LYS PHE LEU LEU ALA ASN PHE SER SEQRES 53 A 921 ASP MET ASP LEU LYS ASN LEU GLU ARG PRO HIS ASN PHE SEQRES 54 A 921 SER PRO LEU ASP HIS PHE MET LEU GLU THR LEU GLU THR SEQRES 55 A 921 ILE SER ALA GLY VAL ASN SER ALA PHE GLU GLU HIS ASP SEQRES 56 A 921 PHE VAL LYS GLY LEU ASN ILE LEU MET ALA PHE VAL THR SEQRES 57 A 921 ASN GLU LEU SER GLY ILE TYR LEU ASP ALA CYS LYS ASP SEQRES 58 A 921 SER LEU TYR CYS ASP SER LYS ASN ASN GLU LYS ARG GLN SEQRES 59 A 921 ALA ILE GLN MET VAL LEU LEU ALA THR ALA SER LYS LEU SEQRES 60 A 921 CYS TYR PHE LEU ALA PRO ILE LEU THR HIS THR ILE GLU SEQRES 61 A 921 GLU VAL LEU GLU HIS SER GLN ALA LEU ARG ILE PHE LEU SEQRES 62 A 921 GLN ALA LYS ASP VAL PHE ASP LEU LYS ASP ILE SER VAL SEQRES 63 A 921 SER GLU LYS LEU HIS LEU LYS GLU PHE LYS LYS PRO GLU SEQRES 64 A 921 ASN PHE GLU ALA VAL LEU ALA LEU ARG SER ALA PHE ASN SEQRES 65 A 921 GLU GLU LEU ASP ARG LEU LYS LYS GLU GLY VAL ILE LYS SEQRES 66 A 921 ASN SER LEU GLU CYS ALA ILE GLU VAL LYS GLU LYS ALA SEQRES 67 A 921 LEU ASP GLU ASN LEU VAL GLU GLU LEU LEU MET VAL SER SEQRES 68 A 921 PHE VAL GLY ILE ALA LYS GLU LYS LEU SER GLU THR PRO SEQRES 69 A 921 ALA PHE THR LEU PHE LYS ALA PRO PHE TYR LYS CYS PRO SEQRES 70 A 921 ARG CYS TRP ARG PHE LYS SER GLU LEU GLU ASN THR PRO SEQRES 71 A 921 CYS LYS ARG CYS GLU GLN VAL LEU LYS GLU ARG HET ZN A1001 1 HET GOL A1002 6 HET GOL A1003 6 HET GOL A1004 6 HET ACT A1005 4 HET MRC A1006 35 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETNAM MRC MUPIROCIN HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN MRC 9-[(E)-4-[(2S,3R,4R,5S)-3,4-BIS(OXIDANYL)-5-[[(2S,3S)- HETSYN 2 MRC 3-[(2S,3S)-3-OXIDANYLBUTAN-2-YL]OXIRAN-2- HETSYN 3 MRC YL]METHYL]OXAN-2-YL]-3-METHYL-BUT-2-ENOYL]OXYNONANOIC HETSYN 4 MRC ACID; PSEUDOMONIC ACID FORMUL 2 ZN ZN 2+ FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 MRC C26 H44 O9 FORMUL 8 HOH *455(H2 O) HELIX 1 AA1 TYR A 4 LEU A 8 5 5 HELIX 2 AA2 ASN A 20 GLN A 35 1 16 HELIX 3 AA3 GLN A 36 ALA A 43 1 8 HELIX 4 AA4 HIS A 65 LYS A 85 1 21 HELIX 5 AA5 GLY A 99 GLU A 113 1 15 HELIX 6 AA6 ASN A 119 GLN A 144 1 26 HELIX 7 AA7 ASP A 159 LYS A 176 1 18 HELIX 8 AA8 ALA A 197 ALA A 199 5 3 HELIX 9 AA9 LYS A 218 LYS A 226 1 9 HELIX 10 AB1 THR A 238 ASN A 245 5 8 HELIX 11 AB2 LEU A 269 LEU A 276 1 8 HELIX 12 AB3 SER A 289 GLU A 293 1 5 HELIX 13 AB4 GLY A 330 TYR A 340 1 11 HELIX 14 AB5 GLU A 356 ASN A 361 1 6 HELIX 15 AB6 ASP A 365 LEU A 369 5 5 HELIX 16 AB7 HIS A 372 LEU A 384 1 13 HELIX 17 AB8 THR A 433 GLU A 443 1 11 HELIX 18 AB9 SER A 451 ARG A 463 1 13 HELIX 19 AC1 GLU A 492 GLY A 507 1 16 HELIX 20 AC2 CYS A 508 TYR A 514 1 7 HELIX 21 AC3 SER A 515 LEU A 520 1 6 HELIX 22 AC4 PRO A 521 LYS A 529 5 9 HELIX 23 AC5 ASP A 539 SER A 546 1 8 HELIX 24 AC6 SER A 546 LEU A 552 1 7 HELIX 25 AC7 ASP A 572 ARG A 575 5 4 HELIX 26 AC8 GLY A 576 ASN A 589 1 14 HELIX 27 AC9 SER A 620 GLY A 629 1 10 HELIX 28 AD1 GLY A 629 PHE A 639 1 11 HELIX 29 AD2 SER A 649 SER A 675 1 27 HELIX 30 AD3 ASP A 678 ARG A 684 5 7 HELIX 31 AD4 SER A 689 GLU A 712 1 24 HELIX 32 AD5 ASP A 714 ASN A 728 1 15 HELIX 33 AD6 ILE A 733 ASP A 745 1 13 HELIX 34 AD7 ASN A 749 ALA A 771 1 23 HELIX 35 AD8 LEU A 774 HIS A 784 1 11 HELIX 36 AD9 SER A 785 LEU A 792 1 8 HELIX 37 AE1 ASP A 796 LEU A 800 5 5 HELIX 38 AE2 SER A 804 LEU A 809 1 6 HELIX 39 AE3 PHE A 820 GLU A 840 1 21 HELIX 40 AE4 ASN A 845 LEU A 847 5 3 HELIX 41 AE5 ASP A 859 MET A 868 1 10 HELIX 42 AE6 CYS A 910 GLU A 919 1 10 SHEET 1 AA1 2 ASP A 50 THR A 52 0 SHEET 2 AA1 2 LYS A 88 TYR A 90 1 O TYR A 90 N PHE A 51 SHEET 1 AA2 2 GLY A 94 TRP A 95 0 SHEET 2 AA2 2 TYR A 155 LYS A 156 1 O TYR A 155 N TRP A 95 SHEET 1 AA3 4 SER A 194 ALA A 195 0 SHEET 2 AA3 4 LEU A 179 SER A 189 -1 N SER A 189 O SER A 194 SHEET 3 AA3 4 ILE A 409 ILE A 418 -1 O ILE A 409 N TRP A 188 SHEET 4 AA3 4 TRP A 466 CYS A 467 -1 O TRP A 466 N ILE A 418 SHEET 1 AA4 9 ILE A 283 ASN A 288 0 SHEET 2 AA4 9 VAL A 255 THR A 259 -1 N LEU A 258 O HIS A 285 SHEET 3 AA4 9 TYR A 263 ALA A 266 -1 O VAL A 265 N ALA A 257 SHEET 4 AA4 9 SER A 231 THR A 236 1 N SER A 231 O LEU A 264 SHEET 5 AA4 9 VAL A 201 LEU A 217 -1 N PHE A 215 O LEU A 232 SHEET 6 AA4 9 VAL A 296 THR A 298 -1 O THR A 298 N GLY A 216 SHEET 7 AA4 9 ASP A 305 GLY A 311 -1 O SER A 306 N ALA A 297 SHEET 8 AA4 9 ALA A 247 LYS A 251 1 N ILE A 248 O ALA A 309 SHEET 9 AA4 9 ALA A 322 THR A 325 -1 O THR A 325 N ALA A 247 SHEET 1 AA5 6 ILE A 283 ASN A 288 0 SHEET 2 AA5 6 VAL A 255 THR A 259 -1 N LEU A 258 O HIS A 285 SHEET 3 AA5 6 TYR A 263 ALA A 266 -1 O VAL A 265 N ALA A 257 SHEET 4 AA5 6 SER A 231 THR A 236 1 N SER A 231 O LEU A 264 SHEET 5 AA5 6 VAL A 201 LEU A 217 -1 N PHE A 215 O LEU A 232 SHEET 6 AA5 6 LEU A 388 CYS A 401 -1 O TYR A 398 N LYS A 204 SHEET 1 AA6 2 PHE A 424 ILE A 425 0 SHEET 2 AA6 2 GLN A 431 LYS A 432 -1 O LYS A 432 N PHE A 424 SHEET 1 AA7 3 GLU A 446 VAL A 448 0 SHEET 2 AA7 3 LYS A 596 HIS A 600 1 O VAL A 597 N VAL A 448 SHEET 3 AA7 3 ILE A 567 GLY A 570 1 N ILE A 567 O ILE A 598 SHEET 1 AA8 2 SER A 469 ARG A 470 0 SHEET 2 AA8 2 ILE A 537 LEU A 538 -1 O ILE A 537 N ARG A 470 SHEET 1 AA9 3 LYS A 488 PRO A 489 0 SHEET 2 AA9 3 PHE A 481 ASP A 483 -1 N ASP A 483 O LYS A 488 SHEET 3 AA9 3 TYR A 531 LYS A 533 -1 O GLU A 532 N ILE A 482 SHEET 1 AB1 2 ILE A 603 VAL A 604 0 SHEET 2 AB1 2 LEU A 646 ARG A 647 1 O LEU A 646 N VAL A 604 SHEET 1 AB2 4 PHE A 871 VAL A 872 0 SHEET 2 AB2 4 CYS A 849 VAL A 853 1 N ILE A 851 O PHE A 871 SHEET 3 AB2 4 PHE A 885 LYS A 889 -1 O PHE A 888 N ALA A 850 SHEET 4 AB2 4 LYS A 878 GLU A 881 -1 N LEU A 879 O LEU A 887 SHEET 1 AB3 2 TYR A 893 LYS A 894 0 SHEET 2 AB3 2 PHE A 901 SER A 903 -1 O SER A 903 N TYR A 893 LINK SG CYS A 895 ZN ZN A1001 1555 1555 2.35 LINK SG CYS A 898 ZN ZN A1001 1555 1555 2.35 LINK SG CYS A 910 ZN ZN A1001 1555 1555 2.34 LINK SG CYS A 913 ZN ZN A1001 1555 1555 2.34 CISPEP 1 VAL A 448 PRO A 449 0 -0.81 CISPEP 2 SER A 562 PRO A 563 0 -0.47 CRYST1 52.912 53.131 103.394 92.35 97.68 104.42 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018899 0.004860 0.002933 0.00000 SCALE2 0.000000 0.019434 0.001509 0.00000 SCALE3 0.000000 0.000000 0.009789 0.00000