HEADER DNA BINDING PROTEIN 07-OCT-23 8WOH TITLE HUMAN DSDNA SENSOR CCDC25 COMPLEXED WITH 18BP DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 18BP DNA; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 18BP DNA; COMPND 7 CHAIN: D; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: COILED-COIL DOMAIN-CONTAINING PROTEIN 25; COMPND 11 CHAIN: B, A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: CCDC25; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DSDNA, SENSOR, COMPLEX, NET DNA, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.WEN,B.X.WU REVDAT 1 09-OCT-24 8WOH 0 JRNL AUTH Y.WEN,B.X.WU JRNL TITL HUMAN DSDNA SENSOR CCDC25 COMPLEXED WITH 18BP DNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2000 - 4.6100 1.00 3128 176 0.1950 0.2640 REMARK 3 2 4.6100 - 3.6600 1.00 3031 145 0.2876 0.3381 REMARK 3 3 3.6600 - 3.2000 1.00 2982 152 0.3009 0.3659 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.417 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.651 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 130.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 131.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3824 REMARK 3 ANGLE : 1.286 5267 REMARK 3 CHIRALITY : 0.066 562 REMARK 3 PLANARITY : 0.015 563 REMARK 3 DIHEDRAL : 25.895 707 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 10.8227 -2.1819 -14.3333 REMARK 3 T TENSOR REMARK 3 T11: 0.6380 T22: 0.5929 REMARK 3 T33: 0.5961 T12: -0.0877 REMARK 3 T13: -0.0183 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 2.9036 L22: 2.6409 REMARK 3 L33: 2.3344 L12: -0.6476 REMARK 3 L13: -0.7380 L23: 0.9569 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0592 S13: 0.5995 REMARK 3 S21: -0.0016 S22: 0.1336 S23: -0.0635 REMARK 3 S31: -0.2036 S32: 0.0235 S33: -0.1489 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "A" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and resid -4 through 176) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 1 through 4 or REMARK 3 resid 6 through 15)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "D" and ((resid 2 and (name O5" or REMARK 3 name C5" or name C4" or name O4" or name REMARK 3 C3" or name O3" or name C2" or name C1" REMARK 3 or name N9 or name C8 or name N7 or name REMARK 3 C5 or name C6 or name O6 or name N1 or REMARK 3 name C2 or name N2 or name N3 or name C4 ) REMARK 3 ) or resid 3 through 11 or resid 13 REMARK 3 through 16)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8WOH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1300041674. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9651 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 1.27400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 5.0, 10% MPD PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.83000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.68900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.98200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.68900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.83000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.98200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA C -1 REMARK 465 DA C 0 REMARK 465 DA C 17 REMARK 465 DT D -1 REMARK 465 DT D 0 REMARK 465 DT D 17 REMARK 465 GLU B 179 REMARK 465 MET B 180 REMARK 465 ASP B 181 REMARK 465 GLU B 182 REMARK 465 LEU B 183 REMARK 465 ARG B 184 REMARK 465 SER B 185 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 LYS A 177 REMARK 465 ARG A 178 REMARK 465 GLU A 179 REMARK 465 MET A 180 REMARK 465 ASP A 181 REMARK 465 GLU A 182 REMARK 465 LEU A 183 REMARK 465 ARG A 184 REMARK 465 SER A 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG C 1 P OP1 OP2 REMARK 470 DA D 1 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N2 DG C 12 O2 DC D 5 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O5' DG C 1 O3' DT C 16 2455 2.10 REMARK 500 OP2 DA D 12 NZ LYS B 115 4445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA C 9 O3' DA C 9 C3' -0.054 REMARK 500 DT D 8 O3' DT D 8 C3' -0.049 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 1 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT C 5 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DT C 5 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DA C 9 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG C 10 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT C 16 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DA D 14 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B -6 66.17 -69.50 REMARK 500 HIS B -4 -127.39 -89.37 REMARK 500 ALA B 48 -177.60 -68.87 REMARK 500 ASN B 78 39.37 -93.14 REMARK 500 ASP B 105 -159.20 -99.92 REMARK 500 PHE B 141 77.51 -116.31 REMARK 500 LYS B 177 48.35 -141.58 REMARK 500 ASN A 78 42.20 -95.56 REMARK 500 ASP A 105 -157.99 50.35 REMARK 500 PHE A 141 77.29 -119.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 132 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8WOH C -1 17 PDB 8WOH 8WOH -1 17 DBREF 8WOH D -1 17 PDB 8WOH 8WOH -1 17 DBREF 8WOH B 1 185 UNP Q86WR0 CCD25_HUMAN 1 185 DBREF 8WOH A 1 185 UNP Q86WR0 CCD25_HUMAN 1 185 SEQADV 8WOH HIS B -8 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS B -7 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS B -6 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS B -5 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS B -4 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS B -3 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH SER B -2 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH SER B -1 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH GLY B 0 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -8 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -7 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -6 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -5 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -4 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH HIS A -3 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH SER A -2 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH SER A -1 UNP Q86WR0 EXPRESSION TAG SEQADV 8WOH GLY A 0 UNP Q86WR0 EXPRESSION TAG SEQRES 1 C 19 DA DA DG DA DT DC DT DA DC DT DA DG DT SEQRES 2 C 19 DG DA DT DC DT DA SEQRES 1 D 19 DT DT DA DG DA DT DC DA DC DT DA DG DT SEQRES 2 D 19 DA DG DA DT DC DT SEQRES 1 B 194 HIS HIS HIS HIS HIS HIS SER SER GLY MET VAL PHE TYR SEQRES 2 B 194 PHE THR SER SER SER VAL ASN SER SER ALA TYR THR ILE SEQRES 3 B 194 TYR MET GLY LYS ASP LYS TYR GLU ASN GLU ASP LEU ILE SEQRES 4 B 194 LYS HIS GLY TRP PRO GLU ASP ILE TRP PHE HIS VAL ASP SEQRES 5 B 194 LYS LEU SER SER ALA HIS VAL TYR LEU ARG LEU HIS LYS SEQRES 6 B 194 GLY GLU ASN ILE GLU ASP ILE PRO LYS GLU VAL LEU MET SEQRES 7 B 194 ASP CYS ALA HIS LEU VAL LYS ALA ASN SER ILE GLN GLY SEQRES 8 B 194 CYS LYS MET ASN ASN VAL ASN VAL VAL TYR THR PRO TRP SEQRES 9 B 194 SER ASN LEU LYS LYS THR ALA ASP MET ASP VAL GLY GLN SEQRES 10 B 194 ILE GLY PHE HIS ARG GLN LYS ASP VAL LYS ILE VAL THR SEQRES 11 B 194 VAL GLU LYS LYS VAL ASN GLU ILE LEU ASN ARG LEU GLU SEQRES 12 B 194 LYS THR LYS VAL GLU ARG PHE PRO ASP LEU ALA ALA GLU SEQRES 13 B 194 LYS GLU CYS ARG ASP ARG GLU GLU ARG ASN GLU LYS LYS SEQRES 14 B 194 ALA GLN ILE GLN GLU MET LYS LYS ARG GLU LYS GLU GLU SEQRES 15 B 194 MET LYS LYS LYS ARG GLU MET ASP GLU LEU ARG SER SEQRES 1 A 194 HIS HIS HIS HIS HIS HIS SER SER GLY MET VAL PHE TYR SEQRES 2 A 194 PHE THR SER SER SER VAL ASN SER SER ALA TYR THR ILE SEQRES 3 A 194 TYR MET GLY LYS ASP LYS TYR GLU ASN GLU ASP LEU ILE SEQRES 4 A 194 LYS HIS GLY TRP PRO GLU ASP ILE TRP PHE HIS VAL ASP SEQRES 5 A 194 LYS LEU SER SER ALA HIS VAL TYR LEU ARG LEU HIS LYS SEQRES 6 A 194 GLY GLU ASN ILE GLU ASP ILE PRO LYS GLU VAL LEU MET SEQRES 7 A 194 ASP CYS ALA HIS LEU VAL LYS ALA ASN SER ILE GLN GLY SEQRES 8 A 194 CYS LYS MET ASN ASN VAL ASN VAL VAL TYR THR PRO TRP SEQRES 9 A 194 SER ASN LEU LYS LYS THR ALA ASP MET ASP VAL GLY GLN SEQRES 10 A 194 ILE GLY PHE HIS ARG GLN LYS ASP VAL LYS ILE VAL THR SEQRES 11 A 194 VAL GLU LYS LYS VAL ASN GLU ILE LEU ASN ARG LEU GLU SEQRES 12 A 194 LYS THR LYS VAL GLU ARG PHE PRO ASP LEU ALA ALA GLU SEQRES 13 A 194 LYS GLU CYS ARG ASP ARG GLU GLU ARG ASN GLU LYS LYS SEQRES 14 A 194 ALA GLN ILE GLN GLU MET LYS LYS ARG GLU LYS GLU GLU SEQRES 15 A 194 MET LYS LYS LYS ARG GLU MET ASP GLU LEU ARG SER HELIX 1 AA1 ASP B 22 GLY B 33 1 12 HELIX 2 AA2 ASN B 59 ILE B 63 5 5 HELIX 3 AA3 PRO B 64 ASN B 78 1 15 HELIX 4 AA4 VAL B 126 LYS B 135 1 10 HELIX 5 AA5 ASP B 143 LYS B 177 1 35 HELIX 6 AA6 ASP A 22 GLY A 33 1 12 HELIX 7 AA7 ASN A 59 ILE A 63 5 5 HELIX 8 AA8 PRO A 64 ASN A 78 1 15 HELIX 9 AA9 ARG A 113 VAL A 117 5 5 HELIX 10 AB1 VAL A 126 LYS A 135 1 10 HELIX 11 AB2 ASP A 143 LYS A 176 1 34 SHEET 1 AA1 7 LYS B 118 VAL B 122 0 SHEET 2 AA1 7 VAL B 88 PRO B 94 -1 N VAL B 90 O VAL B 120 SHEET 3 AA1 7 ASP B 37 VAL B 42 -1 N TRP B 39 O THR B 93 SHEET 4 AA1 7 HIS B 49 ARG B 53 -1 O LEU B 52 N ILE B 38 SHEET 5 AA1 7 ALA B 14 GLY B 20 -1 N TYR B 18 O TYR B 51 SHEET 6 AA1 7 VAL B 2 SER B 8 -1 N PHE B 5 O ILE B 17 SHEET 7 AA1 7 VAL B 138 ARG B 140 -1 O ARG B 140 N VAL B 2 SHEET 1 AA2 2 LEU B 98 LYS B 99 0 SHEET 2 AA2 2 GLY B 110 PHE B 111 -1 O GLY B 110 N LYS B 99 SHEET 1 AA3 7 LYS A 118 VAL A 122 0 SHEET 2 AA3 7 VAL A 88 PRO A 94 -1 N VAL A 88 O VAL A 122 SHEET 3 AA3 7 ASP A 37 VAL A 42 -1 N HIS A 41 O VAL A 91 SHEET 4 AA3 7 VAL A 50 ARG A 53 -1 O LEU A 52 N ILE A 38 SHEET 5 AA3 7 ALA A 14 GLY A 20 -1 N TYR A 18 O TYR A 51 SHEET 6 AA3 7 VAL A 2 SER A 8 -1 N SER A 7 O TYR A 15 SHEET 7 AA3 7 VAL A 138 ARG A 140 -1 O ARG A 140 N VAL A 2 SHEET 1 AA4 2 LEU A 98 LYS A 99 0 SHEET 2 AA4 2 GLY A 110 PHE A 111 -1 O GLY A 110 N LYS A 99 CRYST1 71.660 77.964 99.378 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013955 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012826 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010063 0.00000 MTRIX1 1 -0.931387 -0.049963 -0.360586 28.09428 1 MTRIX2 1 0.009053 -0.993409 0.114262 -3.95591 1 MTRIX3 1 -0.363919 0.103157 0.925701 5.32702 1 MTRIX1 2 -0.824626 -0.564060 0.042750 -34.11575 1 MTRIX2 2 -0.564825 0.816877 -0.116981 -9.45650 1 MTRIX3 2 0.031063 -0.120612 -0.992214 2.76575 1