data_8WW0 # _entry.id 8WW0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8WW0 pdb_00008ww0 10.2210/pdb8ww0/pdb WWPDB D_1300042117 ? ? BMRB 36605 ? 10.13018/BMR36605 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 8WW0 _pdbx_database_status.recvd_initial_deposition_date 2023-10-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'cyclic peptide with affinity for ICOS' _pdbx_database_related.db_id 36605 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email chlwu@xmu.edu.cn _pdbx_contact_author.name_first chuanliu _pdbx_contact_author.name_last wu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2946-7299 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fan, S.H.' 1 0000-0002-8179-9824 'Wu, C.L.' 2 0000-0003-2946-7299 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Combinations of Disulfide-Directing Motifs in Tandem Enabling the De-sign and Discovery of Multicyclic Peptide Binders' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Duan, Z.P.' 1 ? primary 'Wu, C.L.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description icos-1 _entity.formula_weight 3624.159 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SCPGECNCHWELFCEEGRLCTGYRHCVCPPSC _entity_poly.pdbx_seq_one_letter_code_can SCPGECNCHWELFCEEGRLCTGYRHCVCPPSC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 CYS n 1 3 PRO n 1 4 GLY n 1 5 GLU n 1 6 CYS n 1 7 ASN n 1 8 CYS n 1 9 HIS n 1 10 TRP n 1 11 GLU n 1 12 LEU n 1 13 PHE n 1 14 CYS n 1 15 GLU n 1 16 GLU n 1 17 GLY n 1 18 ARG n 1 19 LEU n 1 20 CYS n 1 21 THR n 1 22 GLY n 1 23 TYR n 1 24 ARG n 1 25 HIS n 1 26 CYS n 1 27 VAL n 1 28 CYS n 1 29 PRO n 1 30 PRO n 1 31 SER n 1 32 CYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 CYS 32 32 32 CYS CYS A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8WW0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8WW0 _struct.title 'Cyclic peptide with affinity for ICOS' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8WW0 _struct_keywords.text 'CPPC, prptide, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8WW0 _struct_ref.pdbx_db_accession 8WW0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8WW0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 32 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8WW0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 32 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 32 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 32 SG ? ? A CYS 2 A CYS 32 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 6 A CYS 28 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 8 A CYS 26 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 20 SG ? ? A CYS 14 A CYS 20 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 2 ? CYS A 32 ? CYS A 2 ? 1_555 CYS A 32 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 6 ? CYS A 28 ? CYS A 6 ? 1_555 CYS A 28 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 8 ? CYS A 26 ? CYS A 8 ? 1_555 CYS A 26 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 14 ? CYS A 20 ? CYS A 14 ? 1_555 CYS A 20 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 7 ? CYS A 14 ? ASN A 7 CYS A 14 AA1 2 CYS A 20 ? VAL A 27 ? CYS A 20 VAL A 27 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ASN _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 7 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ASN _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 7 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 27 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 27 # _pdbx_entry_details.entry_id 8WW0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 3 _pdbx_validate_close_contact.auth_atom_id_1 HD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HIS _pdbx_validate_close_contact.auth_seq_id_1 9 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 11 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 2 ARG A 18 ? ? -78.83 -167.26 2 3 GLU A 5 ? ? 70.07 -51.61 3 4 CYS A 2 ? ? -157.56 81.63 4 4 GLU A 5 ? ? 69.00 -52.71 5 5 GLU A 5 ? ? 67.74 -51.75 6 7 CYS A 2 ? ? 56.25 74.62 7 7 GLU A 5 ? ? 69.38 -60.64 8 8 CYS A 2 ? ? 62.68 89.71 9 9 CYS A 2 ? ? 62.30 86.68 10 9 PRO A 30 ? ? -69.78 3.40 11 13 CYS A 2 ? ? 63.60 89.95 12 13 GLU A 5 ? ? 68.99 -60.19 13 15 GLU A 5 ? ? 70.84 -50.20 # _pdbx_nmr_ensemble.entry_id 8WW0 _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8WW0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM icos-1, 50% perdeuterated acetonitrile and 50% H2O' _pdbx_nmr_sample_details.solvent_system '50% perdeuterated acetonitrile and 50% H2O' _pdbx_nmr_sample_details.label icos _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component icos-1 _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label condition1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-13C HSQC' 1 anisotropic 2 1 1 '2D 1H-15N HSQC' 1 anisotropic 3 1 1 '2D 1H-1H NOESY' 1 anisotropic 4 1 1 '2D 1H-1H TOCSY' 1 anisotropic # _pdbx_nmr_refine.entry_id 8WW0 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' NMRFAM-SPARKY ? 'Lee W, Tonelli M, Markley JL' 2 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 3 refinement ARIA ? ;Linge, O'Donoghue and Nilges ; 4 'peak picking' TopSpin ? 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 CYS N N N N 45 CYS CA C N R 46 CYS C C N N 47 CYS O O N N 48 CYS CB C N N 49 CYS SG S N N 50 CYS OXT O N N 51 CYS H H N N 52 CYS H2 H N N 53 CYS HA H N N 54 CYS HB2 H N N 55 CYS HB3 H N N 56 CYS HG H N N 57 CYS HXT H N N 58 GLU N N N N 59 GLU CA C N S 60 GLU C C N N 61 GLU O O N N 62 GLU CB C N N 63 GLU CG C N N 64 GLU CD C N N 65 GLU OE1 O N N 66 GLU OE2 O N N 67 GLU OXT O N N 68 GLU H H N N 69 GLU H2 H N N 70 GLU HA H N N 71 GLU HB2 H N N 72 GLU HB3 H N N 73 GLU HG2 H N N 74 GLU HG3 H N N 75 GLU HE2 H N N 76 GLU HXT H N N 77 GLY N N N N 78 GLY CA C N N 79 GLY C C N N 80 GLY O O N N 81 GLY OXT O N N 82 GLY H H N N 83 GLY H2 H N N 84 GLY HA2 H N N 85 GLY HA3 H N N 86 GLY HXT H N N 87 HIS N N N N 88 HIS CA C N S 89 HIS C C N N 90 HIS O O N N 91 HIS CB C N N 92 HIS CG C Y N 93 HIS ND1 N Y N 94 HIS CD2 C Y N 95 HIS CE1 C Y N 96 HIS NE2 N Y N 97 HIS OXT O N N 98 HIS H H N N 99 HIS H2 H N N 100 HIS HA H N N 101 HIS HB2 H N N 102 HIS HB3 H N N 103 HIS HD1 H N N 104 HIS HD2 H N N 105 HIS HE1 H N N 106 HIS HE2 H N N 107 HIS HXT H N N 108 LEU N N N N 109 LEU CA C N S 110 LEU C C N N 111 LEU O O N N 112 LEU CB C N N 113 LEU CG C N N 114 LEU CD1 C N N 115 LEU CD2 C N N 116 LEU OXT O N N 117 LEU H H N N 118 LEU H2 H N N 119 LEU HA H N N 120 LEU HB2 H N N 121 LEU HB3 H N N 122 LEU HG H N N 123 LEU HD11 H N N 124 LEU HD12 H N N 125 LEU HD13 H N N 126 LEU HD21 H N N 127 LEU HD22 H N N 128 LEU HD23 H N N 129 LEU HXT H N N 130 PHE N N N N 131 PHE CA C N S 132 PHE C C N N 133 PHE O O N N 134 PHE CB C N N 135 PHE CG C Y N 136 PHE CD1 C Y N 137 PHE CD2 C Y N 138 PHE CE1 C Y N 139 PHE CE2 C Y N 140 PHE CZ C Y N 141 PHE OXT O N N 142 PHE H H N N 143 PHE H2 H N N 144 PHE HA H N N 145 PHE HB2 H N N 146 PHE HB3 H N N 147 PHE HD1 H N N 148 PHE HD2 H N N 149 PHE HE1 H N N 150 PHE HE2 H N N 151 PHE HZ H N N 152 PHE HXT H N N 153 PRO N N N N 154 PRO CA C N S 155 PRO C C N N 156 PRO O O N N 157 PRO CB C N N 158 PRO CG C N N 159 PRO CD C N N 160 PRO OXT O N N 161 PRO H H N N 162 PRO HA H N N 163 PRO HB2 H N N 164 PRO HB3 H N N 165 PRO HG2 H N N 166 PRO HG3 H N N 167 PRO HD2 H N N 168 PRO HD3 H N N 169 PRO HXT H N N 170 SER N N N N 171 SER CA C N S 172 SER C C N N 173 SER O O N N 174 SER CB C N N 175 SER OG O N N 176 SER OXT O N N 177 SER H H N N 178 SER H2 H N N 179 SER HA H N N 180 SER HB2 H N N 181 SER HB3 H N N 182 SER HG H N N 183 SER HXT H N N 184 THR N N N N 185 THR CA C N S 186 THR C C N N 187 THR O O N N 188 THR CB C N R 189 THR OG1 O N N 190 THR CG2 C N N 191 THR OXT O N N 192 THR H H N N 193 THR H2 H N N 194 THR HA H N N 195 THR HB H N N 196 THR HG1 H N N 197 THR HG21 H N N 198 THR HG22 H N N 199 THR HG23 H N N 200 THR HXT H N N 201 TRP N N N N 202 TRP CA C N S 203 TRP C C N N 204 TRP O O N N 205 TRP CB C N N 206 TRP CG C Y N 207 TRP CD1 C Y N 208 TRP CD2 C Y N 209 TRP NE1 N Y N 210 TRP CE2 C Y N 211 TRP CE3 C Y N 212 TRP CZ2 C Y N 213 TRP CZ3 C Y N 214 TRP CH2 C Y N 215 TRP OXT O N N 216 TRP H H N N 217 TRP H2 H N N 218 TRP HA H N N 219 TRP HB2 H N N 220 TRP HB3 H N N 221 TRP HD1 H N N 222 TRP HE1 H N N 223 TRP HE3 H N N 224 TRP HZ2 H N N 225 TRP HZ3 H N N 226 TRP HH2 H N N 227 TRP HXT H N N 228 TYR N N N N 229 TYR CA C N S 230 TYR C C N N 231 TYR O O N N 232 TYR CB C N N 233 TYR CG C Y N 234 TYR CD1 C Y N 235 TYR CD2 C Y N 236 TYR CE1 C Y N 237 TYR CE2 C Y N 238 TYR CZ C Y N 239 TYR OH O N N 240 TYR OXT O N N 241 TYR H H N N 242 TYR H2 H N N 243 TYR HA H N N 244 TYR HB2 H N N 245 TYR HB3 H N N 246 TYR HD1 H N N 247 TYR HD2 H N N 248 TYR HE1 H N N 249 TYR HE2 H N N 250 TYR HH H N N 251 TYR HXT H N N 252 VAL N N N N 253 VAL CA C N S 254 VAL C C N N 255 VAL O O N N 256 VAL CB C N N 257 VAL CG1 C N N 258 VAL CG2 C N N 259 VAL OXT O N N 260 VAL H H N N 261 VAL H2 H N N 262 VAL HA H N N 263 VAL HB H N N 264 VAL HG11 H N N 265 VAL HG12 H N N 266 VAL HG13 H N N 267 VAL HG21 H N N 268 VAL HG22 H N N 269 VAL HG23 H N N 270 VAL HXT H N N 271 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 CYS N CA sing N N 43 CYS N H sing N N 44 CYS N H2 sing N N 45 CYS CA C sing N N 46 CYS CA CB sing N N 47 CYS CA HA sing N N 48 CYS C O doub N N 49 CYS C OXT sing N N 50 CYS CB SG sing N N 51 CYS CB HB2 sing N N 52 CYS CB HB3 sing N N 53 CYS SG HG sing N N 54 CYS OXT HXT sing N N 55 GLU N CA sing N N 56 GLU N H sing N N 57 GLU N H2 sing N N 58 GLU CA C sing N N 59 GLU CA CB sing N N 60 GLU CA HA sing N N 61 GLU C O doub N N 62 GLU C OXT sing N N 63 GLU CB CG sing N N 64 GLU CB HB2 sing N N 65 GLU CB HB3 sing N N 66 GLU CG CD sing N N 67 GLU CG HG2 sing N N 68 GLU CG HG3 sing N N 69 GLU CD OE1 doub N N 70 GLU CD OE2 sing N N 71 GLU OE2 HE2 sing N N 72 GLU OXT HXT sing N N 73 GLY N CA sing N N 74 GLY N H sing N N 75 GLY N H2 sing N N 76 GLY CA C sing N N 77 GLY CA HA2 sing N N 78 GLY CA HA3 sing N N 79 GLY C O doub N N 80 GLY C OXT sing N N 81 GLY OXT HXT sing N N 82 HIS N CA sing N N 83 HIS N H sing N N 84 HIS N H2 sing N N 85 HIS CA C sing N N 86 HIS CA CB sing N N 87 HIS CA HA sing N N 88 HIS C O doub N N 89 HIS C OXT sing N N 90 HIS CB CG sing N N 91 HIS CB HB2 sing N N 92 HIS CB HB3 sing N N 93 HIS CG ND1 sing Y N 94 HIS CG CD2 doub Y N 95 HIS ND1 CE1 doub Y N 96 HIS ND1 HD1 sing N N 97 HIS CD2 NE2 sing Y N 98 HIS CD2 HD2 sing N N 99 HIS CE1 NE2 sing Y N 100 HIS CE1 HE1 sing N N 101 HIS NE2 HE2 sing N N 102 HIS OXT HXT sing N N 103 LEU N CA sing N N 104 LEU N H sing N N 105 LEU N H2 sing N N 106 LEU CA C sing N N 107 LEU CA CB sing N N 108 LEU CA HA sing N N 109 LEU C O doub N N 110 LEU C OXT sing N N 111 LEU CB CG sing N N 112 LEU CB HB2 sing N N 113 LEU CB HB3 sing N N 114 LEU CG CD1 sing N N 115 LEU CG CD2 sing N N 116 LEU CG HG sing N N 117 LEU CD1 HD11 sing N N 118 LEU CD1 HD12 sing N N 119 LEU CD1 HD13 sing N N 120 LEU CD2 HD21 sing N N 121 LEU CD2 HD22 sing N N 122 LEU CD2 HD23 sing N N 123 LEU OXT HXT sing N N 124 PHE N CA sing N N 125 PHE N H sing N N 126 PHE N H2 sing N N 127 PHE CA C sing N N 128 PHE CA CB sing N N 129 PHE CA HA sing N N 130 PHE C O doub N N 131 PHE C OXT sing N N 132 PHE CB CG sing N N 133 PHE CB HB2 sing N N 134 PHE CB HB3 sing N N 135 PHE CG CD1 doub Y N 136 PHE CG CD2 sing Y N 137 PHE CD1 CE1 sing Y N 138 PHE CD1 HD1 sing N N 139 PHE CD2 CE2 doub Y N 140 PHE CD2 HD2 sing N N 141 PHE CE1 CZ doub Y N 142 PHE CE1 HE1 sing N N 143 PHE CE2 CZ sing Y N 144 PHE CE2 HE2 sing N N 145 PHE CZ HZ sing N N 146 PHE OXT HXT sing N N 147 PRO N CA sing N N 148 PRO N CD sing N N 149 PRO N H sing N N 150 PRO CA C sing N N 151 PRO CA CB sing N N 152 PRO CA HA sing N N 153 PRO C O doub N N 154 PRO C OXT sing N N 155 PRO CB CG sing N N 156 PRO CB HB2 sing N N 157 PRO CB HB3 sing N N 158 PRO CG CD sing N N 159 PRO CG HG2 sing N N 160 PRO CG HG3 sing N N 161 PRO CD HD2 sing N N 162 PRO CD HD3 sing N N 163 PRO OXT HXT sing N N 164 SER N CA sing N N 165 SER N H sing N N 166 SER N H2 sing N N 167 SER CA C sing N N 168 SER CA CB sing N N 169 SER CA HA sing N N 170 SER C O doub N N 171 SER C OXT sing N N 172 SER CB OG sing N N 173 SER CB HB2 sing N N 174 SER CB HB3 sing N N 175 SER OG HG sing N N 176 SER OXT HXT sing N N 177 THR N CA sing N N 178 THR N H sing N N 179 THR N H2 sing N N 180 THR CA C sing N N 181 THR CA CB sing N N 182 THR CA HA sing N N 183 THR C O doub N N 184 THR C OXT sing N N 185 THR CB OG1 sing N N 186 THR CB CG2 sing N N 187 THR CB HB sing N N 188 THR OG1 HG1 sing N N 189 THR CG2 HG21 sing N N 190 THR CG2 HG22 sing N N 191 THR CG2 HG23 sing N N 192 THR OXT HXT sing N N 193 TRP N CA sing N N 194 TRP N H sing N N 195 TRP N H2 sing N N 196 TRP CA C sing N N 197 TRP CA CB sing N N 198 TRP CA HA sing N N 199 TRP C O doub N N 200 TRP C OXT sing N N 201 TRP CB CG sing N N 202 TRP CB HB2 sing N N 203 TRP CB HB3 sing N N 204 TRP CG CD1 doub Y N 205 TRP CG CD2 sing Y N 206 TRP CD1 NE1 sing Y N 207 TRP CD1 HD1 sing N N 208 TRP CD2 CE2 doub Y N 209 TRP CD2 CE3 sing Y N 210 TRP NE1 CE2 sing Y N 211 TRP NE1 HE1 sing N N 212 TRP CE2 CZ2 sing Y N 213 TRP CE3 CZ3 doub Y N 214 TRP CE3 HE3 sing N N 215 TRP CZ2 CH2 doub Y N 216 TRP CZ2 HZ2 sing N N 217 TRP CZ3 CH2 sing Y N 218 TRP CZ3 HZ3 sing N N 219 TRP CH2 HH2 sing N N 220 TRP OXT HXT sing N N 221 TYR N CA sing N N 222 TYR N H sing N N 223 TYR N H2 sing N N 224 TYR CA C sing N N 225 TYR CA CB sing N N 226 TYR CA HA sing N N 227 TYR C O doub N N 228 TYR C OXT sing N N 229 TYR CB CG sing N N 230 TYR CB HB2 sing N N 231 TYR CB HB3 sing N N 232 TYR CG CD1 doub Y N 233 TYR CG CD2 sing Y N 234 TYR CD1 CE1 sing Y N 235 TYR CD1 HD1 sing N N 236 TYR CD2 CE2 doub Y N 237 TYR CD2 HD2 sing N N 238 TYR CE1 CZ doub Y N 239 TYR CE1 HE1 sing N N 240 TYR CE2 CZ sing Y N 241 TYR CE2 HE2 sing N N 242 TYR CZ OH sing N N 243 TYR OH HH sing N N 244 TYR OXT HXT sing N N 245 VAL N CA sing N N 246 VAL N H sing N N 247 VAL N H2 sing N N 248 VAL CA C sing N N 249 VAL CA CB sing N N 250 VAL CA HA sing N N 251 VAL C O doub N N 252 VAL C OXT sing N N 253 VAL CB CG1 sing N N 254 VAL CB CG2 sing N N 255 VAL CB HB sing N N 256 VAL CG1 HG11 sing N N 257 VAL CG1 HG12 sing N N 258 VAL CG1 HG13 sing N N 259 VAL CG2 HG21 sing N N 260 VAL CG2 HG22 sing N N 261 VAL CG2 HG23 sing N N 262 VAL OXT HXT sing N N 263 # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 850 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 8WW0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #