HEADER HYDROLASE/HYDROLASE INHIBITOR 01-NOV-23 8WZ0 TITLE SARS-COV-2 3CLPRO BOUND TO COVALENT INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C-LIKE PROTEINASE NSP5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3CL-PRO,3CLP,MAIN PROTEASE,MPRO,NON-STRUCTURAL PROTEIN 5, COMPND 5 NSP5,SARS CORONAVIRUS MAIN PROTEINASE; COMPND 6 EC: 3.4.22.69; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEASE INHIBITOR, COVALENT, VIRUS, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.PENG,D.SUN,X.DING REVDAT 1 07-MAY-25 8WZ0 0 JRNL AUTH J.PENG,D.SUN,X.DING JRNL TITL SARS-COV-2 3CLPRO BOUND TO COVALENT INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 981 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1417 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3300 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4716 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 16 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.03000 REMARK 3 B22 (A**2) : -1.10000 REMARK 3 B33 (A**2) : 2.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.90000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.377 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.327 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.499 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4919 ; 0.003 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4536 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6700 ; 1.266 ; 1.663 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10419 ; 1.088 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 612 ; 7.136 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;30.445 ;23.058 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 778 ;14.537 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;11.462 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 636 ; 0.041 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5651 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1175 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2448 ; 1.507 ; 4.029 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2447 ; 1.507 ; 4.028 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3060 ; 2.586 ; 6.039 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3061 ; 2.586 ; 6.040 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2471 ; 1.203 ; 4.135 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2472 ; 1.203 ; 4.135 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3641 ; 2.084 ; 6.147 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5142 ; 4.360 ;46.056 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5143 ; 4.360 ;46.057 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 9468 0.06 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8WZ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1300042136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID09 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19865 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 47.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.15100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.04700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM FLUORIDE, 20% PEG 3350, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.47000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 306 REMARK 465 GLN B 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -127.97 59.49 REMARK 500 ASN A 51 70.17 -154.47 REMARK 500 ASN A 72 42.77 -99.40 REMARK 500 ASN A 84 -117.05 56.96 REMARK 500 TYR A 154 -72.41 50.38 REMARK 500 ASP B 33 -128.54 59.78 REMARK 500 ASN B 51 71.57 -154.55 REMARK 500 ASN B 72 43.97 -99.55 REMARK 500 ASN B 84 -116.95 57.95 REMARK 500 TYR B 154 -72.03 49.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 8WZ0 A 1 306 UNP P0DTC1 R1A_SARS2 3264 3569 DBREF 8WZ0 B 1 306 UNP P0DTC1 R1A_SARS2 3264 3569 SEQRES 1 A 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 A 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 A 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 A 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 A 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 A 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 A 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 A 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 A 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 A 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 A 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 A 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 A 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 A 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 A 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 A 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 A 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 A 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 A 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 A 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 A 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 A 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 A 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 A 306 CYS SER GLY VAL THR PHE GLN SEQRES 1 B 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 B 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 B 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 B 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 B 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 B 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 B 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 B 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 B 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 B 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 B 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 B 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 B 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 B 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 B 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 B 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 B 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 B 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 B 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 B 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 B 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 B 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 B 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 B 306 CYS SER GLY VAL THR PHE GLN HET XQF A 401 35 HET XQF B 401 35 HETNAM XQF (2~{R})-~{N}-[4,4-BIS(FLUORANYL)CYCLOHEXYL]-2-[(2- HETNAM 2 XQF CHLORANYL-2-FLUORANYL-ETHANOYL)-[4- HETNAM 3 XQF (TRIFLUOROMETHYLOXY)PHENYL]AMINO]-2-PYRIMIDIN-5-YL- HETNAM 4 XQF PROPANAMIDE FORMUL 3 XQF 2(C22 H21 CL F6 N4 O3) FORMUL 5 HOH *16(H2 O) HELIX 1 AA1 SER A 10 GLY A 15 1 6 HELIX 2 AA2 HIS A 41 CYS A 44 5 4 HELIX 3 AA3 THR A 45 LEU A 50 1 6 HELIX 4 AA4 ASN A 53 LYS A 61 1 9 HELIX 5 AA5 SER A 62 HIS A 64 5 3 HELIX 6 AA6 ILE A 200 ASN A 214 1 15 HELIX 7 AA7 THR A 226 TYR A 237 1 12 HELIX 8 AA8 THR A 243 LEU A 250 1 8 HELIX 9 AA9 LEU A 250 GLY A 258 1 9 HELIX 10 AB1 ALA A 260 GLY A 275 1 16 HELIX 11 AB2 THR A 292 GLY A 302 1 11 HELIX 12 AB3 SER B 10 GLY B 15 1 6 HELIX 13 AB4 HIS B 41 CYS B 44 5 4 HELIX 14 AB5 THR B 45 LEU B 50 1 6 HELIX 15 AB6 ASN B 53 LYS B 61 1 9 HELIX 16 AB7 SER B 62 HIS B 64 5 3 HELIX 17 AB8 ILE B 200 ASN B 214 1 15 HELIX 18 AB9 THR B 226 TYR B 237 1 12 HELIX 19 AC1 THR B 243 LEU B 250 1 8 HELIX 20 AC2 LEU B 250 GLY B 258 1 9 HELIX 21 AC3 ALA B 260 GLY B 275 1 16 HELIX 22 AC4 THR B 292 GLY B 302 1 11 SHEET 1 AA1 7 GLN A 74 LEU A 75 0 SHEET 2 AA1 7 PHE A 66 GLN A 69 -1 N VAL A 68 O LEU A 75 SHEET 3 AA1 7 MET A 17 CYS A 22 -1 N THR A 21 O LEU A 67 SHEET 4 AA1 7 THR A 25 LEU A 32 -1 O GLY A 29 N VAL A 18 SHEET 5 AA1 7 VAL A 35 PRO A 39 -1 O TYR A 37 N LEU A 30 SHEET 6 AA1 7 VAL A 86 VAL A 91 -1 O LEU A 87 N CYS A 38 SHEET 7 AA1 7 VAL A 77 GLN A 83 -1 N GLN A 83 O VAL A 86 SHEET 1 AA2 5 TYR A 101 PHE A 103 0 SHEET 2 AA2 5 CYS A 156 GLU A 166 1 O PHE A 159 N LYS A 102 SHEET 3 AA2 5 VAL A 148 ASP A 153 -1 N ASN A 151 O SER A 158 SHEET 4 AA2 5 THR A 111 TYR A 118 -1 N SER A 113 O PHE A 150 SHEET 5 AA2 5 SER A 121 ALA A 129 -1 O SER A 123 N ALA A 116 SHEET 1 AA3 3 TYR A 101 PHE A 103 0 SHEET 2 AA3 3 CYS A 156 GLU A 166 1 O PHE A 159 N LYS A 102 SHEET 3 AA3 3 HIS A 172 THR A 175 -1 O ALA A 173 N MET A 165 SHEET 1 AA4 7 GLN B 74 LEU B 75 0 SHEET 2 AA4 7 PHE B 66 GLN B 69 -1 N VAL B 68 O LEU B 75 SHEET 3 AA4 7 MET B 17 CYS B 22 -1 N THR B 21 O LEU B 67 SHEET 4 AA4 7 THR B 25 LEU B 32 -1 O GLY B 29 N VAL B 18 SHEET 5 AA4 7 VAL B 35 PRO B 39 -1 O TYR B 37 N LEU B 30 SHEET 6 AA4 7 VAL B 86 VAL B 91 -1 O LEU B 87 N CYS B 38 SHEET 7 AA4 7 VAL B 77 GLN B 83 -1 N GLN B 83 O VAL B 86 SHEET 1 AA5 5 TYR B 101 PHE B 103 0 SHEET 2 AA5 5 CYS B 156 GLU B 166 1 O PHE B 159 N LYS B 102 SHEET 3 AA5 5 VAL B 148 ASP B 153 -1 N ASN B 151 O SER B 158 SHEET 4 AA5 5 THR B 111 TYR B 118 -1 N SER B 113 O PHE B 150 SHEET 5 AA5 5 SER B 121 ALA B 129 -1 O SER B 123 N ALA B 116 SHEET 1 AA6 3 TYR B 101 PHE B 103 0 SHEET 2 AA6 3 CYS B 156 GLU B 166 1 O PHE B 159 N LYS B 102 SHEET 3 AA6 3 HIS B 172 THR B 175 -1 O ALA B 173 N MET B 165 LINK SG CYS A 145 C20 XQF A 401 1555 1555 1.77 LINK SG CYS B 145 C20 XQF B 401 1555 1555 1.78 CRYST1 45.540 52.940 113.960 90.00 100.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021959 0.000000 0.004156 0.00000 SCALE2 0.000000 0.018889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008931 0.00000 TER 2359 PHE A 305 TER 4737 PHE B 305 HETATM 4738 C4 XQF A 401 -15.306 2.127 -44.163 1.00 34.86 C HETATM 4739 C5 XQF A 401 -14.800 1.765 -42.922 1.00 34.64 C HETATM 4740 C6 XQF A 401 -15.575 1.927 -41.782 1.00 34.49 C HETATM 4741 C7 XQF A 401 -16.851 2.477 -41.897 1.00 32.89 C HETATM 4742 C10 XQF A 401 -15.378 -0.811 -41.062 1.00 38.28 C HETATM 4743 C13 XQF A 401 -14.278 -0.269 -39.041 1.00 37.15 C HETATM 4744 C20 XQF A 401 -14.149 3.850 -40.316 1.00 32.98 C HETATM 4745 C26 XQF A 401 -16.778 -4.082 -41.851 1.00 42.60 C HETATM 4746 C28 XQF A 401 -17.128 -4.625 -44.280 1.00 43.19 C HETATM 4747 C1 XQF A 401 -17.065 2.258 -46.670 1.00 34.53 C HETATM 4748 C2 XQF A 401 -17.350 2.843 -43.127 1.00 33.06 C HETATM 4749 C3 XQF A 401 -16.592 2.664 -44.280 1.00 34.09 C HETATM 4750 N8 XQF A 401 -15.127 1.573 -40.489 1.00 35.73 N HETATM 4751 C9 XQF A 401 -15.415 0.218 -39.941 1.00 36.89 C HETATM 4752 N11 XQF A 401 -16.301 -1.789 -41.190 1.00 40.94 N HETATM 4753 C12 XQF A 401 -16.168 -2.754 -42.283 1.00 41.75 C HETATM 4754 C14 XQF A 401 -12.957 -0.251 -39.516 1.00 37.33 C HETATM 4755 N15 XQF A 401 -11.958 -0.671 -38.756 1.00 36.93 N HETATM 4756 C16 XQF A 401 -12.197 -1.134 -37.547 1.00 37.40 C HETATM 4757 N17 XQF A 401 -13.423 -1.186 -37.051 1.00 37.21 N HETATM 4758 C18 XQF A 401 -14.471 -0.774 -37.752 1.00 37.34 C HETATM 4759 C19 XQF A 401 -14.489 2.510 -39.745 1.00 34.05 C HETATM 4760 F22 XQF A 401 -14.093 4.824 -39.339 1.00 32.68 F HETATM 4761 C23 XQF A 401 -16.782 0.263 -39.244 1.00 36.00 C HETATM 4762 O24 XQF A 401 -14.103 2.264 -38.627 1.00 34.94 O HETATM 4763 O25 XQF A 401 -14.465 -0.800 -41.869 1.00 36.47 O HETATM 4764 C27 XQF A 401 -16.561 -5.128 -42.948 1.00 42.69 C HETATM 4765 C29 XQF A 401 -16.579 -3.242 -44.651 1.00 42.21 C HETATM 4766 C30 XQF A 401 -16.878 -2.244 -43.535 1.00 41.84 C HETATM 4767 F31 XQF A 401 -16.756 -5.528 -45.279 1.00 43.51 F HETATM 4768 F32 XQF A 401 -18.526 -4.563 -44.169 1.00 44.33 F HETATM 4769 O33 XQF A 401 -17.126 3.057 -45.478 1.00 34.06 O HETATM 4770 F34 XQF A 401 -17.864 2.826 -47.667 1.00 35.60 F HETATM 4771 F35 XQF A 401 -15.768 2.212 -47.151 1.00 34.66 F HETATM 4772 F36 XQF A 401 -17.485 0.950 -46.442 1.00 35.52 F HETATM 4773 C4 XQF B 401 23.387 1.887 -12.673 1.00 35.21 C HETATM 4774 C5 XQF B 401 22.925 1.570 -13.941 1.00 35.21 C HETATM 4775 C6 XQF B 401 23.698 1.843 -15.059 1.00 34.91 C HETATM 4776 C7 XQF B 401 24.937 2.463 -14.889 1.00 34.14 C HETATM 4777 C10 XQF B 401 23.590 -0.873 -15.915 1.00 37.51 C HETATM 4778 C13 XQF B 401 22.469 -0.237 -17.890 1.00 37.88 C HETATM 4779 C20 XQF B 401 22.297 3.824 -16.549 1.00 32.01 C HETATM 4780 C26 XQF B 401 24.939 -4.167 -15.204 1.00 38.30 C HETATM 4781 C28 XQF B 401 25.555 -4.713 -12.826 1.00 40.25 C HETATM 4782 C1 XQF B 401 25.066 1.940 -10.172 1.00 41.15 C HETATM 4783 C2 XQF B 401 25.401 2.792 -13.634 1.00 34.64 C HETATM 4784 C3 XQF B 401 24.634 2.498 -12.509 1.00 36.39 C HETATM 4785 N8 XQF B 401 23.299 1.540 -16.382 1.00 35.56 N HETATM 4786 C9 XQF B 401 23.615 0.211 -16.976 1.00 37.07 C HETATM 4787 N11 XQF B 401 24.551 -1.815 -15.780 1.00 39.51 N HETATM 4788 C12 XQF B 401 24.403 -2.821 -14.719 1.00 38.84 C HETATM 4789 C14 XQF B 401 21.147 -0.173 -17.419 1.00 37.72 C HETATM 4790 N15 XQF B 401 20.147 -0.564 -18.184 1.00 37.91 N HETATM 4791 C16 XQF B 401 20.378 -1.026 -19.399 1.00 38.03 C HETATM 4792 N17 XQF B 401 21.598 -1.120 -19.893 1.00 38.05 N HETATM 4793 C18 XQF B 401 22.654 -0.745 -19.183 1.00 38.62 C HETATM 4794 C19 XQF B 401 22.688 2.498 -17.133 1.00 33.41 C HETATM 4795 F22 XQF B 401 22.120 4.780 -17.537 1.00 30.68 F HETATM 4796 C23 XQF B 401 24.990 0.299 -17.648 1.00 36.92 C HETATM 4797 O24 XQF B 401 22.361 2.275 -18.282 1.00 33.87 O HETATM 4798 O25 XQF B 401 22.639 -0.941 -15.163 1.00 36.19 O HETATM 4799 C27 XQF B 401 24.852 -5.210 -14.091 1.00 38.67 C HETATM 4800 C29 XQF B 401 24.974 -3.369 -12.377 1.00 40.29 C HETATM 4801 C30 XQF B 401 25.160 -2.333 -13.484 1.00 39.05 C HETATM 4802 F31 XQF B 401 25.330 -5.648 -11.811 1.00 40.06 F HETATM 4803 F32 XQF B 401 26.925 -4.556 -13.093 1.00 40.92 F HETATM 4804 O33 XQF B 401 25.124 2.847 -11.282 1.00 38.79 O HETATM 4805 F34 XQF B 401 25.816 2.439 -9.103 1.00 42.59 F HETATM 4806 F35 XQF B 401 23.746 1.802 -9.746 1.00 41.53 F HETATM 4807 F36 XQF B 401 25.576 0.692 -10.530 1.00 43.96 F HETATM 4808 O HOH A 501 -15.726 7.267 -57.163 1.00 23.35 O HETATM 4809 O HOH A 502 10.809 -10.116 -37.004 1.00 28.69 O HETATM 4810 O HOH A 503 -4.225 -2.321 -47.434 1.00 26.09 O HETATM 4811 O HOH A 504 0.732 -6.139 -39.108 1.00 12.98 O HETATM 4812 O HOH A 505 -12.453 5.506 -48.075 1.00 17.02 O HETATM 4813 O HOH A 506 25.380 -9.344 -46.046 1.00 26.75 O HETATM 4814 O HOH A 507 -3.287 -11.202 -43.398 1.00 25.10 O HETATM 4815 O HOH A 508 20.277 -2.506 -41.536 1.00 43.76 O HETATM 4816 O HOH B 501 -2.488 -10.490 -19.946 1.00 33.39 O HETATM 4817 O HOH B 502 7.603 -6.704 -17.884 1.00 12.50 O HETATM 4818 O HOH B 503 12.364 -2.856 -9.522 1.00 20.64 O HETATM 4819 O HOH B 504 20.619 5.206 -8.646 1.00 20.64 O HETATM 4820 O HOH B 505 -3.529 -6.408 -12.870 1.00 29.42 O HETATM 4821 O HOH B 506 4.039 -15.909 -28.454 1.00 25.13 O HETATM 4822 O HOH B 507 -9.386 -18.807 -2.249 1.00 25.78 O HETATM 4823 O HOH B 508 28.135 -0.399 -15.757 1.00 38.49 O CONECT 1120 4744 CONECT 3479 4779 CONECT 4738 4739 4749 CONECT 4739 4738 4740 CONECT 4740 4739 4741 4750 CONECT 4741 4740 4748 CONECT 4742 4751 4752 4763 CONECT 4743 4751 4754 4758 CONECT 4744 1120 4759 4760 CONECT 4745 4753 4764 CONECT 4746 4764 4765 4767 4768 CONECT 4747 4769 4770 4771 4772 CONECT 4748 4741 4749 CONECT 4749 4738 4748 4769 CONECT 4750 4740 4751 4759 CONECT 4751 4742 4743 4750 4761 CONECT 4752 4742 4753 CONECT 4753 4745 4752 4766 CONECT 4754 4743 4755 CONECT 4755 4754 4756 CONECT 4756 4755 4757 CONECT 4757 4756 4758 CONECT 4758 4743 4757 CONECT 4759 4744 4750 4762 CONECT 4760 4744 CONECT 4761 4751 CONECT 4762 4759 CONECT 4763 4742 CONECT 4764 4745 4746 CONECT 4765 4746 4766 CONECT 4766 4753 4765 CONECT 4767 4746 CONECT 4768 4746 CONECT 4769 4747 4749 CONECT 4770 4747 CONECT 4771 4747 CONECT 4772 4747 CONECT 4773 4774 4784 CONECT 4774 4773 4775 CONECT 4775 4774 4776 4785 CONECT 4776 4775 4783 CONECT 4777 4786 4787 4798 CONECT 4778 4786 4789 4793 CONECT 4779 3479 4794 4795 CONECT 4780 4788 4799 CONECT 4781 4799 4800 4802 4803 CONECT 4782 4804 4805 4806 4807 CONECT 4783 4776 4784 CONECT 4784 4773 4783 4804 CONECT 4785 4775 4786 4794 CONECT 4786 4777 4778 4785 4796 CONECT 4787 4777 4788 CONECT 4788 4780 4787 4801 CONECT 4789 4778 4790 CONECT 4790 4789 4791 CONECT 4791 4790 4792 CONECT 4792 4791 4793 CONECT 4793 4778 4792 CONECT 4794 4779 4785 4797 CONECT 4795 4779 CONECT 4796 4786 CONECT 4797 4794 CONECT 4798 4777 CONECT 4799 4780 4781 CONECT 4800 4781 4801 CONECT 4801 4788 4800 CONECT 4802 4781 CONECT 4803 4781 CONECT 4804 4782 4784 CONECT 4805 4782 CONECT 4806 4782 CONECT 4807 4782 MASTER 283 0 2 22 30 0 0 6 4802 2 72 48 END