HEADER DNA BINDING PROTEIN 04-NOV-23 8X0A TITLE CRYSTAL STRUCTURE OF MFTR FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MYCOFACTOCIN BIOSYNTHESIS TRANSCRIPTIONAL COMPND 3 REGULATOR MFTR; COMPND 4 CHAIN: A, E, B, C, D; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MFTR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS TRANSCRIPTIONAL FACTOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.PENG,Z.H.KE,Y.LI REVDAT 1 06-NOV-24 8X0A 0 JRNL AUTH F.PENG,Z.H.KE,Y.LI JRNL TITL CRYSTAL STRUCTURE OF MFTR FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0350 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 27861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.953 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1948 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.28900 REMARK 3 B22 (A**2) : 1.69900 REMARK 3 B33 (A**2) : -1.42500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.47000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.402 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7392 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10027 ; 1.899 ; 1.632 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 913 ; 6.333 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;17.562 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1200 ;18.408 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1133 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5543 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3105 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5105 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 169 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3667 ; 5.006 ; 4.572 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4575 ; 7.504 ; 6.853 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3725 ; 5.319 ; 4.990 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5452 ; 7.814 ; 7.331 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT FILE REMARK 4 REMARK 4 8X0A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1300042385. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97902 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27862 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, AND 2 M (NH4)2SO4, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.90836 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.71500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.48628 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.90836 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.71500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 57.48628 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 73.81673 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 114.97256 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 185 REMARK 465 GLN A 186 REMARK 465 ASN E 185 REMARK 465 GLN E 186 REMARK 465 ASN B 185 REMARK 465 GLN B 186 REMARK 465 ARG C 183 REMARK 465 LEU C 184 REMARK 465 ASN C 185 REMARK 465 GLN C 186 REMARK 465 ASN D 185 REMARK 465 GLN D 186 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP D 8 NH1 ARG D 94 1.96 REMARK 500 OD1 ASN C 85 OH TYR C 155 2.13 REMARK 500 O TYR C 111 OG1 THR C 114 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY C 178 OD1 ASP C 182 2656 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 156 CD GLU A 156 OE1 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 87 CA - C - O ANGL. DEV. = -14.5 DEGREES REMARK 500 PHE A 87 CA - C - N ANGL. DEV. = 15.8 DEGREES REMARK 500 ASP A 88 N - CA - CB ANGL. DEV. = -33.8 DEGREES REMARK 500 ASP E 52 N - CA - CB ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG E 74 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG C 29 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG C 36 CB - CG - CD ANGL. DEV. = 19.2 DEGREES REMARK 500 ARG C 36 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 GLY C 51 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 ASP C 52 N - CA - CB ANGL. DEV. = 14.1 DEGREES REMARK 500 PRO C 140 CB - CA - C ANGL. DEV. = 24.1 DEGREES REMARK 500 GLN C 141 N - CA - CB ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 17 -161.39 -106.21 REMARK 500 PHE A 53 -51.75 49.43 REMARK 500 ASN A 85 60.15 -117.78 REMARK 500 GLU A 162 -5.77 84.70 REMARK 500 ASP A 182 -3.39 -50.82 REMARK 500 HIS E 17 -159.98 -106.48 REMARK 500 ASP E 52 56.60 -148.23 REMARK 500 SER E 131 -156.73 -110.64 REMARK 500 LYS E 134 96.84 105.70 REMARK 500 SER B 44 150.60 169.91 REMARK 500 ASP B 52 70.00 -100.13 REMARK 500 SER B 131 -159.62 -111.55 REMARK 500 LYS B 134 88.40 113.69 REMARK 500 MET B 139 -61.66 117.24 REMARK 500 GLN B 141 -55.07 170.27 REMARK 500 HIS C 17 -159.82 -106.53 REMARK 500 ASP C 52 55.10 -155.54 REMARK 500 SER C 131 -160.36 -112.63 REMARK 500 THR D 2 -67.11 -125.53 REMARK 500 ASP D 52 69.61 -100.32 REMARK 500 ARG D 94 46.09 -73.51 REMARK 500 HIS D 95 -68.47 -169.54 REMARK 500 LYS D 97 -91.18 56.03 REMARK 500 ARG D 98 155.10 -25.33 REMARK 500 SER D 131 -37.21 -134.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 40 0.09 SIDE CHAIN REMARK 500 ARG A 74 0.10 SIDE CHAIN REMARK 500 ARG A 78 0.17 SIDE CHAIN REMARK 500 ARG A 94 0.12 SIDE CHAIN REMARK 500 ARG A 98 0.10 SIDE CHAIN REMARK 500 ARG A 100 0.09 SIDE CHAIN REMARK 500 ARG A 130 0.09 SIDE CHAIN REMARK 500 ARG A 160 0.08 SIDE CHAIN REMARK 500 ARG E 29 0.10 SIDE CHAIN REMARK 500 ARG E 36 0.11 SIDE CHAIN REMARK 500 ARG E 40 0.17 SIDE CHAIN REMARK 500 ARG E 78 0.11 SIDE CHAIN REMARK 500 ARG E 94 0.14 SIDE CHAIN REMARK 500 ARG E 98 0.09 SIDE CHAIN REMARK 500 ARG E 100 0.09 SIDE CHAIN REMARK 500 ARG E 129 0.09 SIDE CHAIN REMARK 500 ARG B 35 0.09 SIDE CHAIN REMARK 500 ARG B 40 0.19 SIDE CHAIN REMARK 500 ARG B 94 0.15 SIDE CHAIN REMARK 500 ARG B 100 0.12 SIDE CHAIN REMARK 500 ARG B 130 0.11 SIDE CHAIN REMARK 500 ARG C 35 0.10 SIDE CHAIN REMARK 500 ARG C 40 0.16 SIDE CHAIN REMARK 500 ARG C 70 0.07 SIDE CHAIN REMARK 500 ARG C 94 0.13 SIDE CHAIN REMARK 500 ARG C 98 0.08 SIDE CHAIN REMARK 500 ARG C 100 0.09 SIDE CHAIN REMARK 500 ARG D 35 0.08 SIDE CHAIN REMARK 500 ARG D 40 0.17 SIDE CHAIN REMARK 500 ARG D 78 0.13 SIDE CHAIN REMARK 500 ARG D 100 0.19 SIDE CHAIN REMARK 500 ARG D 130 0.11 SIDE CHAIN REMARK 500 ARG D 160 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 85 -15.14 REMARK 500 THR A 86 -12.52 REMARK 500 REMARK 500 REMARK: NULL DBREF 8X0A A 1 186 UNP P9WMB7 MFTR_MYCTU 13 198 DBREF 8X0A E 1 186 UNP P9WMB7 MFTR_MYCTU 13 198 DBREF 8X0A B 1 186 UNP P9WMB7 MFTR_MYCTU 13 198 DBREF 8X0A C 1 186 UNP P9WMB7 MFTR_MYCTU 13 198 DBREF 8X0A D 1 186 UNP P9WMB7 MFTR_MYCTU 13 198 SEQRES 1 A 186 THR THR PRO HIS HIS ILE SER ASP VAL ALA ILE GLU LEU SEQRES 2 A 186 PHE ALA ALA HIS GLY PHE THR ASP VAL SER VAL ASP ASP SEQRES 3 A 186 ILE ALA ARG ALA ALA GLY ILE ALA ARG ARG THR LEU PHE SEQRES 4 A 186 ARG TYR TYR ALA SER LYS ASN ALA ILE PRO TRP GLY ASP SEQRES 5 A 186 PHE SER THR HIS LEU ALA GLN LEU GLN GLY LEU LEU ASP SEQRES 6 A 186 ASN ILE ASP SER ARG ILE GLN LEU ARG ASP ALA LEU ARG SEQRES 7 A 186 ALA ALA LEU LEU ALA PHE ASN THR PHE ASP GLU SER GLU SEQRES 8 A 186 THR ILE ARG HIS ARG LYS ARG MET ARG VAL ILE LEU GLN SEQRES 9 A 186 THR PRO GLU LEU GLN ALA TYR SER MET THR MET TYR ALA SEQRES 10 A 186 GLY TRP ARG GLU VAL ILE ALA LYS PHE VAL ALA ARG ARG SEQRES 11 A 186 SER GLY GLY LYS THR THR ASP PHE MET PRO GLN THR VAL SEQRES 12 A 186 ALA TRP THR MET LEU GLY VAL ALA LEU SER ALA TYR GLU SEQRES 13 A 186 HIS TRP LEU ARG ASP GLU SER VAL SER LEU THR GLU ALA SEQRES 14 A 186 LEU GLY ALA ALA PHE ASP VAL VAL GLY ALA GLY LEU ASP SEQRES 15 A 186 ARG LEU ASN GLN SEQRES 1 E 186 THR THR PRO HIS HIS ILE SER ASP VAL ALA ILE GLU LEU SEQRES 2 E 186 PHE ALA ALA HIS GLY PHE THR ASP VAL SER VAL ASP ASP SEQRES 3 E 186 ILE ALA ARG ALA ALA GLY ILE ALA ARG ARG THR LEU PHE SEQRES 4 E 186 ARG TYR TYR ALA SER LYS ASN ALA ILE PRO TRP GLY ASP SEQRES 5 E 186 PHE SER THR HIS LEU ALA GLN LEU GLN GLY LEU LEU ASP SEQRES 6 E 186 ASN ILE ASP SER ARG ILE GLN LEU ARG ASP ALA LEU ARG SEQRES 7 E 186 ALA ALA LEU LEU ALA PHE ASN THR PHE ASP GLU SER GLU SEQRES 8 E 186 THR ILE ARG HIS ARG LYS ARG MET ARG VAL ILE LEU GLN SEQRES 9 E 186 THR PRO GLU LEU GLN ALA TYR SER MET THR MET TYR ALA SEQRES 10 E 186 GLY TRP ARG GLU VAL ILE ALA LYS PHE VAL ALA ARG ARG SEQRES 11 E 186 SER GLY GLY LYS THR THR ASP PHE MET PRO GLN THR VAL SEQRES 12 E 186 ALA TRP THR MET LEU GLY VAL ALA LEU SER ALA TYR GLU SEQRES 13 E 186 HIS TRP LEU ARG ASP GLU SER VAL SER LEU THR GLU ALA SEQRES 14 E 186 LEU GLY ALA ALA PHE ASP VAL VAL GLY ALA GLY LEU ASP SEQRES 15 E 186 ARG LEU ASN GLN SEQRES 1 B 186 THR THR PRO HIS HIS ILE SER ASP VAL ALA ILE GLU LEU SEQRES 2 B 186 PHE ALA ALA HIS GLY PHE THR ASP VAL SER VAL ASP ASP SEQRES 3 B 186 ILE ALA ARG ALA ALA GLY ILE ALA ARG ARG THR LEU PHE SEQRES 4 B 186 ARG TYR TYR ALA SER LYS ASN ALA ILE PRO TRP GLY ASP SEQRES 5 B 186 PHE SER THR HIS LEU ALA GLN LEU GLN GLY LEU LEU ASP SEQRES 6 B 186 ASN ILE ASP SER ARG ILE GLN LEU ARG ASP ALA LEU ARG SEQRES 7 B 186 ALA ALA LEU LEU ALA PHE ASN THR PHE ASP GLU SER GLU SEQRES 8 B 186 THR ILE ARG HIS ARG LYS ARG MET ARG VAL ILE LEU GLN SEQRES 9 B 186 THR PRO GLU LEU GLN ALA TYR SER MET THR MET TYR ALA SEQRES 10 B 186 GLY TRP ARG GLU VAL ILE ALA LYS PHE VAL ALA ARG ARG SEQRES 11 B 186 SER GLY GLY LYS THR THR ASP PHE MET PRO GLN THR VAL SEQRES 12 B 186 ALA TRP THR MET LEU GLY VAL ALA LEU SER ALA TYR GLU SEQRES 13 B 186 HIS TRP LEU ARG ASP GLU SER VAL SER LEU THR GLU ALA SEQRES 14 B 186 LEU GLY ALA ALA PHE ASP VAL VAL GLY ALA GLY LEU ASP SEQRES 15 B 186 ARG LEU ASN GLN SEQRES 1 C 186 THR THR PRO HIS HIS ILE SER ASP VAL ALA ILE GLU LEU SEQRES 2 C 186 PHE ALA ALA HIS GLY PHE THR ASP VAL SER VAL ASP ASP SEQRES 3 C 186 ILE ALA ARG ALA ALA GLY ILE ALA ARG ARG THR LEU PHE SEQRES 4 C 186 ARG TYR TYR ALA SER LYS ASN ALA ILE PRO TRP GLY ASP SEQRES 5 C 186 PHE SER THR HIS LEU ALA GLN LEU GLN GLY LEU LEU ASP SEQRES 6 C 186 ASN ILE ASP SER ARG ILE GLN LEU ARG ASP ALA LEU ARG SEQRES 7 C 186 ALA ALA LEU LEU ALA PHE ASN THR PHE ASP GLU SER GLU SEQRES 8 C 186 THR ILE ARG HIS ARG LYS ARG MET ARG VAL ILE LEU GLN SEQRES 9 C 186 THR PRO GLU LEU GLN ALA TYR SER MET THR MET TYR ALA SEQRES 10 C 186 GLY TRP ARG GLU VAL ILE ALA LYS PHE VAL ALA ARG ARG SEQRES 11 C 186 SER GLY GLY LYS THR THR ASP PHE MET PRO GLN THR VAL SEQRES 12 C 186 ALA TRP THR MET LEU GLY VAL ALA LEU SER ALA TYR GLU SEQRES 13 C 186 HIS TRP LEU ARG ASP GLU SER VAL SER LEU THR GLU ALA SEQRES 14 C 186 LEU GLY ALA ALA PHE ASP VAL VAL GLY ALA GLY LEU ASP SEQRES 15 C 186 ARG LEU ASN GLN SEQRES 1 D 186 THR THR PRO HIS HIS ILE SER ASP VAL ALA ILE GLU LEU SEQRES 2 D 186 PHE ALA ALA HIS GLY PHE THR ASP VAL SER VAL ASP ASP SEQRES 3 D 186 ILE ALA ARG ALA ALA GLY ILE ALA ARG ARG THR LEU PHE SEQRES 4 D 186 ARG TYR TYR ALA SER LYS ASN ALA ILE PRO TRP GLY ASP SEQRES 5 D 186 PHE SER THR HIS LEU ALA GLN LEU GLN GLY LEU LEU ASP SEQRES 6 D 186 ASN ILE ASP SER ARG ILE GLN LEU ARG ASP ALA LEU ARG SEQRES 7 D 186 ALA ALA LEU LEU ALA PHE ASN THR PHE ASP GLU SER GLU SEQRES 8 D 186 THR ILE ARG HIS ARG LYS ARG MET ARG VAL ILE LEU GLN SEQRES 9 D 186 THR PRO GLU LEU GLN ALA TYR SER MET THR MET TYR ALA SEQRES 10 D 186 GLY TRP ARG GLU VAL ILE ALA LYS PHE VAL ALA ARG ARG SEQRES 11 D 186 SER GLY GLY LYS THR THR ASP PHE MET PRO GLN THR VAL SEQRES 12 D 186 ALA TRP THR MET LEU GLY VAL ALA LEU SER ALA TYR GLU SEQRES 13 D 186 HIS TRP LEU ARG ASP GLU SER VAL SER LEU THR GLU ALA SEQRES 14 D 186 LEU GLY ALA ALA PHE ASP VAL VAL GLY ALA GLY LEU ASP SEQRES 15 D 186 ARG LEU ASN GLN FORMUL 6 HOH *49(H2 O) HELIX 1 AA1 THR A 1 HIS A 17 1 17 HELIX 2 AA2 SER A 23 GLY A 32 1 10 HELIX 3 AA3 ALA A 34 TYR A 42 1 9 HELIX 4 AA4 ALA A 47 GLY A 51 5 5 HELIX 5 AA5 PHE A 53 ILE A 67 1 15 HELIX 6 AA6 GLN A 72 ASN A 85 1 14 HELIX 7 AA7 ASP A 88 THR A 105 1 18 HELIX 8 AA8 LEU A 108 GLY A 132 1 25 HELIX 9 AA9 ASP A 137 GLU A 162 1 26 HELIX 10 AB1 SER A 165 GLY A 180 1 16 HELIX 11 AB2 THR E 2 HIS E 17 1 16 HELIX 12 AB3 SER E 23 GLY E 32 1 10 HELIX 13 AB4 ALA E 34 TYR E 42 1 9 HELIX 14 AB5 ASP E 52 ILE E 67 1 16 HELIX 15 AB6 GLN E 72 ASN E 85 1 14 HELIX 16 AB7 ASP E 88 THR E 105 1 18 HELIX 17 AB8 LEU E 108 SER E 131 1 24 HELIX 18 AB9 ASP E 137 ASP E 161 1 25 HELIX 19 AC1 SER E 165 GLY E 180 1 16 HELIX 20 AC2 LEU E 181 LEU E 184 5 4 HELIX 21 AC3 THR B 2 GLY B 18 1 17 HELIX 22 AC4 SER B 23 GLY B 32 1 10 HELIX 23 AC5 ALA B 34 TYR B 42 1 9 HELIX 24 AC6 ALA B 47 GLY B 51 5 5 HELIX 25 AC7 ASP B 52 ILE B 67 1 16 HELIX 26 AC8 GLN B 72 ASN B 85 1 14 HELIX 27 AC9 ASP B 88 SER B 90 5 3 HELIX 28 AD1 GLU B 91 THR B 105 1 15 HELIX 29 AD2 LEU B 108 SER B 131 1 24 HELIX 30 AD3 GLN B 141 ASP B 161 1 21 HELIX 31 AD4 SER B 165 GLY B 180 1 16 HELIX 32 AD5 LEU B 181 LEU B 184 5 4 HELIX 33 AD6 THR C 2 HIS C 17 1 16 HELIX 34 AD7 SER C 23 GLY C 32 1 10 HELIX 35 AD8 ALA C 34 TYR C 42 1 9 HELIX 36 AD9 ASP C 52 ASN C 66 1 15 HELIX 37 AE1 GLN C 72 ASN C 85 1 14 HELIX 38 AE2 ASP C 88 THR C 105 1 18 HELIX 39 AE3 LEU C 108 SER C 131 1 24 HELIX 40 AE4 ASP C 137 ASP C 161 1 25 HELIX 41 AE5 SER C 165 GLY C 180 1 16 HELIX 42 AE6 THR D 2 ALA D 15 1 14 HELIX 43 AE7 GLY D 18 VAL D 22 5 5 HELIX 44 AE8 SER D 23 GLY D 32 1 10 HELIX 45 AE9 ALA D 34 TYR D 42 1 9 HELIX 46 AF1 ASP D 52 ASN D 66 1 15 HELIX 47 AF2 GLN D 72 ALA D 83 1 12 HELIX 48 AF3 ASP D 88 ARG D 94 1 7 HELIX 49 AF4 ARG D 100 THR D 105 1 6 HELIX 50 AF5 LEU D 108 GLY D 132 1 25 HELIX 51 AF6 ASP D 137 ASP D 161 1 25 HELIX 52 AF7 SER D 165 GLY D 180 1 16 HELIX 53 AF8 LEU D 181 LEU D 184 5 4 CRYST1 109.750 81.430 120.457 90.00 107.36 90.00 I 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009112 0.000000 0.002848 0.00000 SCALE2 0.000000 0.012280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008698 0.00000