HEADER VIRAL PROTEIN/IMMUNE SYSTEM 06-NOV-23 8X0Y TITLE CRYSTAL STRUCTURE OF JM-1A IN COMPLEX WITH SARS-COV-2 RBD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEAVY CHAIN OF JM-1A FAB; COMPND 7 CHAIN: E, G; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: LIGHT CHAIN OF JM-1A FAB; COMPND 11 CHAIN: F, I; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_ATCC_NUMBER: HEK293E; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: EXPICHO; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: EXPICHO KEYWDS ANTIBODY, BROAD NEUTRALIZATION, CLASS 1/2, OMICRON VARIANTS, VACCINE, KEYWDS 2 VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.MOHAPATRA,X.CHEN REVDAT 3 03-JUL-24 8X0Y 1 JRNL REVDAT 2 26-JUN-24 8X0Y 1 JRNL REVDAT 1 05-JUN-24 8X0Y 0 JRNL AUTH X.CHEN,A.MOHAPATRA,H.T.V.NGUYEN,L.SCHIMANSKI,T.KIT TAN, JRNL AUTH 2 P.RIJAL,C.P.CHEN,S.H.CHENG,W.H.LEE,Y.C.CHOU,A.R.TOWNSEND, JRNL AUTH 3 C.MA,K.A.HUANG JRNL TITL THE PRESENCE OF BROADLY NEUTRALIZING ANTI-SARS-COV-2 RBD JRNL TITL 2 ANTIBODIES ELICITED BY PRIMARY SERIES AND BOOSTER DOSE OF JRNL TITL 3 COVID-19 VACCINE. JRNL REF PLOS PATHOG. V. 20 12246 2024 JRNL REFN ESSN 1553-7374 JRNL PMID 38857264 JRNL DOI 10.1371/JOURNAL.PPAT.1012246 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 98881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9200 - 5.9800 1.00 3228 153 0.1648 0.1862 REMARK 3 2 5.9700 - 4.7600 1.00 3160 164 0.1526 0.1566 REMARK 3 3 4.7600 - 4.1700 1.00 3154 160 0.1337 0.1518 REMARK 3 4 4.1700 - 3.7900 1.00 3164 169 0.1513 0.1736 REMARK 3 5 3.7900 - 3.5200 1.00 3155 148 0.1534 0.1717 REMARK 3 6 3.5200 - 3.3100 1.00 3138 168 0.1680 0.1840 REMARK 3 7 3.3100 - 3.1500 1.00 3110 156 0.1748 0.1879 REMARK 3 8 3.1500 - 3.0100 1.00 3173 178 0.1882 0.1972 REMARK 3 9 3.0100 - 2.9000 1.00 3114 165 0.2051 0.2354 REMARK 3 10 2.9000 - 2.8000 1.00 3147 163 0.2061 0.2404 REMARK 3 11 2.8000 - 2.7100 1.00 3117 166 0.2094 0.2384 REMARK 3 12 2.7100 - 2.6300 1.00 3119 198 0.2153 0.2777 REMARK 3 13 2.6300 - 2.5600 1.00 3132 149 0.2114 0.2474 REMARK 3 14 2.5600 - 2.5000 1.00 3129 170 0.2149 0.2627 REMARK 3 15 2.5000 - 2.4400 1.00 3125 168 0.2186 0.2544 REMARK 3 16 2.4400 - 2.3900 1.00 3139 147 0.2256 0.2536 REMARK 3 17 2.3900 - 2.3400 1.00 3099 174 0.2244 0.2830 REMARK 3 18 2.3400 - 2.3000 1.00 3130 155 0.2328 0.2917 REMARK 3 19 2.3000 - 2.2600 1.00 3153 176 0.2326 0.2986 REMARK 3 20 2.2600 - 2.2200 1.00 3076 177 0.2306 0.2692 REMARK 3 21 2.2200 - 2.1800 1.00 3124 144 0.2325 0.2725 REMARK 3 22 2.1800 - 2.1500 1.00 3165 166 0.2389 0.2777 REMARK 3 23 2.1500 - 2.1200 1.00 3089 158 0.2399 0.2671 REMARK 3 24 2.1200 - 2.0900 1.00 3117 177 0.2530 0.2868 REMARK 3 25 2.0900 - 2.0600 1.00 3134 174 0.2687 0.3132 REMARK 3 26 2.0600 - 2.0300 1.00 3077 188 0.2709 0.3353 REMARK 3 27 2.0300 - 2.0100 1.00 3129 151 0.2868 0.3063 REMARK 3 28 2.0100 - 1.9900 1.00 3074 177 0.2975 0.3324 REMARK 3 29 1.9900 - 1.9600 1.00 3166 180 0.3001 0.3719 REMARK 3 30 1.9600 - 1.9400 1.00 3089 136 0.3150 0.3725 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9824 REMARK 3 ANGLE : 1.032 13381 REMARK 3 CHIRALITY : 0.060 1508 REMARK 3 PLANARITY : 0.008 1709 REMARK 3 DIHEDRAL : 14.296 3488 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8X0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1300042413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98913 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 19.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M LITHIUM CHLORIDE, 0.1M CITRATE PH REMARK 280 4.0, 20% (W/V) POLYETHYLENE GLYCOL 6000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 74.17950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 74.17950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 53.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G, I, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH F 505 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS B 519 REMARK 465 THR A 333 REMARK 465 LEU A 518 REMARK 465 HIS A 519 REMARK 465 ALA A 520 REMARK 465 SER G 218 REMARK 465 CYS G 219 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 517 CG CD1 CD2 REMARK 470 LEU B 518 CG CD1 CD2 REMARK 470 LYS B 528 CG CD CE NZ REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 ASN A 448 CG OD1 ND2 REMARK 470 TYR A 449 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 516 CG CD OE1 OE2 REMARK 470 LEU A 517 CG CD1 CD2 REMARK 470 LYS A 528 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 441 O HOH E 449 1.82 REMARK 500 O HOH I 409 O HOH I 449 1.83 REMARK 500 O HOH E 310 O HOH E 418 1.86 REMARK 500 O HOH E 308 O HOH E 429 1.91 REMARK 500 OE1 GLN G 78 O HOH G 301 1.92 REMARK 500 O HOH E 460 O HOH E 461 1.97 REMARK 500 O HOH E 451 O HOH E 457 1.97 REMARK 500 O HOH I 403 O HOH I 457 1.98 REMARK 500 NE2 GLN F 27 O HOH F 401 1.98 REMARK 500 O HOH B 747 O HOH A 686 1.99 REMARK 500 O HOH B 702 O HOH B 852 1.99 REMARK 500 O HOH B 743 O HOH B 860 2.03 REMARK 500 O HOH B 793 O HOH B 824 2.03 REMARK 500 O HOH E 458 O HOH E 460 2.04 REMARK 500 O HOH I 433 O HOH I 454 2.04 REMARK 500 O HOH B 880 O HOH B 888 2.05 REMARK 500 O HOH E 336 O HOH E 434 2.06 REMARK 500 OE1 GLN F 123 O HOH F 402 2.07 REMARK 500 O PHE B 486 O HOH B 701 2.07 REMARK 500 O HOH F 548 O HOH F 561 2.07 REMARK 500 O HOH I 382 O HOH I 393 2.08 REMARK 500 O HOH I 451 O HOH I 453 2.09 REMARK 500 CL CL B 601 O HOH B 882 2.10 REMARK 500 O HOH G 375 O HOH G 417 2.10 REMARK 500 O HOH G 424 O HOH I 427 2.12 REMARK 500 O HOH E 353 O HOH E 421 2.13 REMARK 500 O HOH E 376 O HOH E 454 2.15 REMARK 500 O HOH G 329 O HOH G 360 2.16 REMARK 500 NE2 GLN G 108 O HOH G 302 2.16 REMARK 500 O HOH G 433 O HOH G 463 2.17 REMARK 500 O HOH B 730 O HOH I 353 2.17 REMARK 500 O HOH F 500 O HOH F 546 2.17 REMARK 500 O HOH B 843 O HOH B 853 2.17 REMARK 500 OD1 ASN G 59 O HOH G 303 2.18 REMARK 500 O HOH B 830 O HOH B 846 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH F 577 O HOH A 736 4446 2.05 REMARK 500 OD1 ASN A 334 OG1 THR G 196 4445 2.11 REMARK 500 O HOH B 799 O HOH B 800 2555 2.13 REMARK 500 NZ LYS F 187 O SER I 155 2546 2.17 REMARK 500 O HOH F 544 O HOH I 411 2556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU G 181 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 388 3.30 -67.62 REMARK 500 ASN B 422 -56.10 -126.19 REMARK 500 ASN B 448 113.54 -12.79 REMARK 500 SER E 15 -8.16 77.66 REMARK 500 LYS E 132 30.66 -68.04 REMARK 500 SER E 133 -149.95 -69.02 REMARK 500 ASP E 147 61.53 69.75 REMARK 500 SER F 30 -129.19 52.78 REMARK 500 ALA F 51 -47.24 72.50 REMARK 500 SER F 93 -131.38 -149.41 REMARK 500 ASN A 388 6.89 -68.93 REMARK 500 ASN A 422 -54.23 -125.99 REMARK 500 SER G 15 -9.02 76.07 REMARK 500 SER G 30 42.79 -82.40 REMARK 500 ARG G 44 -152.71 -96.21 REMARK 500 ASP G 147 63.79 67.15 REMARK 500 LEU G 192 -51.46 -122.83 REMARK 500 SER I 30 -129.93 54.28 REMARK 500 ALA I 51 -46.79 72.45 REMARK 500 SER I 93 -128.21 -147.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 460 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH E 461 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH E 462 DISTANCE = 7.50 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 PO4 F 301 DBREF 8X0Y B 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 DBREF 8X0Y E 1 219 PDB 8X0Y 8X0Y 1 219 DBREF 8X0Y F 1 212 PDB 8X0Y 8X0Y 1 212 DBREF 8X0Y A 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 DBREF 8X0Y G 1 219 PDB 8X0Y 8X0Y 1 219 DBREF 8X0Y I 1 212 PDB 8X0Y 8X0Y 1 212 SEQRES 1 B 196 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 B 196 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 B 196 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 B 196 ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 B 196 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 B 196 ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE SEQRES 7 B 196 ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR SEQRES 8 B 196 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 B 196 ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 B 196 ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 B 196 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 B 196 GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS SEQRES 13 B 196 TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN SEQRES 14 B 196 GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 B 196 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 B 196 LYS SEQRES 1 E 219 PCA VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 E 219 PRO SER GLY THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 E 219 ALA SER ILE SER SER GLY ASP TRP TRP SER TRP VAL ARG SEQRES 4 E 219 GLN SER PRO GLY ARG GLY LEU GLU TRP ILE GLY GLY ILE SEQRES 5 E 219 PHE HIS SER GLY THR THR ASN TYR SER PRO SER LEU LYS SEQRES 6 E 219 SER ARG VAL THR MET SER VAL ASP GLN PRO LYS ASN GLN SEQRES 7 E 219 PHE SER LEU HIS LEU THR SER VAL THR ALA ALA ASP THR SEQRES 8 E 219 ALA VAL TYR TYR CYS ALA ARG MET ARG GLY ILE PHE ASP SEQRES 9 E 219 TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 10 E 219 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 E 219 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 E 219 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 E 219 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 E 219 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 E 219 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 E 219 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 E 219 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 F 212 ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SER VAL SEQRES 2 F 212 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 F 212 GLN ALA ILE SER ASN SER LEU ALA TRP TYR GLN GLN LYS SEQRES 4 F 212 PRO GLY LYS ALA PRO LYS LEU LEU LEU TYR ALA ALA SER SEQRES 5 F 212 THR LEU GLU SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 F 212 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 F 212 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN HIS TYR SEQRES 8 F 212 TYR SER THR PRO PHE PHE GLY GLY GLY THR LYS VAL GLU SEQRES 9 F 212 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 F 212 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 F 212 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 F 212 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 F 212 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 F 212 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 F 212 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 F 212 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 F 212 ASN ARG GLY GLU SEQRES 1 A 196 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 A 196 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 A 196 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 A 196 ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 A 196 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 A 196 ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE SEQRES 7 A 196 ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR SEQRES 8 A 196 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 A 196 ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 A 196 ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 A 196 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 A 196 GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS SEQRES 13 A 196 TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN SEQRES 14 A 196 GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 A 196 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 A 196 LYS SEQRES 1 G 219 PCA VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 G 219 PRO SER GLY THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 G 219 ALA SER ILE SER SER GLY ASP TRP TRP SER TRP VAL ARG SEQRES 4 G 219 GLN SER PRO GLY ARG GLY LEU GLU TRP ILE GLY GLY ILE SEQRES 5 G 219 PHE HIS SER GLY THR THR ASN TYR SER PRO SER LEU LYS SEQRES 6 G 219 SER ARG VAL THR MET SER VAL ASP GLN PRO LYS ASN GLN SEQRES 7 G 219 PHE SER LEU HIS LEU THR SER VAL THR ALA ALA ASP THR SEQRES 8 G 219 ALA VAL TYR TYR CYS ALA ARG MET ARG GLY ILE PHE ASP SEQRES 9 G 219 TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 10 G 219 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 G 219 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 G 219 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 G 219 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 G 219 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 G 219 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 G 219 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 G 219 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 I 212 ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SER VAL SEQRES 2 I 212 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 I 212 GLN ALA ILE SER ASN SER LEU ALA TRP TYR GLN GLN LYS SEQRES 4 I 212 PRO GLY LYS ALA PRO LYS LEU LEU LEU TYR ALA ALA SER SEQRES 5 I 212 THR LEU GLU SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 I 212 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 I 212 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN HIS TYR SEQRES 8 I 212 TYR SER THR PRO PHE PHE GLY GLY GLY THR LYS VAL GLU SEQRES 9 I 212 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 I 212 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 I 212 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 I 212 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 I 212 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 I 212 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 I 212 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 I 212 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 I 212 ASN ARG GLY GLU HET PCA E 1 8 HET PCA G 1 8 HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET NAG D 1 14 HET NAG D 2 14 HET FUC D 3 10 HET CL B 601 1 HET PO4 F 301 5 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 2 PCA 2(C5 H7 N O3) FORMUL 7 NAG 4(C8 H15 N O6) FORMUL 7 FUC 2(C6 H12 O5) FORMUL 9 CL CL 1- FORMUL 10 PO4 O4 P 3- FORMUL 11 HOH *1042(H2 O) HELIX 1 AA1 PHE B 338 ASN B 343 1 6 HELIX 2 AA2 SER B 349 TRP B 353 5 5 HELIX 3 AA3 TYR B 365 ASN B 370 1 6 HELIX 4 AA4 THR B 385 ASP B 389 5 5 HELIX 5 AA5 ASP B 405 ILE B 410 5 6 HELIX 6 AA6 GLY B 416 ASN B 422 1 7 HELIX 7 AA7 SER B 438 SER B 443 1 6 HELIX 8 AA8 GLY B 502 TYR B 505 5 4 HELIX 9 AA9 LEU E 64 SER E 66 5 3 HELIX 10 AB1 THR E 87 THR E 91 5 5 HELIX 11 AB2 SER E 159 ALA E 161 5 3 HELIX 12 AB3 SER E 190 THR E 194 5 5 HELIX 13 AB4 LYS E 204 ASN E 207 5 4 HELIX 14 AB5 GLN F 79 PHE F 83 5 5 HELIX 15 AB6 SER F 120 SER F 126 1 7 HELIX 16 AB7 LYS F 182 LYS F 187 1 6 HELIX 17 AB8 PRO A 337 ASN A 343 1 7 HELIX 18 AB9 SER A 349 TRP A 353 5 5 HELIX 19 AC1 TYR A 365 ASN A 370 1 6 HELIX 20 AC2 SER A 383 ASP A 389 5 7 HELIX 21 AC3 ASP A 405 ILE A 410 5 6 HELIX 22 AC4 GLY A 416 ASN A 422 1 7 HELIX 23 AC5 SER A 438 SER A 443 1 6 HELIX 24 AC6 GLY A 502 TYR A 505 5 4 HELIX 25 AC7 LEU G 64 SER G 66 5 3 HELIX 26 AC8 THR G 87 THR G 91 5 5 HELIX 27 AC9 SER G 159 ALA G 161 5 3 HELIX 28 AD1 LYS G 204 ASN G 207 5 4 HELIX 29 AD2 GLN I 79 PHE I 83 5 5 HELIX 30 AD3 SER I 120 SER I 126 1 7 HELIX 31 AD4 LYS I 182 LYS I 187 1 6 SHEET 1 AA1 5 ASN B 354 ILE B 358 0 SHEET 2 AA1 5 ASN B 394 ARG B 403 -1 O VAL B 395 N ILE B 358 SHEET 3 AA1 5 PRO B 507 GLU B 516 -1 O TYR B 508 N ILE B 402 SHEET 4 AA1 5 GLY B 431 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA1 5 THR B 376 TYR B 380 -1 N LYS B 378 O VAL B 433 SHEET 1 AA2 3 CYS B 361 VAL B 362 0 SHEET 2 AA2 3 VAL B 524 CYS B 525 1 O CYS B 525 N CYS B 361 SHEET 3 AA2 3 CYS B 391 PHE B 392 -1 N PHE B 392 O VAL B 524 SHEET 1 AA3 2 LEU B 452 ARG B 454 0 SHEET 2 AA3 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA4 2 TYR B 473 GLN B 474 0 SHEET 2 AA4 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AA5 4 GLN E 3 SER E 7 0 SHEET 2 AA5 4 LEU E 18 SER E 25 -1 O ALA E 23 N GLN E 5 SHEET 3 AA5 4 GLN E 78 LEU E 83 -1 O PHE E 79 N CYS E 22 SHEET 4 AA5 4 VAL E 68 ASP E 73 -1 N ASP E 73 O GLN E 78 SHEET 1 AA6 6 LEU E 11 VAL E 12 0 SHEET 2 AA6 6 THR E 110 VAL E 114 1 O THR E 113 N VAL E 12 SHEET 3 AA6 6 ALA E 92 MET E 99 -1 N ALA E 92 O VAL E 112 SHEET 4 AA6 6 TRP E 34 SER E 41 -1 N TRP E 34 O MET E 99 SHEET 5 AA6 6 GLY E 45 ILE E 52 -1 O GLU E 47 N ARG E 39 SHEET 6 AA6 6 THR E 58 TYR E 60 -1 O ASN E 59 N GLY E 51 SHEET 1 AA7 4 LEU E 11 VAL E 12 0 SHEET 2 AA7 4 THR E 110 VAL E 114 1 O THR E 113 N VAL E 12 SHEET 3 AA7 4 ALA E 92 MET E 99 -1 N ALA E 92 O VAL E 112 SHEET 4 AA7 4 PHE E 103 TRP E 106 -1 O TYR E 105 N ARG E 98 SHEET 1 AA8 4 SER E 123 LEU E 127 0 SHEET 2 AA8 4 THR E 138 TYR E 148 -1 O GLY E 142 N LEU E 127 SHEET 3 AA8 4 TYR E 179 PRO E 188 -1 O TYR E 179 N TYR E 148 SHEET 4 AA8 4 VAL E 166 THR E 168 -1 N HIS E 167 O VAL E 184 SHEET 1 AA9 4 SER E 123 LEU E 127 0 SHEET 2 AA9 4 THR E 138 TYR E 148 -1 O GLY E 142 N LEU E 127 SHEET 3 AA9 4 TYR E 179 PRO E 188 -1 O TYR E 179 N TYR E 148 SHEET 4 AA9 4 VAL E 172 LEU E 173 -1 N VAL E 172 O SER E 180 SHEET 1 AB1 3 THR E 154 TRP E 157 0 SHEET 2 AB1 3 ILE E 198 HIS E 203 -1 O ASN E 200 N SER E 156 SHEET 3 AB1 3 THR E 208 LYS E 213 -1 O VAL E 210 N VAL E 201 SHEET 1 AB2 4 LEU F 4 SER F 7 0 SHEET 2 AB2 4 VAL F 19 ALA F 25 -1 O ARG F 24 N THR F 5 SHEET 3 AB2 4 ASP F 70 ILE F 75 -1 O LEU F 73 N ILE F 21 SHEET 4 AB2 4 PHE F 62 SER F 67 -1 N SER F 63 O THR F 74 SHEET 1 AB3 6 SER F 10 SER F 14 0 SHEET 2 AB3 6 THR F 101 LYS F 106 1 O GLU F 104 N LEU F 11 SHEET 3 AB3 6 ALA F 84 HIS F 90 -1 N ALA F 84 O VAL F 103 SHEET 4 AB3 6 LEU F 33 GLN F 38 -1 N ALA F 34 O GLN F 89 SHEET 5 AB3 6 LYS F 45 TYR F 49 -1 O LEU F 47 N TRP F 35 SHEET 6 AB3 6 THR F 53 LEU F 54 -1 O THR F 53 N TYR F 49 SHEET 1 AB4 4 SER F 10 SER F 14 0 SHEET 2 AB4 4 THR F 101 LYS F 106 1 O GLU F 104 N LEU F 11 SHEET 3 AB4 4 ALA F 84 HIS F 90 -1 N ALA F 84 O VAL F 103 SHEET 4 AB4 4 PHE F 96 PHE F 97 -1 O PHE F 96 N HIS F 90 SHEET 1 AB5 4 SER F 113 PHE F 117 0 SHEET 2 AB5 4 THR F 128 PHE F 138 -1 O LEU F 134 N PHE F 115 SHEET 3 AB5 4 TYR F 172 SER F 181 -1 O LEU F 178 N VAL F 131 SHEET 4 AB5 4 SER F 158 VAL F 162 -1 N GLN F 159 O THR F 177 SHEET 1 AB6 4 ALA F 152 LEU F 153 0 SHEET 2 AB6 4 LYS F 144 VAL F 149 -1 N VAL F 149 O ALA F 152 SHEET 3 AB6 4 VAL F 190 THR F 196 -1 O GLU F 194 N GLN F 146 SHEET 4 AB6 4 VAL F 204 ASN F 209 -1 O VAL F 204 N VAL F 195 SHEET 1 AB7 4 ASN A 354 ILE A 358 0 SHEET 2 AB7 4 CYS A 391 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AB7 4 ALA A 522 CYS A 525 -1 O VAL A 524 N PHE A 392 SHEET 4 AB7 4 CYS A 361 VAL A 362 1 N CYS A 361 O THR A 523 SHEET 1 AB8 5 ASN A 354 ILE A 358 0 SHEET 2 AB8 5 CYS A 391 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AB8 5 PRO A 507 LEU A 517 -1 O TYR A 508 N ILE A 402 SHEET 4 AB8 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AB8 5 THR A 376 TYR A 380 -1 N LYS A 378 O VAL A 433 SHEET 1 AB9 2 LEU A 452 ARG A 454 0 SHEET 2 AB9 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AC1 2 TYR A 473 GLN A 474 0 SHEET 2 AC1 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AC2 4 GLN G 3 SER G 7 0 SHEET 2 AC2 4 LEU G 18 SER G 25 -1 O ALA G 23 N GLN G 5 SHEET 3 AC2 4 GLN G 78 LEU G 83 -1 O PHE G 79 N CYS G 22 SHEET 4 AC2 4 VAL G 68 ASP G 73 -1 N ASP G 73 O GLN G 78 SHEET 1 AC3 6 LEU G 11 VAL G 12 0 SHEET 2 AC3 6 THR G 110 VAL G 114 1 O THR G 113 N VAL G 12 SHEET 3 AC3 6 ALA G 92 MET G 99 -1 N ALA G 92 O VAL G 112 SHEET 4 AC3 6 TRP G 34 GLN G 40 -1 N TRP G 34 O MET G 99 SHEET 5 AC3 6 LEU G 46 ILE G 52 -1 O ILE G 52 N TRP G 35 SHEET 6 AC3 6 THR G 58 TYR G 60 -1 O ASN G 59 N GLY G 51 SHEET 1 AC4 4 LEU G 11 VAL G 12 0 SHEET 2 AC4 4 THR G 110 VAL G 114 1 O THR G 113 N VAL G 12 SHEET 3 AC4 4 ALA G 92 MET G 99 -1 N ALA G 92 O VAL G 112 SHEET 4 AC4 4 PHE G 103 TRP G 106 -1 O TYR G 105 N ARG G 98 SHEET 1 AC5 4 SER G 123 LEU G 127 0 SHEET 2 AC5 4 ALA G 139 TYR G 148 -1 O LEU G 144 N PHE G 125 SHEET 3 AC5 4 TYR G 179 VAL G 187 -1 O LEU G 181 N VAL G 145 SHEET 4 AC5 4 VAL G 166 THR G 168 -1 N HIS G 167 O VAL G 184 SHEET 1 AC6 4 SER G 123 LEU G 127 0 SHEET 2 AC6 4 ALA G 139 TYR G 148 -1 O LEU G 144 N PHE G 125 SHEET 3 AC6 4 TYR G 179 VAL G 187 -1 O LEU G 181 N VAL G 145 SHEET 4 AC6 4 VAL G 172 LEU G 173 -1 N VAL G 172 O SER G 180 SHEET 1 AC7 3 THR G 154 TRP G 157 0 SHEET 2 AC7 3 ILE G 198 HIS G 203 -1 O ASN G 200 N SER G 156 SHEET 3 AC7 3 THR G 208 LYS G 213 -1 O VAL G 210 N VAL G 201 SHEET 1 AC8 4 LEU I 4 SER I 7 0 SHEET 2 AC8 4 VAL I 19 ALA I 25 -1 O ARG I 24 N THR I 5 SHEET 3 AC8 4 ASP I 70 ILE I 75 -1 O ILE I 75 N VAL I 19 SHEET 4 AC8 4 PHE I 62 SER I 67 -1 N SER I 63 O THR I 74 SHEET 1 AC9 6 SER I 10 SER I 14 0 SHEET 2 AC9 6 THR I 101 LYS I 106 1 O GLU I 104 N LEU I 11 SHEET 3 AC9 6 ALA I 84 HIS I 90 -1 N ALA I 84 O VAL I 103 SHEET 4 AC9 6 LEU I 33 GLN I 38 -1 N ALA I 34 O GLN I 89 SHEET 5 AC9 6 LYS I 45 TYR I 49 -1 O LEU I 47 N TRP I 35 SHEET 6 AC9 6 THR I 53 LEU I 54 -1 O THR I 53 N TYR I 49 SHEET 1 AD1 4 SER I 10 SER I 14 0 SHEET 2 AD1 4 THR I 101 LYS I 106 1 O GLU I 104 N LEU I 11 SHEET 3 AD1 4 ALA I 84 HIS I 90 -1 N ALA I 84 O VAL I 103 SHEET 4 AD1 4 PHE I 96 PHE I 97 -1 O PHE I 96 N HIS I 90 SHEET 1 AD2 4 SER I 113 PHE I 117 0 SHEET 2 AD2 4 THR I 128 PHE I 138 -1 O ASN I 136 N SER I 113 SHEET 3 AD2 4 TYR I 172 SER I 181 -1 O LEU I 180 N ALA I 129 SHEET 4 AD2 4 SER I 158 VAL I 162 -1 N SER I 161 O SER I 175 SHEET 1 AD3 4 ALA I 152 LEU I 153 0 SHEET 2 AD3 4 ALA I 143 VAL I 149 -1 N VAL I 149 O ALA I 152 SHEET 3 AD3 4 VAL I 190 HIS I 197 -1 O GLU I 194 N GLN I 146 SHEET 4 AD3 4 VAL I 204 ASN I 209 -1 O VAL I 204 N VAL I 195 SSBOND 1 CYS B 336 CYS B 361 1555 1555 2.03 SSBOND 2 CYS B 379 CYS B 432 1555 1555 2.06 SSBOND 3 CYS B 391 CYS B 525 1555 1555 2.05 SSBOND 4 CYS B 480 CYS B 488 1555 1555 2.08 SSBOND 5 CYS E 22 CYS E 96 1555 1555 2.11 SSBOND 6 CYS E 143 CYS E 199 1555 1555 2.04 SSBOND 7 CYS F 23 CYS F 88 1555 1555 2.09 SSBOND 8 CYS F 133 CYS F 193 1555 1555 2.07 SSBOND 9 CYS A 336 CYS A 361 1555 1555 2.05 SSBOND 10 CYS A 379 CYS A 432 1555 1555 2.07 SSBOND 11 CYS A 391 CYS A 525 1555 1555 2.04 SSBOND 12 CYS A 480 CYS A 488 1555 1555 2.06 SSBOND 13 CYS G 22 CYS G 96 1555 1555 2.08 SSBOND 14 CYS G 143 CYS G 199 1555 1555 2.03 SSBOND 15 CYS I 23 CYS I 88 1555 1555 2.08 SSBOND 16 CYS I 133 CYS I 193 1555 1555 2.03 LINK ND2 ASN B 343 C1 NAG C 1 1555 1555 1.44 LINK C PCA E 1 N VAL E 2 1555 1555 1.33 LINK ND2 ASN A 343 C1 NAG D 1 1555 1555 1.45 LINK C PCA G 1 N VAL G 2 1555 1555 1.33 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.42 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.42 LINK O6 NAG D 1 C1 FUC D 3 1555 1555 1.45 CISPEP 1 PHE E 149 PRO E 150 0 -12.08 CISPEP 2 GLU E 151 PRO E 152 0 0.17 CISPEP 3 SER F 7 PRO F 8 0 -4.88 CISPEP 4 TYR F 139 PRO F 140 0 0.97 CISPEP 5 PHE G 149 PRO G 150 0 -9.26 CISPEP 6 GLU G 151 PRO G 152 0 1.96 CISPEP 7 SER I 7 PRO I 8 0 -7.13 CISPEP 8 TYR I 139 PRO I 140 0 0.41 CRYST1 148.359 107.030 87.340 90.00 100.75 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006740 0.000000 0.001280 0.00000 SCALE2 0.000000 0.009343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011654 0.00000