HEADER TRANSFERASE 12-NOV-23 8X36 TITLE NERYL DIPHOSPHATE SYNTHASE FROM SOLANUM LYCOPERSICUM COMPLEXED WITH TITLE 2 DMSAPP, IPP, AND MAGNESIUM ION (FORM B) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NERYL-DIPHOSPHATE SYNTHASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIMETHYLALLYLCISTRANSFERASE CPT1, CHLOROPLASTIC, CIS- COMPND 5 PRENYLTRANSFERASE 1,SLCPT1; COMPND 6 EC: 2.5.1.28; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM LYCOPERSICUM; SOURCE 3 ORGANISM_COMMON: TOMATO; SOURCE 4 ORGANISM_TAXID: 4081; SOURCE 5 GENE: CPT1, NDPS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CIS-PRENYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.IMAIZUMI,H.MATSUURA,T.YANAI,K.TAKESHITA,S.MISAWA,H.YAMAGUCHI, AUTHOR 2 N.SAKAI,Y.MIYAGI-INOUE,M.SUENAGA-HIROMORI,K.KATAOKA,T.NAKAYAMA, AUTHOR 3 M.YAMAMOTO,S.TAKAHASHI,S.YAMASHITA REVDAT 3 24-APR-24 8X36 1 JRNL REVDAT 2 17-APR-24 8X36 1 JRNL REVDAT 1 07-FEB-24 8X36 0 JRNL AUTH R.IMAIZUMI,H.MATSUURA,T.YANAI,K.TAKESHITA,S.MISAWA, JRNL AUTH 2 H.YAMAGUCHI,N.SAKAI,Y.MIYAGI-INOUE,M.SUENAGA-HIROMORI, JRNL AUTH 3 T.WAKI,K.KATAOKA,T.NAKAYAMA,M.YAMAMOTO,S.TAKAHASHI, JRNL AUTH 4 S.YAMASHITA JRNL TITL STRUCTURAL-FUNCTIONAL CORRELATIONS BETWEEN UNIQUE N-TERMINAL JRNL TITL 2 REGION AND C-TERMINAL CONSERVED MOTIF IN SHORT-CHAIN JRNL TITL 3 CIS-PRENYLTRANSFERASE FROM TOMATO. JRNL REF CHEMBIOCHEM V. 25 00796 2024 JRNL REFN ESSN 1439-7633 JRNL PMID 38225831 JRNL DOI 10.1002/CBIC.202300796 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 26057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1304 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2648 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.3914 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.3859 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.352 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8X36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1300042119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26172 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7VPC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DL-MALIC ACID, PEG3350, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 48.76000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.34000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 48.76000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.34000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 543 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 42 REMARK 465 THR A 43 REMARK 465 MET A 44 REMARK 465 SER A 45 REMARK 465 ALA A 46 REMARK 465 ARG A 47 REMARK 465 GLY A 48 REMARK 465 LEU A 49 REMARK 465 ASN A 50 REMARK 465 LYS A 51 REMARK 465 ILE A 52 REMARK 465 LEU A 58 REMARK 465 GLN A 59 REMARK 465 THR A 60 REMARK 465 GLU A 61 REMARK 465 GLU A 66 REMARK 465 ASP A 67 REMARK 465 ASN A 68 REMARK 465 ASP A 69 REMARK 465 ASN A 70 REMARK 465 ASP A 71 REMARK 465 LEU A 72 REMARK 465 ASP A 73 REMARK 465 GLU A 74 REMARK 465 GLU A 75 REMARK 465 GLY A 300 REMARK 465 HIS A 301 REMARK 465 THR A 302 REMARK 465 TYR A 303 REMARK 465 GLY B 42 REMARK 465 THR B 43 REMARK 465 MET B 44 REMARK 465 SER B 45 REMARK 465 ALA B 46 REMARK 465 ARG B 47 REMARK 465 GLY B 48 REMARK 465 LEU B 49 REMARK 465 ASN B 50 REMARK 465 LYS B 51 REMARK 465 ILE B 52 REMARK 465 ASP B 67 REMARK 465 ASN B 68 REMARK 465 ASP B 69 REMARK 465 ASN B 70 REMARK 465 ASP B 71 REMARK 465 LEU B 72 REMARK 465 ASP B 73 REMARK 465 GLU B 74 REMARK 465 GLU B 75 REMARK 465 THR B 302 REMARK 465 TYR B 303 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 58 CG CD1 CD2 REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 TYR B 100 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 138 OG REMARK 470 GLU B 141 CG CD OE1 OE2 REMARK 470 PHE B 144 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 145 CG CD1 CD2 REMARK 470 PHE B 149 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 56 -71.73 -111.14 REMARK 500 LEU A 63 34.37 -80.65 REMARK 500 PHE A 259 -134.00 -81.13 REMARK 500 PHE A 298 71.91 -118.75 REMARK 500 LYS B 62 55.09 -148.48 REMARK 500 CYS B 64 66.51 -100.84 REMARK 500 GLU B 151 2.95 -68.37 REMARK 500 GLN B 254 71.58 -117.49 REMARK 500 PHE B 259 -114.56 -84.47 REMARK 500 LEU B 261 -63.91 -133.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 86 OD1 REMARK 620 2 DST A 401 O5 85.5 REMARK 620 3 DST A 401 O8 100.7 76.8 REMARK 620 4 IPE A 402 O1A 118.3 155.5 92.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 86 OD1 REMARK 620 2 IPE B 401 O2A 86.3 REMARK 620 3 DST B 403 O6 79.8 164.8 REMARK 620 4 DST B 403 O8 103.3 107.4 82.0 REMARK 620 N 1 2 3 DBREF 8X36 A 45 303 UNP C1K5M2 CPT1_SOLLC 45 303 DBREF 8X36 B 45 303 UNP C1K5M2 CPT1_SOLLC 45 303 SEQADV 8X36 GLY A 42 UNP C1K5M2 EXPRESSION TAG SEQADV 8X36 THR A 43 UNP C1K5M2 EXPRESSION TAG SEQADV 8X36 MET A 44 UNP C1K5M2 EXPRESSION TAG SEQADV 8X36 GLY B 42 UNP C1K5M2 EXPRESSION TAG SEQADV 8X36 THR B 43 UNP C1K5M2 EXPRESSION TAG SEQADV 8X36 MET B 44 UNP C1K5M2 EXPRESSION TAG SEQRES 1 A 262 GLY THR MET SER ALA ARG GLY LEU ASN LYS ILE SER CYS SEQRES 2 A 262 SER LEU ASN LEU GLN THR GLU LYS LEU CYS TYR GLU ASP SEQRES 3 A 262 ASN ASP ASN ASP LEU ASP GLU GLU LEU MET PRO LYS HIS SEQRES 4 A 262 ILE ALA LEU ILE MET ASP GLY ASN ARG ARG TRP ALA LYS SEQRES 5 A 262 ASP LYS GLY LEU GLU VAL TYR GLU GLY HIS LYS HIS ILE SEQRES 6 A 262 ILE PRO LYS LEU LYS GLU ILE CYS ASP ILE SER SER LYS SEQRES 7 A 262 LEU GLY ILE GLN ILE ILE THR ALA PHE ALA PHE SER THR SEQRES 8 A 262 GLU ASN TRP LYS ARG SER LYS GLU GLU VAL ASP PHE LEU SEQRES 9 A 262 LEU GLN MET PHE GLU GLU ILE TYR ASP GLU PHE SER ARG SEQRES 10 A 262 SER GLY VAL ARG VAL SER ILE ILE GLY CYS LYS SER ASP SEQRES 11 A 262 LEU PRO MET THR LEU GLN LYS CYS ILE ALA LEU THR GLU SEQRES 12 A 262 GLU THR THR LYS GLY ASN LYS GLY LEU HIS LEU VAL ILE SEQRES 13 A 262 ALA LEU ASN TYR GLY GLY TYR TYR ASP ILE LEU GLN ALA SEQRES 14 A 262 THR LYS SER ILE VAL ASN LYS ALA MET ASN GLY LEU LEU SEQRES 15 A 262 ASP VAL GLU ASP ILE ASN LYS ASN LEU PHE ASP GLN GLU SEQRES 16 A 262 LEU GLU SER LYS CYS PRO ASN PRO ASP LEU LEU ILE ARG SEQRES 17 A 262 THR GLY GLY GLU GLN ARG VAL SER ASN PHE LEU LEU TRP SEQRES 18 A 262 GLN LEU ALA TYR THR GLU PHE TYR PHE THR ASN THR LEU SEQRES 19 A 262 PHE PRO ASP PHE GLY GLU GLU ASP LEU LYS GLU ALA ILE SEQRES 20 A 262 MET ASN PHE GLN GLN ARG HIS ARG ARG PHE GLY GLY HIS SEQRES 21 A 262 THR TYR SEQRES 1 B 262 GLY THR MET SER ALA ARG GLY LEU ASN LYS ILE SER CYS SEQRES 2 B 262 SER LEU ASN LEU GLN THR GLU LYS LEU CYS TYR GLU ASP SEQRES 3 B 262 ASN ASP ASN ASP LEU ASP GLU GLU LEU MET PRO LYS HIS SEQRES 4 B 262 ILE ALA LEU ILE MET ASP GLY ASN ARG ARG TRP ALA LYS SEQRES 5 B 262 ASP LYS GLY LEU GLU VAL TYR GLU GLY HIS LYS HIS ILE SEQRES 6 B 262 ILE PRO LYS LEU LYS GLU ILE CYS ASP ILE SER SER LYS SEQRES 7 B 262 LEU GLY ILE GLN ILE ILE THR ALA PHE ALA PHE SER THR SEQRES 8 B 262 GLU ASN TRP LYS ARG SER LYS GLU GLU VAL ASP PHE LEU SEQRES 9 B 262 LEU GLN MET PHE GLU GLU ILE TYR ASP GLU PHE SER ARG SEQRES 10 B 262 SER GLY VAL ARG VAL SER ILE ILE GLY CYS LYS SER ASP SEQRES 11 B 262 LEU PRO MET THR LEU GLN LYS CYS ILE ALA LEU THR GLU SEQRES 12 B 262 GLU THR THR LYS GLY ASN LYS GLY LEU HIS LEU VAL ILE SEQRES 13 B 262 ALA LEU ASN TYR GLY GLY TYR TYR ASP ILE LEU GLN ALA SEQRES 14 B 262 THR LYS SER ILE VAL ASN LYS ALA MET ASN GLY LEU LEU SEQRES 15 B 262 ASP VAL GLU ASP ILE ASN LYS ASN LEU PHE ASP GLN GLU SEQRES 16 B 262 LEU GLU SER LYS CYS PRO ASN PRO ASP LEU LEU ILE ARG SEQRES 17 B 262 THR GLY GLY GLU GLN ARG VAL SER ASN PHE LEU LEU TRP SEQRES 18 B 262 GLN LEU ALA TYR THR GLU PHE TYR PHE THR ASN THR LEU SEQRES 19 B 262 PHE PRO ASP PHE GLY GLU GLU ASP LEU LYS GLU ALA ILE SEQRES 20 B 262 MET ASN PHE GLN GLN ARG HIS ARG ARG PHE GLY GLY HIS SEQRES 21 B 262 THR TYR HET DST A 401 14 HET IPE A 402 14 HET MG A 403 1 HET IPE B 401 14 HET MG B 402 1 HET DST B 403 14 HETNAM DST DIMETHYLALLYL S-THIOLODIPHOSPHATE HETNAM IPE 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN DST DMASPP; DMAPP; DMADP; DIMETHYLALLYL PYROPHOSPHATE; HETSYN 2 DST DIMETHYLALLYL DIPHOSPHATE; ISOPRENYL PYROPHOSPHATE HETSYN IPE ISOPENTENYL PYROPHOSPHATE FORMUL 3 DST 2(C5 H12 O6 P2 S) FORMUL 4 IPE 2(C5 H12 O7 P2) FORMUL 5 MG 2(MG 2+) FORMUL 9 HOH *84(H2 O) HELIX 1 AA1 GLY A 87 LYS A 95 1 9 HELIX 2 AA2 GLU A 98 LYS A 104 1 7 HELIX 3 AA3 HIS A 105 GLY A 121 1 17 HELIX 4 AA4 GLU A 133 ARG A 137 5 5 HELIX 5 AA5 SER A 138 PHE A 149 1 12 HELIX 6 AA6 GLU A 150 SER A 157 1 8 HELIX 7 AA7 CYS A 168 LEU A 172 5 5 HELIX 8 AA8 PRO A 173 LYS A 188 1 16 HELIX 9 AA9 GLY A 202 ASN A 220 1 19 HELIX 10 AB1 ASP A 224 ILE A 228 5 5 HELIX 11 AB2 ASN A 229 GLN A 235 1 7 HELIX 12 AB3 LEU A 261 ALA A 265 5 5 HELIX 13 AB4 LEU A 275 PHE A 279 5 5 HELIX 14 AB5 GLY A 280 PHE A 298 1 19 HELIX 15 AB6 GLY B 87 GLY B 96 1 10 HELIX 16 AB7 GLY B 102 LYS B 104 5 3 HELIX 17 AB8 HIS B 105 GLY B 121 1 17 HELIX 18 AB9 GLU B 133 ARG B 137 5 5 HELIX 19 AC1 SER B 138 PHE B 149 1 12 HELIX 20 AC2 GLU B 151 SER B 157 1 7 HELIX 21 AC3 CYS B 168 LEU B 172 5 5 HELIX 22 AC4 PRO B 173 LYS B 188 1 16 HELIX 23 AC5 GLY B 202 ASN B 220 1 19 HELIX 24 AC6 ASP B 224 ILE B 228 5 5 HELIX 25 AC7 ASN B 229 LEU B 237 1 9 HELIX 26 AC8 LEU B 261 ALA B 265 5 5 HELIX 27 AC9 LEU B 275 PHE B 279 5 5 HELIX 28 AD1 GLY B 280 GLN B 293 1 14 SHEET 1 AA1 6 ARG A 162 ILE A 166 0 SHEET 2 AA1 6 HIS A 194 TYR A 201 1 O LEU A 195 N ARG A 162 SHEET 3 AA1 6 ILE A 124 SER A 131 1 N ILE A 125 O VAL A 196 SHEET 4 AA1 6 HIS A 80 ILE A 84 1 N LEU A 83 O THR A 126 SHEET 5 AA1 6 LEU A 246 ARG A 249 1 O LEU A 246 N ALA A 82 SHEET 6 AA1 6 GLU A 268 PHE A 271 1 O GLU A 268 N LEU A 247 SHEET 1 AA2 6 ARG B 162 ILE B 166 0 SHEET 2 AA2 6 HIS B 194 TYR B 201 1 O LEU B 195 N ARG B 162 SHEET 3 AA2 6 ILE B 124 SER B 131 1 N ILE B 125 O VAL B 196 SHEET 4 AA2 6 HIS B 80 ILE B 84 1 N LEU B 83 O PHE B 128 SHEET 5 AA2 6 LEU B 246 ARG B 249 1 O LEU B 246 N ALA B 82 SHEET 6 AA2 6 GLU B 268 PHE B 271 1 O GLU B 268 N LEU B 247 SSBOND 1 CYS A 54 CYS B 168 1555 1555 2.04 SSBOND 2 CYS A 64 CYS A 241 1555 1555 2.04 SSBOND 3 CYS A 168 CYS B 54 1555 1555 2.04 SSBOND 4 CYS B 64 CYS B 241 1555 1555 2.04 LINK OD1 ASP A 86 MG MG A 403 1555 1555 1.92 LINK O5 DST A 401 MG MG A 403 1555 1555 2.24 LINK O8 DST A 401 MG MG A 403 1555 1555 2.28 LINK O1A IPE A 402 MG MG A 403 1555 1555 1.98 LINK OD1 ASP B 86 MG MG B 402 1555 1555 2.06 LINK O2A IPE B 401 MG MG B 402 1555 1555 2.15 LINK MG MG B 402 O6 DST B 403 1555 1555 2.35 LINK MG MG B 402 O8 DST B 403 1555 1555 2.58 CISPEP 1 CYS A 241 PRO A 242 0 -1.69 CISPEP 2 CYS B 241 PRO B 242 0 -1.81 CRYST1 97.520 48.680 121.130 90.00 90.69 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010254 0.000000 0.000123 0.00000 SCALE2 0.000000 0.020542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008256 0.00000