HEADER TRANSFERASE 23-DEC-23 8XKD TITLE BETA-1,4-GALACOSYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYLTRANSFERASE FAMILY 25 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: AUTHORS STATE THAT THE NCBI ACCESSION NUMBER IS COMPND 6 BAS48030 FOR THE PROTEIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGGREGATIBACTER ACTINOMYCETEMCOMITANS NUM4039; SOURCE 3 ORGANISM_TAXID: 1407647; SOURCE 4 GENE: FXB68_02155; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.LUO,Z.HUANG,J.CHEN,X.HOU,Y.ZHU,D.NI,W.XU,W.ZHANG,Y.RAO,W.MU REVDAT 1 11-DEC-24 8XKD 0 JRNL AUTH G.LUO,Z.HUANG,Y.ZHU,J.CHEN,X.HOU,D.NI,W.XU,W.ZHANG,Y.RAO, JRNL AUTH 2 W.MU JRNL TITL CRYSTAL STRUCTURE AND STRUCTURE-GUIDED TUNNEL ENGINEERING IN JRNL TITL 2 A BACTERIAL BETA-1,4-GALACTOSYLTRANSFERASE. JRNL REF INT.J.BIOL.MACROMOL. V. 279 35374 2024 JRNL REFN ISSN 0141-8130 JRNL PMID 39265897 JRNL DOI 10.1016/J.IJBIOMAC.2024.135374 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 54915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2986 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3987 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 228 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3464 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.04000 REMARK 3 B22 (A**2) : -0.71000 REMARK 3 B33 (A**2) : -0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.343 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3642 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3421 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4937 ; 1.446 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7877 ; 0.785 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 428 ; 5.969 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 195 ;36.068 ;25.436 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 640 ;13.257 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.837 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 544 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4096 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 855 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1691 ; 2.473 ; 3.190 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1690 ; 2.468 ; 3.188 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2111 ; 3.844 ; 4.765 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2112 ; 3.844 ; 4.768 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1951 ; 3.083 ; 3.618 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1951 ; 3.083 ; 3.618 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2822 ; 4.990 ; 5.296 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4182 ; 7.146 ;38.734 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4121 ; 7.099 ;38.411 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 6661 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8XKD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1300043706. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97851 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 46.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.26M SODIUM PHOSPHATE MONOBASIC REMARK 280 MONOHYDRATE, 0.14M POTASSIUM PHOSPHATE DIBASIC, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.30000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.40500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.30000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.40500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 455 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 LEU A 217 REMARK 465 ASN A 218 REMARK 465 GLN A 219 REMARK 465 GLU A 220 REMARK 465 ALA A 221 REMARK 465 SER A 222 REMARK 465 LEU A 223 REMARK 465 LEU A 224 REMARK 465 VAL A 225 REMARK 465 SER A 226 REMARK 465 ASN A 227 REMARK 465 LEU A 228 REMARK 465 GLU A 229 REMARK 465 GLN A 230 REMARK 465 GLU A 231 REMARK 465 ARG A 232 REMARK 465 LYS A 233 REMARK 465 ILE A 234 REMARK 465 ASN A 235 REMARK 465 LEU A 236 REMARK 465 LYS A 237 REMARK 465 TYR A 238 REMARK 465 GLU A 239 REMARK 465 LYS A 240 REMARK 465 ARG A 241 REMARK 465 LYS A 242 REMARK 465 HIS A 243 REMARK 465 LEU A 244 REMARK 465 GLU A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 LYS B 155 REMARK 465 HIS B 156 REMARK 465 GLN B 216 REMARK 465 LEU B 217 REMARK 465 ASN B 218 REMARK 465 GLN B 219 REMARK 465 GLU B 220 REMARK 465 ALA B 221 REMARK 465 SER B 222 REMARK 465 LEU B 223 REMARK 465 LEU B 224 REMARK 465 VAL B 225 REMARK 465 SER B 226 REMARK 465 ASN B 227 REMARK 465 LEU B 228 REMARK 465 GLU B 229 REMARK 465 GLN B 230 REMARK 465 GLU B 231 REMARK 465 ARG B 232 REMARK 465 LYS B 233 REMARK 465 ILE B 234 REMARK 465 ASN B 235 REMARK 465 LEU B 236 REMARK 465 LYS B 237 REMARK 465 TYR B 238 REMARK 465 GLU B 239 REMARK 465 LYS B 240 REMARK 465 ARG B 241 REMARK 465 LYS B 242 REMARK 465 HIS B 243 REMARK 465 LEU B 244 REMARK 465 GLU B 245 REMARK 465 HIS B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 HIS B 249 REMARK 465 HIS B 250 REMARK 465 HIS B 251 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 404 O HOH A 484 2.16 REMARK 500 O HOH B 440 O HOH B 489 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 72 CG - SD - CE ANGL. DEV. = -10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 193 -74.25 -128.51 REMARK 500 ASN B 193 -76.42 -128.90 REMARK 500 ASN B 197 15.68 -69.72 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8XKD A 1 233 UNP A0A5D0ENI3_AGGAC DBREF2 8XKD A A0A5D0ENI3 1 233 DBREF1 8XKD B 1 233 UNP A0A5D0ENI3_AGGAC DBREF2 8XKD B A0A5D0ENI3 1 233 SEQADV 8XKD ILE A 234 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD ASN A 235 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LEU A 236 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS A 237 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD TYR A 238 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD GLU A 239 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS A 240 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD ARG A 241 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS A 242 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 243 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LEU A 244 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD GLU A 245 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 246 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 247 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 248 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 249 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 250 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS A 251 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD ILE B 234 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD ASN B 235 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LEU B 236 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS B 237 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD TYR B 238 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD GLU B 239 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS B 240 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD ARG B 241 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LYS B 242 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 243 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD LEU B 244 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD GLU B 245 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 246 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 247 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 248 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 249 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 250 UNP A0A5D0ENI EXPRESSION TAG SEQADV 8XKD HIS B 251 UNP A0A5D0ENI EXPRESSION TAG SEQRES 1 A 251 MET ASN SER THR GLU ASN LYS ASN PHE VAL ILE SER ILE SEQRES 2 A 251 SER THR ALA GLU GLN ARG ARG ASN HIS ILE ILE GLU GLN SEQRES 3 A 251 PHE THR HIS GLN ASN ILE PRO PHE GLU PHE PHE ASP ALA SEQRES 4 A 251 PHE THR PRO SER ASP LYS LEU THR ASP HIS LEU GLN ARG SEQRES 5 A 251 TYR LEU PRO ASN VAL ALA ASN ALA ALA GLN LEU THR MET SEQRES 6 A 251 GLY GLU LYS GLY CYS LEU MET SER HIS PHE MET LEU TRP SEQRES 7 A 251 LYS LYS CYS ILE ASP GLU ASN LEU ASP TYR ILE THR LEU SEQRES 8 A 251 PHE GLU ASP ASP ILE LEU LEU GLY GLU ASN ALA ASN LYS SEQRES 9 A 251 PHE LEU ALA GLU GLY ASP TRP LEU LYS VAL ARG PHE ASN SEQRES 10 A 251 PHE GLN GLU ILE PHE VAL LEU ARG LEU GLU THR PHE LEU SEQRES 11 A 251 MET PRO VAL GLN LEU GLU LYS GLN THR GLN ILE PRO PRO SEQRES 12 A 251 PHE GLN GLN ARG ASP ILE ASP ILE LEU THR SER LYS HIS SEQRES 13 A 251 PHE GLY THR ALA GLY TYR VAL ILE SER GLN GLY ALA ALA SEQRES 14 A 251 LYS TYR LEU ILE ALA LEU PHE GLU LYS LEU THR THR GLU SEQRES 15 A 251 GLU ILE LYS PRO ILE ASP GLU ILE MET PHE ASN GLN GLN SEQRES 16 A 251 ILE ASN ALA THR ASP TYR ARG VAL TYR GLN LEU ASN PRO SEQRES 17 A 251 ALA ILE CYS VAL GLN GLU LEU GLN LEU ASN GLN GLU ALA SEQRES 18 A 251 SER LEU LEU VAL SER ASN LEU GLU GLN GLU ARG LYS ILE SEQRES 19 A 251 ASN LEU LYS TYR GLU LYS ARG LYS HIS LEU GLU HIS HIS SEQRES 20 A 251 HIS HIS HIS HIS SEQRES 1 B 251 MET ASN SER THR GLU ASN LYS ASN PHE VAL ILE SER ILE SEQRES 2 B 251 SER THR ALA GLU GLN ARG ARG ASN HIS ILE ILE GLU GLN SEQRES 3 B 251 PHE THR HIS GLN ASN ILE PRO PHE GLU PHE PHE ASP ALA SEQRES 4 B 251 PHE THR PRO SER ASP LYS LEU THR ASP HIS LEU GLN ARG SEQRES 5 B 251 TYR LEU PRO ASN VAL ALA ASN ALA ALA GLN LEU THR MET SEQRES 6 B 251 GLY GLU LYS GLY CYS LEU MET SER HIS PHE MET LEU TRP SEQRES 7 B 251 LYS LYS CYS ILE ASP GLU ASN LEU ASP TYR ILE THR LEU SEQRES 8 B 251 PHE GLU ASP ASP ILE LEU LEU GLY GLU ASN ALA ASN LYS SEQRES 9 B 251 PHE LEU ALA GLU GLY ASP TRP LEU LYS VAL ARG PHE ASN SEQRES 10 B 251 PHE GLN GLU ILE PHE VAL LEU ARG LEU GLU THR PHE LEU SEQRES 11 B 251 MET PRO VAL GLN LEU GLU LYS GLN THR GLN ILE PRO PRO SEQRES 12 B 251 PHE GLN GLN ARG ASP ILE ASP ILE LEU THR SER LYS HIS SEQRES 13 B 251 PHE GLY THR ALA GLY TYR VAL ILE SER GLN GLY ALA ALA SEQRES 14 B 251 LYS TYR LEU ILE ALA LEU PHE GLU LYS LEU THR THR GLU SEQRES 15 B 251 GLU ILE LYS PRO ILE ASP GLU ILE MET PHE ASN GLN GLN SEQRES 16 B 251 ILE ASN ALA THR ASP TYR ARG VAL TYR GLN LEU ASN PRO SEQRES 17 B 251 ALA ILE CYS VAL GLN GLU LEU GLN LEU ASN GLN GLU ALA SEQRES 18 B 251 SER LEU LEU VAL SER ASN LEU GLU GLN GLU ARG LYS ILE SEQRES 19 B 251 ASN LEU LYS TYR GLU LYS ARG LYS HIS LEU GLU HIS HIS SEQRES 20 B 251 HIS HIS HIS HIS HET UDP A 301 25 HET UDP B 301 25 HET PEG B 302 7 HET PGE B 303 10 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL FORMUL 3 UDP 2(C9 H14 N2 O12 P2) FORMUL 5 PEG C4 H10 O3 FORMUL 6 PGE C6 H14 O4 FORMUL 7 HOH *184(H2 O) HELIX 1 AA1 ALA A 16 GLN A 30 1 15 HELIX 2 AA2 SER A 43 LEU A 54 1 12 HELIX 3 AA3 LEU A 54 ASN A 59 1 6 HELIX 4 AA4 THR A 64 GLU A 84 1 21 HELIX 5 AA5 ASN A 101 ALA A 107 1 7 HELIX 6 AA6 GLY A 109 PHE A 116 1 8 HELIX 7 AA7 GLN A 166 LEU A 179 1 14 HELIX 8 AA8 THR A 180 ILE A 184 5 5 HELIX 9 AA9 PRO A 186 ASN A 193 1 8 HELIX 10 AB1 GLN A 194 ASN A 197 5 4 HELIX 11 AB2 ALA B 16 GLN B 30 1 15 HELIX 12 AB3 SER B 43 LEU B 54 1 12 HELIX 13 AB4 LEU B 54 ASN B 59 1 6 HELIX 14 AB5 THR B 64 GLU B 84 1 21 HELIX 15 AB6 ALA B 102 ALA B 107 1 6 HELIX 16 AB7 GLY B 109 VAL B 114 1 6 HELIX 17 AB8 GLN B 166 LEU B 179 1 14 HELIX 18 AB9 THR B 180 ILE B 184 5 5 HELIX 19 AC1 PRO B 186 ASN B 193 1 8 HELIX 20 AC2 GLN B 194 ALA B 198 5 5 SHEET 1 AA1 8 GLU A 35 ASP A 38 0 SHEET 2 AA1 8 ASN A 8 SER A 12 1 N VAL A 10 O PHE A 37 SHEET 3 AA1 8 TYR A 88 GLU A 93 1 O PHE A 92 N ILE A 11 SHEET 4 AA1 8 GLY A 161 SER A 165 -1 O ILE A 164 N ILE A 89 SHEET 5 AA1 8 PHE A 122 ARG A 125 -1 N LEU A 124 O VAL A 163 SHEET 6 AA1 8 ARG A 202 ASN A 207 1 O TYR A 204 N VAL A 123 SHEET 7 AA1 8 ASP B 148 THR B 153 -1 O ASP B 150 N GLN A 205 SHEET 8 AA1 8 GLN B 134 GLU B 136 -1 N GLU B 136 O ILE B 151 SHEET 1 AA2 2 ILE A 96 LEU A 98 0 SHEET 2 AA2 2 CYS A 211 GLN A 213 -1 O VAL A 212 N LEU A 97 SHEET 1 AA3 8 VAL A 133 GLU A 136 0 SHEET 2 AA3 8 ASP A 148 SER A 154 -1 O ILE A 151 N GLU A 136 SHEET 3 AA3 8 ARG B 202 ASN B 207 -1 O GLN B 205 N ASP A 150 SHEET 4 AA3 8 PHE B 122 ARG B 125 1 N ARG B 125 O TYR B 204 SHEET 5 AA3 8 GLY B 161 SER B 165 -1 O VAL B 163 N LEU B 124 SHEET 6 AA3 8 TYR B 88 GLU B 93 -1 N LEU B 91 O TYR B 162 SHEET 7 AA3 8 ASN B 8 SER B 12 1 N ILE B 11 O PHE B 92 SHEET 8 AA3 8 GLU B 35 ASP B 38 1 O PHE B 37 N VAL B 10 SHEET 1 AA4 2 ILE B 96 LEU B 98 0 SHEET 2 AA4 2 CYS B 211 GLN B 213 -1 O VAL B 212 N LEU B 97 CISPEP 1 ASN A 207 PRO A 208 0 2.43 CISPEP 2 ASN B 207 PRO B 208 0 3.18 CRYST1 82.600 92.810 71.320 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012107 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014021 0.00000 CONECT 3497 3498 3502 3505 CONECT 3498 3497 3499 3503 CONECT 3499 3498 3500 CONECT 3500 3499 3501 3504 CONECT 3501 3500 3502 CONECT 3502 3497 3501 CONECT 3503 3498 CONECT 3504 3500 CONECT 3505 3497 3506 3510 CONECT 3506 3505 3507 3508 CONECT 3507 3506 CONECT 3508 3506 3509 3511 CONECT 3509 3508 3510 3512 CONECT 3510 3505 3509 CONECT 3511 3508 CONECT 3512 3509 3513 CONECT 3513 3512 3514 CONECT 3514 3513 3515 3516 3517 CONECT 3515 3514 CONECT 3516 3514 CONECT 3517 3514 3518 CONECT 3518 3517 3519 3520 3521 CONECT 3519 3518 CONECT 3520 3518 CONECT 3521 3518 CONECT 3522 3523 3527 3530 CONECT 3523 3522 3524 3528 CONECT 3524 3523 3525 CONECT 3525 3524 3526 3529 CONECT 3526 3525 3527 CONECT 3527 3522 3526 CONECT 3528 3523 CONECT 3529 3525 CONECT 3530 3522 3531 3535 CONECT 3531 3530 3532 3533 CONECT 3532 3531 CONECT 3533 3531 3534 3536 CONECT 3534 3533 3535 3537 CONECT 3535 3530 3534 CONECT 3536 3533 CONECT 3537 3534 3538 CONECT 3538 3537 3539 CONECT 3539 3538 3540 3541 3542 CONECT 3540 3539 CONECT 3541 3539 CONECT 3542 3539 3543 CONECT 3543 3542 3544 3545 3546 CONECT 3544 3543 CONECT 3545 3543 CONECT 3546 3543 CONECT 3547 3548 3549 CONECT 3548 3547 CONECT 3549 3547 3550 CONECT 3550 3549 3551 CONECT 3551 3550 3552 CONECT 3552 3551 3553 CONECT 3553 3552 CONECT 3554 3555 3556 CONECT 3555 3554 CONECT 3556 3554 3557 CONECT 3557 3556 3558 CONECT 3558 3557 3559 CONECT 3559 3558 3563 CONECT 3560 3561 CONECT 3561 3560 3562 CONECT 3562 3561 3563 CONECT 3563 3559 3562 MASTER 389 0 4 20 20 0 0 6 3715 2 67 40 END