data_8XNE # _entry.id 8XNE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8XNE pdb_00008xne 10.2210/pdb8xne/pdb WWPDB D_1300043859 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-01-01 ? 2 'Structure model' 1 1 2025-03-05 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8XNE _pdbx_database_status.recvd_initial_deposition_date 2023-12-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email soishi@mb.kyoto-phu.ac.jp _pdbx_contact_author.name_first Shinya _pdbx_contact_author.name_last Oishi _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2833-2539 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Oishi, S.' 1 0000-0002-2833-2539 'Takahara, A.' 2 0000-0002-4658-0181 'Nakatsu, T.' 3 0000-0002-9582-4023 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 68 _citation.language ? _citation.page_first 3123 _citation.page_last 3133 _citation.title 'Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.4c02337 _citation.pdbx_database_id_PubMed 39887040 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Takahara, A.' 1 ? primary 'Nakatsu, T.' 2 ? primary 'Hirata, K.' 3 ? primary 'Hayashi, H.' 4 ? primary 'Kawaji, K.' 5 ? primary 'Aoki, K.' 6 ? primary 'Inuki, S.' 7 0000-0002-7525-1280 primary 'Ohno, H.' 8 0000-0002-3246-4809 primary 'Kato, H.' 9 ? primary 'Kodama, E.' 10 ? primary 'Oishi, S.' 11 0000-0002-2833-2539 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Fusion glycoprotein F1' 4628.080 1 ? ? ? ? 2 polymer syn 'Fusion glycoprotein F1' 3840.322 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 118 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(ACE)NSQAIDNLRASLETTNQAIEAIRQAGQEMILAVQGVQDYINN(NH2)' XNSQAIDNLRASLETTNQAIEAIRQAGQEMILAVQGVQDYINNX A ? 2 'polypeptide(L)' no yes '(ACE)ISLERLDVGTNLGNAIAKLEDAKELLESSDQILRS(NH2)' XISLERLDVGTNLGNAIAKLEDAKELLESSDQILRSX B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ASN n 1 3 SER n 1 4 GLN n 1 5 ALA n 1 6 ILE n 1 7 ASP n 1 8 ASN n 1 9 LEU n 1 10 ARG n 1 11 ALA n 1 12 SER n 1 13 LEU n 1 14 GLU n 1 15 THR n 1 16 THR n 1 17 ASN n 1 18 GLN n 1 19 ALA n 1 20 ILE n 1 21 GLU n 1 22 ALA n 1 23 ILE n 1 24 ARG n 1 25 GLN n 1 26 ALA n 1 27 GLY n 1 28 GLN n 1 29 GLU n 1 30 MET n 1 31 ILE n 1 32 LEU n 1 33 ALA n 1 34 VAL n 1 35 GLN n 1 36 GLY n 1 37 VAL n 1 38 GLN n 1 39 ASP n 1 40 TYR n 1 41 ILE n 1 42 ASN n 1 43 ASN n 1 44 NH2 n 2 1 ACE n 2 2 ILE n 2 3 SER n 2 4 LEU n 2 5 GLU n 2 6 ARG n 2 7 LEU n 2 8 ASP n 2 9 VAL n 2 10 GLY n 2 11 THR n 2 12 ASN n 2 13 LEU n 2 14 GLY n 2 15 ASN n 2 16 ALA n 2 17 ILE n 2 18 ALA n 2 19 LYS n 2 20 LEU n 2 21 GLU n 2 22 ASP n 2 23 ALA n 2 24 LYS n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 GLU n 2 29 SER n 2 30 SER n 2 31 ASP n 2 32 GLN n 2 33 ILE n 2 34 LEU n 2 35 ARG n 2 36 SER n 2 37 NH2 n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 44 'Measles virus strain Edmonston' ? 11235 ? 2 1 sample 1 37 'Measles virus strain Edmonston' ? 11235 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 142 142 ACE ACE A . n A 1 2 ASN 2 143 143 ASN ASN A . n A 1 3 SER 3 144 144 SER SER A . n A 1 4 GLN 4 145 145 GLN GLN A . n A 1 5 ALA 5 146 146 ALA ALA A . n A 1 6 ILE 6 147 147 ILE ILE A . n A 1 7 ASP 7 148 148 ASP ASP A . n A 1 8 ASN 8 149 149 ASN ASN A . n A 1 9 LEU 9 150 150 LEU LEU A . n A 1 10 ARG 10 151 151 ARG ARG A . n A 1 11 ALA 11 152 152 ALA ALA A . n A 1 12 SER 12 153 153 SER SER A . n A 1 13 LEU 13 154 154 LEU LEU A . n A 1 14 GLU 14 155 155 GLU GLU A . n A 1 15 THR 15 156 156 THR THR A . n A 1 16 THR 16 157 157 THR THR A . n A 1 17 ASN 17 158 158 ASN ASN A . n A 1 18 GLN 18 159 159 GLN GLN A . n A 1 19 ALA 19 160 160 ALA ALA A . n A 1 20 ILE 20 161 161 ILE ILE A . n A 1 21 GLU 21 162 162 GLU GLU A . n A 1 22 ALA 22 163 163 ALA ALA A . n A 1 23 ILE 23 164 164 ILE ILE A . n A 1 24 ARG 24 165 165 ARG ARG A . n A 1 25 GLN 25 166 166 GLN GLN A . n A 1 26 ALA 26 167 167 ALA ALA A . n A 1 27 GLY 27 168 168 GLY GLY A . n A 1 28 GLN 28 169 169 GLN GLN A . n A 1 29 GLU 29 170 170 GLU GLU A . n A 1 30 MET 30 171 171 MET MET A . n A 1 31 ILE 31 172 172 ILE ILE A . n A 1 32 LEU 32 173 173 LEU LEU A . n A 1 33 ALA 33 174 174 ALA ALA A . n A 1 34 VAL 34 175 175 VAL VAL A . n A 1 35 GLN 35 176 176 GLN GLN A . n A 1 36 GLY 36 177 177 GLY GLY A . n A 1 37 VAL 37 178 178 VAL VAL A . n A 1 38 GLN 38 179 179 GLN GLN A . n A 1 39 ASP 39 180 180 ASP ASP A . n A 1 40 TYR 40 181 181 TYR TYR A . n A 1 41 ILE 41 182 182 ILE ILE A . n A 1 42 ASN 42 183 183 ASN ASN A . n A 1 43 ASN 43 184 184 ASN ASN A . n A 1 44 NH2 44 185 185 NH2 NH2 A . n B 2 1 ACE 1 451 451 ACE ACE B . n B 2 2 ILE 2 452 452 ILE ILE B . n B 2 3 SER 3 453 453 SER SER B . n B 2 4 LEU 4 454 454 LEU LEU B . n B 2 5 GLU 5 455 455 GLU GLU B . n B 2 6 ARG 6 456 456 ARG ARG B . n B 2 7 LEU 7 457 457 LEU LEU B . n B 2 8 ASP 8 458 458 ASP ASP B . n B 2 9 VAL 9 459 459 VAL VAL B . n B 2 10 GLY 10 460 460 GLY GLY B . n B 2 11 THR 11 461 461 THR THR B . n B 2 12 ASN 12 462 462 ASN ASN B . n B 2 13 LEU 13 463 463 LEU LEU B . n B 2 14 GLY 14 464 464 GLY GLY B . n B 2 15 ASN 15 465 465 ASN ASN B . n B 2 16 ALA 16 466 466 ALA ALA B . n B 2 17 ILE 17 467 467 ILE ILE B . n B 2 18 ALA 18 468 468 ALA ALA B . n B 2 19 LYS 19 469 469 LYS LYS B . n B 2 20 LEU 20 470 470 LEU LEU B . n B 2 21 GLU 21 471 471 GLU GLU B . n B 2 22 ASP 22 472 472 ASP ASP B . n B 2 23 ALA 23 473 473 ALA ALA B . n B 2 24 LYS 24 474 474 LYS LYS B . n B 2 25 GLU 25 475 475 GLU GLU B . n B 2 26 LEU 26 476 476 LEU LEU B . n B 2 27 LEU 27 477 477 LEU LEU B . n B 2 28 GLU 28 478 478 GLU GLU B . n B 2 29 SER 29 479 479 SER SER B . n B 2 30 SER 30 480 480 SER SER B . n B 2 31 ASP 31 481 481 ASP ASP B . n B 2 32 GLN 32 482 482 GLN GLN B . n B 2 33 ILE 33 483 483 ILE ILE B . n B 2 34 LEU 34 484 484 LEU LEU B . n B 2 35 ARG 35 485 485 ARG ARG B . n B 2 36 SER 36 486 486 SER SER B . n B 2 37 NH2 37 487 487 NH2 NH2 B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 501 1 MG MG B . D 3 MG 1 502 2 MG MG B . E 4 HOH 1 201 87 HOH HOH A . E 4 HOH 2 202 36 HOH HOH A . E 4 HOH 3 203 38 HOH HOH A . E 4 HOH 4 204 51 HOH HOH A . E 4 HOH 5 205 7 HOH HOH A . E 4 HOH 6 206 77 HOH HOH A . E 4 HOH 7 207 28 HOH HOH A . E 4 HOH 8 208 45 HOH HOH A . E 4 HOH 9 209 68 HOH HOH A . E 4 HOH 10 210 37 HOH HOH A . E 4 HOH 11 211 3 HOH HOH A . E 4 HOH 12 212 116 HOH HOH A . E 4 HOH 13 213 53 HOH HOH A . E 4 HOH 14 214 13 HOH HOH A . E 4 HOH 15 215 8 HOH HOH A . E 4 HOH 16 216 72 HOH HOH A . E 4 HOH 17 217 10 HOH HOH A . E 4 HOH 18 218 21 HOH HOH A . E 4 HOH 19 219 9 HOH HOH A . E 4 HOH 20 220 43 HOH HOH A . E 4 HOH 21 221 65 HOH HOH A . E 4 HOH 22 222 5 HOH HOH A . E 4 HOH 23 223 44 HOH HOH A . E 4 HOH 24 224 93 HOH HOH A . E 4 HOH 25 225 19 HOH HOH A . E 4 HOH 26 226 57 HOH HOH A . E 4 HOH 27 227 25 HOH HOH A . E 4 HOH 28 228 17 HOH HOH A . E 4 HOH 29 229 73 HOH HOH A . E 4 HOH 30 230 50 HOH HOH A . E 4 HOH 31 231 42 HOH HOH A . E 4 HOH 32 232 105 HOH HOH A . E 4 HOH 33 233 14 HOH HOH A . E 4 HOH 34 234 16 HOH HOH A . E 4 HOH 35 235 111 HOH HOH A . E 4 HOH 36 236 89 HOH HOH A . E 4 HOH 37 237 52 HOH HOH A . E 4 HOH 38 238 107 HOH HOH A . E 4 HOH 39 239 60 HOH HOH A . E 4 HOH 40 240 76 HOH HOH A . E 4 HOH 41 241 74 HOH HOH A . E 4 HOH 42 242 69 HOH HOH A . E 4 HOH 43 243 54 HOH HOH A . E 4 HOH 44 244 29 HOH HOH A . E 4 HOH 45 245 90 HOH HOH A . E 4 HOH 46 246 56 HOH HOH A . E 4 HOH 47 247 88 HOH HOH A . E 4 HOH 48 248 91 HOH HOH A . E 4 HOH 49 249 55 HOH HOH A . F 4 HOH 1 601 118 HOH HOH B . F 4 HOH 2 602 104 HOH HOH B . F 4 HOH 3 603 66 HOH HOH B . F 4 HOH 4 604 114 HOH HOH B . F 4 HOH 5 605 119 HOH HOH B . F 4 HOH 6 606 81 HOH HOH B . F 4 HOH 7 607 35 HOH HOH B . F 4 HOH 8 608 61 HOH HOH B . F 4 HOH 9 609 1 HOH HOH B . F 4 HOH 10 610 18 HOH HOH B . F 4 HOH 11 611 84 HOH HOH B . F 4 HOH 12 612 11 HOH HOH B . F 4 HOH 13 613 96 HOH HOH B . F 4 HOH 14 614 99 HOH HOH B . F 4 HOH 15 615 100 HOH HOH B . F 4 HOH 16 616 40 HOH HOH B . F 4 HOH 17 617 103 HOH HOH B . F 4 HOH 18 618 94 HOH HOH B . F 4 HOH 19 619 63 HOH HOH B . F 4 HOH 20 620 27 HOH HOH B . F 4 HOH 21 621 109 HOH HOH B . F 4 HOH 22 622 2 HOH HOH B . F 4 HOH 23 623 22 HOH HOH B . F 4 HOH 24 624 110 HOH HOH B . F 4 HOH 25 625 47 HOH HOH B . F 4 HOH 26 626 70 HOH HOH B . F 4 HOH 27 627 32 HOH HOH B . F 4 HOH 28 628 83 HOH HOH B . F 4 HOH 29 629 30 HOH HOH B . F 4 HOH 30 630 97 HOH HOH B . F 4 HOH 31 631 62 HOH HOH B . F 4 HOH 32 632 67 HOH HOH B . F 4 HOH 33 633 85 HOH HOH B . F 4 HOH 34 634 117 HOH HOH B . F 4 HOH 35 635 12 HOH HOH B . F 4 HOH 36 636 6 HOH HOH B . F 4 HOH 37 637 4 HOH HOH B . F 4 HOH 38 638 80 HOH HOH B . F 4 HOH 39 639 20 HOH HOH B . F 4 HOH 40 640 41 HOH HOH B . F 4 HOH 41 641 79 HOH HOH B . F 4 HOH 42 642 102 HOH HOH B . F 4 HOH 43 643 31 HOH HOH B . F 4 HOH 44 644 23 HOH HOH B . F 4 HOH 45 645 46 HOH HOH B . F 4 HOH 46 646 15 HOH HOH B . F 4 HOH 47 647 64 HOH HOH B . F 4 HOH 48 648 39 HOH HOH B . F 4 HOH 49 649 95 HOH HOH B . F 4 HOH 50 650 106 HOH HOH B . F 4 HOH 51 651 24 HOH HOH B . F 4 HOH 52 652 33 HOH HOH B . F 4 HOH 53 653 82 HOH HOH B . F 4 HOH 54 654 113 HOH HOH B . F 4 HOH 55 655 92 HOH HOH B . F 4 HOH 56 656 86 HOH HOH B . F 4 HOH 57 657 48 HOH HOH B . F 4 HOH 58 658 49 HOH HOH B . F 4 HOH 59 659 26 HOH HOH B . F 4 HOH 60 660 101 HOH HOH B . F 4 HOH 61 661 108 HOH HOH B . F 4 HOH 62 662 115 HOH HOH B . F 4 HOH 63 663 75 HOH HOH B . F 4 HOH 64 664 34 HOH HOH B . F 4 HOH 65 665 78 HOH HOH B . F 4 HOH 66 666 71 HOH HOH B . F 4 HOH 67 667 59 HOH HOH B . F 4 HOH 68 668 98 HOH HOH B . F 4 HOH 69 669 58 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8XNE _cell.details ? _cell.formula_units_Z ? _cell.length_a 28.506 _cell.length_a_esd ? _cell.length_b 28.506 _cell.length_b_esd ? _cell.length_c 387.637 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8XNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8XNE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.79 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 31.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '200 mM MgCl2, 30% (w/v) PEG 3350, 100 mM MES (pH 6.5)' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-07-18 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8XNE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.155 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22473 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.72 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.71 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.096 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.155 _reflns_shell.d_res_low 1.22 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.12 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3484 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.94 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.446 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.969 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.3 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 0.119 _refine.aniso_B[1][2] 0.060 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 0.119 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -0.386 _refine.B_iso_max ? _refine.B_iso_mean 11.466 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8XNE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.155 _refine.ls_d_res_low 24.601 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22463 _refine.ls_number_reflns_R_free 1124 _refine.ls_number_reflns_R_work 21339 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.742 _refine.ls_percent_reflns_R_free 5.004 _refine.ls_R_factor_all 0.161 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1871 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1597 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.039 _refine.pdbx_overall_ESU_R_Free 0.042 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.521 _refine.overall_SU_ML 0.025 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 595 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 715 _refine_hist.d_res_high 1.155 _refine_hist.d_res_low 24.601 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.013 668 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 631 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.813 1.631 915 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.684 1.569 1484 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 3.391 5.000 97 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.892 23.953 43 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.412 15.000 134 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 7.462 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 98 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 791 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 120 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.224 0.200 159 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.154 0.200 576 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.174 0.200 336 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 309 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.147 0.200 74 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.251 0.200 24 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.224 0.200 93 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.184 0.200 32 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.117 0.200 1 ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 1.039 0.929 336 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.001 0.920 334 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.414 1.399 423 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.396 1.398 423 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.150 1.218 332 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.150 1.218 332 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.059 1.742 480 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.056 1.745 481 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.694 13.547 825 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 4.247 12.251 787 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.155 1.185 1636 . 80 1520 97.7995 . 0.276 . . 0.276 . . . . . 0.229 . 20 . 0.924 0.927 0.273 'X-RAY DIFFRACTION' 1.185 1.217 1550 . 78 1472 100.0000 . 0.227 . . 0.225 . . . . . 0.186 . 20 . 0.932 0.922 0.279 'X-RAY DIFFRACTION' 1.217 1.253 1544 . 77 1467 100.0000 . 0.176 . . 0.175 . . . . . 0.149 . 20 . 0.955 0.946 0.194 'X-RAY DIFFRACTION' 1.253 1.291 1496 . 75 1419 99.8663 . 0.160 . . 0.158 . . . . . 0.139 . 20 . 0.959 0.953 0.211 'X-RAY DIFFRACTION' 1.291 1.333 1459 . 73 1385 99.9315 . 0.154 . . 0.151 . . . . . 0.134 . 20 . 0.961 0.954 0.209 'X-RAY DIFFRACTION' 1.333 1.380 1400 . 70 1330 100.0000 . 0.153 . . 0.151 . . . . . 0.133 . 20 . 0.967 0.960 0.190 'X-RAY DIFFRACTION' 1.380 1.432 1369 . 68 1301 100.0000 . 0.162 . . 0.161 . . . . . 0.144 . 20 . 0.966 0.963 0.181 'X-RAY DIFFRACTION' 1.432 1.490 1313 . 66 1247 100.0000 . 0.149 . . 0.150 . . . . . 0.140 . 20 . 0.974 0.975 0.144 'X-RAY DIFFRACTION' 1.490 1.556 1257 . 63 1192 99.8409 . 0.157 . . 0.155 . . . . . 0.146 . 20 . 0.969 0.959 0.193 'X-RAY DIFFRACTION' 1.556 1.632 1211 . 60 1151 100.0000 . 0.154 . . 0.151 . . . . . 0.144 . 20 . 0.966 0.951 0.212 'X-RAY DIFFRACTION' 1.632 1.719 1154 . 58 1095 99.9133 . 0.143 . . 0.143 . . . . . 0.139 . 20 . 0.975 0.975 0.145 'X-RAY DIFFRACTION' 1.719 1.823 1114 . 55 1059 100.0000 . 0.154 . . 0.154 . . . . . 0.148 . 20 . 0.972 0.972 0.157 'X-RAY DIFFRACTION' 1.823 1.948 1037 . 52 984 99.9036 . 0.143 . . 0.141 . . . . . 0.144 . 20 . 0.974 0.964 0.180 'X-RAY DIFFRACTION' 1.948 2.103 972 . 49 923 100.0000 . 0.140 . . 0.139 . . . . . 0.146 . 20 . 0.977 0.971 0.166 'X-RAY DIFFRACTION' 2.103 2.302 909 . 45 862 99.7800 . 0.136 . . 0.134 . . . . . 0.147 . 20 . 0.978 0.971 0.173 'X-RAY DIFFRACTION' 2.302 2.571 836 . 42 794 100.0000 . 0.142 . . 0.139 . . . . . 0.164 . 20 . 0.974 0.959 0.204 'X-RAY DIFFRACTION' 2.571 2.964 736 . 37 699 100.0000 . 0.163 . . 0.162 . . . . . 0.189 . 20 . 0.969 0.967 0.182 'X-RAY DIFFRACTION' 2.964 3.617 655 . 32 621 99.6947 . 0.156 . . 0.157 . . . . . 0.188 . 20 . 0.975 0.976 0.136 'X-RAY DIFFRACTION' 3.617 5.060 523 . 26 495 99.6176 . 0.157 . . 0.155 . . . . . 0.196 . 20 . 0.979 0.974 0.201 'X-RAY DIFFRACTION' 5.060 24.601 344 . 18 323 99.1279 . 0.257 . . 0.257 . . . . . 0.355 . 20 . 0.961 0.968 0.253 # _struct.entry_id 8XNE _struct.title 'Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (H32 space group)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8XNE _struct_keywords.text 'Fusion protein, fusion inhibitor, six-helix bundle, ANTIVIRAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP FUS_MEASE P69353 ? 1 NSQAIDNLRASLETTNQAIEAIRQAGQEMILAVQGVQDYINN 0 2 UNP FUS_MEASE P69353 ? 2 ISLERLDVGTNLGNAIAKLEDAKELLESSDQILRS 0 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8XNE A 2 ? 43 ? P69353 143 ? 184 ? 143 184 2 2 8XNE B 2 ? 36 ? P69353 452 ? 486 ? 452 486 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8XNE ACE A 1 ? UNP P69353 ? ? acetylation 142 1 1 8XNE NH2 A 44 ? UNP P69353 ? ? amidation 185 2 2 8XNE ACE B 1 ? UNP P69353 ? ? acetylation 451 3 2 8XNE NH2 B 37 ? UNP P69353 ? ? amidation 487 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13650 ? 1 MORE -122 ? 1 'SSA (A^2)' 11730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 28.5060000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 14.2530000000 -0.8660254038 -0.5000000000 0.0000000000 24.6869201603 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? ASN A 43 ? ASN A 143 ASN A 184 1 ? 42 HELX_P HELX_P2 AA2 VAL B 9 ? SER B 36 ? VAL B 459 SER B 486 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A ASN 2 N ? ? A ACE 142 A ASN 143 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A ASN 43 C ? ? ? 1_555 A NH2 44 N ? ? A ASN 184 A NH2 185 1_555 ? ? ? ? ? ? ? 1.277 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B ILE 2 N ? ? B ACE 451 B ILE 452 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale4 covale both ? B SER 36 C ? ? ? 1_555 B NH2 37 N ? ? B SER 486 B NH2 487 1_555 ? ? ? ? ? ? ? 1.345 ? ? metalc1 metalc ? ? E HOH . O ? ? ? 3_555 D MG . MG B ? A HOH 212 B MG 502 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc2 metalc ? ? B ASP 22 OD1 ? ? ? 1_555 C MG . MG ? ? B ASP 472 B MG 501 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc3 metalc ? ? B ASP 22 OD1 ? ? ? 1_555 C MG . MG ? ? B ASP 472 B MG 501 2_555 ? ? ? ? ? ? ? 2.063 ? ? metalc4 metalc ? ? B GLU 28 OE2 B ? ? 1_555 D MG . MG B ? B GLU 478 B MG 502 1_555 ? ? ? ? ? ? ? 2.022 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 501 B HOH 621 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 501 B HOH 621 2_555 ? ? ? ? ? ? ? 2.105 ? ? metalc7 metalc ? ? D MG . MG B ? ? 1_555 F HOH . O ? ? B MG 502 B HOH 634 1_555 ? ? ? ? ? ? ? 2.047 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 212 ? 3_555 MG B D MG . ? B MG 502 ? 1_555 OE2 B B GLU 28 ? B GLU 478 ? 1_555 161.6 ? 2 O ? E HOH . ? A HOH 212 ? 3_555 MG B D MG . ? B MG 502 ? 1_555 O ? F HOH . ? B HOH 634 ? 1_555 89.1 ? 3 OE2 B B GLU 28 ? B GLU 478 ? 1_555 MG B D MG . ? B MG 502 ? 1_555 O ? F HOH . ? B HOH 634 ? 1_555 89.0 ? 4 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 0.0 ? 5 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 O ? F HOH . ? B HOH 621 ? 1_555 88.8 ? 6 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 O ? F HOH . ? B HOH 621 ? 1_555 88.8 ? 7 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 O ? F HOH . ? B HOH 621 ? 2_555 179.5 ? 8 OD1 ? B ASP 22 ? B ASP 472 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 O ? F HOH . ? B HOH 621 ? 2_555 179.5 ? 9 O ? F HOH . ? B HOH 621 ? 1_555 MG ? C MG . ? B MG 501 ? 1_555 O ? F HOH . ? B HOH 621 ? 2_555 91.7 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 ACE A 1 ? ASN A 2 ? ACE A 142 ? 1_555 ASN A 143 ? 1_555 . . ASN 17 ACE None 'Terminal acetylation' 2 ACE B 1 ? ILE B 2 ? ACE B 451 ? 1_555 ILE B 452 ? 1_555 . . ILE 3 ACE None 'Terminal acetylation' 3 NH2 A 44 ? ASN A 43 ? NH2 A 185 ? 1_555 ASN A 184 ? 1_555 . . ASN 17 NH2 None 'Terminal amidation' 4 NH2 B 37 ? SER B 36 ? NH2 B 487 ? 1_555 SER B 486 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' # _pdbx_entry_details.entry_id 8XNE _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B MG 501 ? C MG . 2 1 A HOH 249 ? E HOH . 3 1 B HOH 638 ? F HOH . 4 1 B HOH 652 ? F HOH . 5 1 B HOH 660 ? F HOH . 6 1 B HOH 665 ? F HOH . 7 1 B HOH 666 ? F HOH . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 249 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.83 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 GLN N N N N 81 GLN CA C N S 82 GLN C C N N 83 GLN O O N N 84 GLN CB C N N 85 GLN CG C N N 86 GLN CD C N N 87 GLN OE1 O N N 88 GLN NE2 N N N 89 GLN OXT O N N 90 GLN H H N N 91 GLN H2 H N N 92 GLN HA H N N 93 GLN HB2 H N N 94 GLN HB3 H N N 95 GLN HG2 H N N 96 GLN HG3 H N N 97 GLN HE21 H N N 98 GLN HE22 H N N 99 GLN HXT H N N 100 GLU N N N N 101 GLU CA C N S 102 GLU C C N N 103 GLU O O N N 104 GLU CB C N N 105 GLU CG C N N 106 GLU CD C N N 107 GLU OE1 O N N 108 GLU OE2 O N N 109 GLU OXT O N N 110 GLU H H N N 111 GLU H2 H N N 112 GLU HA H N N 113 GLU HB2 H N N 114 GLU HB3 H N N 115 GLU HG2 H N N 116 GLU HG3 H N N 117 GLU HE2 H N N 118 GLU HXT H N N 119 GLY N N N N 120 GLY CA C N N 121 GLY C C N N 122 GLY O O N N 123 GLY OXT O N N 124 GLY H H N N 125 GLY H2 H N N 126 GLY HA2 H N N 127 GLY HA3 H N N 128 GLY HXT H N N 129 HOH O O N N 130 HOH H1 H N N 131 HOH H2 H N N 132 ILE N N N N 133 ILE CA C N S 134 ILE C C N N 135 ILE O O N N 136 ILE CB C N S 137 ILE CG1 C N N 138 ILE CG2 C N N 139 ILE CD1 C N N 140 ILE OXT O N N 141 ILE H H N N 142 ILE H2 H N N 143 ILE HA H N N 144 ILE HB H N N 145 ILE HG12 H N N 146 ILE HG13 H N N 147 ILE HG21 H N N 148 ILE HG22 H N N 149 ILE HG23 H N N 150 ILE HD11 H N N 151 ILE HD12 H N N 152 ILE HD13 H N N 153 ILE HXT H N N 154 LEU N N N N 155 LEU CA C N S 156 LEU C C N N 157 LEU O O N N 158 LEU CB C N N 159 LEU CG C N N 160 LEU CD1 C N N 161 LEU CD2 C N N 162 LEU OXT O N N 163 LEU H H N N 164 LEU H2 H N N 165 LEU HA H N N 166 LEU HB2 H N N 167 LEU HB3 H N N 168 LEU HG H N N 169 LEU HD11 H N N 170 LEU HD12 H N N 171 LEU HD13 H N N 172 LEU HD21 H N N 173 LEU HD22 H N N 174 LEU HD23 H N N 175 LEU HXT H N N 176 LYS N N N N 177 LYS CA C N S 178 LYS C C N N 179 LYS O O N N 180 LYS CB C N N 181 LYS CG C N N 182 LYS CD C N N 183 LYS CE C N N 184 LYS NZ N N N 185 LYS OXT O N N 186 LYS H H N N 187 LYS H2 H N N 188 LYS HA H N N 189 LYS HB2 H N N 190 LYS HB3 H N N 191 LYS HG2 H N N 192 LYS HG3 H N N 193 LYS HD2 H N N 194 LYS HD3 H N N 195 LYS HE2 H N N 196 LYS HE3 H N N 197 LYS HZ1 H N N 198 LYS HZ2 H N N 199 LYS HZ3 H N N 200 LYS HXT H N N 201 MET N N N N 202 MET CA C N S 203 MET C C N N 204 MET O O N N 205 MET CB C N N 206 MET CG C N N 207 MET SD S N N 208 MET CE C N N 209 MET OXT O N N 210 MET H H N N 211 MET H2 H N N 212 MET HA H N N 213 MET HB2 H N N 214 MET HB3 H N N 215 MET HG2 H N N 216 MET HG3 H N N 217 MET HE1 H N N 218 MET HE2 H N N 219 MET HE3 H N N 220 MET HXT H N N 221 MG MG MG N N 222 NH2 N N N N 223 NH2 HN1 H N N 224 NH2 HN2 H N N 225 SER N N N N 226 SER CA C N S 227 SER C C N N 228 SER O O N N 229 SER CB C N N 230 SER OG O N N 231 SER OXT O N N 232 SER H H N N 233 SER H2 H N N 234 SER HA H N N 235 SER HB2 H N N 236 SER HB3 H N N 237 SER HG H N N 238 SER HXT H N N 239 THR N N N N 240 THR CA C N S 241 THR C C N N 242 THR O O N N 243 THR CB C N R 244 THR OG1 O N N 245 THR CG2 C N N 246 THR OXT O N N 247 THR H H N N 248 THR H2 H N N 249 THR HA H N N 250 THR HB H N N 251 THR HG1 H N N 252 THR HG21 H N N 253 THR HG22 H N N 254 THR HG23 H N N 255 THR HXT H N N 256 TYR N N N N 257 TYR CA C N S 258 TYR C C N N 259 TYR O O N N 260 TYR CB C N N 261 TYR CG C Y N 262 TYR CD1 C Y N 263 TYR CD2 C Y N 264 TYR CE1 C Y N 265 TYR CE2 C Y N 266 TYR CZ C Y N 267 TYR OH O N N 268 TYR OXT O N N 269 TYR H H N N 270 TYR H2 H N N 271 TYR HA H N N 272 TYR HB2 H N N 273 TYR HB3 H N N 274 TYR HD1 H N N 275 TYR HD2 H N N 276 TYR HE1 H N N 277 TYR HE2 H N N 278 TYR HH H N N 279 TYR HXT H N N 280 VAL N N N N 281 VAL CA C N S 282 VAL C C N N 283 VAL O O N N 284 VAL CB C N N 285 VAL CG1 C N N 286 VAL CG2 C N N 287 VAL OXT O N N 288 VAL H H N N 289 VAL H2 H N N 290 VAL HA H N N 291 VAL HB H N N 292 VAL HG11 H N N 293 VAL HG12 H N N 294 VAL HG13 H N N 295 VAL HG21 H N N 296 VAL HG22 H N N 297 VAL HG23 H N N 298 VAL HXT H N N 299 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HOH O H1 sing N N 122 HOH O H2 sing N N 123 ILE N CA sing N N 124 ILE N H sing N N 125 ILE N H2 sing N N 126 ILE CA C sing N N 127 ILE CA CB sing N N 128 ILE CA HA sing N N 129 ILE C O doub N N 130 ILE C OXT sing N N 131 ILE CB CG1 sing N N 132 ILE CB CG2 sing N N 133 ILE CB HB sing N N 134 ILE CG1 CD1 sing N N 135 ILE CG1 HG12 sing N N 136 ILE CG1 HG13 sing N N 137 ILE CG2 HG21 sing N N 138 ILE CG2 HG22 sing N N 139 ILE CG2 HG23 sing N N 140 ILE CD1 HD11 sing N N 141 ILE CD1 HD12 sing N N 142 ILE CD1 HD13 sing N N 143 ILE OXT HXT sing N N 144 LEU N CA sing N N 145 LEU N H sing N N 146 LEU N H2 sing N N 147 LEU CA C sing N N 148 LEU CA CB sing N N 149 LEU CA HA sing N N 150 LEU C O doub N N 151 LEU C OXT sing N N 152 LEU CB CG sing N N 153 LEU CB HB2 sing N N 154 LEU CB HB3 sing N N 155 LEU CG CD1 sing N N 156 LEU CG CD2 sing N N 157 LEU CG HG sing N N 158 LEU CD1 HD11 sing N N 159 LEU CD1 HD12 sing N N 160 LEU CD1 HD13 sing N N 161 LEU CD2 HD21 sing N N 162 LEU CD2 HD22 sing N N 163 LEU CD2 HD23 sing N N 164 LEU OXT HXT sing N N 165 LYS N CA sing N N 166 LYS N H sing N N 167 LYS N H2 sing N N 168 LYS CA C sing N N 169 LYS CA CB sing N N 170 LYS CA HA sing N N 171 LYS C O doub N N 172 LYS C OXT sing N N 173 LYS CB CG sing N N 174 LYS CB HB2 sing N N 175 LYS CB HB3 sing N N 176 LYS CG CD sing N N 177 LYS CG HG2 sing N N 178 LYS CG HG3 sing N N 179 LYS CD CE sing N N 180 LYS CD HD2 sing N N 181 LYS CD HD3 sing N N 182 LYS CE NZ sing N N 183 LYS CE HE2 sing N N 184 LYS CE HE3 sing N N 185 LYS NZ HZ1 sing N N 186 LYS NZ HZ2 sing N N 187 LYS NZ HZ3 sing N N 188 LYS OXT HXT sing N N 189 MET N CA sing N N 190 MET N H sing N N 191 MET N H2 sing N N 192 MET CA C sing N N 193 MET CA CB sing N N 194 MET CA HA sing N N 195 MET C O doub N N 196 MET C OXT sing N N 197 MET CB CG sing N N 198 MET CB HB2 sing N N 199 MET CB HB3 sing N N 200 MET CG SD sing N N 201 MET CG HG2 sing N N 202 MET CG HG3 sing N N 203 MET SD CE sing N N 204 MET CE HE1 sing N N 205 MET CE HE2 sing N N 206 MET CE HE3 sing N N 207 MET OXT HXT sing N N 208 NH2 N HN1 sing N N 209 NH2 N HN2 sing N N 210 SER N CA sing N N 211 SER N H sing N N 212 SER N H2 sing N N 213 SER CA C sing N N 214 SER CA CB sing N N 215 SER CA HA sing N N 216 SER C O doub N N 217 SER C OXT sing N N 218 SER CB OG sing N N 219 SER CB HB2 sing N N 220 SER CB HB3 sing N N 221 SER OG HG sing N N 222 SER OXT HXT sing N N 223 THR N CA sing N N 224 THR N H sing N N 225 THR N H2 sing N N 226 THR CA C sing N N 227 THR CA CB sing N N 228 THR CA HA sing N N 229 THR C O doub N N 230 THR C OXT sing N N 231 THR CB OG1 sing N N 232 THR CB CG2 sing N N 233 THR CB HB sing N N 234 THR OG1 HG1 sing N N 235 THR CG2 HG21 sing N N 236 THR CG2 HG22 sing N N 237 THR CG2 HG23 sing N N 238 THR OXT HXT sing N N 239 TYR N CA sing N N 240 TYR N H sing N N 241 TYR N H2 sing N N 242 TYR CA C sing N N 243 TYR CA CB sing N N 244 TYR CA HA sing N N 245 TYR C O doub N N 246 TYR C OXT sing N N 247 TYR CB CG sing N N 248 TYR CB HB2 sing N N 249 TYR CB HB3 sing N N 250 TYR CG CD1 doub Y N 251 TYR CG CD2 sing Y N 252 TYR CD1 CE1 sing Y N 253 TYR CD1 HD1 sing N N 254 TYR CD2 CE2 doub Y N 255 TYR CD2 HD2 sing N N 256 TYR CE1 CZ doub Y N 257 TYR CE1 HE1 sing N N 258 TYR CE2 CZ sing Y N 259 TYR CE2 HE2 sing N N 260 TYR CZ OH sing N N 261 TYR OH HH sing N N 262 TYR OXT HXT sing N N 263 VAL N CA sing N N 264 VAL N H sing N N 265 VAL N H2 sing N N 266 VAL CA C sing N N 267 VAL CA CB sing N N 268 VAL CA HA sing N N 269 VAL C O doub N N 270 VAL C OXT sing N N 271 VAL CB CG1 sing N N 272 VAL CB CG2 sing N N 273 VAL CB HB sing N N 274 VAL CG1 HG11 sing N N 275 VAL CG1 HG12 sing N N 276 VAL CG1 HG13 sing N N 277 VAL CG2 HG21 sing N N 278 VAL CG2 HG22 sing N N 279 VAL CG2 HG23 sing N N 280 VAL OXT HXT sing N N 281 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan JP16H05346 1 'Japan Society for the Promotion of Science (JSPS)' Japan JP18H02555 2 'Japan Society for the Promotion of Science (JSPS)' Japan JP19H03701 3 'Japan Society for the Promotion of Science (JSPS)' Japan JP21K19366 4 'Japan Agency for Medical Research and Development (AMED)' Japan JP20ak0101140 5 'Other private' Japan ? 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SVF _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8XNE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.035080 _atom_sites.fract_transf_matrix[1][2] 0.020254 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.040507 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002580 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 MG 12 12 5.427 2.828 2.176 79.261 1.228 0.381 2.310 7.194 0.859 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_