HEADER TRANSCRIPTION 12-JAN-24 8XU0 TITLE CLOSTRIDIOIDES DIFFICILE MARR (WP_003434724) WITH SALICYLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MARR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: WP_003434724; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MARR; COMPND 8 CHAIN: B, C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE; SOURCE 3 ORGANISM_TAXID: 1496; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE; SOURCE 8 ORGANISM_TAXID: 1496; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MARR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.PARK,N.KWON REVDAT 1 20-NOV-24 8XU0 0 JRNL AUTH N.KWON,S.RHO,S.C.HA,S.PARK JRNL TITL CRYSTAL STRUCTURE OF A CLOSTRIDIOIDES DIFFICILE MULTIPLE JRNL TITL 2 ANTIBIOTIC RESISTANCE REGULATOR (MARR) CD0473 SUGGESTS A JRNL TITL 3 POTENTIAL REDOX-REGULATED FUNCTION. JRNL REF INT.J.BIOL.MACROMOL. V. 280 36036 2024 JRNL REFN ISSN 0141-8130 JRNL PMID 39332572 JRNL DOI 10.1016/J.IJBIOMAC.2024.136036 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 49824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2673 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3560 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 216 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4610 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.56000 REMARK 3 B22 (A**2) : -1.04000 REMARK 3 B33 (A**2) : -1.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.259 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4712 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4645 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6317 ; 2.051 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10750 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 559 ; 7.037 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 218 ;38.593 ;24.908 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 971 ;21.291 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;19.969 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 722 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5116 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 995 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2248 ; 5.628 ; 5.517 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2247 ; 5.629 ; 5.516 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2803 ; 7.913 ; 8.245 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2804 ; 7.913 ; 8.246 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2463 ; 6.785 ; 6.158 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2462 ; 6.787 ; 6.157 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3514 ;10.088 ; 8.924 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5538 ;12.693 ;42.923 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5522 ;12.694 ;42.917 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8XU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1300044154. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52642 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 95.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0 M NACL, 0.1 M SODIUM ACETATE PH REMARK 280 4.5, AND 10 MM DTT, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 87.72800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.58600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 87.72800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.58600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 LYS A 141 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 LYS B 141 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 LYS C 141 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 LYS D 141 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A -1 O HOH A 201 1.98 REMARK 500 O HOH B 302 O HOH B 329 2.04 REMARK 500 OG SER A 54 OD1 ASP A 57 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A -1 CB SER A -1 OG 0.120 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 63 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 138 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 138 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 138 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LEU C 43 CB - CG - CD1 ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG D 91 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG D 91 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG D 92 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG D 92 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG D 138 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 0 76.80 -119.01 REMARK 500 GLN A 50 84.31 -152.96 REMARK 500 ILE A 56 -71.21 -61.61 REMARK 500 CYS A 63 -40.26 62.56 REMARK 500 ASP A 65 121.33 -26.98 REMARK 500 LYS A 89 -68.65 -134.18 REMARK 500 CYS B 63 -6.18 73.97 REMARK 500 VAL B 86 118.57 -28.88 REMARK 500 ASP B 90 -172.46 128.84 REMARK 500 CYS C 63 -44.05 87.97 REMARK 500 ASP C 90 134.57 120.42 REMARK 500 SER C 123 7.29 -66.24 REMARK 500 ASP D 3 128.46 -178.78 REMARK 500 CYS D 63 4.03 -63.16 REMARK 500 ILE D 139 106.17 -50.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 63 LYS A 64 -138.80 REMARK 500 LYS B 85 VAL B 86 149.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 351 DISTANCE = 5.94 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8XTA RELATED DB: PDB DBREF 8XU0 A -19 141 PDB 8XU0 8XU0 -19 141 DBREF 8XU0 B -2 141 PDB 8XU0 8XU0 -2 141 DBREF 8XU0 C -2 141 PDB 8XU0 8XU0 -2 141 DBREF 8XU0 D -2 141 PDB 8XU0 8XU0 -2 141 SEQRES 1 A 161 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 161 LEU VAL PRO ARG GLY SER HIS MET LYS ASP PHE GLU LYS SEQRES 3 A 161 LEU TYR GLU ALA THR THR LYS LEU VAL SER THR SER LEU SEQRES 4 A 161 LYS VAL LYS ASP ASP LEU LYS LYS MET PHE LYS GLN ASN SEQRES 5 A 161 GLY TYR ASP ILE THR THR ASP HIS TYR ALA LEU LEU ARG SEQRES 6 A 161 PHE LEU TRP GLU GLN ASP GLY ILE SER GLN ILE ASP LEU SEQRES 7 A 161 CYS GLU LYS SER CYS LYS ASP LYS SER ASN THR THR ARG SEQRES 8 A 161 ILE LEU ASP VAL MET LYS ASN LYS GLY LEU ILE VAL ARG SEQRES 9 A 161 LYS VAL ASP VAL LYS ASP ARG ARG LYS PHE GLN ILE PHE SEQRES 10 A 161 LEU THR ASP LEU GLY ARG GLU LEU GLU GLU PRO LEU ASN SEQRES 11 A 161 GLU ILE ALA SER ILE TYR ALA THR GLU THR PHE LYS SER SEQRES 12 A 161 ILE SER ASP GLU GLU LEU PRO LEU PHE THR ASP ILE LEU SEQRES 13 A 161 ASP ARG ILE GLY LYS SEQRES 1 B 144 GLY SER HIS MET LYS ASP PHE GLU LYS LEU TYR GLU ALA SEQRES 2 B 144 THR THR LYS LEU VAL SER THR SER LEU LYS VAL LYS ASP SEQRES 3 B 144 ASP LEU LYS LYS MET PHE LYS GLN ASN GLY TYR ASP ILE SEQRES 4 B 144 THR THR ASP HIS TYR ALA LEU LEU ARG PHE LEU TRP GLU SEQRES 5 B 144 GLN ASP GLY ILE SER GLN ILE ASP LEU CYS GLU LYS SER SEQRES 6 B 144 CYS LYS ASP LYS SER ASN THR THR ARG ILE LEU ASP VAL SEQRES 7 B 144 MET LYS ASN LYS GLY LEU ILE VAL ARG LYS VAL ASP VAL SEQRES 8 B 144 LYS ASP ARG ARG LYS PHE GLN ILE PHE LEU THR ASP LEU SEQRES 9 B 144 GLY ARG GLU LEU GLU GLU PRO LEU ASN GLU ILE ALA SER SEQRES 10 B 144 ILE TYR ALA THR GLU THR PHE LYS SER ILE SER ASP GLU SEQRES 11 B 144 GLU LEU PRO LEU PHE THR ASP ILE LEU ASP ARG ILE GLY SEQRES 12 B 144 LYS SEQRES 1 C 144 GLY SER HIS MET LYS ASP PHE GLU LYS LEU TYR GLU ALA SEQRES 2 C 144 THR THR LYS LEU VAL SER THR SER LEU LYS VAL LYS ASP SEQRES 3 C 144 ASP LEU LYS LYS MET PHE LYS GLN ASN GLY TYR ASP ILE SEQRES 4 C 144 THR THR ASP HIS TYR ALA LEU LEU ARG PHE LEU TRP GLU SEQRES 5 C 144 GLN ASP GLY ILE SER GLN ILE ASP LEU CYS GLU LYS SER SEQRES 6 C 144 CYS LYS ASP LYS SER ASN THR THR ARG ILE LEU ASP VAL SEQRES 7 C 144 MET LYS ASN LYS GLY LEU ILE VAL ARG LYS VAL ASP VAL SEQRES 8 C 144 LYS ASP ARG ARG LYS PHE GLN ILE PHE LEU THR ASP LEU SEQRES 9 C 144 GLY ARG GLU LEU GLU GLU PRO LEU ASN GLU ILE ALA SER SEQRES 10 C 144 ILE TYR ALA THR GLU THR PHE LYS SER ILE SER ASP GLU SEQRES 11 C 144 GLU LEU PRO LEU PHE THR ASP ILE LEU ASP ARG ILE GLY SEQRES 12 C 144 LYS SEQRES 1 D 144 GLY SER HIS MET LYS ASP PHE GLU LYS LEU TYR GLU ALA SEQRES 2 D 144 THR THR LYS LEU VAL SER THR SER LEU LYS VAL LYS ASP SEQRES 3 D 144 ASP LEU LYS LYS MET PHE LYS GLN ASN GLY TYR ASP ILE SEQRES 4 D 144 THR THR ASP HIS TYR ALA LEU LEU ARG PHE LEU TRP GLU SEQRES 5 D 144 GLN ASP GLY ILE SER GLN ILE ASP LEU CYS GLU LYS SER SEQRES 6 D 144 CYS LYS ASP LYS SER ASN THR THR ARG ILE LEU ASP VAL SEQRES 7 D 144 MET LYS ASN LYS GLY LEU ILE VAL ARG LYS VAL ASP VAL SEQRES 8 D 144 LYS ASP ARG ARG LYS PHE GLN ILE PHE LEU THR ASP LEU SEQRES 9 D 144 GLY ARG GLU LEU GLU GLU PRO LEU ASN GLU ILE ALA SER SEQRES 10 D 144 ILE TYR ALA THR GLU THR PHE LYS SER ILE SER ASP GLU SEQRES 11 D 144 GLU LEU PRO LEU PHE THR ASP ILE LEU ASP ARG ILE GLY SEQRES 12 D 144 LYS HET SAL B 201 10 HET SAL B 202 10 HET SAL C 201 10 HET SAL C 202 10 HETNAM SAL 2-HYDROXYBENZOIC ACID HETSYN SAL SALICYLIC ACID FORMUL 5 SAL 4(C7 H6 O3) FORMUL 9 HOH *113(H2 O) HELIX 1 AA1 ASP A 3 LYS A 26 1 24 HELIX 2 AA2 PHE A 29 GLY A 33 5 5 HELIX 3 AA3 THR A 37 GLN A 50 1 14 HELIX 4 AA4 SER A 54 SER A 62 1 9 HELIX 5 AA5 ASP A 65 LYS A 79 1 15 HELIX 6 AA6 THR A 99 LEU A 105 1 7 HELIX 7 AA7 LEU A 105 PHE A 121 1 17 HELIX 8 AA8 GLU A 127 ILE A 139 1 13 HELIX 9 AA9 ASP B 3 ASN B 32 1 30 HELIX 10 AB1 THR B 37 GLN B 50 1 14 HELIX 11 AB2 GLN B 55 SER B 62 1 8 HELIX 12 AB3 ASP B 65 LYS B 79 1 15 HELIX 13 AB4 THR B 99 LEU B 105 1 7 HELIX 14 AB5 LEU B 105 PHE B 121 1 17 HELIX 15 AB6 GLU B 127 ILE B 139 1 13 HELIX 16 AB7 ASP C 3 ASN C 32 1 30 HELIX 17 AB8 THR C 37 GLN C 50 1 14 HELIX 18 AB9 GLN C 55 SER C 62 1 8 HELIX 19 AC1 ASP C 65 LYS C 79 1 15 HELIX 20 AC2 THR C 99 LEU C 105 1 7 HELIX 21 AC3 LEU C 105 PHE C 121 1 17 HELIX 22 AC4 GLU C 127 ILE C 139 1 13 HELIX 23 AC5 ASP D 3 ASN D 32 1 30 HELIX 24 AC6 THR D 37 GLN D 50 1 14 HELIX 25 AC7 GLN D 55 SER D 62 1 8 HELIX 26 AC8 ASP D 65 LYS D 79 1 15 HELIX 27 AC9 THR D 99 LEU D 105 1 7 HELIX 28 AD1 LEU D 105 PHE D 121 1 17 HELIX 29 AD2 SER D 125 GLU D 127 5 3 HELIX 30 AD3 GLU D 128 ILE D 139 1 12 SHEET 1 AA1 2 ILE A 82 VAL A 86 0 SHEET 2 AA1 2 PHE A 94 LEU A 98 -1 O PHE A 97 N VAL A 83 SHEET 1 AA2 3 ILE B 53 SER B 54 0 SHEET 2 AA2 3 PHE B 94 LEU B 98 -1 O ILE B 96 N ILE B 53 SHEET 3 AA2 3 ILE B 82 VAL B 86 -1 N VAL B 83 O PHE B 97 SHEET 1 AA3 3 ILE C 53 SER C 54 0 SHEET 2 AA3 3 PHE C 94 LEU C 98 -1 O ILE C 96 N ILE C 53 SHEET 3 AA3 3 ILE C 82 VAL C 86 -1 N VAL C 83 O PHE C 97 SHEET 1 AA4 3 ILE D 53 SER D 54 0 SHEET 2 AA4 3 PHE D 94 LEU D 98 -1 O ILE D 96 N ILE D 53 SHEET 3 AA4 3 ILE D 82 VAL D 86 -1 N LYS D 85 O GLN D 95 CRYST1 175.456 69.172 95.125 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005699 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014457 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010512 0.00000