HEADER PROTEIN BINDING 05-MAR-24 8YKU TITLE PATHIL IN COMPLEX WITH AMP-PNP AND TMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIAMINE-MONOPHOSPHATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THIAMINE-PHOSPHATE KINASE; COMPND 5 EC: 2.7.4.16; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: THIL, CAZ10_30480, DY930_26150, FDK04_05055, IPC116_27470, SOURCE 5 IPC1323_04495, IPC1509_03965, IPC582_16370, IPC620_29520, SOURCE 6 NCTC13621_06786; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, PROTEIN BINDING, KINASE EXPDTA X-RAY DIFFRACTION AUTHOR J.Q.LIN,Z.CHUNG,J.LESCAR REVDAT 1 07-AUG-24 8YKU 0 JRNL AUTH J.Q.LIN,J.LESCAR JRNL TITL THIL IN COMPLEX WITH AMP-PNP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX VERSION 1.18.2-3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.3500 - 5.8800 1.00 2619 141 0.1819 0.1956 REMARK 3 2 5.8800 - 4.6700 1.00 2612 140 0.1678 0.1763 REMARK 3 3 4.6700 - 4.0800 1.00 2613 138 0.1362 0.1570 REMARK 3 4 4.0800 - 3.7100 1.00 2606 137 0.1566 0.1369 REMARK 3 5 3.7100 - 3.4400 1.00 2622 143 0.1595 0.1472 REMARK 3 6 3.4400 - 3.2400 1.00 2619 135 0.1685 0.1839 REMARK 3 7 3.2400 - 3.0800 1.00 2626 138 0.1619 0.1524 REMARK 3 8 3.0800 - 2.9400 1.00 2602 130 0.1649 0.2032 REMARK 3 9 2.9400 - 2.8300 1.00 2597 135 0.1678 0.1675 REMARK 3 10 2.8300 - 2.7300 1.00 2629 141 0.1747 0.2018 REMARK 3 11 2.7300 - 2.6500 1.00 2599 144 0.1694 0.1620 REMARK 3 12 2.6500 - 2.5700 1.00 2610 138 0.1762 0.2387 REMARK 3 13 2.5700 - 2.5000 1.00 2628 140 0.1733 0.1938 REMARK 3 14 2.5000 - 2.4400 1.00 2607 146 0.1761 0.1715 REMARK 3 15 2.4400 - 2.3900 1.00 2615 138 0.1833 0.1692 REMARK 3 16 2.3900 - 2.3400 1.00 2614 133 0.1950 0.2148 REMARK 3 17 2.3400 - 2.2900 1.00 2618 140 0.1930 0.1747 REMARK 3 18 2.2900 - 2.2500 1.00 2579 138 0.1962 0.1929 REMARK 3 19 2.2500 - 2.2100 1.00 2614 141 0.1978 0.2224 REMARK 3 20 2.2100 - 2.1700 0.99 2601 138 0.2065 0.2178 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.156 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2313 REMARK 3 ANGLE : 0.925 3142 REMARK 3 CHIRALITY : 0.050 360 REMARK 3 PLANARITY : 0.005 408 REMARK 3 DIHEDRAL : 24.340 816 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8YKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1300045867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953721724543 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 51.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 33.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE HYDRATE, 0.1M REMARK 280 SODIUM CACODYLATE PH 6.5, 40% (V/V) PEG 300, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.95667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.91333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.93500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 109.89167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.97833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.95667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 87.91333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 109.89167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.93500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.97833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -207.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 59.29500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -102.70195 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 21.97833 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 ILE A 308 REMARK 465 PRO A 309 REMARK 465 ALA A 310 REMARK 465 ALA A 311 REMARK 465 ALA A 312 REMARK 465 GLY A 313 REMARK 465 TYR A 314 REMARK 465 GLN A 315 REMARK 465 HIS A 316 REMARK 465 PHE A 317 REMARK 465 GLY A 318 REMARK 465 THR A 319 REMARK 465 GLN A 320 REMARK 465 ARG A 321 REMARK 465 ASP A 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 84 -61.50 -128.02 REMARK 500 LYS A 205 -55.17 -127.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 409 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 29 OD2 REMARK 620 2 ASP A 30 OD2 72.9 REMARK 620 3 ALA A 78 O 65.7 75.4 REMARK 620 4 LEU A 144 O 70.9 78.7 5.6 REMARK 620 5 ALA A 209 O 68.8 73.6 4.0 5.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 O REMARK 620 2 SER A 45 OG 109.8 REMARK 620 3 ASP A 75 OD1 113.4 3.8 REMARK 620 4 ANP A 411 O2B 114.0 8.5 8.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 OD1 REMARK 620 2 ASP A 75 OD2 111.9 REMARK 620 3 ASP A 211 OD1 113.4 2.4 REMARK 620 4 ANP A 411 O2G 118.5 6.6 5.4 REMARK 620 5 ANP A 411 O1B 116.4 7.1 7.9 5.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD2 REMARK 620 2 ASP A 122 OD1 63.8 REMARK 620 3 ASP A 122 OD2 68.7 4.9 REMARK 620 4 ANP A 411 O1G 74.3 126.2 129.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD1 REMARK 620 2 ASP A 47 OD2 52.4 REMARK 620 3 ASP A 75 OD1 93.9 129.4 REMARK 620 4 ANP A 411 O1G 121.7 70.4 117.2 REMARK 620 5 ANP A 411 O2G 178.0 129.6 84.9 60.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 180 OE1 REMARK 620 2 GLU A 180 OE2 52.3 REMARK 620 3 GLU A 183 OE1 104.3 84.2 REMARK 620 4 GLU A 183 OE2 76.5 100.0 51.2 REMARK 620 5 GLU A 273 O 59.2 108.1 93.9 42.6 REMARK 620 6 GLU A 277 OE1 60.9 110.6 95.8 44.7 3.0 REMARK 620 7 GLU A 277 OE2 61.8 112.1 97.9 46.8 5.5 2.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 214 OD2 REMARK 620 2 TPS A 410 O2 86.0 REMARK 620 3 TPS A 410 O3 99.7 57.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 214 OD1 REMARK 620 2 ASP A 219 OD1 96.5 REMARK 620 N 1 DBREF1 8YKU A 1 322 UNP A0A232BM78_PSEAI DBREF2 8YKU A A0A232BM78 1 322 SEQADV 8YKU MET A -21 UNP A0A232BM7 INITIATING METHIONINE SEQADV 8YKU HIS A -20 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU HIS A -19 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU HIS A -18 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU HIS A -17 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU HIS A -16 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU HIS A -15 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU SER A -14 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU SER A -13 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU GLY A -12 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU VAL A -11 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU ASP A -10 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU LEU A -9 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU GLY A -8 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU THR A -7 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU GLU A -6 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU ASN A -5 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU LEU A -4 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU TYR A -3 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU PHE A -2 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU GLN A -1 UNP A0A232BM7 EXPRESSION TAG SEQADV 8YKU SER A 0 UNP A0A232BM7 EXPRESSION TAG SEQRES 1 A 344 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 344 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLY GLU PHE SEQRES 3 A 344 GLU LEU ILE ARG ARG PHE PHE ALA ALA ALA ALA CYS ALA SEQRES 4 A 344 ALA PRO ALA ALA ASP VAL ALA LEU GLY ILE GLY ASP ASP SEQRES 5 A 344 CYS ALA LEU LEU ALA PRO PRO ALA GLY GLU GLN LEU ALA SEQRES 6 A 344 VAL SER THR ASP THR LEU VAL GLU GLY VAL HIS PHE PRO SEQRES 7 A 344 ALA GLY CYS ASP PRO PHE LEU LEU ALA GLN ARG ALA LEU SEQRES 8 A 344 ALA VAL SER ALA SER ASP LEU ALA ALA MET GLY ALA ALA SEQRES 9 A 344 PRO LEU ALA PHE THR LEU ALA LEU THR LEU PRO GLN ALA SEQRES 10 A 344 ASP ALA GLU TRP LEU GLN GLY PHE ALA ARG GLY LEU ASP SEQRES 11 A 344 ALA MET ALA ARG GLN CYS GLY LEU ALA LEU VAL GLY GLY SEQRES 12 A 344 ASP THR THR ARG GLY PRO LEU SER MET THR LEU THR VAL SEQRES 13 A 344 PHE GLY ARG VAL PRO ALA GLY GLN ALA LEU THR ARG ALA SEQRES 14 A 344 GLY ALA ARG PRO GLY ASP LEU LEU CYS VAL GLY GLY PRO SEQRES 15 A 344 LEU GLY GLU ALA GLY ALA ALA LEU GLU LEU VAL LEU GLU SEQRES 16 A 344 ARG ARG SER ALA PRO ALA GLU VAL ALA GLU PRO LEU LEU SEQRES 17 A 344 ALA ARG TYR TRP THR PRO ALA PRO GLN PHE GLY LEU GLY SEQRES 18 A 344 LEU ALA LEU ARG GLY LYS ALA SER ALA ALA LEU ASP ILE SEQRES 19 A 344 SER ASP GLY LEU LEU ALA ASP CYS GLY HIS ILE ALA ARG SEQRES 20 A 344 ALA SER GLY VAL ALA LEU LEU VAL GLU CYS GLN ARG LEU SEQRES 21 A 344 GLN ALA SER ALA ALA LEU SER GLY LEU LEU ALA GLY GLU SEQRES 22 A 344 GLU ALA LEU ARG GLN GLN LEU ALA ALA GLY ASP ASP TYR SEQRES 23 A 344 VAL LEU VAL PHE THR LEU PRO PRO GLU TYR LEU GLY GLU SEQRES 24 A 344 ILE ARG ALA ALA TRP PRO ALA MET ALA VAL ILE GLY ARG SEQRES 25 A 344 VAL GLU ALA GLY GLN GLY VAL HIS LEU LEU ASP ALA ASP SEQRES 26 A 344 GLY LYS GLU LEU ILE PRO ALA ALA ALA GLY TYR GLN HIS SEQRES 27 A 344 PHE GLY THR GLN ARG ASP HET ACT A 401 4 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET CA A 407 1 HET CA A 408 1 HET CA A 409 1 HET TPS A 410 22 HET ANP A 411 31 HET PG4 A 412 13 HET PEG A 413 7 HET EDO A 414 4 HET ACT A 415 4 HET PG4 A 416 13 HET EDO A 417 4 HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM TPS THIAMIN PHOSPHATE HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 3 CA 8(CA 2+) FORMUL 11 TPS C12 H18 N4 O4 P S 1+ FORMUL 12 ANP C10 H17 N6 O12 P3 FORMUL 13 PG4 2(C8 H18 O5) FORMUL 14 PEG C4 H10 O3 FORMUL 15 EDO 2(C2 H6 O2) FORMUL 19 HOH *202(H2 O) HELIX 1 AA1 PHE A 4 PHE A 11 1 8 HELIX 2 AA2 ALA A 14 ALA A 18 5 5 HELIX 3 AA3 ASP A 60 ALA A 78 1 19 HELIX 4 AA4 ASP A 96 GLY A 115 1 20 HELIX 5 AA5 GLY A 162 LEU A 172 1 11 HELIX 6 AA6 PRO A 178 THR A 191 1 14 HELIX 7 AA7 GLN A 195 ARG A 203 1 9 HELIX 8 AA8 GLY A 215 GLY A 228 1 14 HELIX 9 AA9 GLN A 236 LEU A 238 5 3 HELIX 10 AB1 SER A 241 GLY A 246 1 6 HELIX 11 AB2 ALA A 249 ALA A 260 1 12 HELIX 12 AB3 PRO A 271 GLU A 273 5 3 HELIX 13 AB4 TYR A 274 TRP A 282 1 9 SHEET 1 AA1 2 VAL A 23 LEU A 25 0 SHEET 2 AA1 2 LEU A 33 LEU A 34 -1 O LEU A 33 N LEU A 25 SHEET 1 AA2 4 GLN A 41 VAL A 50 0 SHEET 2 AA2 4 SER A 129 VAL A 138 -1 O VAL A 138 N GLN A 41 SHEET 3 AA2 4 ALA A 82 LEU A 92 -1 N ALA A 82 O ARG A 137 SHEET 4 AA2 4 ALA A 117 ARG A 125 1 O ASP A 122 N LEU A 90 SHEET 1 AA3 6 ALA A 208 ASP A 211 0 SHEET 2 AA3 6 LEU A 266 LEU A 270 -1 O VAL A 267 N LEU A 210 SHEET 3 AA3 6 LEU A 154 VAL A 157 -1 N LEU A 154 O LEU A 270 SHEET 4 AA3 6 ALA A 286 GLU A 292 -1 O ILE A 288 N LEU A 155 SHEET 5 AA3 6 ALA A 230 GLU A 234 -1 N GLU A 234 O ILE A 288 SHEET 6 AA3 6 GLY A 296 LEU A 300 1 O HIS A 298 N VAL A 233 LINK OD2 ASP A 29 CA CA A 409 1555 12545 2.55 LINK O ASP A 30 CA CA A 403 1555 12545 2.45 LINK OD1 ASP A 30 CA CA A 406 1555 12545 2.42 LINK OD2 ASP A 30 CA CA A 409 1555 12545 2.51 LINK OG SER A 45 CA CA A 403 1555 1555 2.43 LINK OD2 ASP A 47 CA CA A 404 1555 1555 2.34 LINK OD1 ASP A 47 CA CA A 405 1555 1555 2.43 LINK OD2 ASP A 47 CA CA A 405 1555 1555 2.53 LINK OD1 ASP A 75 CA CA A 403 1555 1555 2.41 LINK OD1 ASP A 75 CA CA A 405 1555 1555 2.44 LINK OD2 ASP A 75 CA CA A 406 1555 1555 2.26 LINK O ALA A 78 CA CA A 409 1555 1555 2.59 LINK OD1 ASP A 122 CA CA A 404 1555 12545 2.48 LINK OD2 ASP A 122 CA CA A 404 1555 12545 2.57 LINK O LEU A 144 CA CA A 409 1555 1555 2.46 LINK OE1 GLU A 180 CA CA A 402 1555 1555 2.55 LINK OE2 GLU A 180 CA CA A 402 1555 1555 2.44 LINK OE1 GLU A 183 CA CA A 402 1555 1555 2.61 LINK OE2 GLU A 183 CA CA A 402 1555 1555 2.45 LINK O ALA A 209 CA CA A 409 1555 1555 2.50 LINK OD1 ASP A 211 CA CA A 406 1555 1555 2.29 LINK OD2 ASP A 214 CA CA A 407 1555 1555 2.34 LINK OD1 ASP A 214 CA CA A 408 1555 1555 2.31 LINK OD1 ASP A 219 CA CA A 408 1555 1555 2.34 LINK O GLU A 273 CA CA A 402 1555 10554 2.41 LINK OE1 GLU A 277 CA CA A 402 1555 10554 2.41 LINK OE2 GLU A 277 CA CA A 402 1555 10554 2.39 LINK CA CA A 403 O2B ANP A 411 1555 1555 2.22 LINK CA CA A 404 O1G ANP A 411 1555 1555 2.38 LINK CA CA A 405 O1G ANP A 411 1555 1555 2.42 LINK CA CA A 405 O2G ANP A 411 1555 1555 2.46 LINK CA CA A 406 O2G ANP A 411 1555 1555 2.33 LINK CA CA A 406 O1B ANP A 411 1555 1555 2.31 LINK CA CA A 407 O2 TPS A 410 1555 1555 2.75 LINK CA CA A 407 O3 TPS A 410 1555 1555 2.30 CRYST1 118.590 118.590 131.870 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008432 0.004868 0.000000 0.00000 SCALE2 0.000000 0.009737 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007583 0.00000