data_8YQQ # _entry.id 8YQQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YQQ pdb_00008yqq 10.2210/pdb8yqq/pdb WWPDB D_1300046209 ? ? EMDB EMD-39502 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-08-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YQQ _pdbx_database_status.recvd_initial_deposition_date 2024-03-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of HKU1B RBD with TMPRSS2' _pdbx_database_related.db_id EMD-39502 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email cui.sheng@ipb.pumc.edu.cn _pdbx_contact_author.name_first Sheng _pdbx_contact_author.name_last Cui _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6329-3582 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gao, X.' 1 ? 'Cui, S.' 2 ? 'Ding, W.' 3 ? 'Zhu, K.' 4 ? 'Shang, K.' 5 ? 'Zhu, H.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Discov' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2056-5968 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 84 _citation.page_last 84 _citation.title 'Structural basis for the interaction between human coronavirus HKU1 spike receptor binding domain and its receptor TMPRSS2.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41421-024-00717-5 _citation.pdbx_database_id_PubMed 39112468 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, X.' 1 ? primary 'Zhu, K.' 2 ? primary 'Wang, L.' 3 ? primary 'Shang, K.' 4 ? primary 'Hua, L.' 5 ? primary 'Qin, B.' 6 ? primary 'Zhu, H.' 7 ? primary 'Ding, W.' 8 0000-0003-4368-8215 primary 'Cui, S.' 9 0000-0001-6329-3582 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 31703.457 1 ? ? ? ;Sequence reference for Candidatus Accumulibacter adiacens (2954378) is not available in UniProt at the time of biocuration. Current sequence reference is from UniProt ID Q0ZME7. ; 2 polymer man 'Transmembrane protease serine 2' 42381.848 1 3.4.21.122 ? ? ? 3 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 6 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Serine protease 10' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NLPDCDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQ LGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVV NSCAKSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNH SSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDL ; ;NLPDCDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQ LGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVV NSCAKSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNH SSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDL ; A ? 2 'polypeptide(L)' no no ;MGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDM GYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWP WQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIAL MKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAG FLQGNVDSCQGDAGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG ; ;MGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDM GYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWP WQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIAL MKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAG FLQGNVDSCQGDAGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG ; B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 PRO n 1 4 ASP n 1 5 CYS n 1 6 ASP n 1 7 ILE n 1 8 ASP n 1 9 ASN n 1 10 TRP n 1 11 LEU n 1 12 ASN n 1 13 ASN n 1 14 VAL n 1 15 SER n 1 16 VAL n 1 17 PRO n 1 18 SER n 1 19 PRO n 1 20 LEU n 1 21 ASN n 1 22 TRP n 1 23 GLU n 1 24 ARG n 1 25 ARG n 1 26 ILE n 1 27 PHE n 1 28 SER n 1 29 ASN n 1 30 CYS n 1 31 ASN n 1 32 PHE n 1 33 ASN n 1 34 LEU n 1 35 SER n 1 36 THR n 1 37 LEU n 1 38 LEU n 1 39 ARG n 1 40 LEU n 1 41 VAL n 1 42 HIS n 1 43 VAL n 1 44 ASP n 1 45 SER n 1 46 PHE n 1 47 SER n 1 48 CYS n 1 49 ASN n 1 50 ASN n 1 51 LEU n 1 52 ASP n 1 53 LYS n 1 54 SER n 1 55 LYS n 1 56 ILE n 1 57 PHE n 1 58 GLY n 1 59 SER n 1 60 CYS n 1 61 PHE n 1 62 ASN n 1 63 SER n 1 64 ILE n 1 65 THR n 1 66 VAL n 1 67 ASP n 1 68 LYS n 1 69 PHE n 1 70 ALA n 1 71 ILE n 1 72 PRO n 1 73 ASN n 1 74 ARG n 1 75 ARG n 1 76 ARG n 1 77 ASP n 1 78 ASP n 1 79 LEU n 1 80 GLN n 1 81 LEU n 1 82 GLY n 1 83 SER n 1 84 SER n 1 85 GLY n 1 86 PHE n 1 87 LEU n 1 88 GLN n 1 89 SER n 1 90 SER n 1 91 ASN n 1 92 TYR n 1 93 LYS n 1 94 ILE n 1 95 ASP n 1 96 ILE n 1 97 SER n 1 98 SER n 1 99 SER n 1 100 SER n 1 101 CYS n 1 102 GLN n 1 103 LEU n 1 104 TYR n 1 105 TYR n 1 106 SER n 1 107 LEU n 1 108 PRO n 1 109 LEU n 1 110 VAL n 1 111 ASN n 1 112 VAL n 1 113 THR n 1 114 ILE n 1 115 ASN n 1 116 ASN n 1 117 PHE n 1 118 ASN n 1 119 PRO n 1 120 SER n 1 121 SER n 1 122 TRP n 1 123 ASN n 1 124 ARG n 1 125 ARG n 1 126 TYR n 1 127 GLY n 1 128 PHE n 1 129 GLY n 1 130 SER n 1 131 PHE n 1 132 ASN n 1 133 LEU n 1 134 SER n 1 135 SER n 1 136 TYR n 1 137 ASP n 1 138 VAL n 1 139 VAL n 1 140 TYR n 1 141 SER n 1 142 ASP n 1 143 HIS n 1 144 CYS n 1 145 PHE n 1 146 SER n 1 147 VAL n 1 148 ASN n 1 149 SER n 1 150 ASP n 1 151 PHE n 1 152 CYS n 1 153 PRO n 1 154 CYS n 1 155 ALA n 1 156 ASP n 1 157 PRO n 1 158 SER n 1 159 VAL n 1 160 VAL n 1 161 ASN n 1 162 SER n 1 163 CYS n 1 164 ALA n 1 165 LYS n 1 166 SER n 1 167 LYS n 1 168 PRO n 1 169 PRO n 1 170 SER n 1 171 ALA n 1 172 ILE n 1 173 CYS n 1 174 PRO n 1 175 ALA n 1 176 GLY n 1 177 THR n 1 178 LYS n 1 179 TYR n 1 180 ARG n 1 181 HIS n 1 182 CYS n 1 183 ASP n 1 184 LEU n 1 185 ASP n 1 186 THR n 1 187 THR n 1 188 LEU n 1 189 TYR n 1 190 VAL n 1 191 LYS n 1 192 ASN n 1 193 TRP n 1 194 CYS n 1 195 ARG n 1 196 CYS n 1 197 SER n 1 198 CYS n 1 199 LEU n 1 200 PRO n 1 201 ASP n 1 202 PRO n 1 203 ILE n 1 204 SER n 1 205 THR n 1 206 TYR n 1 207 SER n 1 208 PRO n 1 209 ASN n 1 210 THR n 1 211 CYS n 1 212 PRO n 1 213 GLN n 1 214 LYS n 1 215 LYS n 1 216 VAL n 1 217 VAL n 1 218 VAL n 1 219 GLY n 1 220 ILE n 1 221 GLY n 1 222 GLU n 1 223 HIS n 1 224 CYS n 1 225 PRO n 1 226 GLY n 1 227 LEU n 1 228 GLY n 1 229 ILE n 1 230 ASN n 1 231 GLU n 1 232 GLU n 1 233 LYS n 1 234 CYS n 1 235 GLY n 1 236 THR n 1 237 GLN n 1 238 LEU n 1 239 ASN n 1 240 HIS n 1 241 SER n 1 242 SER n 1 243 CYS n 1 244 PHE n 1 245 CYS n 1 246 SER n 1 247 PRO n 1 248 ASP n 1 249 ALA n 1 250 PHE n 1 251 LEU n 1 252 GLY n 1 253 TRP n 1 254 SER n 1 255 PHE n 1 256 ASP n 1 257 SER n 1 258 CYS n 1 259 ILE n 1 260 SER n 1 261 ASN n 1 262 ASN n 1 263 ARG n 1 264 CYS n 1 265 ASN n 1 266 ILE n 1 267 PHE n 1 268 SER n 1 269 ASN n 1 270 PHE n 1 271 ILE n 1 272 PHE n 1 273 ASN n 1 274 GLY n 1 275 ILE n 1 276 ASN n 1 277 SER n 1 278 GLY n 1 279 THR n 1 280 THR n 1 281 CYS n 1 282 SER n 1 283 ASN n 1 284 ASP n 1 285 LEU n 2 1 MET n 2 2 GLY n 2 3 SER n 2 4 LYS n 2 5 CYS n 2 6 SER n 2 7 ASN n 2 8 SER n 2 9 GLY n 2 10 ILE n 2 11 GLU n 2 12 CYS n 2 13 ASP n 2 14 SER n 2 15 SER n 2 16 GLY n 2 17 THR n 2 18 CYS n 2 19 ILE n 2 20 ASN n 2 21 PRO n 2 22 SER n 2 23 ASN n 2 24 TRP n 2 25 CYS n 2 26 ASP n 2 27 GLY n 2 28 VAL n 2 29 SER n 2 30 HIS n 2 31 CYS n 2 32 PRO n 2 33 GLY n 2 34 GLY n 2 35 GLU n 2 36 ASP n 2 37 GLU n 2 38 ASN n 2 39 ARG n 2 40 CYS n 2 41 VAL n 2 42 ARG n 2 43 LEU n 2 44 TYR n 2 45 GLY n 2 46 PRO n 2 47 ASN n 2 48 PHE n 2 49 ILE n 2 50 LEU n 2 51 GLN n 2 52 VAL n 2 53 TYR n 2 54 SER n 2 55 SER n 2 56 GLN n 2 57 ARG n 2 58 LYS n 2 59 SER n 2 60 TRP n 2 61 HIS n 2 62 PRO n 2 63 VAL n 2 64 CYS n 2 65 GLN n 2 66 ASP n 2 67 ASP n 2 68 TRP n 2 69 ASN n 2 70 GLU n 2 71 ASN n 2 72 TYR n 2 73 GLY n 2 74 ARG n 2 75 ALA n 2 76 ALA n 2 77 CYS n 2 78 ARG n 2 79 ASP n 2 80 MET n 2 81 GLY n 2 82 TYR n 2 83 LYS n 2 84 ASN n 2 85 ASN n 2 86 PHE n 2 87 TYR n 2 88 SER n 2 89 SER n 2 90 GLN n 2 91 GLY n 2 92 ILE n 2 93 VAL n 2 94 ASP n 2 95 ASP n 2 96 SER n 2 97 GLY n 2 98 SER n 2 99 THR n 2 100 SER n 2 101 PHE n 2 102 MET n 2 103 LYS n 2 104 LEU n 2 105 ASN n 2 106 THR n 2 107 SER n 2 108 ALA n 2 109 GLY n 2 110 ASN n 2 111 VAL n 2 112 ASP n 2 113 ILE n 2 114 TYR n 2 115 LYS n 2 116 LYS n 2 117 LEU n 2 118 TYR n 2 119 HIS n 2 120 SER n 2 121 ASP n 2 122 ALA n 2 123 CYS n 2 124 SER n 2 125 SER n 2 126 LYS n 2 127 ALA n 2 128 VAL n 2 129 VAL n 2 130 SER n 2 131 LEU n 2 132 ARG n 2 133 CYS n 2 134 ILE n 2 135 ALA n 2 136 CYS n 2 137 GLY n 2 138 VAL n 2 139 ASN n 2 140 LEU n 2 141 ASN n 2 142 SER n 2 143 SER n 2 144 ARG n 2 145 GLN n 2 146 SER n 2 147 ARG n 2 148 ILE n 2 149 VAL n 2 150 GLY n 2 151 GLY n 2 152 GLU n 2 153 SER n 2 154 ALA n 2 155 LEU n 2 156 PRO n 2 157 GLY n 2 158 ALA n 2 159 TRP n 2 160 PRO n 2 161 TRP n 2 162 GLN n 2 163 VAL n 2 164 SER n 2 165 LEU n 2 166 HIS n 2 167 VAL n 2 168 GLN n 2 169 ASN n 2 170 VAL n 2 171 HIS n 2 172 VAL n 2 173 CYS n 2 174 GLY n 2 175 GLY n 2 176 SER n 2 177 ILE n 2 178 ILE n 2 179 THR n 2 180 PRO n 2 181 GLU n 2 182 TRP n 2 183 ILE n 2 184 VAL n 2 185 THR n 2 186 ALA n 2 187 ALA n 2 188 HIS n 2 189 CYS n 2 190 VAL n 2 191 GLU n 2 192 LYS n 2 193 PRO n 2 194 LEU n 2 195 ASN n 2 196 ASN n 2 197 PRO n 2 198 TRP n 2 199 HIS n 2 200 TRP n 2 201 THR n 2 202 ALA n 2 203 PHE n 2 204 ALA n 2 205 GLY n 2 206 ILE n 2 207 LEU n 2 208 ARG n 2 209 GLN n 2 210 SER n 2 211 PHE n 2 212 MET n 2 213 PHE n 2 214 TYR n 2 215 GLY n 2 216 ALA n 2 217 GLY n 2 218 TYR n 2 219 GLN n 2 220 VAL n 2 221 GLU n 2 222 LYS n 2 223 VAL n 2 224 ILE n 2 225 SER n 2 226 HIS n 2 227 PRO n 2 228 ASN n 2 229 TYR n 2 230 ASP n 2 231 SER n 2 232 LYS n 2 233 THR n 2 234 LYS n 2 235 ASN n 2 236 ASN n 2 237 ASP n 2 238 ILE n 2 239 ALA n 2 240 LEU n 2 241 MET n 2 242 LYS n 2 243 LEU n 2 244 GLN n 2 245 LYS n 2 246 PRO n 2 247 LEU n 2 248 THR n 2 249 PHE n 2 250 ASN n 2 251 ASP n 2 252 LEU n 2 253 VAL n 2 254 LYS n 2 255 PRO n 2 256 VAL n 2 257 CYS n 2 258 LEU n 2 259 PRO n 2 260 ASN n 2 261 PRO n 2 262 GLY n 2 263 MET n 2 264 MET n 2 265 LEU n 2 266 GLN n 2 267 PRO n 2 268 GLU n 2 269 GLN n 2 270 LEU n 2 271 CYS n 2 272 TRP n 2 273 ILE n 2 274 SER n 2 275 GLY n 2 276 TRP n 2 277 GLY n 2 278 ALA n 2 279 THR n 2 280 GLU n 2 281 GLU n 2 282 LYS n 2 283 GLY n 2 284 LYS n 2 285 THR n 2 286 SER n 2 287 GLU n 2 288 VAL n 2 289 LEU n 2 290 ASN n 2 291 ALA n 2 292 ALA n 2 293 LYS n 2 294 VAL n 2 295 LEU n 2 296 LEU n 2 297 ILE n 2 298 GLU n 2 299 THR n 2 300 GLN n 2 301 ARG n 2 302 CYS n 2 303 ASN n 2 304 SER n 2 305 ARG n 2 306 TYR n 2 307 VAL n 2 308 TYR n 2 309 ASP n 2 310 ASN n 2 311 LEU n 2 312 ILE n 2 313 THR n 2 314 PRO n 2 315 ALA n 2 316 MET n 2 317 ILE n 2 318 CYS n 2 319 ALA n 2 320 GLY n 2 321 PHE n 2 322 LEU n 2 323 GLN n 2 324 GLY n 2 325 ASN n 2 326 VAL n 2 327 ASP n 2 328 SER n 2 329 CYS n 2 330 GLN n 2 331 GLY n 2 332 ASP n 2 333 ALA n 2 334 GLY n 2 335 GLY n 2 336 PRO n 2 337 LEU n 2 338 VAL n 2 339 THR n 2 340 SER n 2 341 LYS n 2 342 ASN n 2 343 ASN n 2 344 ILE n 2 345 TRP n 2 346 TRP n 2 347 LEU n 2 348 ILE n 2 349 GLY n 2 350 ASP n 2 351 THR n 2 352 SER n 2 353 TRP n 2 354 GLY n 2 355 SER n 2 356 GLY n 2 357 CYS n 2 358 ALA n 2 359 LYS n 2 360 ALA n 2 361 TYR n 2 362 ARG n 2 363 PRO n 2 364 GLY n 2 365 VAL n 2 366 TYR n 2 367 GLY n 2 368 ASN n 2 369 VAL n 2 370 MET n 2 371 VAL n 2 372 PHE n 2 373 THR n 2 374 ASP n 2 375 TRP n 2 376 ILE n 2 377 TYR n 2 378 ARG n 2 379 GLN n 2 380 MET n 2 381 ARG n 2 382 ALA n 2 383 ASP n 2 384 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 285 ? ? 'S, 3' ? ? ? ? ? ? 'Candidatus Accumulibacter adiacens' 2954378 ? ? ? ? ? ? ? ? 'Baculovirus expression vector pFastBac1-HM' 274590 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 384 human ? 'TMPRSS2, PRSS10' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Baculovirus expression vector pFastBac1-HM' 274590 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 323 323 ASN ASN A . n A 1 2 LEU 2 324 324 LEU LEU A . n A 1 3 PRO 3 325 325 PRO PRO A . n A 1 4 ASP 4 326 326 ASP ASP A . n A 1 5 CYS 5 327 327 CYS CYS A . n A 1 6 ASP 6 328 328 ASP ASP A . n A 1 7 ILE 7 329 329 ILE ILE A . n A 1 8 ASP 8 330 330 ASP ASP A . n A 1 9 ASN 9 331 331 ASN ASN A . n A 1 10 TRP 10 332 332 TRP TRP A . n A 1 11 LEU 11 333 333 LEU LEU A . n A 1 12 ASN 12 334 334 ASN ASN A . n A 1 13 ASN 13 335 335 ASN ASN A . n A 1 14 VAL 14 336 336 VAL VAL A . n A 1 15 SER 15 337 337 SER SER A . n A 1 16 VAL 16 338 338 VAL VAL A . n A 1 17 PRO 17 339 339 PRO PRO A . n A 1 18 SER 18 340 340 SER SER A . n A 1 19 PRO 19 341 341 PRO PRO A . n A 1 20 LEU 20 342 342 LEU LEU A . n A 1 21 ASN 21 343 343 ASN ASN A . n A 1 22 TRP 22 344 344 TRP TRP A . n A 1 23 GLU 23 345 345 GLU GLU A . n A 1 24 ARG 24 346 346 ARG ARG A . n A 1 25 ARG 25 347 347 ARG ARG A . n A 1 26 ILE 26 348 348 ILE ILE A . n A 1 27 PHE 27 349 349 PHE PHE A . n A 1 28 SER 28 350 350 SER SER A . n A 1 29 ASN 29 351 351 ASN ASN A . n A 1 30 CYS 30 352 352 CYS CYS A . n A 1 31 ASN 31 353 353 ASN ASN A . n A 1 32 PHE 32 354 354 PHE PHE A . n A 1 33 ASN 33 355 355 ASN ASN A . n A 1 34 LEU 34 356 356 LEU LEU A . n A 1 35 SER 35 357 357 SER SER A . n A 1 36 THR 36 358 358 THR THR A . n A 1 37 LEU 37 359 359 LEU LEU A . n A 1 38 LEU 38 360 360 LEU LEU A . n A 1 39 ARG 39 361 361 ARG ARG A . n A 1 40 LEU 40 362 362 LEU LEU A . n A 1 41 VAL 41 363 363 VAL VAL A . n A 1 42 HIS 42 364 364 HIS HIS A . n A 1 43 VAL 43 365 365 VAL VAL A . n A 1 44 ASP 44 366 366 ASP ASP A . n A 1 45 SER 45 367 367 SER SER A . n A 1 46 PHE 46 368 368 PHE PHE A . n A 1 47 SER 47 369 369 SER SER A . n A 1 48 CYS 48 370 370 CYS CYS A . n A 1 49 ASN 49 371 371 ASN ASN A . n A 1 50 ASN 50 372 372 ASN ASN A . n A 1 51 LEU 51 373 373 LEU LEU A . n A 1 52 ASP 52 374 374 ASP ASP A . n A 1 53 LYS 53 375 375 LYS LYS A . n A 1 54 SER 54 376 376 SER SER A . n A 1 55 LYS 55 377 377 LYS LYS A . n A 1 56 ILE 56 378 378 ILE ILE A . n A 1 57 PHE 57 379 379 PHE PHE A . n A 1 58 GLY 58 380 380 GLY GLY A . n A 1 59 SER 59 381 381 SER SER A . n A 1 60 CYS 60 382 382 CYS CYS A . n A 1 61 PHE 61 383 383 PHE PHE A . n A 1 62 ASN 62 384 384 ASN ASN A . n A 1 63 SER 63 385 385 SER SER A . n A 1 64 ILE 64 386 386 ILE ILE A . n A 1 65 THR 65 387 387 THR THR A . n A 1 66 VAL 66 388 388 VAL VAL A . n A 1 67 ASP 67 389 389 ASP ASP A . n A 1 68 LYS 68 390 390 LYS LYS A . n A 1 69 PHE 69 391 391 PHE PHE A . n A 1 70 ALA 70 392 392 ALA ALA A . n A 1 71 ILE 71 393 393 ILE ILE A . n A 1 72 PRO 72 394 394 PRO PRO A . n A 1 73 ASN 73 395 395 ASN ASN A . n A 1 74 ARG 74 396 396 ARG ARG A . n A 1 75 ARG 75 397 397 ARG ARG A . n A 1 76 ARG 76 398 398 ARG ARG A . n A 1 77 ASP 77 399 399 ASP ASP A . n A 1 78 ASP 78 400 400 ASP ASP A . n A 1 79 LEU 79 401 401 LEU LEU A . n A 1 80 GLN 80 402 402 GLN GLN A . n A 1 81 LEU 81 403 403 LEU LEU A . n A 1 82 GLY 82 404 404 GLY GLY A . n A 1 83 SER 83 405 405 SER SER A . n A 1 84 SER 84 406 406 SER SER A . n A 1 85 GLY 85 407 407 GLY GLY A . n A 1 86 PHE 86 408 408 PHE PHE A . n A 1 87 LEU 87 409 409 LEU LEU A . n A 1 88 GLN 88 410 410 GLN GLN A . n A 1 89 SER 89 411 411 SER SER A . n A 1 90 SER 90 412 412 SER SER A . n A 1 91 ASN 91 413 413 ASN ASN A . n A 1 92 TYR 92 414 414 TYR TYR A . n A 1 93 LYS 93 415 415 LYS LYS A . n A 1 94 ILE 94 416 416 ILE ILE A . n A 1 95 ASP 95 417 417 ASP ASP A . n A 1 96 ILE 96 418 418 ILE ILE A . n A 1 97 SER 97 419 419 SER SER A . n A 1 98 SER 98 420 420 SER SER A . n A 1 99 SER 99 421 421 SER SER A . n A 1 100 SER 100 422 422 SER SER A . n A 1 101 CYS 101 423 423 CYS CYS A . n A 1 102 GLN 102 424 424 GLN GLN A . n A 1 103 LEU 103 425 425 LEU LEU A . n A 1 104 TYR 104 426 426 TYR TYR A . n A 1 105 TYR 105 427 427 TYR TYR A . n A 1 106 SER 106 428 428 SER SER A . n A 1 107 LEU 107 429 429 LEU LEU A . n A 1 108 PRO 108 430 430 PRO PRO A . n A 1 109 LEU 109 431 431 LEU LEU A . n A 1 110 VAL 110 432 432 VAL VAL A . n A 1 111 ASN 111 433 433 ASN ASN A . n A 1 112 VAL 112 434 434 VAL VAL A . n A 1 113 THR 113 435 435 THR THR A . n A 1 114 ILE 114 436 436 ILE ILE A . n A 1 115 ASN 115 437 437 ASN ASN A . n A 1 116 ASN 116 438 438 ASN ASN A . n A 1 117 PHE 117 439 439 PHE PHE A . n A 1 118 ASN 118 440 440 ASN ASN A . n A 1 119 PRO 119 441 441 PRO PRO A . n A 1 120 SER 120 442 442 SER SER A . n A 1 121 SER 121 443 443 SER SER A . n A 1 122 TRP 122 444 444 TRP TRP A . n A 1 123 ASN 123 445 445 ASN ASN A . n A 1 124 ARG 124 446 446 ARG ARG A . n A 1 125 ARG 125 447 447 ARG ARG A . n A 1 126 TYR 126 448 448 TYR TYR A . n A 1 127 GLY 127 449 449 GLY GLY A . n A 1 128 PHE 128 450 450 PHE PHE A . n A 1 129 GLY 129 451 451 GLY GLY A . n A 1 130 SER 130 452 452 SER SER A . n A 1 131 PHE 131 453 453 PHE PHE A . n A 1 132 ASN 132 454 454 ASN ASN A . n A 1 133 LEU 133 455 455 LEU LEU A . n A 1 134 SER 134 456 456 SER SER A . n A 1 135 SER 135 457 457 SER SER A . n A 1 136 TYR 136 458 458 TYR TYR A . n A 1 137 ASP 137 459 459 ASP ASP A . n A 1 138 VAL 138 460 460 VAL VAL A . n A 1 139 VAL 139 461 461 VAL VAL A . n A 1 140 TYR 140 462 462 TYR TYR A . n A 1 141 SER 141 463 463 SER SER A . n A 1 142 ASP 142 464 464 ASP ASP A . n A 1 143 HIS 143 465 465 HIS HIS A . n A 1 144 CYS 144 466 466 CYS CYS A . n A 1 145 PHE 145 467 467 PHE PHE A . n A 1 146 SER 146 468 468 SER SER A . n A 1 147 VAL 147 469 469 VAL VAL A . n A 1 148 ASN 148 470 470 ASN ASN A . n A 1 149 SER 149 471 471 SER SER A . n A 1 150 ASP 150 472 472 ASP ASP A . n A 1 151 PHE 151 473 473 PHE PHE A . n A 1 152 CYS 152 474 474 CYS CYS A . n A 1 153 PRO 153 475 475 PRO PRO A . n A 1 154 CYS 154 476 476 CYS CYS A . n A 1 155 ALA 155 477 477 ALA ALA A . n A 1 156 ASP 156 478 478 ASP ASP A . n A 1 157 PRO 157 479 479 PRO PRO A . n A 1 158 SER 158 480 480 SER SER A . n A 1 159 VAL 159 481 481 VAL VAL A . n A 1 160 VAL 160 482 482 VAL VAL A . n A 1 161 ASN 161 483 483 ASN ASN A . n A 1 162 SER 162 484 484 SER SER A . n A 1 163 CYS 163 485 485 CYS CYS A . n A 1 164 ALA 164 486 486 ALA ALA A . n A 1 165 LYS 165 487 487 LYS LYS A . n A 1 166 SER 166 488 488 SER SER A . n A 1 167 LYS 167 489 489 LYS LYS A . n A 1 168 PRO 168 490 490 PRO PRO A . n A 1 169 PRO 169 491 491 PRO PRO A . n A 1 170 SER 170 492 492 SER SER A . n A 1 171 ALA 171 493 493 ALA ALA A . n A 1 172 ILE 172 494 494 ILE ILE A . n A 1 173 CYS 173 495 495 CYS CYS A . n A 1 174 PRO 174 496 496 PRO PRO A . n A 1 175 ALA 175 497 497 ALA ALA A . n A 1 176 GLY 176 498 498 GLY GLY A . n A 1 177 THR 177 499 499 THR THR A . n A 1 178 LYS 178 500 500 LYS LYS A . n A 1 179 TYR 179 501 501 TYR TYR A . n A 1 180 ARG 180 502 502 ARG ARG A . n A 1 181 HIS 181 503 503 HIS HIS A . n A 1 182 CYS 182 504 504 CYS CYS A . n A 1 183 ASP 183 505 505 ASP ASP A . n A 1 184 LEU 184 506 506 LEU LEU A . n A 1 185 ASP 185 507 507 ASP ASP A . n A 1 186 THR 186 508 508 THR THR A . n A 1 187 THR 187 509 509 THR THR A . n A 1 188 LEU 188 510 510 LEU LEU A . n A 1 189 TYR 189 511 511 TYR TYR A . n A 1 190 VAL 190 512 512 VAL VAL A . n A 1 191 LYS 191 513 513 LYS LYS A . n A 1 192 ASN 192 514 514 ASN ASN A . n A 1 193 TRP 193 515 515 TRP TRP A . n A 1 194 CYS 194 516 516 CYS CYS A . n A 1 195 ARG 195 517 517 ARG ARG A . n A 1 196 CYS 196 518 518 CYS CYS A . n A 1 197 SER 197 519 519 SER SER A . n A 1 198 CYS 198 520 520 CYS CYS A . n A 1 199 LEU 199 521 521 LEU LEU A . n A 1 200 PRO 200 522 522 PRO PRO A . n A 1 201 ASP 201 523 523 ASP ASP A . n A 1 202 PRO 202 524 524 PRO PRO A . n A 1 203 ILE 203 525 525 ILE ILE A . n A 1 204 SER 204 526 526 SER SER A . n A 1 205 THR 205 527 527 THR THR A . n A 1 206 TYR 206 528 528 TYR TYR A . n A 1 207 SER 207 529 529 SER SER A . n A 1 208 PRO 208 530 530 PRO PRO A . n A 1 209 ASN 209 531 531 ASN ASN A . n A 1 210 THR 210 532 532 THR THR A . n A 1 211 CYS 211 533 533 CYS CYS A . n A 1 212 PRO 212 534 534 PRO PRO A . n A 1 213 GLN 213 535 535 GLN GLN A . n A 1 214 LYS 214 536 536 LYS LYS A . n A 1 215 LYS 215 537 537 LYS LYS A . n A 1 216 VAL 216 538 538 VAL VAL A . n A 1 217 VAL 217 539 539 VAL VAL A . n A 1 218 VAL 218 540 540 VAL VAL A . n A 1 219 GLY 219 541 541 GLY GLY A . n A 1 220 ILE 220 542 542 ILE ILE A . n A 1 221 GLY 221 543 543 GLY GLY A . n A 1 222 GLU 222 544 544 GLU GLU A . n A 1 223 HIS 223 545 545 HIS HIS A . n A 1 224 CYS 224 546 546 CYS CYS A . n A 1 225 PRO 225 547 547 PRO PRO A . n A 1 226 GLY 226 548 548 GLY GLY A . n A 1 227 LEU 227 549 549 LEU LEU A . n A 1 228 GLY 228 550 550 GLY GLY A . n A 1 229 ILE 229 551 551 ILE ILE A . n A 1 230 ASN 230 552 552 ASN ASN A . n A 1 231 GLU 231 553 553 GLU GLU A . n A 1 232 GLU 232 554 554 GLU GLU A . n A 1 233 LYS 233 555 555 LYS LYS A . n A 1 234 CYS 234 556 556 CYS CYS A . n A 1 235 GLY 235 557 557 GLY GLY A . n A 1 236 THR 236 558 558 THR THR A . n A 1 237 GLN 237 559 559 GLN GLN A . n A 1 238 LEU 238 560 560 LEU LEU A . n A 1 239 ASN 239 561 561 ASN ASN A . n A 1 240 HIS 240 562 562 HIS HIS A . n A 1 241 SER 241 563 563 SER SER A . n A 1 242 SER 242 564 564 SER SER A . n A 1 243 CYS 243 565 565 CYS CYS A . n A 1 244 PHE 244 566 566 PHE PHE A . n A 1 245 CYS 245 567 567 CYS CYS A . n A 1 246 SER 246 568 568 SER SER A . n A 1 247 PRO 247 569 569 PRO PRO A . n A 1 248 ASP 248 570 570 ASP ASP A . n A 1 249 ALA 249 571 571 ALA ALA A . n A 1 250 PHE 250 572 572 PHE PHE A . n A 1 251 LEU 251 573 573 LEU LEU A . n A 1 252 GLY 252 574 574 GLY GLY A . n A 1 253 TRP 253 575 575 TRP TRP A . n A 1 254 SER 254 576 576 SER SER A . n A 1 255 PHE 255 577 577 PHE PHE A . n A 1 256 ASP 256 578 578 ASP ASP A . n A 1 257 SER 257 579 579 SER SER A . n A 1 258 CYS 258 580 580 CYS CYS A . n A 1 259 ILE 259 581 581 ILE ILE A . n A 1 260 SER 260 582 582 SER SER A . n A 1 261 ASN 261 583 583 ASN ASN A . n A 1 262 ASN 262 584 584 ASN ASN A . n A 1 263 ARG 263 585 585 ARG ARG A . n A 1 264 CYS 264 586 586 CYS CYS A . n A 1 265 ASN 265 587 587 ASN ASN A . n A 1 266 ILE 266 588 588 ILE ILE A . n A 1 267 PHE 267 589 589 PHE PHE A . n A 1 268 SER 268 590 590 SER SER A . n A 1 269 ASN 269 591 591 ASN ASN A . n A 1 270 PHE 270 592 592 PHE PHE A . n A 1 271 ILE 271 593 593 ILE ILE A . n A 1 272 PHE 272 594 594 PHE PHE A . n A 1 273 ASN 273 595 595 ASN ASN A . n A 1 274 GLY 274 596 596 GLY GLY A . n A 1 275 ILE 275 597 597 ILE ILE A . n A 1 276 ASN 276 598 598 ASN ASN A . n A 1 277 SER 277 599 599 SER SER A . n A 1 278 GLY 278 600 600 GLY GLY A . n A 1 279 THR 279 601 601 THR THR A . n A 1 280 THR 280 602 602 THR THR A . n A 1 281 CYS 281 603 603 CYS CYS A . n A 1 282 SER 282 604 604 SER SER A . n A 1 283 ASN 283 605 605 ASN ASN A . n A 1 284 ASP 284 606 606 ASP ASP A . n A 1 285 LEU 285 607 607 LEU LEU A . n B 2 1 MET 1 109 ? ? ? B . n B 2 2 GLY 2 110 ? ? ? B . n B 2 3 SER 3 111 ? ? ? B . n B 2 4 LYS 4 112 ? ? ? B . n B 2 5 CYS 5 113 ? ? ? B . n B 2 6 SER 6 114 ? ? ? B . n B 2 7 ASN 7 115 ? ? ? B . n B 2 8 SER 8 116 ? ? ? B . n B 2 9 GLY 9 117 ? ? ? B . n B 2 10 ILE 10 118 ? ? ? B . n B 2 11 GLU 11 119 ? ? ? B . n B 2 12 CYS 12 120 ? ? ? B . n B 2 13 ASP 13 121 ? ? ? B . n B 2 14 SER 14 122 ? ? ? B . n B 2 15 SER 15 123 ? ? ? B . n B 2 16 GLY 16 124 ? ? ? B . n B 2 17 THR 17 125 ? ? ? B . n B 2 18 CYS 18 126 ? ? ? B . n B 2 19 ILE 19 127 ? ? ? B . n B 2 20 ASN 20 128 ? ? ? B . n B 2 21 PRO 21 129 129 PRO PRO B . n B 2 22 SER 22 130 130 SER SER B . n B 2 23 ASN 23 131 131 ASN ASN B . n B 2 24 TRP 24 132 132 TRP TRP B . n B 2 25 CYS 25 133 133 CYS CYS B . n B 2 26 ASP 26 134 134 ASP ASP B . n B 2 27 GLY 27 135 135 GLY GLY B . n B 2 28 VAL 28 136 136 VAL VAL B . n B 2 29 SER 29 137 137 SER SER B . n B 2 30 HIS 30 138 138 HIS HIS B . n B 2 31 CYS 31 139 139 CYS CYS B . n B 2 32 PRO 32 140 140 PRO PRO B . n B 2 33 GLY 33 141 141 GLY GLY B . n B 2 34 GLY 34 142 142 GLY GLY B . n B 2 35 GLU 35 143 143 GLU GLU B . n B 2 36 ASP 36 144 144 ASP ASP B . n B 2 37 GLU 37 145 145 GLU GLU B . n B 2 38 ASN 38 146 146 ASN ASN B . n B 2 39 ARG 39 147 147 ARG ARG B . n B 2 40 CYS 40 148 148 CYS CYS B . n B 2 41 VAL 41 149 149 VAL VAL B . n B 2 42 ARG 42 150 150 ARG ARG B . n B 2 43 LEU 43 151 151 LEU LEU B . n B 2 44 TYR 44 152 152 TYR TYR B . n B 2 45 GLY 45 153 153 GLY GLY B . n B 2 46 PRO 46 154 154 PRO PRO B . n B 2 47 ASN 47 155 155 ASN ASN B . n B 2 48 PHE 48 156 156 PHE PHE B . n B 2 49 ILE 49 157 157 ILE ILE B . n B 2 50 LEU 50 158 158 LEU LEU B . n B 2 51 GLN 51 159 159 GLN GLN B . n B 2 52 VAL 52 160 160 VAL VAL B . n B 2 53 TYR 53 161 161 TYR TYR B . n B 2 54 SER 54 162 162 SER SER B . n B 2 55 SER 55 163 163 SER SER B . n B 2 56 GLN 56 164 164 GLN GLN B . n B 2 57 ARG 57 165 165 ARG ARG B . n B 2 58 LYS 58 166 166 LYS LYS B . n B 2 59 SER 59 167 167 SER SER B . n B 2 60 TRP 60 168 168 TRP TRP B . n B 2 61 HIS 61 169 169 HIS HIS B . n B 2 62 PRO 62 170 170 PRO PRO B . n B 2 63 VAL 63 171 171 VAL VAL B . n B 2 64 CYS 64 172 172 CYS CYS B . n B 2 65 GLN 65 173 173 GLN GLN B . n B 2 66 ASP 66 174 174 ASP ASP B . n B 2 67 ASP 67 175 175 ASP ASP B . n B 2 68 TRP 68 176 176 TRP TRP B . n B 2 69 ASN 69 177 177 ASN ASN B . n B 2 70 GLU 70 178 178 GLU GLU B . n B 2 71 ASN 71 179 179 ASN ASN B . n B 2 72 TYR 72 180 180 TYR TYR B . n B 2 73 GLY 73 181 181 GLY GLY B . n B 2 74 ARG 74 182 182 ARG ARG B . n B 2 75 ALA 75 183 183 ALA ALA B . n B 2 76 ALA 76 184 184 ALA ALA B . n B 2 77 CYS 77 185 185 CYS CYS B . n B 2 78 ARG 78 186 186 ARG ARG B . n B 2 79 ASP 79 187 187 ASP ASP B . n B 2 80 MET 80 188 188 MET MET B . n B 2 81 GLY 81 189 189 GLY GLY B . n B 2 82 TYR 82 190 190 TYR TYR B . n B 2 83 LYS 83 191 191 LYS LYS B . n B 2 84 ASN 84 192 192 ASN ASN B . n B 2 85 ASN 85 193 193 ASN ASN B . n B 2 86 PHE 86 194 194 PHE PHE B . n B 2 87 TYR 87 195 195 TYR TYR B . n B 2 88 SER 88 196 196 SER SER B . n B 2 89 SER 89 197 197 SER SER B . n B 2 90 GLN 90 198 198 GLN GLN B . n B 2 91 GLY 91 199 199 GLY GLY B . n B 2 92 ILE 92 200 200 ILE ILE B . n B 2 93 VAL 93 201 201 VAL VAL B . n B 2 94 ASP 94 202 202 ASP ASP B . n B 2 95 ASP 95 203 203 ASP ASP B . n B 2 96 SER 96 204 204 SER SER B . n B 2 97 GLY 97 205 205 GLY GLY B . n B 2 98 SER 98 206 206 SER SER B . n B 2 99 THR 99 207 207 THR THR B . n B 2 100 SER 100 208 208 SER SER B . n B 2 101 PHE 101 209 209 PHE PHE B . n B 2 102 MET 102 210 210 MET MET B . n B 2 103 LYS 103 211 211 LYS LYS B . n B 2 104 LEU 104 212 212 LEU LEU B . n B 2 105 ASN 105 213 213 ASN ASN B . n B 2 106 THR 106 214 214 THR THR B . n B 2 107 SER 107 215 215 SER SER B . n B 2 108 ALA 108 216 216 ALA ALA B . n B 2 109 GLY 109 217 217 GLY GLY B . n B 2 110 ASN 110 218 218 ASN ASN B . n B 2 111 VAL 111 219 219 VAL VAL B . n B 2 112 ASP 112 220 220 ASP ASP B . n B 2 113 ILE 113 221 221 ILE ILE B . n B 2 114 TYR 114 222 222 TYR TYR B . n B 2 115 LYS 115 223 223 LYS LYS B . n B 2 116 LYS 116 224 224 LYS LYS B . n B 2 117 LEU 117 225 225 LEU LEU B . n B 2 118 TYR 118 226 226 TYR TYR B . n B 2 119 HIS 119 227 227 HIS HIS B . n B 2 120 SER 120 228 228 SER SER B . n B 2 121 ASP 121 229 229 ASP ASP B . n B 2 122 ALA 122 230 230 ALA ALA B . n B 2 123 CYS 123 231 231 CYS CYS B . n B 2 124 SER 124 232 232 SER SER B . n B 2 125 SER 125 233 233 SER SER B . n B 2 126 LYS 126 234 234 LYS LYS B . n B 2 127 ALA 127 235 235 ALA ALA B . n B 2 128 VAL 128 236 236 VAL VAL B . n B 2 129 VAL 129 237 237 VAL VAL B . n B 2 130 SER 130 238 238 SER SER B . n B 2 131 LEU 131 239 239 LEU LEU B . n B 2 132 ARG 132 240 240 ARG ARG B . n B 2 133 CYS 133 241 241 CYS CYS B . n B 2 134 ILE 134 242 242 ILE ILE B . n B 2 135 ALA 135 243 243 ALA ALA B . n B 2 136 CYS 136 244 244 CYS CYS B . n B 2 137 GLY 137 245 245 GLY GLY B . n B 2 138 VAL 138 246 246 VAL VAL B . n B 2 139 ASN 139 247 247 ASN ASN B . n B 2 140 LEU 140 248 248 LEU LEU B . n B 2 141 ASN 141 249 249 ASN ASN B . n B 2 142 SER 142 250 250 SER SER B . n B 2 143 SER 143 251 251 SER SER B . n B 2 144 ARG 144 252 252 ARG ARG B . n B 2 145 GLN 145 253 253 GLN GLN B . n B 2 146 SER 146 254 254 SER SER B . n B 2 147 ARG 147 255 255 ARG ARG B . n B 2 148 ILE 148 256 256 ILE ILE B . n B 2 149 VAL 149 257 257 VAL VAL B . n B 2 150 GLY 150 258 258 GLY GLY B . n B 2 151 GLY 151 259 259 GLY GLY B . n B 2 152 GLU 152 260 260 GLU GLU B . n B 2 153 SER 153 261 261 SER SER B . n B 2 154 ALA 154 262 262 ALA ALA B . n B 2 155 LEU 155 263 263 LEU LEU B . n B 2 156 PRO 156 264 264 PRO PRO B . n B 2 157 GLY 157 265 265 GLY GLY B . n B 2 158 ALA 158 266 266 ALA ALA B . n B 2 159 TRP 159 267 267 TRP TRP B . n B 2 160 PRO 160 268 268 PRO PRO B . n B 2 161 TRP 161 269 269 TRP TRP B . n B 2 162 GLN 162 270 270 GLN GLN B . n B 2 163 VAL 163 271 271 VAL VAL B . n B 2 164 SER 164 272 272 SER SER B . n B 2 165 LEU 165 273 273 LEU LEU B . n B 2 166 HIS 166 274 274 HIS HIS B . n B 2 167 VAL 167 275 275 VAL VAL B . n B 2 168 GLN 168 276 276 GLN GLN B . n B 2 169 ASN 169 277 277 ASN ASN B . n B 2 170 VAL 170 278 278 VAL VAL B . n B 2 171 HIS 171 279 279 HIS HIS B . n B 2 172 VAL 172 280 280 VAL VAL B . n B 2 173 CYS 173 281 281 CYS CYS B . n B 2 174 GLY 174 282 282 GLY GLY B . n B 2 175 GLY 175 283 283 GLY GLY B . n B 2 176 SER 176 284 284 SER SER B . n B 2 177 ILE 177 285 285 ILE ILE B . n B 2 178 ILE 178 286 286 ILE ILE B . n B 2 179 THR 179 287 287 THR THR B . n B 2 180 PRO 180 288 288 PRO PRO B . n B 2 181 GLU 181 289 289 GLU GLU B . n B 2 182 TRP 182 290 290 TRP TRP B . n B 2 183 ILE 183 291 291 ILE ILE B . n B 2 184 VAL 184 292 292 VAL VAL B . n B 2 185 THR 185 293 293 THR THR B . n B 2 186 ALA 186 294 294 ALA ALA B . n B 2 187 ALA 187 295 295 ALA ALA B . n B 2 188 HIS 188 296 296 HIS HIS B . n B 2 189 CYS 189 297 297 CYS CYS B . n B 2 190 VAL 190 298 298 VAL VAL B . n B 2 191 GLU 191 299 299 GLU GLU B . n B 2 192 LYS 192 300 300 LYS LYS B . n B 2 193 PRO 193 301 301 PRO PRO B . n B 2 194 LEU 194 302 302 LEU LEU B . n B 2 195 ASN 195 303 303 ASN ASN B . n B 2 196 ASN 196 304 304 ASN ASN B . n B 2 197 PRO 197 305 305 PRO PRO B . n B 2 198 TRP 198 306 306 TRP TRP B . n B 2 199 HIS 199 307 307 HIS HIS B . n B 2 200 TRP 200 308 308 TRP TRP B . n B 2 201 THR 201 309 309 THR THR B . n B 2 202 ALA 202 310 310 ALA ALA B . n B 2 203 PHE 203 311 311 PHE PHE B . n B 2 204 ALA 204 312 312 ALA ALA B . n B 2 205 GLY 205 313 313 GLY GLY B . n B 2 206 ILE 206 314 314 ILE ILE B . n B 2 207 LEU 207 315 315 LEU LEU B . n B 2 208 ARG 208 316 316 ARG ARG B . n B 2 209 GLN 209 317 317 GLN GLN B . n B 2 210 SER 210 318 318 SER SER B . n B 2 211 PHE 211 319 319 PHE PHE B . n B 2 212 MET 212 320 320 MET MET B . n B 2 213 PHE 213 321 321 PHE PHE B . n B 2 214 TYR 214 322 322 TYR TYR B . n B 2 215 GLY 215 323 323 GLY GLY B . n B 2 216 ALA 216 324 324 ALA ALA B . n B 2 217 GLY 217 325 325 GLY GLY B . n B 2 218 TYR 218 326 326 TYR TYR B . n B 2 219 GLN 219 327 327 GLN GLN B . n B 2 220 VAL 220 328 328 VAL VAL B . n B 2 221 GLU 221 329 329 GLU GLU B . n B 2 222 LYS 222 330 330 LYS LYS B . n B 2 223 VAL 223 331 331 VAL VAL B . n B 2 224 ILE 224 332 332 ILE ILE B . n B 2 225 SER 225 333 333 SER SER B . n B 2 226 HIS 226 334 334 HIS HIS B . n B 2 227 PRO 227 335 335 PRO PRO B . n B 2 228 ASN 228 336 336 ASN ASN B . n B 2 229 TYR 229 337 337 TYR TYR B . n B 2 230 ASP 230 338 338 ASP ASP B . n B 2 231 SER 231 339 339 SER SER B . n B 2 232 LYS 232 340 340 LYS LYS B . n B 2 233 THR 233 341 341 THR THR B . n B 2 234 LYS 234 342 342 LYS LYS B . n B 2 235 ASN 235 343 343 ASN ASN B . n B 2 236 ASN 236 344 344 ASN ASN B . n B 2 237 ASP 237 345 345 ASP ASP B . n B 2 238 ILE 238 346 346 ILE ILE B . n B 2 239 ALA 239 347 347 ALA ALA B . n B 2 240 LEU 240 348 348 LEU LEU B . n B 2 241 MET 241 349 349 MET MET B . n B 2 242 LYS 242 350 350 LYS LYS B . n B 2 243 LEU 243 351 351 LEU LEU B . n B 2 244 GLN 244 352 352 GLN GLN B . n B 2 245 LYS 245 353 353 LYS LYS B . n B 2 246 PRO 246 354 354 PRO PRO B . n B 2 247 LEU 247 355 355 LEU LEU B . n B 2 248 THR 248 356 356 THR THR B . n B 2 249 PHE 249 357 357 PHE PHE B . n B 2 250 ASN 250 358 358 ASN ASN B . n B 2 251 ASP 251 359 359 ASP ASP B . n B 2 252 LEU 252 360 360 LEU LEU B . n B 2 253 VAL 253 361 361 VAL VAL B . n B 2 254 LYS 254 362 362 LYS LYS B . n B 2 255 PRO 255 363 363 PRO PRO B . n B 2 256 VAL 256 364 364 VAL VAL B . n B 2 257 CYS 257 365 365 CYS CYS B . n B 2 258 LEU 258 366 366 LEU LEU B . n B 2 259 PRO 259 367 367 PRO PRO B . n B 2 260 ASN 260 368 368 ASN ASN B . n B 2 261 PRO 261 369 369 PRO PRO B . n B 2 262 GLY 262 370 370 GLY GLY B . n B 2 263 MET 263 371 371 MET MET B . n B 2 264 MET 264 372 372 MET MET B . n B 2 265 LEU 265 373 373 LEU LEU B . n B 2 266 GLN 266 374 374 GLN GLN B . n B 2 267 PRO 267 375 375 PRO PRO B . n B 2 268 GLU 268 376 376 GLU GLU B . n B 2 269 GLN 269 377 377 GLN GLN B . n B 2 270 LEU 270 378 378 LEU LEU B . n B 2 271 CYS 271 379 379 CYS CYS B . n B 2 272 TRP 272 380 380 TRP TRP B . n B 2 273 ILE 273 381 381 ILE ILE B . n B 2 274 SER 274 382 382 SER SER B . n B 2 275 GLY 275 383 383 GLY GLY B . n B 2 276 TRP 276 384 384 TRP TRP B . n B 2 277 GLY 277 385 385 GLY GLY B . n B 2 278 ALA 278 386 386 ALA ALA B . n B 2 279 THR 279 387 387 THR THR B . n B 2 280 GLU 280 388 388 GLU GLU B . n B 2 281 GLU 281 389 389 GLU GLU B . n B 2 282 LYS 282 390 390 LYS LYS B . n B 2 283 GLY 283 391 391 GLY GLY B . n B 2 284 LYS 284 392 392 LYS LYS B . n B 2 285 THR 285 393 393 THR THR B . n B 2 286 SER 286 394 394 SER SER B . n B 2 287 GLU 287 395 395 GLU GLU B . n B 2 288 VAL 288 396 396 VAL VAL B . n B 2 289 LEU 289 397 397 LEU LEU B . n B 2 290 ASN 290 398 398 ASN ASN B . n B 2 291 ALA 291 399 399 ALA ALA B . n B 2 292 ALA 292 400 400 ALA ALA B . n B 2 293 LYS 293 401 401 LYS LYS B . n B 2 294 VAL 294 402 402 VAL VAL B . n B 2 295 LEU 295 403 403 LEU LEU B . n B 2 296 LEU 296 404 404 LEU LEU B . n B 2 297 ILE 297 405 405 ILE ILE B . n B 2 298 GLU 298 406 406 GLU GLU B . n B 2 299 THR 299 407 407 THR THR B . n B 2 300 GLN 300 408 408 GLN GLN B . n B 2 301 ARG 301 409 409 ARG ARG B . n B 2 302 CYS 302 410 410 CYS CYS B . n B 2 303 ASN 303 411 411 ASN ASN B . n B 2 304 SER 304 412 412 SER SER B . n B 2 305 ARG 305 413 413 ARG ARG B . n B 2 306 TYR 306 414 414 TYR TYR B . n B 2 307 VAL 307 415 415 VAL VAL B . n B 2 308 TYR 308 416 416 TYR TYR B . n B 2 309 ASP 309 417 417 ASP ASP B . n B 2 310 ASN 310 418 418 ASN ASN B . n B 2 311 LEU 311 419 419 LEU LEU B . n B 2 312 ILE 312 420 420 ILE ILE B . n B 2 313 THR 313 421 421 THR THR B . n B 2 314 PRO 314 422 422 PRO PRO B . n B 2 315 ALA 315 423 423 ALA ALA B . n B 2 316 MET 316 424 424 MET MET B . n B 2 317 ILE 317 425 425 ILE ILE B . n B 2 318 CYS 318 426 426 CYS CYS B . n B 2 319 ALA 319 427 427 ALA ALA B . n B 2 320 GLY 320 428 428 GLY GLY B . n B 2 321 PHE 321 429 429 PHE PHE B . n B 2 322 LEU 322 430 430 LEU LEU B . n B 2 323 GLN 323 431 431 GLN GLN B . n B 2 324 GLY 324 432 432 GLY GLY B . n B 2 325 ASN 325 433 433 ASN ASN B . n B 2 326 VAL 326 434 434 VAL VAL B . n B 2 327 ASP 327 435 435 ASP ASP B . n B 2 328 SER 328 436 436 SER SER B . n B 2 329 CYS 329 437 437 CYS CYS B . n B 2 330 GLN 330 438 438 GLN GLN B . n B 2 331 GLY 331 439 439 GLY GLY B . n B 2 332 ASP 332 440 440 ASP ASP B . n B 2 333 ALA 333 441 441 ALA ALA B . n B 2 334 GLY 334 442 442 GLY GLY B . n B 2 335 GLY 335 443 443 GLY GLY B . n B 2 336 PRO 336 444 444 PRO PRO B . n B 2 337 LEU 337 445 445 LEU LEU B . n B 2 338 VAL 338 446 446 VAL VAL B . n B 2 339 THR 339 447 447 THR THR B . n B 2 340 SER 340 448 448 SER SER B . n B 2 341 LYS 341 449 449 LYS LYS B . n B 2 342 ASN 342 450 450 ASN ASN B . n B 2 343 ASN 343 451 451 ASN ASN B . n B 2 344 ILE 344 452 452 ILE ILE B . n B 2 345 TRP 345 453 453 TRP TRP B . n B 2 346 TRP 346 454 454 TRP TRP B . n B 2 347 LEU 347 455 455 LEU LEU B . n B 2 348 ILE 348 456 456 ILE ILE B . n B 2 349 GLY 349 457 457 GLY GLY B . n B 2 350 ASP 350 458 458 ASP ASP B . n B 2 351 THR 351 459 459 THR THR B . n B 2 352 SER 352 460 460 SER SER B . n B 2 353 TRP 353 461 461 TRP TRP B . n B 2 354 GLY 354 462 462 GLY GLY B . n B 2 355 SER 355 463 463 SER SER B . n B 2 356 GLY 356 464 464 GLY GLY B . n B 2 357 CYS 357 465 465 CYS CYS B . n B 2 358 ALA 358 466 466 ALA ALA B . n B 2 359 LYS 359 467 467 LYS LYS B . n B 2 360 ALA 360 468 468 ALA ALA B . n B 2 361 TYR 361 469 469 TYR TYR B . n B 2 362 ARG 362 470 470 ARG ARG B . n B 2 363 PRO 363 471 471 PRO PRO B . n B 2 364 GLY 364 472 472 GLY GLY B . n B 2 365 VAL 365 473 473 VAL VAL B . n B 2 366 TYR 366 474 474 TYR TYR B . n B 2 367 GLY 367 475 475 GLY GLY B . n B 2 368 ASN 368 476 476 ASN ASN B . n B 2 369 VAL 369 477 477 VAL VAL B . n B 2 370 MET 370 478 478 MET MET B . n B 2 371 VAL 371 479 479 VAL VAL B . n B 2 372 PHE 372 480 480 PHE PHE B . n B 2 373 THR 373 481 481 THR THR B . n B 2 374 ASP 374 482 482 ASP ASP B . n B 2 375 TRP 375 483 483 TRP TRP B . n B 2 376 ILE 376 484 484 ILE ILE B . n B 2 377 TYR 377 485 485 TYR TYR B . n B 2 378 ARG 378 486 486 ARG ARG B . n B 2 379 GLN 379 487 487 GLN GLN B . n B 2 380 MET 380 488 488 MET MET B . n B 2 381 ARG 381 489 489 ARG ARG B . n B 2 382 ALA 382 490 490 ALA ALA B . n B 2 383 ASP 383 491 491 ASP ASP B . n B 2 384 GLY 384 492 492 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 701 1027 NAG NAG A . D 3 NAG 1 702 1028 NAG NAG A . E 3 NAG 1 703 1029 NAG NAG A . F 3 NAG 1 704 1030 NAG NAG A . G 3 NAG 1 501 1 NAG NAG B . H 3 NAG 1 502 2 NAG NAG B . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8YQQ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YQQ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8YQQ _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 5271 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.837 ? 7172 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 5.141 ? 698 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.053 ? 776 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.009 ? 929 ? f_plane_restr ? ? # _struct.entry_id 8YQQ _struct.title 'Structure of HKU1B RBD with TMPRSS2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YQQ _struct_keywords.text 'HKU1B, RBD, TMPRSS2, VIRAL PROTEIN/HYDROLASE, VIRAL PROTEIN-HYDROLASE complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_CVHN5 Q0ZME7 ? 1 ;NLPDCDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQ LGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVV NSCAKSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNH SSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDL ; 323 2 UNP TMPS2_HUMAN O15393 ? 2 ;MGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDM GYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWP WQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIAL MKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAG FLQGNVDSCQGDSGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG ; 109 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8YQQ A 1 ? 285 ? Q0ZME7 323 ? 607 ? 323 607 2 2 8YQQ B 1 ? 384 ? O15393 109 ? 492 ? 109 492 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 8YQQ _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 333 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O15393 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 441 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 441 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 6 ? ASN A 12 ? ASP A 328 ASN A 334 1 ? 7 HELX_P HELX_P2 AA2 SER A 18 ? TRP A 22 ? SER A 340 TRP A 344 5 ? 5 HELX_P HELX_P3 AA3 ASN A 33 ? LEU A 40 ? ASN A 355 LEU A 362 1 ? 8 HELX_P HELX_P4 AA4 PRO A 72 ? GLN A 80 ? PRO A 394 GLN A 402 5 ? 9 HELX_P HELX_P5 AA5 GLY A 85 ? ASN A 91 ? GLY A 407 ASN A 413 1 ? 7 HELX_P HELX_P6 AA6 PRO A 108 ? VAL A 112 ? PRO A 430 VAL A 434 5 ? 5 HELX_P HELX_P7 AA7 ASP A 156 ? ASN A 161 ? ASP A 478 ASN A 483 1 ? 6 HELX_P HELX_P8 AA8 SER A 246 ? PHE A 250 ? SER A 568 PHE A 572 5 ? 5 HELX_P HELX_P9 AA9 GLY B 34 ? ARG B 39 ? GLY B 142 ARG B 147 1 ? 6 HELX_P HELX_P10 AB1 ASN B 69 ? ASP B 79 ? ASN B 177 ASP B 187 1 ? 11 HELX_P HELX_P11 AB2 GLU B 298 ? ASN B 303 ? GLU B 406 ASN B 411 1 ? 6 HELX_P HELX_P12 AB3 PHE B 372 ? ASP B 383 ? PHE B 480 ASP B 491 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 327 A CYS 352 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 370 A CYS 423 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 281 SG ? ? A CYS 382 A CYS 603 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf4 disulf ? ? A CYS 144 SG ? ? ? 1_555 A CYS 224 SG ? ? A CYS 466 A CYS 546 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf5 disulf ? ? A CYS 152 SG ? ? ? 1_555 A CYS 173 SG ? ? A CYS 474 A CYS 495 1_555 ? ? ? ? ? ? ? 1.987 ? ? disulf6 disulf ? ? A CYS 154 SG ? ? ? 1_555 A CYS 243 SG ? ? A CYS 476 A CYS 565 1_555 ? ? ? ? ? ? ? 1.993 ? ? disulf7 disulf ? ? A CYS 163 SG ? ? ? 1_555 A CYS 194 SG ? ? A CYS 485 A CYS 516 1_555 ? ? ? ? ? ? ? 1.985 ? ? disulf8 disulf ? ? A CYS 182 SG ? ? ? 1_555 A CYS 196 SG ? ? A CYS 504 A CYS 518 1_555 ? ? ? ? ? ? ? 1.994 ? ? disulf9 disulf ? ? A CYS 198 SG ? ? ? 1_555 A CYS 211 SG ? ? A CYS 520 A CYS 533 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf10 disulf ? ? A CYS 234 SG ? ? ? 1_555 A CYS 245 SG ? ? A CYS 556 A CYS 567 1_555 ? ? ? ? ? ? ? 1.998 ? ? disulf11 disulf ? ? A CYS 258 SG ? ? ? 1_555 A CYS 264 SG ? ? A CYS 580 A CYS 586 1_555 ? ? ? ? ? ? ? 2.009 ? ? disulf12 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 133 B CYS 148 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf13 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 123 SG ? ? B CYS 172 B CYS 231 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf14 disulf ? ? B CYS 77 SG ? ? ? 1_555 B CYS 133 SG ? ? B CYS 185 B CYS 241 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf15 disulf ? ? B CYS 136 SG ? ? ? 1_555 B CYS 257 SG ? ? B CYS 244 B CYS 365 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf16 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 189 SG ? ? B CYS 281 B CYS 297 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf17 disulf ? ? B CYS 302 SG ? ? ? 1_555 B CYS 318 SG ? ? B CYS 410 B CYS 426 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf18 disulf ? ? B CYS 329 SG ? ? ? 1_555 B CYS 357 SG ? ? B CYS 437 B CYS 465 1_555 ? ? ? ? ? ? ? 2.028 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 192 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 300 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 193 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 301 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 3 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 7 ? AB3 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB2 5 6 ? anti-parallel AB2 6 7 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB3 4 5 ? anti-parallel AB3 5 6 ? anti-parallel AB3 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 15 ? VAL A 16 ? SER A 337 VAL A 338 AA1 2 THR A 113 ? ILE A 114 ? THR A 435 ILE A 436 AA2 1 ARG A 25 ? PHE A 27 ? ARG A 347 PHE A 349 AA2 2 ILE A 64 ? VAL A 66 ? ILE A 386 VAL A 388 AA3 1 VAL A 43 ? ASN A 49 ? VAL A 365 ASN A 371 AA3 2 SER A 100 ? LEU A 107 ? SER A 422 LEU A 429 AA3 3 ARG A 263 ? PHE A 267 ? ARG A 585 PHE A 589 AA3 4 ILE A 259 ? SER A 260 ? ILE A 581 SER A 582 AA4 1 PHE A 69 ? ALA A 70 ? PHE A 391 ALA A 392 AA4 2 ARG A 263 ? PHE A 267 ? ARG A 585 PHE A 589 AA4 3 SER A 100 ? LEU A 107 ? SER A 422 LEU A 429 AA4 4 ASN A 269 ? ILE A 271 ? ASN A 591 ILE A 593 AA5 1 ASP A 137 ? SER A 141 ? ASP A 459 SER A 463 AA5 2 TRP A 253 ? SER A 257 ? TRP A 575 SER A 579 AA6 1 CYS A 144 ? SER A 146 ? CYS A 466 SER A 468 AA6 2 LYS A 214 ? VAL A 216 ? LYS A 536 VAL A 538 AA7 1 ASP A 185 ? THR A 187 ? ASP A 507 THR A 509 AA7 2 VAL A 190 ? TRP A 193 ? VAL A 512 TRP A 515 AA8 1 VAL B 41 ? ARG B 42 ? VAL B 149 ARG B 150 AA8 2 GLN B 51 ? SER B 54 ? GLN B 159 SER B 162 AA8 3 SER B 59 ? PRO B 62 ? SER B 167 PRO B 170 AA9 1 SER B 88 ? ILE B 92 ? SER B 196 ILE B 200 AA9 2 VAL B 128 ? ARG B 132 ? VAL B 236 ARG B 240 AB1 1 PHE B 101 ? LYS B 103 ? PHE B 209 LYS B 211 AB1 2 TYR B 118 ? SER B 120 ? TYR B 226 SER B 228 AB2 1 GLN B 162 ? VAL B 167 ? GLN B 270 VAL B 275 AB2 2 VAL B 170 ? ILE B 177 ? VAL B 278 ILE B 285 AB2 3 TRP B 182 ? THR B 185 ? TRP B 290 THR B 293 AB2 4 ALA B 239 ? LEU B 243 ? ALA B 347 LEU B 351 AB2 5 GLY B 217 ? SER B 225 ? GLY B 325 SER B 333 AB2 6 TRP B 200 ? ALA B 204 ? TRP B 308 ALA B 312 AB2 7 GLN B 162 ? VAL B 167 ? GLN B 270 VAL B 275 AB3 1 LEU B 270 ? GLY B 275 ? LEU B 378 GLY B 383 AB3 2 ASN B 290 ? ILE B 297 ? ASN B 398 ILE B 405 AB3 3 MET B 316 ? ALA B 319 ? MET B 424 ALA B 427 AB3 4 GLY B 364 ? ASN B 368 ? GLY B 472 ASN B 476 AB3 5 ILE B 344 ? GLY B 354 ? ILE B 452 GLY B 462 AB3 6 PRO B 336 ? LYS B 341 ? PRO B 444 LYS B 449 AB3 7 LEU B 270 ? GLY B 275 ? LEU B 378 GLY B 383 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 16 ? N VAL A 338 O THR A 113 ? O THR A 435 AA2 1 2 N PHE A 27 ? N PHE A 349 O ILE A 64 ? O ILE A 386 AA3 1 2 N ASN A 49 ? N ASN A 371 O SER A 100 ? O SER A 422 AA3 2 3 N TYR A 105 ? N TYR A 427 O ILE A 266 ? O ILE A 588 AA3 3 4 O ARG A 263 ? O ARG A 585 N SER A 260 ? N SER A 582 AA4 1 2 N PHE A 69 ? N PHE A 391 O PHE A 267 ? O PHE A 589 AA4 2 3 O ILE A 266 ? O ILE A 588 N TYR A 105 ? N TYR A 427 AA4 3 4 N CYS A 101 ? N CYS A 423 O PHE A 270 ? O PHE A 592 AA5 1 2 N VAL A 138 ? N VAL A 460 O ASP A 256 ? O ASP A 578 AA6 1 2 N SER A 146 ? N SER A 468 O LYS A 214 ? O LYS A 536 AA7 1 2 N ASP A 185 ? N ASP A 507 O TRP A 193 ? O TRP A 515 AA8 1 2 N ARG B 42 ? N ARG B 150 O GLN B 51 ? O GLN B 159 AA8 2 3 N SER B 54 ? N SER B 162 O SER B 59 ? O SER B 167 AA9 1 2 N ILE B 92 ? N ILE B 200 O VAL B 128 ? O VAL B 236 AB1 1 2 N LYS B 103 ? N LYS B 211 O TYR B 118 ? O TYR B 226 AB2 1 2 N VAL B 163 ? N VAL B 271 O GLY B 175 ? O GLY B 283 AB2 2 3 N SER B 176 ? N SER B 284 O VAL B 184 ? O VAL B 292 AB2 3 4 N ILE B 183 ? N ILE B 291 O MET B 241 ? O MET B 349 AB2 4 5 O LYS B 242 ? O LYS B 350 N GLU B 221 ? N GLU B 329 AB2 5 6 O TYR B 218 ? O TYR B 326 N ALA B 202 ? N ALA B 310 AB2 6 7 O THR B 201 ? O THR B 309 N HIS B 166 ? N HIS B 274 AB3 1 2 N ILE B 273 ? N ILE B 381 O ALA B 292 ? O ALA B 400 AB3 2 3 N ILE B 297 ? N ILE B 405 O CYS B 318 ? O CYS B 426 AB3 3 4 N ILE B 317 ? N ILE B 425 O TYR B 366 ? O TYR B 474 AB3 4 5 O GLY B 367 ? O GLY B 475 N ASP B 350 ? N ASP B 458 AB3 5 6 O ILE B 348 ? O ILE B 456 N LEU B 337 ? N LEU B 445 AB3 6 7 O VAL B 338 ? O VAL B 446 N TRP B 272 ? N TRP B 380 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O4 B NAG 501 ? ? H1 B NAG 502 ? ? 1.40 2 1 O3 B NAG 501 ? ? O5 B NAG 502 ? ? 1.45 3 1 ND2 A ASN 355 ? ? O1 A NAG 703 ? ? 1.79 4 1 O A ASN 605 ? ? N A LEU 607 ? ? 1.91 5 1 O3 B NAG 501 ? ? C1 B NAG 502 ? ? 2.08 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 372 ? ? 58.04 19.15 2 1 TYR A 414 ? ? -160.97 114.34 3 1 ASN A 440 ? ? -158.03 78.19 4 1 SER A 442 ? ? 173.71 154.39 5 1 ARG A 446 ? ? -146.82 -1.07 6 1 TYR A 448 ? ? -108.31 54.81 7 1 ASN A 454 ? ? -53.50 97.60 8 1 SER A 456 ? ? -101.60 -166.91 9 1 TYR A 458 ? ? -174.57 57.49 10 1 HIS A 465 ? ? 172.63 111.57 11 1 SER A 471 ? ? -88.57 49.25 12 1 ASP A 472 ? ? -161.28 -6.04 13 1 ASN A 483 ? ? -58.31 0.61 14 1 ALA A 486 ? ? -164.13 3.37 15 1 LYS A 489 ? ? -50.40 98.74 16 1 ALA A 497 ? ? -39.51 105.33 17 1 CYS A 504 ? ? -166.77 118.96 18 1 LEU A 510 ? ? 38.23 -91.12 19 1 ASN A 514 ? ? 31.15 67.65 20 1 ARG A 517 ? ? -107.80 74.95 21 1 SER A 519 ? ? -68.74 -179.39 22 1 CYS A 520 ? ? 24.69 78.99 23 1 PRO A 522 ? ? -56.13 -84.61 24 1 VAL A 540 ? ? -68.19 -168.28 25 1 ILE A 542 ? ? -37.29 113.60 26 1 HIS A 545 ? ? -79.68 -161.19 27 1 LEU A 549 ? ? -107.07 -140.85 28 1 HIS A 562 ? ? -56.39 59.86 29 1 PHE A 577 ? ? -106.34 75.80 30 1 SER A 579 ? ? -82.88 -157.17 31 1 CYS A 580 ? ? -144.62 24.76 32 1 ASN A 583 ? ? -24.01 102.85 33 1 ASN A 584 ? ? 20.05 48.28 34 1 PHE A 592 ? ? -24.70 95.29 35 1 PHE A 594 ? ? -113.78 -164.33 36 1 ASN A 595 ? ? 169.66 125.42 37 1 ASN A 598 ? ? 33.48 40.42 38 1 THR A 602 ? ? -100.35 56.79 39 1 ASP A 606 ? ? -37.82 15.01 40 1 LYS B 191 ? ? 53.46 -131.00 41 1 SER B 251 ? ? -95.14 -60.61 42 1 VAL B 280 ? ? -123.38 -53.67 43 1 THR B 293 ? ? -161.71 -167.77 44 1 LEU B 302 ? ? -96.34 31.00 45 1 TRP B 384 ? ? -92.97 30.96 46 1 LYS B 390 ? ? 56.79 12.36 47 1 ASN B 433 ? ? 71.65 -8.89 48 1 TYR B 469 ? ? 68.56 -4.27 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 446 ? ? 0.182 'SIDE CHAIN' 2 1 ARG A 447 ? ? 0.178 'SIDE CHAIN' 3 1 ARG A 502 ? ? 0.140 'SIDE CHAIN' 4 1 ARG A 517 ? ? 0.295 'SIDE CHAIN' 5 1 ARG A 585 ? ? 0.258 'SIDE CHAIN' # _pdbx_entry_details.entry_id 8YQQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8YQQ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8YQQ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.95 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 709482 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'HKU1B-RBD with TMPRSS2 receptor' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8YQQ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1800 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_vitrification.entry_id 8YQQ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8YQQ _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 109 ? B MET 1 2 1 Y 1 B GLY 110 ? B GLY 2 3 1 Y 1 B SER 111 ? B SER 3 4 1 Y 1 B LYS 112 ? B LYS 4 5 1 Y 1 B CYS 113 ? B CYS 5 6 1 Y 1 B SER 114 ? B SER 6 7 1 Y 1 B ASN 115 ? B ASN 7 8 1 Y 1 B SER 116 ? B SER 8 9 1 Y 1 B GLY 117 ? B GLY 9 10 1 Y 1 B ILE 118 ? B ILE 10 11 1 Y 1 B GLU 119 ? B GLU 11 12 1 Y 1 B CYS 120 ? B CYS 12 13 1 Y 1 B ASP 121 ? B ASP 13 14 1 Y 1 B SER 122 ? B SER 14 15 1 Y 1 B SER 123 ? B SER 15 16 1 Y 1 B GLY 124 ? B GLY 16 17 1 Y 1 B THR 125 ? B THR 17 18 1 Y 1 B CYS 126 ? B CYS 18 19 1 Y 1 B ILE 127 ? B ILE 19 20 1 Y 1 B ASN 128 ? B ASN 20 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-03-19 _em_admin.deposition_site PDBJ _em_admin.entry_id 8YQQ _em_admin.last_update 2024-08-28 _em_admin.map_release_date 2024-08-28 _em_admin.title 'Structure of HKU1B RBD with TMPRSS2' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 274590 _em_entity_assembly_recombinant.organism 'Baculovirus expression vector pFastBac1-HM' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 55 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8YQQ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_