HEADER PROTEIN BINDING 12-APR-24 8Z22 TITLE CRYSTAL STRUCTURE OF THE LIPRIN-ALPHA2/RIM1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS 1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: AUTHOR'S SEQUENCE REFERENCE IS GENBANK: COMPND 6 XM_017596673.1; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: LIPRIN-ALPHA-2; COMPND 9 CHAIN: C, D; COMPND 10 SYNONYM: PROTEIN TYROSINE PHOSPHATASE RECEPTOR TYPE F POLYPEPTIDE- COMPND 11 INTERACTING PROTEIN ALPHA-2,PTPRF-INTERACTING PROTEIN ALPHA-2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: RIMS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PPFIA2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COILED COIL, COMPLEX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.JIN,Z.WEI REVDAT 3 22-OCT-25 8Z22 1 JRNL REVDAT 2 09-APR-25 8Z22 1 REMARK REVDAT 1 02-APR-25 8Z22 0 JRNL AUTH G.JIN,J.CAMPOS,Y.LIU,B.M.DE LA CRUZ,S.ZHANG,M.LIANG,K.LI, JRNL AUTH 2 X.XIE,F.H.STERKY,C.ACUNA,Z.WEI JRNL TITL THE LIPRIN-ALPHA /RIM COMPLEX REGULATES THE DYNAMIC ASSEMBLY JRNL TITL 2 OF PRESYNAPTIC ACTIVE ZONES VIA LIQUID-LIQUID PHASE JRNL TITL 3 SEPARATION. JRNL REF PLOS BIOL. V. 23 02817 2025 JRNL REFN ESSN 1545-7885 JRNL PMID 40493522 JRNL DOI 10.1371/JOURNAL.PBIO.3002817 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 17881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.8000 - 4.9900 0.98 2868 151 0.1743 0.2096 REMARK 3 2 4.9900 - 3.9700 0.99 2834 149 0.1619 0.1746 REMARK 3 3 3.9600 - 3.4600 0.98 2791 147 0.2484 0.2865 REMARK 3 4 3.4600 - 3.1500 0.99 2845 150 0.2350 0.2743 REMARK 3 5 3.1500 - 2.9200 1.00 2847 149 0.2449 0.2579 REMARK 3 6 2.9200 - 2.7500 0.99 2802 148 0.2899 0.3225 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3882 REMARK 3 ANGLE : 0.500 5212 REMARK 3 CHIRALITY : 0.040 581 REMARK 3 PLANARITY : 0.004 677 REMARK 3 DIHEDRAL : 21.236 1550 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 310 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4540 0.7136 4.5677 REMARK 3 T TENSOR REMARK 3 T11: 0.5587 T22: 0.6516 REMARK 3 T33: 0.4711 T12: 0.0136 REMARK 3 T13: -0.0106 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 7.2752 L22: 1.5929 REMARK 3 L33: 0.0962 L12: -2.8123 REMARK 3 L13: 0.8699 L23: -0.4238 REMARK 3 S TENSOR REMARK 3 S11: -0.2166 S12: 0.4962 S13: 0.3043 REMARK 3 S21: 0.3439 S22: -0.0850 S23: -0.0768 REMARK 3 S31: -0.0743 S32: 0.0901 S33: 0.3220 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1163 THROUGH 1182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8661 -0.8461 29.4673 REMARK 3 T TENSOR REMARK 3 T11: 0.6192 T22: 0.5652 REMARK 3 T33: 0.5088 T12: -0.0813 REMARK 3 T13: -0.0495 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 5.1919 L22: 3.9535 REMARK 3 L33: 8.3959 L12: -1.2007 REMARK 3 L13: 1.5689 L23: -0.5466 REMARK 3 S TENSOR REMARK 3 S11: 0.2613 S12: -0.1605 S13: 0.5534 REMARK 3 S21: 0.4725 S22: -0.1022 S23: -0.3126 REMARK 3 S31: -0.5752 S32: 1.3352 S33: 0.0469 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1183 THROUGH 1203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3839 -7.3312 16.8788 REMARK 3 T TENSOR REMARK 3 T11: 0.3496 T22: 0.6301 REMARK 3 T33: 0.4016 T12: 0.0274 REMARK 3 T13: 0.0046 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 4.2499 L22: 2.9011 REMARK 3 L33: 1.3390 L12: -0.6453 REMARK 3 L13: 0.1753 L23: -0.7915 REMARK 3 S TENSOR REMARK 3 S11: -0.5219 S12: 0.2341 S13: 0.2857 REMARK 3 S21: -0.0789 S22: 0.2673 S23: -0.0411 REMARK 3 S31: -0.3022 S32: -0.4386 S33: 0.1902 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1204 THROUGH 1225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1468 -17.6684 26.0871 REMARK 3 T TENSOR REMARK 3 T11: 0.5127 T22: 0.3455 REMARK 3 T33: 0.5252 T12: 0.0440 REMARK 3 T13: -0.0614 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.2692 L22: 2.2275 REMARK 3 L33: 2.9858 L12: 0.1205 REMARK 3 L13: -0.6255 L23: 0.9661 REMARK 3 S TENSOR REMARK 3 S11: -0.4724 S12: -0.3404 S13: -0.6054 REMARK 3 S21: 0.4976 S22: 0.2090 S23: -0.1803 REMARK 3 S31: 0.7180 S32: 0.1885 S33: 0.3337 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1226 THROUGH 1258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5779 -14.2659 21.3829 REMARK 3 T TENSOR REMARK 3 T11: 0.5910 T22: 0.4454 REMARK 3 T33: 0.4117 T12: -0.0519 REMARK 3 T13: 0.0547 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.3400 L22: 1.2205 REMARK 3 L33: 2.3545 L12: 0.7856 REMARK 3 L13: 0.7854 L23: 0.7829 REMARK 3 S TENSOR REMARK 3 S11: -0.1134 S12: 0.1836 S13: -0.1915 REMARK 3 S21: 0.1084 S22: -0.0211 S23: 0.2050 REMARK 3 S31: 0.1540 S32: -0.4311 S33: 0.1193 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1259 THROUGH 1279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6377 -19.2122 28.4580 REMARK 3 T TENSOR REMARK 3 T11: 0.5827 T22: 0.3629 REMARK 3 T33: 0.4475 T12: -0.0554 REMARK 3 T13: 0.0099 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.7184 L22: 3.0706 REMARK 3 L33: 1.1476 L12: -0.6055 REMARK 3 L13: 0.1982 L23: 1.0992 REMARK 3 S TENSOR REMARK 3 S11: 0.0464 S12: 0.7032 S13: -0.1750 REMARK 3 S21: 0.8243 S22: -0.3284 S23: -0.4445 REMARK 3 S31: 0.4841 S32: 0.1475 S33: 0.2954 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1280 THROUGH 1313 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4774 -1.5555 26.5746 REMARK 3 T TENSOR REMARK 3 T11: 0.4934 T22: 0.4719 REMARK 3 T33: 0.4133 T12: -0.0190 REMARK 3 T13: 0.0320 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 1.6285 L22: 0.7035 REMARK 3 L33: 3.7307 L12: -0.3155 REMARK 3 L13: 0.1841 L23: 0.3194 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: 0.3008 S13: 0.2896 REMARK 3 S21: 0.1500 S22: 0.2489 S23: 0.0675 REMARK 3 S31: -0.2333 S32: 0.3622 S33: -0.1483 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1164 THROUGH 1182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7076 -15.4157 46.3802 REMARK 3 T TENSOR REMARK 3 T11: 0.7216 T22: 0.5372 REMARK 3 T33: 0.5464 T12: -0.0278 REMARK 3 T13: -0.0560 T23: 0.0856 REMARK 3 L TENSOR REMARK 3 L11: 4.4373 L22: 1.2105 REMARK 3 L33: 2.6407 L12: 0.4436 REMARK 3 L13: 3.3129 L23: -0.1522 REMARK 3 S TENSOR REMARK 3 S11: 0.3288 S12: -0.6375 S13: -0.6739 REMARK 3 S21: 0.0802 S22: 0.1008 S23: -0.3988 REMARK 3 S31: 1.2216 S32: 0.1070 S33: -0.1886 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1183 THROUGH 1203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5160 -0.0165 55.3315 REMARK 3 T TENSOR REMARK 3 T11: 0.3765 T22: 0.4915 REMARK 3 T33: 0.4649 T12: 0.0342 REMARK 3 T13: 0.0303 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 5.8001 L22: 2.7508 REMARK 3 L33: 4.3268 L12: 0.1238 REMARK 3 L13: 0.8775 L23: -1.0834 REMARK 3 S TENSOR REMARK 3 S11: 0.1645 S12: -0.2569 S13: 0.2724 REMARK 3 S21: -0.1633 S22: 0.1409 S23: 0.1617 REMARK 3 S31: -0.1395 S32: -0.8684 S33: -0.2782 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1204 THROUGH 1225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8400 -5.2543 52.4630 REMARK 3 T TENSOR REMARK 3 T11: 0.3515 T22: 0.6453 REMARK 3 T33: 0.4848 T12: 0.1061 REMARK 3 T13: 0.0666 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 5.6201 L22: 3.3014 REMARK 3 L33: 3.6268 L12: -0.3168 REMARK 3 L13: 1.9699 L23: 1.4586 REMARK 3 S TENSOR REMARK 3 S11: -0.3962 S12: 0.0367 S13: 0.2215 REMARK 3 S21: 0.2362 S22: 0.2573 S23: -0.8950 REMARK 3 S31: 0.1617 S32: 0.7445 S33: 0.2479 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1226 THROUGH 1247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5337 0.6097 54.4104 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.4650 REMARK 3 T33: 0.4565 T12: -0.0012 REMARK 3 T13: 0.0157 T23: -0.0555 REMARK 3 L TENSOR REMARK 3 L11: 2.5710 L22: 1.5177 REMARK 3 L33: 3.1764 L12: -0.9903 REMARK 3 L13: 1.1756 L23: -0.6913 REMARK 3 S TENSOR REMARK 3 S11: -0.1821 S12: -0.4706 S13: 0.3924 REMARK 3 S21: -0.2058 S22: -0.0205 S23: -0.3074 REMARK 3 S31: 0.0699 S32: -0.2336 S33: 0.2213 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1248 THROUGH 1259 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5641 6.0355 47.6901 REMARK 3 T TENSOR REMARK 3 T11: 0.5502 T22: 0.4963 REMARK 3 T33: 0.5384 T12: 0.1111 REMARK 3 T13: -0.0999 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 4.6200 L22: 2.4318 REMARK 3 L33: 8.3291 L12: 0.2521 REMARK 3 L13: 4.1951 L23: 1.6855 REMARK 3 S TENSOR REMARK 3 S11: -0.1260 S12: 0.2536 S13: 0.9537 REMARK 3 S21: -0.7459 S22: -0.3016 S23: 0.2845 REMARK 3 S31: -0.8782 S32: -0.7689 S33: 0.1037 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1260 THROUGH 1279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3747 -3.3076 49.6661 REMARK 3 T TENSOR REMARK 3 T11: 0.4891 T22: 0.6789 REMARK 3 T33: 0.4952 T12: -0.0424 REMARK 3 T13: 0.1014 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 5.1536 L22: 2.9586 REMARK 3 L33: 4.9937 L12: 0.3137 REMARK 3 L13: 1.5926 L23: 0.2987 REMARK 3 S TENSOR REMARK 3 S11: -0.2953 S12: 0.8975 S13: 0.2575 REMARK 3 S21: -0.1847 S22: 0.1227 S23: -0.6860 REMARK 3 S31: -0.4664 S32: 1.7893 S33: 0.1009 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1280 THROUGH 1299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4714 -5.4883 50.0375 REMARK 3 T TENSOR REMARK 3 T11: 0.3796 T22: 0.4265 REMARK 3 T33: 0.3833 T12: 0.0289 REMARK 3 T13: -0.0212 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.5647 L22: 2.3684 REMARK 3 L33: 3.0958 L12: -0.6798 REMARK 3 L13: -0.4181 L23: -0.7409 REMARK 3 S TENSOR REMARK 3 S11: -0.3618 S12: -0.0162 S13: -0.2841 REMARK 3 S21: -0.1928 S22: 0.3294 S23: 0.3574 REMARK 3 S31: 0.2062 S32: -0.2627 S33: -0.0154 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1300 THROUGH 1313 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0227 -13.6730 41.6145 REMARK 3 T TENSOR REMARK 3 T11: 0.5844 T22: 0.6590 REMARK 3 T33: 0.4107 T12: -0.0568 REMARK 3 T13: 0.0379 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 4.6578 L22: 1.3281 REMARK 3 L33: 4.1367 L12: -2.0899 REMARK 3 L13: 1.7653 L23: 0.3342 REMARK 3 S TENSOR REMARK 3 S11: 0.4134 S12: 0.2428 S13: -1.0040 REMARK 3 S21: -0.6369 S22: -0.3624 S23: 0.0167 REMARK 3 S31: 0.8014 S32: 0.1448 S33: -0.0505 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 309 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7236 0.4774 69.8240 REMARK 3 T TENSOR REMARK 3 T11: 0.3952 T22: 0.4650 REMARK 3 T33: 0.4629 T12: -0.0127 REMARK 3 T13: 0.0183 T23: 0.1563 REMARK 3 L TENSOR REMARK 3 L11: 4.2101 L22: 0.4725 REMARK 3 L33: 0.6312 L12: -0.7402 REMARK 3 L13: 0.8164 L23: 0.0296 REMARK 3 S TENSOR REMARK 3 S11: -0.0898 S12: -0.4904 S13: 0.0385 REMARK 3 S21: 0.0457 S22: 0.1272 S23: 0.0721 REMARK 3 S31: -0.0168 S32: 0.0143 S33: -0.0659 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Z22 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 15-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300044258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18054 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 1.15100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% V/V 2-PROPANOL; 0.1M BIS-TRIS PH REMARK 280 6.5; 3% V/V POLYETHYLENE GLYCOL 200, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.34850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -14.92129 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 64.88953 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 1160 REMARK 465 MET A 1161 REMARK 465 GLY A 1162 REMARK 465 THR A 1175 REMARK 465 LEU A 1176 REMARK 465 ALA A 1177 REMARK 465 LEU A 1314 REMARK 465 THR A 1315 REMARK 465 ARG A 1316 REMARK 465 ARG A 1317 REMARK 465 ALA A 1318 REMARK 465 SER A 1319 REMARK 465 GLN A 1320 REMARK 465 SER A 1321 REMARK 465 SER A 1322 REMARK 465 LEU A 1323 REMARK 465 GLU A 1324 REMARK 465 SER A 1325 REMARK 465 SER A 1326 REMARK 465 SER A 1327 REMARK 465 GLY A 1328 REMARK 465 PRO A 1329 REMARK 465 PRO A 1330 REMARK 465 CYS A 1331 REMARK 465 ILE A 1332 REMARK 465 ARG A 1333 REMARK 465 SER A 1334 REMARK 465 HIS B 1160 REMARK 465 MET B 1161 REMARK 465 GLY B 1162 REMARK 465 SER B 1163 REMARK 465 THR B 1175 REMARK 465 LEU B 1176 REMARK 465 ALA B 1177 REMARK 465 LEU B 1314 REMARK 465 THR B 1315 REMARK 465 ARG B 1316 REMARK 465 ARG B 1317 REMARK 465 ALA B 1318 REMARK 465 SER B 1319 REMARK 465 GLN B 1320 REMARK 465 SER B 1321 REMARK 465 SER B 1322 REMARK 465 LEU B 1323 REMARK 465 GLU B 1324 REMARK 465 SER B 1325 REMARK 465 SER B 1326 REMARK 465 SER B 1327 REMARK 465 GLY B 1328 REMARK 465 PRO B 1329 REMARK 465 PRO B 1330 REMARK 465 CYS B 1331 REMARK 465 ILE B 1332 REMARK 465 ARG B 1333 REMARK 465 SER B 1334 REMARK 465 GLY C 294 REMARK 465 PRO C 295 REMARK 465 GLY C 296 REMARK 465 SER C 297 REMARK 465 GLU C 298 REMARK 465 PHE C 299 REMARK 465 GLU C 300 REMARK 465 VAL C 301 REMARK 465 GLU C 302 REMARK 465 GLN C 303 REMARK 465 GLU C 304 REMARK 465 ALA C 305 REMARK 465 GLU C 306 REMARK 465 THR C 307 REMARK 465 ALA C 308 REMARK 465 LYS C 402 REMARK 465 ALA C 403 REMARK 465 GLU C 404 REMARK 465 GLY D 294 REMARK 465 PRO D 295 REMARK 465 GLY D 296 REMARK 465 SER D 297 REMARK 465 GLU D 298 REMARK 465 PHE D 299 REMARK 465 GLU D 300 REMARK 465 VAL D 301 REMARK 465 GLU D 302 REMARK 465 GLN D 303 REMARK 465 GLU D 304 REMARK 465 ALA D 305 REMARK 465 GLU D 306 REMARK 465 THR D 307 REMARK 465 ALA D 308 REMARK 465 ARG D 309 REMARK 465 ARG D 401 REMARK 465 LYS D 402 REMARK 465 ALA D 403 REMARK 465 GLU D 404 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B1271 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 309 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 310 CG CD CE NZ DBREF1 8Z22 A 1166 1334 UNP A0A8I6GEN0_RAT DBREF2 8Z22 A A0A8I6GEN0 675 843 DBREF1 8Z22 B 1166 1334 UNP A0A8I6GEN0_RAT DBREF2 8Z22 B A0A8I6GEN0 675 843 DBREF 8Z22 C 300 404 UNP O75334 LIPA2_HUMAN 300 404 DBREF 8Z22 D 300 404 UNP O75334 LIPA2_HUMAN 300 404 SEQADV 8Z22 HIS A 1160 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 MET A 1161 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 GLY A 1162 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 SER A 1163 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 GLU A 1164 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 PHE A 1165 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 HIS B 1160 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 MET B 1161 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 GLY B 1162 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 SER B 1163 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 GLU B 1164 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 PHE B 1165 UNP A0A8I6GEN EXPRESSION TAG SEQADV 8Z22 GLY C 294 UNP O75334 EXPRESSION TAG SEQADV 8Z22 PRO C 295 UNP O75334 EXPRESSION TAG SEQADV 8Z22 GLY C 296 UNP O75334 EXPRESSION TAG SEQADV 8Z22 SER C 297 UNP O75334 EXPRESSION TAG SEQADV 8Z22 GLU C 298 UNP O75334 EXPRESSION TAG SEQADV 8Z22 PHE C 299 UNP O75334 EXPRESSION TAG SEQADV 8Z22 GLY D 294 UNP O75334 EXPRESSION TAG SEQADV 8Z22 PRO D 295 UNP O75334 EXPRESSION TAG SEQADV 8Z22 GLY D 296 UNP O75334 EXPRESSION TAG SEQADV 8Z22 SER D 297 UNP O75334 EXPRESSION TAG SEQADV 8Z22 GLU D 298 UNP O75334 EXPRESSION TAG SEQADV 8Z22 PHE D 299 UNP O75334 EXPRESSION TAG SEQRES 1 A 175 HIS MET GLY SER GLU PHE GLY PRO ALA GLN LEU VAL GLY SEQRES 2 A 175 ARG GLN THR LEU ALA THR PRO ALA MET GLY ASP ILE GLN SEQRES 3 A 175 ILE GLY MET GLU ASP LYS LYS GLY GLN LEU GLU VAL GLU SEQRES 4 A 175 VAL ILE ARG ALA ARG SER LEU THR GLN LYS PRO GLY SER SEQRES 5 A 175 LYS SER THR PRO ALA PRO TYR VAL LYS VAL TYR LEU LEU SEQRES 6 A 175 GLU ASN GLY ALA CYS ILE ALA LYS LYS LYS THR ARG ILE SEQRES 7 A 175 ALA ARG LYS THR LEU ASP PRO LEU TYR GLN GLN SER LEU SEQRES 8 A 175 VAL PHE ASP GLU SER PRO GLN GLY LYS VAL LEU GLN VAL SEQRES 9 A 175 ILE VAL TRP GLY ASP TYR GLY ARG MET ASP HIS LYS CYS SEQRES 10 A 175 PHE MET GLY VAL ALA GLN ILE LEU LEU GLU GLU LEU ASP SEQRES 11 A 175 LEU SER SER MET VAL ILE GLY TRP TYR LYS LEU PHE PRO SEQRES 12 A 175 PRO SER SER LEU VAL ASP PRO THR LEU ALA PRO LEU THR SEQRES 13 A 175 ARG ARG ALA SER GLN SER SER LEU GLU SER SER SER GLY SEQRES 14 A 175 PRO PRO CYS ILE ARG SER SEQRES 1 B 175 HIS MET GLY SER GLU PHE GLY PRO ALA GLN LEU VAL GLY SEQRES 2 B 175 ARG GLN THR LEU ALA THR PRO ALA MET GLY ASP ILE GLN SEQRES 3 B 175 ILE GLY MET GLU ASP LYS LYS GLY GLN LEU GLU VAL GLU SEQRES 4 B 175 VAL ILE ARG ALA ARG SER LEU THR GLN LYS PRO GLY SER SEQRES 5 B 175 LYS SER THR PRO ALA PRO TYR VAL LYS VAL TYR LEU LEU SEQRES 6 B 175 GLU ASN GLY ALA CYS ILE ALA LYS LYS LYS THR ARG ILE SEQRES 7 B 175 ALA ARG LYS THR LEU ASP PRO LEU TYR GLN GLN SER LEU SEQRES 8 B 175 VAL PHE ASP GLU SER PRO GLN GLY LYS VAL LEU GLN VAL SEQRES 9 B 175 ILE VAL TRP GLY ASP TYR GLY ARG MET ASP HIS LYS CYS SEQRES 10 B 175 PHE MET GLY VAL ALA GLN ILE LEU LEU GLU GLU LEU ASP SEQRES 11 B 175 LEU SER SER MET VAL ILE GLY TRP TYR LYS LEU PHE PRO SEQRES 12 B 175 PRO SER SER LEU VAL ASP PRO THR LEU ALA PRO LEU THR SEQRES 13 B 175 ARG ARG ALA SER GLN SER SER LEU GLU SER SER SER GLY SEQRES 14 B 175 PRO PRO CYS ILE ARG SER SEQRES 1 C 111 GLY PRO GLY SER GLU PHE GLU VAL GLU GLN GLU ALA GLU SEQRES 2 C 111 THR ALA ARG LYS ASP LEU ILE LYS THR GLU GLU MET ASN SEQRES 3 C 111 THR LYS TYR GLN ARG ASP ILE ARG GLU ALA MET ALA GLN SEQRES 4 C 111 LYS GLU ASP MET GLU GLU ARG ILE THR THR LEU GLU LYS SEQRES 5 C 111 ARG TYR LEU SER ALA GLN ARG GLU SER THR SER ILE HIS SEQRES 6 C 111 ASP MET ASN ASP LYS LEU GLU ASN GLU LEU ALA ASN LYS SEQRES 7 C 111 GLU ALA ILE LEU ARG GLN MET GLU GLU LYS ASN ARG GLN SEQRES 8 C 111 LEU GLN GLU ARG LEU GLU LEU ALA GLU GLN LYS LEU GLN SEQRES 9 C 111 GLN THR MET ARG LYS ALA GLU SEQRES 1 D 111 GLY PRO GLY SER GLU PHE GLU VAL GLU GLN GLU ALA GLU SEQRES 2 D 111 THR ALA ARG LYS ASP LEU ILE LYS THR GLU GLU MET ASN SEQRES 3 D 111 THR LYS TYR GLN ARG ASP ILE ARG GLU ALA MET ALA GLN SEQRES 4 D 111 LYS GLU ASP MET GLU GLU ARG ILE THR THR LEU GLU LYS SEQRES 5 D 111 ARG TYR LEU SER ALA GLN ARG GLU SER THR SER ILE HIS SEQRES 6 D 111 ASP MET ASN ASP LYS LEU GLU ASN GLU LEU ALA ASN LYS SEQRES 7 D 111 GLU ALA ILE LEU ARG GLN MET GLU GLU LYS ASN ARG GLN SEQRES 8 D 111 LEU GLN GLU ARG LEU GLU LEU ALA GLU GLN LYS LEU GLN SEQRES 9 D 111 GLN THR MET ARG LYS ALA GLU FORMUL 5 HOH *20(H2 O) HELIX 1 AA1 GLU A 1286 LEU A 1288 5 3 HELIX 2 AA2 PRO A 1302 VAL A 1307 5 6 HELIX 3 AA3 GLU B 1286 LEU B 1288 5 3 HELIX 4 AA4 PRO B 1302 VAL B 1307 5 6 HELIX 5 AA5 LYS C 310 ARG C 401 1 92 HELIX 6 AA6 ASP D 311 MET D 400 1 90 SHEET 1 AA1 6 ALA A1228 LYS A1234 0 SHEET 2 AA1 6 ALA A1216 GLU A1225 -1 N GLU A1225 O ALA A1228 SHEET 3 AA1 6 LYS A1259 ASP A1268 -1 O GLN A1262 N TYR A1222 SHEET 4 AA1 6 CYS A1276 LEU A1284 -1 O ILE A1283 N LEU A1261 SHEET 5 AA1 6 GLN A1169 GLY A1172 -1 N LEU A1170 O GLN A1282 SHEET 6 AA1 6 PRO A1309 LEU A1311 -1 O THR A1310 N VAL A1171 SHEET 1 AA2 4 LEU A1245 PHE A1252 0 SHEET 2 AA2 4 GLN A1194 ARG A1203 -1 N VAL A1197 O LEU A1250 SHEET 3 AA2 4 ASP A1183 LYS A1191 -1 N GLU A1189 O GLU A1196 SHEET 4 AA2 4 VAL A1294 LYS A1299 -1 O TYR A1298 N ILE A1184 SHEET 1 AA3 6 ALA B1228 LYS B1234 0 SHEET 2 AA3 6 ALA B1216 GLU B1225 -1 N VAL B1221 O LYS B1233 SHEET 3 AA3 6 VAL B1260 ASP B1268 -1 O GLN B1262 N TYR B1222 SHEET 4 AA3 6 CYS B1276 LEU B1284 -1 O ILE B1283 N LEU B1261 SHEET 5 AA3 6 GLN B1169 GLY B1172 -1 N LEU B1170 O GLN B1282 SHEET 6 AA3 6 PRO B1309 LEU B1311 -1 O THR B1310 N VAL B1171 SHEET 1 AA4 4 LEU B1245 PHE B1252 0 SHEET 2 AA4 4 GLN B1194 ARG B1203 -1 N VAL B1197 O LEU B1250 SHEET 3 AA4 4 ASP B1183 LYS B1191 -1 N GLN B1185 O ARG B1201 SHEET 4 AA4 4 VAL B1294 LYS B1299 -1 O TYR B1298 N ILE B1184 CRYST1 58.663 92.697 66.583 90.00 102.95 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017047 0.000000 0.003920 0.00000 SCALE2 0.000000 0.010788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015411 0.00000 MASTER 538 0 0 6 20 0 0 6 3852 4 0 46 END