HEADER TRANSFERASE 18-APR-24 8Z55 TITLE CRYSTAL STRUCTURE OF HUMAN SIRT5 IN COMPLEX WITH SUCCPRX1 AND ADP TITLE 2 RIBOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: REGULATORY PROTEIN SIR2 HOMOLOG 5,SIR2-LIKE PROTEIN 5; COMPND 5 EC: 2.3.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEROXIREDOXIN-1 FRAGMENT; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PRX1 FRAGMENT; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT5, SIR2L5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS SIRT5, SUCCINYL LYSINE, DEACYLASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.YOKOYAMA,Y.TAKAYAMA REVDAT 1 09-OCT-24 8Z55 0 JRNL AUTH T.YOKOYAMA,Y.TAKAYAMA,M.MIZUGUCHI,Y.NABESHIMA,K.KUSAKA JRNL TITL SIRT5 MUTANTS REVEAL THE ROLE OF CONSERVED ASPARAGINE AND JRNL TITL 2 GLUTAMINE RESIDUES IN THE NAD + -BINDING POCKET. JRNL REF FEBS LETT. V. 598 2269 2024 JRNL REFN ISSN 0014-5793 JRNL PMID 39031546 JRNL DOI 10.1002/1873-3468.14961 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0900 - 3.8056 1.00 2786 145 0.1947 0.2139 REMARK 3 2 3.8056 - 3.0209 1.00 2664 154 0.2091 0.2650 REMARK 3 3 3.0209 - 2.6392 1.00 2648 144 0.2249 0.2311 REMARK 3 4 2.6392 - 2.3979 1.00 2631 126 0.2190 0.2710 REMARK 3 5 2.3979 - 2.2261 1.00 2623 143 0.2019 0.2481 REMARK 3 6 2.2261 - 2.0948 1.00 2575 150 0.2105 0.2505 REMARK 3 7 2.0948 - 1.9899 1.00 2609 143 0.2298 0.2940 REMARK 3 8 1.9899 - 1.9033 1.00 2607 135 0.2560 0.2894 REMARK 3 9 1.9033 - 1.8300 1.00 2604 130 0.2839 0.3258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2129 REMARK 3 ANGLE : 0.896 2893 REMARK 3 CHIRALITY : 0.077 316 REMARK 3 PLANARITY : 0.006 378 REMARK 3 DIHEDRAL : 24.539 791 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 26.8664 1.2885 62.8973 REMARK 3 T TENSOR REMARK 3 T11: 0.2265 T22: 0.2523 REMARK 3 T33: 0.2334 T12: 0.0183 REMARK 3 T13: -0.0072 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.4314 L22: 2.9818 REMARK 3 L33: 2.5219 L12: 0.3872 REMARK 3 L13: 0.0964 L23: -1.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: 0.0082 S13: -0.0262 REMARK 3 S21: -0.1034 S22: 0.1436 S23: -0.0961 REMARK 3 S31: 0.1095 S32: 0.1202 S33: -0.0826 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Z55 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300047049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25082 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 40.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 3350, 0.1M TRIS-HCL PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.96900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.96900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.09900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.67250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.09900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.67250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.96900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.09900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.67250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.96900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.09900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 36.67250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 586 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 603 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 636 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 HIS A 32 REMARK 465 HIS A 33 REMARK 465 HIS A 34 REMARK 465 HIS A 35 REMARK 465 SER B 116 REMARK 465 LYS B 117 REMARK 465 GLU B 118 REMARK 465 TYR B 119 REMARK 465 PHE B 120 REMARK 465 LYS B 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 TYR A 255 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 259 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 78 -63.43 -19.57 REMARK 500 CYS A 212 -68.96 -95.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TRP A 77 ARG A 78 -127.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 166 SG REMARK 620 2 CYS A 169 SG 110.3 REMARK 620 3 CYS A 207 SG 106.4 108.2 REMARK 620 4 CYS A 212 SG 102.2 115.8 113.4 REMARK 620 N 1 2 3 DBREF 8Z55 A 36 302 UNP Q9NXA8 SIR5_HUMAN 36 302 DBREF 8Z55 B 116 124 UNP Q06830 PRDX1_HUMAN 191 199 SEQADV 8Z55 MET A 29 UNP Q9NXA8 INITIATING METHIONINE SEQADV 8Z55 HIS A 30 UNP Q9NXA8 EXPRESSION TAG SEQADV 8Z55 HIS A 31 UNP Q9NXA8 EXPRESSION TAG SEQADV 8Z55 HIS A 32 UNP Q9NXA8 EXPRESSION TAG SEQADV 8Z55 HIS A 33 UNP Q9NXA8 EXPRESSION TAG SEQADV 8Z55 HIS A 34 UNP Q9NXA8 EXPRESSION TAG SEQADV 8Z55 HIS A 35 UNP Q9NXA8 EXPRESSION TAG SEQRES 1 A 274 MET HIS HIS HIS HIS HIS HIS PRO SER SER SER MET ALA SEQRES 2 A 274 ASP PHE ARG LYS PHE PHE ALA LYS ALA LYS HIS ILE VAL SEQRES 3 A 274 ILE ILE SER GLY ALA GLY VAL SER ALA GLU SER GLY VAL SEQRES 4 A 274 PRO THR PHE ARG GLY ALA GLY GLY TYR TRP ARG LYS TRP SEQRES 5 A 274 GLN ALA GLN ASP LEU ALA THR PRO LEU ALA PHE ALA HIS SEQRES 6 A 274 ASN PRO SER ARG VAL TRP GLU PHE TYR HIS TYR ARG ARG SEQRES 7 A 274 GLU VAL MET GLY SER LYS GLU PRO ASN ALA GLY HIS ARG SEQRES 8 A 274 ALA ILE ALA GLU CYS GLU THR ARG LEU GLY LYS GLN GLY SEQRES 9 A 274 ARG ARG VAL VAL VAL ILE THR GLN ASN ILE ASP GLU LEU SEQRES 10 A 274 HIS ARG LYS ALA GLY THR LYS ASN LEU LEU GLU ILE HIS SEQRES 11 A 274 GLY SER LEU PHE LYS THR ARG CYS THR SER CYS GLY VAL SEQRES 12 A 274 VAL ALA GLU ASN TYR LYS SER PRO ILE CYS PRO ALA LEU SEQRES 13 A 274 SER GLY LYS GLY ALA PRO GLU PRO GLY THR GLN ASP ALA SEQRES 14 A 274 SER ILE PRO VAL GLU LYS LEU PRO ARG CYS GLU GLU ALA SEQRES 15 A 274 GLY CYS GLY GLY LEU LEU ARG PRO HIS VAL VAL TRP PHE SEQRES 16 A 274 GLY GLU ASN LEU ASP PRO ALA ILE LEU GLU GLU VAL ASP SEQRES 17 A 274 ARG GLU LEU ALA HIS CYS ASP LEU CYS LEU VAL VAL GLY SEQRES 18 A 274 THR SER SER VAL VAL TYR PRO ALA ALA MET PHE ALA PRO SEQRES 19 A 274 GLN VAL ALA ALA ARG GLY VAL PRO VAL ALA GLU PHE ASN SEQRES 20 A 274 THR GLU THR THR PRO ALA THR ASN ARG PHE ARG PHE HIS SEQRES 21 A 274 PHE GLN GLY PRO CYS GLY THR THR LEU PRO GLU ALA LEU SEQRES 22 A 274 ALA SEQRES 1 B 9 SER LYS GLU TYR PHE SER SLL GLN LYS MODRES 8Z55 SLL B 122 LYS MODIFIED RESIDUE HET SLL B 122 16 HET ADP A 401 27 HET ZN A 402 1 HETNAM SLL (2S)-2-AZANYL-6-[(4-HYDROXY-4-OXO-BUTANOYL) HETNAM 2 SLL AMINO]HEXANOIC ACID HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ZN ZINC ION HETSYN SLL 6-N-SUCCINYL-L-LYSINE FORMUL 2 SLL C10 H18 N2 O5 FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *155(H2 O) HELIX 1 AA1 SER A 39 ALA A 50 1 12 HELIX 2 AA2 GLY A 58 GLU A 64 1 7 HELIX 3 AA3 GLN A 81 ALA A 86 1 6 HELIX 4 AA4 THR A 87 ASN A 94 1 8 HELIX 5 AA5 ASN A 94 MET A 109 1 16 HELIX 6 AA6 GLY A 110 LYS A 112 5 3 HELIX 7 AA7 ASN A 115 GLN A 131 1 17 HELIX 8 AA8 GLU A 144 GLY A 150 1 7 HELIX 9 AA9 CYS A 181 SER A 185 5 5 HELIX 10 AB1 PRO A 200 LEU A 204 5 5 HELIX 11 AB2 ASP A 228 CYS A 242 1 15 HELIX 12 AB3 PHE A 260 ARG A 267 1 8 HELIX 13 AB4 ALA A 281 PHE A 285 5 5 HELIX 14 AB5 PRO A 292 LEU A 301 1 10 SHEET 1 AA1 6 LEU A 154 GLU A 156 0 SHEET 2 AA1 6 ARG A 134 THR A 139 1 N VAL A 137 O LEU A 155 SHEET 3 AA1 6 HIS A 52 SER A 57 1 N ILE A 55 O ILE A 138 SHEET 4 AA1 6 LEU A 244 VAL A 248 1 O VAL A 248 N ILE A 56 SHEET 5 AA1 6 VAL A 271 ASN A 275 1 O PHE A 274 N VAL A 247 SHEET 6 AA1 6 PHE A 287 GLN A 290 1 O PHE A 289 N GLU A 273 SHEET 1 AA2 3 VAL A 172 GLU A 174 0 SHEET 2 AA2 3 GLY A 159 CYS A 166 -1 N THR A 164 O ALA A 173 SHEET 3 AA2 3 LEU A 216 VAL A 220 -1 O ARG A 217 N ARG A 165 LINK C SER B 121 N SLL B 122 1555 1555 1.34 LINK C SLL B 122 N GLN B 123 1555 1555 1.33 LINK SG CYS A 166 ZN ZN A 402 1555 1555 2.33 LINK SG CYS A 169 ZN ZN A 402 1555 1555 2.30 LINK SG CYS A 207 ZN ZN A 402 1555 1555 2.34 LINK SG CYS A 212 ZN ZN A 402 1555 1555 2.21 CISPEP 1 GLY A 72 ALA A 73 0 -4.00 CISPEP 2 SER A 178 PRO A 179 0 -5.81 CISPEP 3 TYR A 255 PRO A 256 0 -5.73 CRYST1 46.198 73.345 163.938 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021646 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006100 0.00000