data_8ZC5 # _entry.id 8ZC5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ZC5 pdb_00008zc5 10.2210/pdb8zc5/pdb WWPDB D_1300047399 ? ? EMDB EMD-39923 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-15 2 'Structure model' 1 1 2024-06-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ZC5 _pdbx_database_status.recvd_initial_deposition_date 2024-04-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region' _pdbx_database_related.db_id EMD-39923 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email xiong_xiaoli@gibh.ac.cn _pdbx_contact_author.name_first Xiaoli _pdbx_contact_author.name_last Xiong _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4632-9122 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, B.' 1 ? 'Gao, X.' 2 ? 'Li, Z.' 3 ? 'Chen, Q.' 4 ? 'He, J.' 5 ? 'Xiong, X.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 114265 _citation.page_last 114265 _citation.title 'An unconventional VH1-2 antibody tolerates escape mutations and shows an antigenic hotspot on SARS-CoV-2 spike.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2024.114265 _citation.pdbx_database_id_PubMed 38805396 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, B.' 1 ? primary 'Niu, X.' 2 ? primary 'Deng, Y.' 3 ? primary 'Zhang, Z.' 4 ? primary 'Wang, Y.' 5 ? primary 'Gao, X.' 6 ? primary 'Liang, H.' 7 ? primary 'Li, Z.' 8 ? primary 'Wang, Q.' 9 ? primary 'Cheng, Y.' 10 ? primary 'Chen, Q.' 11 ? primary 'Huang, S.' 12 ? primary 'Pan, Y.' 13 ? primary 'Su, M.' 14 ? primary 'Lin, X.' 15 ? primary 'Niu, C.' 16 ? primary 'Chen, Y.' 17 ? primary 'Yang, W.' 18 ? primary 'Zhang, Y.' 19 ? primary 'Yan, Q.' 20 ? primary 'He, J.' 21 ? primary 'Zhao, J.' 22 ? primary 'Chen, L.' 23 ? primary 'Xiong, X.' 24 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 22119.957 2 ? ? RBD ? 2 polymer man 'Light chain of D1F6 Fab' 11622.844 2 ? ? ? ? 3 polymer man 'Heavy chain of D1F6 Fab' 14184.780 2 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIA PGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFP LQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; ;ITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIA PGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFP LQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; A,B ? 2 'polypeptide(L)' no no ;QPVLTQPPSASGPPGQSVSISCSGSRSNIGTNFVYWYQQLPGAAPKLLIYKNDQRPSGVPERFFGSKSGTSASLAISGLR SEDEVDYYCAAWDDSLSGHVFGAGTKVTVL ; ;QPVLTQPPSASGPPGQSVSISCSGSRSNIGTNFVYWYQQLPGAAPKLLIYKNDQRPSGVPERFFGSKSGTSASLAISGLR SEDEVDYYCAAWDDSLSGHVFGAGTKVTVL ; C,D ? 3 'polypeptide(L)' no no ;EVQLVQSGAEVKKPGASVKVSCKASGYIFSDYNIHWVRQAPGQGLEWMGWISPDSDDTNYAQSFQGRVTMTRDTSITTVY MELSSLRSDDTAVYFCARSVGYCSLNSCQRWMWFDTWGQGALVTVSS ; ;EVQLVQSGAEVKKPGASVKVSCKASGYIFSDYNIHWVRQAPGQGLEWMGWISPDSDDTNYAQSFQGRVTMTRDTSITTVY MELSSLRSDDTAVYFCARSVGYCSLNSCQRWMWFDTWGQGALVTVSS ; E,F ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 THR n 1 3 ASN n 1 4 LEU n 1 5 CYS n 1 6 PRO n 1 7 PHE n 1 8 ASP n 1 9 GLU n 1 10 VAL n 1 11 PHE n 1 12 ASN n 1 13 ALA n 1 14 THR n 1 15 ARG n 1 16 PHE n 1 17 ALA n 1 18 SER n 1 19 VAL n 1 20 TYR n 1 21 ALA n 1 22 TRP n 1 23 ASN n 1 24 ARG n 1 25 LYS n 1 26 ARG n 1 27 ILE n 1 28 SER n 1 29 ASN n 1 30 CYS n 1 31 VAL n 1 32 ALA n 1 33 ASP n 1 34 TYR n 1 35 SER n 1 36 VAL n 1 37 LEU n 1 38 TYR n 1 39 ASN n 1 40 PHE n 1 41 ALA n 1 42 PRO n 1 43 PHE n 1 44 PHE n 1 45 ALA n 1 46 PHE n 1 47 LYS n 1 48 CYS n 1 49 TYR n 1 50 GLY n 1 51 VAL n 1 52 SER n 1 53 PRO n 1 54 THR n 1 55 LYS n 1 56 LEU n 1 57 ASN n 1 58 ASP n 1 59 LEU n 1 60 CYS n 1 61 PHE n 1 62 THR n 1 63 ASN n 1 64 VAL n 1 65 TYR n 1 66 ALA n 1 67 ASP n 1 68 SER n 1 69 PHE n 1 70 VAL n 1 71 ILE n 1 72 ARG n 1 73 GLY n 1 74 ASN n 1 75 GLU n 1 76 VAL n 1 77 SER n 1 78 GLN n 1 79 ILE n 1 80 ALA n 1 81 PRO n 1 82 GLY n 1 83 GLN n 1 84 THR n 1 85 GLY n 1 86 ASN n 1 87 ILE n 1 88 ALA n 1 89 ASP n 1 90 TYR n 1 91 ASN n 1 92 TYR n 1 93 LYS n 1 94 LEU n 1 95 PRO n 1 96 ASP n 1 97 ASP n 1 98 PHE n 1 99 THR n 1 100 GLY n 1 101 CYS n 1 102 VAL n 1 103 ILE n 1 104 ALA n 1 105 TRP n 1 106 ASN n 1 107 SER n 1 108 ASN n 1 109 LYS n 1 110 LEU n 1 111 ASP n 1 112 SER n 1 113 LYS n 1 114 VAL n 1 115 GLY n 1 116 GLY n 1 117 ASN n 1 118 TYR n 1 119 ASN n 1 120 TYR n 1 121 ARG n 1 122 TYR n 1 123 ARG n 1 124 LEU n 1 125 PHE n 1 126 ARG n 1 127 LYS n 1 128 SER n 1 129 ASN n 1 130 LEU n 1 131 LYS n 1 132 PRO n 1 133 PHE n 1 134 GLU n 1 135 ARG n 1 136 ASP n 1 137 ILE n 1 138 SER n 1 139 THR n 1 140 GLU n 1 141 ILE n 1 142 TYR n 1 143 GLN n 1 144 ALA n 1 145 GLY n 1 146 ASN n 1 147 LYS n 1 148 PRO n 1 149 CYS n 1 150 ASN n 1 151 GLY n 1 152 VAL n 1 153 ALA n 1 154 GLY n 1 155 VAL n 1 156 ASN n 1 157 CYS n 1 158 TYR n 1 159 PHE n 1 160 PRO n 1 161 LEU n 1 162 GLN n 1 163 SER n 1 164 TYR n 1 165 GLY n 1 166 PHE n 1 167 ARG n 1 168 PRO n 1 169 THR n 1 170 TYR n 1 171 GLY n 1 172 VAL n 1 173 GLY n 1 174 HIS n 1 175 GLN n 1 176 PRO n 1 177 TYR n 1 178 ARG n 1 179 VAL n 1 180 VAL n 1 181 VAL n 1 182 LEU n 1 183 SER n 1 184 PHE n 1 185 GLU n 1 186 LEU n 1 187 LEU n 1 188 HIS n 1 189 ALA n 1 190 PRO n 1 191 ALA n 1 192 THR n 1 193 VAL n 1 194 CYS n 1 195 GLY n 1 196 PRO n 2 1 GLN n 2 2 PRO n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 PRO n 2 8 PRO n 2 9 SER n 2 10 ALA n 2 11 SER n 2 12 GLY n 2 13 PRO n 2 14 PRO n 2 15 GLY n 2 16 GLN n 2 17 SER n 2 18 VAL n 2 19 SER n 2 20 ILE n 2 21 SER n 2 22 CYS n 2 23 SER n 2 24 GLY n 2 25 SER n 2 26 ARG n 2 27 SER n 2 28 ASN n 2 29 ILE n 2 30 GLY n 2 31 THR n 2 32 ASN n 2 33 PHE n 2 34 VAL n 2 35 TYR n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 LEU n 2 41 PRO n 2 42 GLY n 2 43 ALA n 2 44 ALA n 2 45 PRO n 2 46 LYS n 2 47 LEU n 2 48 LEU n 2 49 ILE n 2 50 TYR n 2 51 LYS n 2 52 ASN n 2 53 ASP n 2 54 GLN n 2 55 ARG n 2 56 PRO n 2 57 SER n 2 58 GLY n 2 59 VAL n 2 60 PRO n 2 61 GLU n 2 62 ARG n 2 63 PHE n 2 64 PHE n 2 65 GLY n 2 66 SER n 2 67 LYS n 2 68 SER n 2 69 GLY n 2 70 THR n 2 71 SER n 2 72 ALA n 2 73 SER n 2 74 LEU n 2 75 ALA n 2 76 ILE n 2 77 SER n 2 78 GLY n 2 79 LEU n 2 80 ARG n 2 81 SER n 2 82 GLU n 2 83 ASP n 2 84 GLU n 2 85 VAL n 2 86 ASP n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 ALA n 2 91 ALA n 2 92 TRP n 2 93 ASP n 2 94 ASP n 2 95 SER n 2 96 LEU n 2 97 SER n 2 98 GLY n 2 99 HIS n 2 100 VAL n 2 101 PHE n 2 102 GLY n 2 103 ALA n 2 104 GLY n 2 105 THR n 2 106 LYS n 2 107 VAL n 2 108 THR n 2 109 VAL n 2 110 LEU n 3 1 GLU n 3 2 VAL n 3 3 GLN n 3 4 LEU n 3 5 VAL n 3 6 GLN n 3 7 SER n 3 8 GLY n 3 9 ALA n 3 10 GLU n 3 11 VAL n 3 12 LYS n 3 13 LYS n 3 14 PRO n 3 15 GLY n 3 16 ALA n 3 17 SER n 3 18 VAL n 3 19 LYS n 3 20 VAL n 3 21 SER n 3 22 CYS n 3 23 LYS n 3 24 ALA n 3 25 SER n 3 26 GLY n 3 27 TYR n 3 28 ILE n 3 29 PHE n 3 30 SER n 3 31 ASP n 3 32 TYR n 3 33 ASN n 3 34 ILE n 3 35 HIS n 3 36 TRP n 3 37 VAL n 3 38 ARG n 3 39 GLN n 3 40 ALA n 3 41 PRO n 3 42 GLY n 3 43 GLN n 3 44 GLY n 3 45 LEU n 3 46 GLU n 3 47 TRP n 3 48 MET n 3 49 GLY n 3 50 TRP n 3 51 ILE n 3 52 SER n 3 53 PRO n 3 54 ASP n 3 55 SER n 3 56 ASP n 3 57 ASP n 3 58 THR n 3 59 ASN n 3 60 TYR n 3 61 ALA n 3 62 GLN n 3 63 SER n 3 64 PHE n 3 65 GLN n 3 66 GLY n 3 67 ARG n 3 68 VAL n 3 69 THR n 3 70 MET n 3 71 THR n 3 72 ARG n 3 73 ASP n 3 74 THR n 3 75 SER n 3 76 ILE n 3 77 THR n 3 78 THR n 3 79 VAL n 3 80 TYR n 3 81 MET n 3 82 GLU n 3 83 LEU n 3 84 SER n 3 85 SER n 3 86 LEU n 3 87 ARG n 3 88 SER n 3 89 ASP n 3 90 ASP n 3 91 THR n 3 92 ALA n 3 93 VAL n 3 94 TYR n 3 95 PHE n 3 96 CYS n 3 97 ALA n 3 98 ARG n 3 99 SER n 3 100 VAL n 3 101 GLY n 3 102 TYR n 3 103 CYS n 3 104 SER n 3 105 LEU n 3 106 ASN n 3 107 SER n 3 108 CYS n 3 109 GLN n 3 110 ARG n 3 111 TRP n 3 112 MET n 3 113 TRP n 3 114 PHE n 3 115 ASP n 3 116 THR n 3 117 TRP n 3 118 GLY n 3 119 GLN n 3 120 GLY n 3 121 ALA n 3 122 LEU n 3 123 VAL n 3 124 THR n 3 125 VAL n 3 126 SER n 3 127 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 196 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? Omicron/BA.4 ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 110 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 127 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 332 332 ILE ILE A . n A 1 2 THR 2 333 333 THR THR A . n A 1 3 ASN 3 334 334 ASN ASN A . n A 1 4 LEU 4 335 335 LEU LEU A . n A 1 5 CYS 5 336 336 CYS CYS A . n A 1 6 PRO 6 337 337 PRO PRO A . n A 1 7 PHE 7 338 338 PHE PHE A . n A 1 8 ASP 8 339 339 ASP ASP A . n A 1 9 GLU 9 340 340 GLU GLU A . n A 1 10 VAL 10 341 341 VAL VAL A . n A 1 11 PHE 11 342 342 PHE PHE A . n A 1 12 ASN 12 343 343 ASN ASN A . n A 1 13 ALA 13 344 344 ALA ALA A . n A 1 14 THR 14 345 345 THR THR A . n A 1 15 ARG 15 346 346 ARG ARG A . n A 1 16 PHE 16 347 347 PHE PHE A . n A 1 17 ALA 17 348 348 ALA ALA A . n A 1 18 SER 18 349 349 SER SER A . n A 1 19 VAL 19 350 350 VAL VAL A . n A 1 20 TYR 20 351 351 TYR TYR A . n A 1 21 ALA 21 352 352 ALA ALA A . n A 1 22 TRP 22 353 353 TRP TRP A . n A 1 23 ASN 23 354 354 ASN ASN A . n A 1 24 ARG 24 355 355 ARG ARG A . n A 1 25 LYS 25 356 356 LYS LYS A . n A 1 26 ARG 26 357 357 ARG ARG A . n A 1 27 ILE 27 358 358 ILE ILE A . n A 1 28 SER 28 359 359 SER SER A . n A 1 29 ASN 29 360 360 ASN ASN A . n A 1 30 CYS 30 361 361 CYS CYS A . n A 1 31 VAL 31 362 362 VAL VAL A . n A 1 32 ALA 32 363 363 ALA ALA A . n A 1 33 ASP 33 364 364 ASP ASP A . n A 1 34 TYR 34 365 365 TYR TYR A . n A 1 35 SER 35 366 366 SER SER A . n A 1 36 VAL 36 367 367 VAL VAL A . n A 1 37 LEU 37 368 368 LEU LEU A . n A 1 38 TYR 38 369 369 TYR TYR A . n A 1 39 ASN 39 370 370 ASN ASN A . n A 1 40 PHE 40 371 371 PHE PHE A . n A 1 41 ALA 41 372 372 ALA ALA A . n A 1 42 PRO 42 373 373 PRO PRO A . n A 1 43 PHE 43 374 374 PHE PHE A . n A 1 44 PHE 44 375 375 PHE PHE A . n A 1 45 ALA 45 376 376 ALA ALA A . n A 1 46 PHE 46 377 377 PHE PHE A . n A 1 47 LYS 47 378 378 LYS LYS A . n A 1 48 CYS 48 379 379 CYS CYS A . n A 1 49 TYR 49 380 380 TYR TYR A . n A 1 50 GLY 50 381 381 GLY GLY A . n A 1 51 VAL 51 382 382 VAL VAL A . n A 1 52 SER 52 383 383 SER SER A . n A 1 53 PRO 53 384 384 PRO PRO A . n A 1 54 THR 54 385 385 THR THR A . n A 1 55 LYS 55 386 386 LYS LYS A . n A 1 56 LEU 56 387 387 LEU LEU A . n A 1 57 ASN 57 388 388 ASN ASN A . n A 1 58 ASP 58 389 389 ASP ASP A . n A 1 59 LEU 59 390 390 LEU LEU A . n A 1 60 CYS 60 391 391 CYS CYS A . n A 1 61 PHE 61 392 392 PHE PHE A . n A 1 62 THR 62 393 393 THR THR A . n A 1 63 ASN 63 394 394 ASN ASN A . n A 1 64 VAL 64 395 395 VAL VAL A . n A 1 65 TYR 65 396 396 TYR TYR A . n A 1 66 ALA 66 397 397 ALA ALA A . n A 1 67 ASP 67 398 398 ASP ASP A . n A 1 68 SER 68 399 399 SER SER A . n A 1 69 PHE 69 400 400 PHE PHE A . n A 1 70 VAL 70 401 401 VAL VAL A . n A 1 71 ILE 71 402 402 ILE ILE A . n A 1 72 ARG 72 403 403 ARG ARG A . n A 1 73 GLY 73 404 404 GLY GLY A . n A 1 74 ASN 74 405 405 ASN ASN A . n A 1 75 GLU 75 406 406 GLU GLU A . n A 1 76 VAL 76 407 407 VAL VAL A . n A 1 77 SER 77 408 408 SER SER A . n A 1 78 GLN 78 409 409 GLN GLN A . n A 1 79 ILE 79 410 410 ILE ILE A . n A 1 80 ALA 80 411 411 ALA ALA A . n A 1 81 PRO 81 412 412 PRO PRO A . n A 1 82 GLY 82 413 413 GLY GLY A . n A 1 83 GLN 83 414 414 GLN GLN A . n A 1 84 THR 84 415 415 THR THR A . n A 1 85 GLY 85 416 416 GLY GLY A . n A 1 86 ASN 86 417 417 ASN ASN A . n A 1 87 ILE 87 418 418 ILE ILE A . n A 1 88 ALA 88 419 419 ALA ALA A . n A 1 89 ASP 89 420 420 ASP ASP A . n A 1 90 TYR 90 421 421 TYR TYR A . n A 1 91 ASN 91 422 422 ASN ASN A . n A 1 92 TYR 92 423 423 TYR TYR A . n A 1 93 LYS 93 424 424 LYS LYS A . n A 1 94 LEU 94 425 425 LEU LEU A . n A 1 95 PRO 95 426 426 PRO PRO A . n A 1 96 ASP 96 427 427 ASP ASP A . n A 1 97 ASP 97 428 428 ASP ASP A . n A 1 98 PHE 98 429 429 PHE PHE A . n A 1 99 THR 99 430 430 THR THR A . n A 1 100 GLY 100 431 431 GLY GLY A . n A 1 101 CYS 101 432 432 CYS CYS A . n A 1 102 VAL 102 433 433 VAL VAL A . n A 1 103 ILE 103 434 434 ILE ILE A . n A 1 104 ALA 104 435 435 ALA ALA A . n A 1 105 TRP 105 436 436 TRP TRP A . n A 1 106 ASN 106 437 437 ASN ASN A . n A 1 107 SER 107 438 438 SER SER A . n A 1 108 ASN 108 439 439 ASN ASN A . n A 1 109 LYS 109 440 440 LYS LYS A . n A 1 110 LEU 110 441 441 LEU LEU A . n A 1 111 ASP 111 442 442 ASP ASP A . n A 1 112 SER 112 443 443 SER SER A . n A 1 113 LYS 113 444 444 LYS LYS A . n A 1 114 VAL 114 445 445 VAL VAL A . n A 1 115 GLY 115 446 446 GLY GLY A . n A 1 116 GLY 116 447 447 GLY GLY A . n A 1 117 ASN 117 448 448 ASN ASN A . n A 1 118 TYR 118 449 449 TYR TYR A . n A 1 119 ASN 119 450 450 ASN ASN A . n A 1 120 TYR 120 451 451 TYR TYR A . n A 1 121 ARG 121 452 452 ARG ARG A . n A 1 122 TYR 122 453 453 TYR TYR A . n A 1 123 ARG 123 454 454 ARG ARG A . n A 1 124 LEU 124 455 455 LEU LEU A . n A 1 125 PHE 125 456 456 PHE PHE A . n A 1 126 ARG 126 457 457 ARG ARG A . n A 1 127 LYS 127 458 458 LYS LYS A . n A 1 128 SER 128 459 459 SER SER A . n A 1 129 ASN 129 460 460 ASN ASN A . n A 1 130 LEU 130 461 461 LEU LEU A . n A 1 131 LYS 131 462 462 LYS LYS A . n A 1 132 PRO 132 463 463 PRO PRO A . n A 1 133 PHE 133 464 464 PHE PHE A . n A 1 134 GLU 134 465 465 GLU GLU A . n A 1 135 ARG 135 466 466 ARG ARG A . n A 1 136 ASP 136 467 467 ASP ASP A . n A 1 137 ILE 137 468 468 ILE ILE A . n A 1 138 SER 138 469 469 SER SER A . n A 1 139 THR 139 470 470 THR THR A . n A 1 140 GLU 140 471 471 GLU GLU A . n A 1 141 ILE 141 472 472 ILE ILE A . n A 1 142 TYR 142 473 473 TYR TYR A . n A 1 143 GLN 143 474 474 GLN GLN A . n A 1 144 ALA 144 475 475 ALA ALA A . n A 1 145 GLY 145 476 476 GLY GLY A . n A 1 146 ASN 146 477 477 ASN ASN A . n A 1 147 LYS 147 478 478 LYS LYS A . n A 1 148 PRO 148 479 479 PRO PRO A . n A 1 149 CYS 149 480 480 CYS CYS A . n A 1 150 ASN 150 481 481 ASN ASN A . n A 1 151 GLY 151 482 482 GLY GLY A . n A 1 152 VAL 152 483 483 VAL VAL A . n A 1 153 ALA 153 484 484 ALA ALA A . n A 1 154 GLY 154 485 485 GLY GLY A . n A 1 155 VAL 155 486 486 VAL VAL A . n A 1 156 ASN 156 487 487 ASN ASN A . n A 1 157 CYS 157 488 488 CYS CYS A . n A 1 158 TYR 158 489 489 TYR TYR A . n A 1 159 PHE 159 490 490 PHE PHE A . n A 1 160 PRO 160 491 491 PRO PRO A . n A 1 161 LEU 161 492 492 LEU LEU A . n A 1 162 GLN 162 493 493 GLN GLN A . n A 1 163 SER 163 494 494 SER SER A . n A 1 164 TYR 164 495 495 TYR TYR A . n A 1 165 GLY 165 496 496 GLY GLY A . n A 1 166 PHE 166 497 497 PHE PHE A . n A 1 167 ARG 167 498 498 ARG ARG A . n A 1 168 PRO 168 499 499 PRO PRO A . n A 1 169 THR 169 500 500 THR THR A . n A 1 170 TYR 170 501 501 TYR TYR A . n A 1 171 GLY 171 502 502 GLY GLY A . n A 1 172 VAL 172 503 503 VAL VAL A . n A 1 173 GLY 173 504 504 GLY GLY A . n A 1 174 HIS 174 505 505 HIS HIS A . n A 1 175 GLN 175 506 506 GLN GLN A . n A 1 176 PRO 176 507 507 PRO PRO A . n A 1 177 TYR 177 508 508 TYR TYR A . n A 1 178 ARG 178 509 509 ARG ARG A . n A 1 179 VAL 179 510 510 VAL VAL A . n A 1 180 VAL 180 511 511 VAL VAL A . n A 1 181 VAL 181 512 512 VAL VAL A . n A 1 182 LEU 182 513 513 LEU LEU A . n A 1 183 SER 183 514 514 SER SER A . n A 1 184 PHE 184 515 515 PHE PHE A . n A 1 185 GLU 185 516 516 GLU GLU A . n A 1 186 LEU 186 517 517 LEU LEU A . n A 1 187 LEU 187 518 518 LEU LEU A . n A 1 188 HIS 188 519 519 HIS HIS A . n A 1 189 ALA 189 520 520 ALA ALA A . n A 1 190 PRO 190 521 521 PRO PRO A . n A 1 191 ALA 191 522 522 ALA ALA A . n A 1 192 THR 192 523 523 THR THR A . n A 1 193 VAL 193 524 524 VAL VAL A . n A 1 194 CYS 194 525 525 CYS CYS A . n A 1 195 GLY 195 526 526 GLY GLY A . n A 1 196 PRO 196 527 527 PRO PRO A . n B 1 1 ILE 1 332 ? ? ? B . n B 1 2 THR 2 333 ? ? ? B . n B 1 3 ASN 3 334 ? ? ? B . n B 1 4 LEU 4 335 ? ? ? B . n B 1 5 CYS 5 336 ? ? ? B . n B 1 6 PRO 6 337 ? ? ? B . n B 1 7 PHE 7 338 338 PHE PHE B . n B 1 8 ASP 8 339 339 ASP ASP B . n B 1 9 GLU 9 340 340 GLU GLU B . n B 1 10 VAL 10 341 341 VAL VAL B . n B 1 11 PHE 11 342 342 PHE PHE B . n B 1 12 ASN 12 343 343 ASN ASN B . n B 1 13 ALA 13 344 344 ALA ALA B . n B 1 14 THR 14 345 345 THR THR B . n B 1 15 ARG 15 346 346 ARG ARG B . n B 1 16 PHE 16 347 347 PHE PHE B . n B 1 17 ALA 17 348 348 ALA ALA B . n B 1 18 SER 18 349 349 SER SER B . n B 1 19 VAL 19 350 350 VAL VAL B . n B 1 20 TYR 20 351 351 TYR TYR B . n B 1 21 ALA 21 352 352 ALA ALA B . n B 1 22 TRP 22 353 353 TRP TRP B . n B 1 23 ASN 23 354 354 ASN ASN B . n B 1 24 ARG 24 355 355 ARG ARG B . n B 1 25 LYS 25 356 356 LYS LYS B . n B 1 26 ARG 26 357 357 ARG ARG B . n B 1 27 ILE 27 358 358 ILE ILE B . n B 1 28 SER 28 359 ? ? ? B . n B 1 29 ASN 29 360 ? ? ? B . n B 1 30 CYS 30 361 ? ? ? B . n B 1 31 VAL 31 362 ? ? ? B . n B 1 32 ALA 32 363 ? ? ? B . n B 1 33 ASP 33 364 ? ? ? B . n B 1 34 TYR 34 365 ? ? ? B . n B 1 35 SER 35 366 366 SER SER B . n B 1 36 VAL 36 367 367 VAL VAL B . n B 1 37 LEU 37 368 368 LEU LEU B . n B 1 38 TYR 38 369 369 TYR TYR B . n B 1 39 ASN 39 370 370 ASN ASN B . n B 1 40 PHE 40 371 371 PHE PHE B . n B 1 41 ALA 41 372 372 ALA ALA B . n B 1 42 PRO 42 373 373 PRO PRO B . n B 1 43 PHE 43 374 374 PHE PHE B . n B 1 44 PHE 44 375 375 PHE PHE B . n B 1 45 ALA 45 376 376 ALA ALA B . n B 1 46 PHE 46 377 377 PHE PHE B . n B 1 47 LYS 47 378 378 LYS LYS B . n B 1 48 CYS 48 379 379 CYS CYS B . n B 1 49 TYR 49 380 380 TYR TYR B . n B 1 50 GLY 50 381 381 GLY GLY B . n B 1 51 VAL 51 382 382 VAL VAL B . n B 1 52 SER 52 383 383 SER SER B . n B 1 53 PRO 53 384 384 PRO PRO B . n B 1 54 THR 54 385 385 THR THR B . n B 1 55 LYS 55 386 386 LYS LYS B . n B 1 56 LEU 56 387 387 LEU LEU B . n B 1 57 ASN 57 388 388 ASN ASN B . n B 1 58 ASP 58 389 389 ASP ASP B . n B 1 59 LEU 59 390 390 LEU LEU B . n B 1 60 CYS 60 391 ? ? ? B . n B 1 61 PHE 61 392 ? ? ? B . n B 1 62 THR 62 393 ? ? ? B . n B 1 63 ASN 63 394 394 ASN ASN B . n B 1 64 VAL 64 395 395 VAL VAL B . n B 1 65 TYR 65 396 396 TYR TYR B . n B 1 66 ALA 66 397 397 ALA ALA B . n B 1 67 ASP 67 398 398 ASP ASP B . n B 1 68 SER 68 399 399 SER SER B . n B 1 69 PHE 69 400 400 PHE PHE B . n B 1 70 VAL 70 401 401 VAL VAL B . n B 1 71 ILE 71 402 402 ILE ILE B . n B 1 72 ARG 72 403 403 ARG ARG B . n B 1 73 GLY 73 404 404 GLY GLY B . n B 1 74 ASN 74 405 405 ASN ASN B . n B 1 75 GLU 75 406 406 GLU GLU B . n B 1 76 VAL 76 407 407 VAL VAL B . n B 1 77 SER 77 408 408 SER SER B . n B 1 78 GLN 78 409 409 GLN GLN B . n B 1 79 ILE 79 410 410 ILE ILE B . n B 1 80 ALA 80 411 411 ALA ALA B . n B 1 81 PRO 81 412 412 PRO PRO B . n B 1 82 GLY 82 413 413 GLY GLY B . n B 1 83 GLN 83 414 414 GLN GLN B . n B 1 84 THR 84 415 415 THR THR B . n B 1 85 GLY 85 416 416 GLY GLY B . n B 1 86 ASN 86 417 417 ASN ASN B . n B 1 87 ILE 87 418 418 ILE ILE B . n B 1 88 ALA 88 419 419 ALA ALA B . n B 1 89 ASP 89 420 420 ASP ASP B . n B 1 90 TYR 90 421 421 TYR TYR B . n B 1 91 ASN 91 422 422 ASN ASN B . n B 1 92 TYR 92 423 423 TYR TYR B . n B 1 93 LYS 93 424 424 LYS LYS B . n B 1 94 LEU 94 425 425 LEU LEU B . n B 1 95 PRO 95 426 426 PRO PRO B . n B 1 96 ASP 96 427 427 ASP ASP B . n B 1 97 ASP 97 428 428 ASP ASP B . n B 1 98 PHE 98 429 429 PHE PHE B . n B 1 99 THR 99 430 430 THR THR B . n B 1 100 GLY 100 431 431 GLY GLY B . n B 1 101 CYS 101 432 432 CYS CYS B . n B 1 102 VAL 102 433 433 VAL VAL B . n B 1 103 ILE 103 434 434 ILE ILE B . n B 1 104 ALA 104 435 435 ALA ALA B . n B 1 105 TRP 105 436 436 TRP TRP B . n B 1 106 ASN 106 437 437 ASN ASN B . n B 1 107 SER 107 438 438 SER SER B . n B 1 108 ASN 108 439 439 ASN ASN B . n B 1 109 LYS 109 440 440 LYS LYS B . n B 1 110 LEU 110 441 441 LEU LEU B . n B 1 111 ASP 111 442 442 ASP ASP B . n B 1 112 SER 112 443 443 SER SER B . n B 1 113 LYS 113 444 444 LYS LYS B . n B 1 114 VAL 114 445 445 VAL VAL B . n B 1 115 GLY 115 446 446 GLY GLY B . n B 1 116 GLY 116 447 447 GLY GLY B . n B 1 117 ASN 117 448 448 ASN ASN B . n B 1 118 TYR 118 449 449 TYR TYR B . n B 1 119 ASN 119 450 450 ASN ASN B . n B 1 120 TYR 120 451 451 TYR TYR B . n B 1 121 ARG 121 452 452 ARG ARG B . n B 1 122 TYR 122 453 453 TYR TYR B . n B 1 123 ARG 123 454 454 ARG ARG B . n B 1 124 LEU 124 455 455 LEU LEU B . n B 1 125 PHE 125 456 456 PHE PHE B . n B 1 126 ARG 126 457 457 ARG ARG B . n B 1 127 LYS 127 458 458 LYS LYS B . n B 1 128 SER 128 459 459 SER SER B . n B 1 129 ASN 129 460 460 ASN ASN B . n B 1 130 LEU 130 461 461 LEU LEU B . n B 1 131 LYS 131 462 462 LYS LYS B . n B 1 132 PRO 132 463 463 PRO PRO B . n B 1 133 PHE 133 464 464 PHE PHE B . n B 1 134 GLU 134 465 465 GLU GLU B . n B 1 135 ARG 135 466 466 ARG ARG B . n B 1 136 ASP 136 467 467 ASP ASP B . n B 1 137 ILE 137 468 468 ILE ILE B . n B 1 138 SER 138 469 469 SER SER B . n B 1 139 THR 139 470 470 THR THR B . n B 1 140 GLU 140 471 471 GLU GLU B . n B 1 141 ILE 141 472 472 ILE ILE B . n B 1 142 TYR 142 473 473 TYR TYR B . n B 1 143 GLN 143 474 474 GLN GLN B . n B 1 144 ALA 144 475 475 ALA ALA B . n B 1 145 GLY 145 476 476 GLY GLY B . n B 1 146 ASN 146 477 477 ASN ASN B . n B 1 147 LYS 147 478 478 LYS LYS B . n B 1 148 PRO 148 479 479 PRO PRO B . n B 1 149 CYS 149 480 480 CYS CYS B . n B 1 150 ASN 150 481 481 ASN ASN B . n B 1 151 GLY 151 482 482 GLY GLY B . n B 1 152 VAL 152 483 483 VAL VAL B . n B 1 153 ALA 153 484 484 ALA ALA B . n B 1 154 GLY 154 485 485 GLY GLY B . n B 1 155 VAL 155 486 486 VAL VAL B . n B 1 156 ASN 156 487 487 ASN ASN B . n B 1 157 CYS 157 488 488 CYS CYS B . n B 1 158 TYR 158 489 489 TYR TYR B . n B 1 159 PHE 159 490 490 PHE PHE B . n B 1 160 PRO 160 491 491 PRO PRO B . n B 1 161 LEU 161 492 492 LEU LEU B . n B 1 162 GLN 162 493 493 GLN GLN B . n B 1 163 SER 163 494 494 SER SER B . n B 1 164 TYR 164 495 495 TYR TYR B . n B 1 165 GLY 165 496 496 GLY GLY B . n B 1 166 PHE 166 497 497 PHE PHE B . n B 1 167 ARG 167 498 498 ARG ARG B . n B 1 168 PRO 168 499 499 PRO PRO B . n B 1 169 THR 169 500 500 THR THR B . n B 1 170 TYR 170 501 501 TYR TYR B . n B 1 171 GLY 171 502 502 GLY GLY B . n B 1 172 VAL 172 503 503 VAL VAL B . n B 1 173 GLY 173 504 504 GLY GLY B . n B 1 174 HIS 174 505 505 HIS HIS B . n B 1 175 GLN 175 506 506 GLN GLN B . n B 1 176 PRO 176 507 507 PRO PRO B . n B 1 177 TYR 177 508 508 TYR TYR B . n B 1 178 ARG 178 509 509 ARG ARG B . n B 1 179 VAL 179 510 510 VAL VAL B . n B 1 180 VAL 180 511 511 VAL VAL B . n B 1 181 VAL 181 512 512 VAL VAL B . n B 1 182 LEU 182 513 513 LEU LEU B . n B 1 183 SER 183 514 514 SER SER B . n B 1 184 PHE 184 515 515 PHE PHE B . n B 1 185 GLU 185 516 ? ? ? B . n B 1 186 LEU 186 517 ? ? ? B . n B 1 187 LEU 187 518 ? ? ? B . n B 1 188 HIS 188 519 ? ? ? B . n B 1 189 ALA 189 520 ? ? ? B . n B 1 190 PRO 190 521 ? ? ? B . n B 1 191 ALA 191 522 ? ? ? B . n B 1 192 THR 192 523 ? ? ? B . n B 1 193 VAL 193 524 ? ? ? B . n B 1 194 CYS 194 525 ? ? ? B . n B 1 195 GLY 195 526 ? ? ? B . n B 1 196 PRO 196 527 ? ? ? B . n C 2 1 GLN 1 1 ? ? ? C . n C 2 2 PRO 2 2 2 PRO PRO C . n C 2 3 VAL 3 3 3 VAL VAL C . n C 2 4 LEU 4 4 4 LEU LEU C . n C 2 5 THR 5 5 5 THR THR C . n C 2 6 GLN 6 6 6 GLN GLN C . n C 2 7 PRO 7 7 7 PRO PRO C . n C 2 8 PRO 8 8 8 PRO PRO C . n C 2 9 SER 9 9 9 SER SER C . n C 2 10 ALA 10 10 10 ALA ALA C . n C 2 11 SER 11 11 11 SER SER C . n C 2 12 GLY 12 12 12 GLY GLY C . n C 2 13 PRO 13 13 13 PRO PRO C . n C 2 14 PRO 14 14 14 PRO PRO C . n C 2 15 GLY 15 15 15 GLY GLY C . n C 2 16 GLN 16 16 16 GLN GLN C . n C 2 17 SER 17 17 17 SER SER C . n C 2 18 VAL 18 18 18 VAL VAL C . n C 2 19 SER 19 19 19 SER SER C . n C 2 20 ILE 20 20 20 ILE ILE C . n C 2 21 SER 21 21 21 SER SER C . n C 2 22 CYS 22 22 22 CYS CYS C . n C 2 23 SER 23 23 23 SER SER C . n C 2 24 GLY 24 24 24 GLY GLY C . n C 2 25 SER 25 25 25 SER SER C . n C 2 26 ARG 26 26 26 ARG ARG C . n C 2 27 SER 27 27 27 SER SER C . n C 2 28 ASN 28 28 28 ASN ASN C . n C 2 29 ILE 29 29 29 ILE ILE C . n C 2 30 GLY 30 30 30 GLY GLY C . n C 2 31 THR 31 31 31 THR THR C . n C 2 32 ASN 32 32 32 ASN ASN C . n C 2 33 PHE 33 33 33 PHE PHE C . n C 2 34 VAL 34 34 34 VAL VAL C . n C 2 35 TYR 35 35 35 TYR TYR C . n C 2 36 TRP 36 36 36 TRP TRP C . n C 2 37 TYR 37 37 37 TYR TYR C . n C 2 38 GLN 38 38 38 GLN GLN C . n C 2 39 GLN 39 39 39 GLN GLN C . n C 2 40 LEU 40 40 40 LEU LEU C . n C 2 41 PRO 41 41 41 PRO PRO C . n C 2 42 GLY 42 42 42 GLY GLY C . n C 2 43 ALA 43 43 43 ALA ALA C . n C 2 44 ALA 44 44 44 ALA ALA C . n C 2 45 PRO 45 45 45 PRO PRO C . n C 2 46 LYS 46 46 46 LYS LYS C . n C 2 47 LEU 47 47 47 LEU LEU C . n C 2 48 LEU 48 48 48 LEU LEU C . n C 2 49 ILE 49 49 49 ILE ILE C . n C 2 50 TYR 50 50 50 TYR TYR C . n C 2 51 LYS 51 51 51 LYS LYS C . n C 2 52 ASN 52 52 52 ASN ASN C . n C 2 53 ASP 53 53 53 ASP ASP C . n C 2 54 GLN 54 54 54 GLN GLN C . n C 2 55 ARG 55 55 55 ARG ARG C . n C 2 56 PRO 56 56 56 PRO PRO C . n C 2 57 SER 57 57 57 SER SER C . n C 2 58 GLY 58 58 58 GLY GLY C . n C 2 59 VAL 59 59 59 VAL VAL C . n C 2 60 PRO 60 60 60 PRO PRO C . n C 2 61 GLU 61 61 61 GLU GLU C . n C 2 62 ARG 62 62 62 ARG ARG C . n C 2 63 PHE 63 63 63 PHE PHE C . n C 2 64 PHE 64 64 64 PHE PHE C . n C 2 65 GLY 65 65 65 GLY GLY C . n C 2 66 SER 66 66 66 SER SER C . n C 2 67 LYS 67 67 67 LYS LYS C . n C 2 68 SER 68 68 68 SER SER C . n C 2 69 GLY 69 69 69 GLY GLY C . n C 2 70 THR 70 70 70 THR THR C . n C 2 71 SER 71 71 71 SER SER C . n C 2 72 ALA 72 72 72 ALA ALA C . n C 2 73 SER 73 73 73 SER SER C . n C 2 74 LEU 74 74 74 LEU LEU C . n C 2 75 ALA 75 75 75 ALA ALA C . n C 2 76 ILE 76 76 76 ILE ILE C . n C 2 77 SER 77 77 77 SER SER C . n C 2 78 GLY 78 78 78 GLY GLY C . n C 2 79 LEU 79 79 79 LEU LEU C . n C 2 80 ARG 80 80 80 ARG ARG C . n C 2 81 SER 81 81 81 SER SER C . n C 2 82 GLU 82 82 82 GLU GLU C . n C 2 83 ASP 83 83 83 ASP ASP C . n C 2 84 GLU 84 84 84 GLU GLU C . n C 2 85 VAL 85 85 85 VAL VAL C . n C 2 86 ASP 86 86 86 ASP ASP C . n C 2 87 TYR 87 87 87 TYR TYR C . n C 2 88 TYR 88 88 88 TYR TYR C . n C 2 89 CYS 89 89 89 CYS CYS C . n C 2 90 ALA 90 90 90 ALA ALA C . n C 2 91 ALA 91 91 91 ALA ALA C . n C 2 92 TRP 92 92 92 TRP TRP C . n C 2 93 ASP 93 93 93 ASP ASP C . n C 2 94 ASP 94 94 94 ASP ASP C . n C 2 95 SER 95 95 95 SER SER C . n C 2 96 LEU 96 96 96 LEU LEU C . n C 2 97 SER 97 97 97 SER SER C . n C 2 98 GLY 98 98 98 GLY GLY C . n C 2 99 HIS 99 99 99 HIS HIS C . n C 2 100 VAL 100 100 100 VAL VAL C . n C 2 101 PHE 101 101 101 PHE PHE C . n C 2 102 GLY 102 102 102 GLY GLY C . n C 2 103 ALA 103 103 103 ALA ALA C . n C 2 104 GLY 104 104 104 GLY GLY C . n C 2 105 THR 105 105 105 THR THR C . n C 2 106 LYS 106 106 106 LYS LYS C . n C 2 107 VAL 107 107 107 VAL VAL C . n C 2 108 THR 108 108 108 THR THR C . n C 2 109 VAL 109 109 109 VAL VAL C . n C 2 110 LEU 110 110 110 LEU LEU C . n D 2 1 GLN 1 1 ? ? ? D . n D 2 2 PRO 2 2 2 PRO PRO D . n D 2 3 VAL 3 3 3 VAL VAL D . n D 2 4 LEU 4 4 4 LEU LEU D . n D 2 5 THR 5 5 5 THR THR D . n D 2 6 GLN 6 6 6 GLN GLN D . n D 2 7 PRO 7 7 7 PRO PRO D . n D 2 8 PRO 8 8 8 PRO PRO D . n D 2 9 SER 9 9 9 SER SER D . n D 2 10 ALA 10 10 10 ALA ALA D . n D 2 11 SER 11 11 11 SER SER D . n D 2 12 GLY 12 12 12 GLY GLY D . n D 2 13 PRO 13 13 13 PRO PRO D . n D 2 14 PRO 14 14 14 PRO PRO D . n D 2 15 GLY 15 15 15 GLY GLY D . n D 2 16 GLN 16 16 16 GLN GLN D . n D 2 17 SER 17 17 17 SER SER D . n D 2 18 VAL 18 18 18 VAL VAL D . n D 2 19 SER 19 19 19 SER SER D . n D 2 20 ILE 20 20 20 ILE ILE D . n D 2 21 SER 21 21 21 SER SER D . n D 2 22 CYS 22 22 22 CYS CYS D . n D 2 23 SER 23 23 23 SER SER D . n D 2 24 GLY 24 24 24 GLY GLY D . n D 2 25 SER 25 25 25 SER SER D . n D 2 26 ARG 26 26 26 ARG ARG D . n D 2 27 SER 27 27 27 SER SER D . n D 2 28 ASN 28 28 28 ASN ASN D . n D 2 29 ILE 29 29 29 ILE ILE D . n D 2 30 GLY 30 30 30 GLY GLY D . n D 2 31 THR 31 31 31 THR THR D . n D 2 32 ASN 32 32 32 ASN ASN D . n D 2 33 PHE 33 33 33 PHE PHE D . n D 2 34 VAL 34 34 34 VAL VAL D . n D 2 35 TYR 35 35 35 TYR TYR D . n D 2 36 TRP 36 36 36 TRP TRP D . n D 2 37 TYR 37 37 37 TYR TYR D . n D 2 38 GLN 38 38 38 GLN GLN D . n D 2 39 GLN 39 39 39 GLN GLN D . n D 2 40 LEU 40 40 40 LEU LEU D . n D 2 41 PRO 41 41 41 PRO PRO D . n D 2 42 GLY 42 42 42 GLY GLY D . n D 2 43 ALA 43 43 43 ALA ALA D . n D 2 44 ALA 44 44 44 ALA ALA D . n D 2 45 PRO 45 45 45 PRO PRO D . n D 2 46 LYS 46 46 46 LYS LYS D . n D 2 47 LEU 47 47 47 LEU LEU D . n D 2 48 LEU 48 48 48 LEU LEU D . n D 2 49 ILE 49 49 49 ILE ILE D . n D 2 50 TYR 50 50 50 TYR TYR D . n D 2 51 LYS 51 51 51 LYS LYS D . n D 2 52 ASN 52 52 52 ASN ASN D . n D 2 53 ASP 53 53 53 ASP ASP D . n D 2 54 GLN 54 54 54 GLN GLN D . n D 2 55 ARG 55 55 55 ARG ARG D . n D 2 56 PRO 56 56 56 PRO PRO D . n D 2 57 SER 57 57 57 SER SER D . n D 2 58 GLY 58 58 58 GLY GLY D . n D 2 59 VAL 59 59 59 VAL VAL D . n D 2 60 PRO 60 60 60 PRO PRO D . n D 2 61 GLU 61 61 61 GLU GLU D . n D 2 62 ARG 62 62 62 ARG ARG D . n D 2 63 PHE 63 63 63 PHE PHE D . n D 2 64 PHE 64 64 64 PHE PHE D . n D 2 65 GLY 65 65 65 GLY GLY D . n D 2 66 SER 66 66 66 SER SER D . n D 2 67 LYS 67 67 67 LYS LYS D . n D 2 68 SER 68 68 68 SER SER D . n D 2 69 GLY 69 69 69 GLY GLY D . n D 2 70 THR 70 70 70 THR THR D . n D 2 71 SER 71 71 71 SER SER D . n D 2 72 ALA 72 72 72 ALA ALA D . n D 2 73 SER 73 73 73 SER SER D . n D 2 74 LEU 74 74 74 LEU LEU D . n D 2 75 ALA 75 75 75 ALA ALA D . n D 2 76 ILE 76 76 76 ILE ILE D . n D 2 77 SER 77 77 77 SER SER D . n D 2 78 GLY 78 78 78 GLY GLY D . n D 2 79 LEU 79 79 79 LEU LEU D . n D 2 80 ARG 80 80 80 ARG ARG D . n D 2 81 SER 81 81 81 SER SER D . n D 2 82 GLU 82 82 82 GLU GLU D . n D 2 83 ASP 83 83 83 ASP ASP D . n D 2 84 GLU 84 84 84 GLU GLU D . n D 2 85 VAL 85 85 85 VAL VAL D . n D 2 86 ASP 86 86 86 ASP ASP D . n D 2 87 TYR 87 87 87 TYR TYR D . n D 2 88 TYR 88 88 88 TYR TYR D . n D 2 89 CYS 89 89 89 CYS CYS D . n D 2 90 ALA 90 90 90 ALA ALA D . n D 2 91 ALA 91 91 91 ALA ALA D . n D 2 92 TRP 92 92 92 TRP TRP D . n D 2 93 ASP 93 93 93 ASP ASP D . n D 2 94 ASP 94 94 94 ASP ASP D . n D 2 95 SER 95 95 95 SER SER D . n D 2 96 LEU 96 96 96 LEU LEU D . n D 2 97 SER 97 97 97 SER SER D . n D 2 98 GLY 98 98 98 GLY GLY D . n D 2 99 HIS 99 99 99 HIS HIS D . n D 2 100 VAL 100 100 100 VAL VAL D . n D 2 101 PHE 101 101 101 PHE PHE D . n D 2 102 GLY 102 102 102 GLY GLY D . n D 2 103 ALA 103 103 103 ALA ALA D . n D 2 104 GLY 104 104 104 GLY GLY D . n D 2 105 THR 105 105 105 THR THR D . n D 2 106 LYS 106 106 106 LYS LYS D . n D 2 107 VAL 107 107 107 VAL VAL D . n D 2 108 THR 108 108 108 THR THR D . n D 2 109 VAL 109 109 109 VAL VAL D . n D 2 110 LEU 110 110 110 LEU LEU D . n E 3 1 GLU 1 1 ? ? ? E . n E 3 2 VAL 2 2 2 VAL VAL E . n E 3 3 GLN 3 3 3 GLN GLN E . n E 3 4 LEU 4 4 4 LEU LEU E . n E 3 5 VAL 5 5 5 VAL VAL E . n E 3 6 GLN 6 6 6 GLN GLN E . n E 3 7 SER 7 7 7 SER SER E . n E 3 8 GLY 8 8 8 GLY GLY E . n E 3 9 ALA 9 9 9 ALA ALA E . n E 3 10 GLU 10 10 10 GLU GLU E . n E 3 11 VAL 11 11 11 VAL VAL E . n E 3 12 LYS 12 12 12 LYS LYS E . n E 3 13 LYS 13 13 13 LYS LYS E . n E 3 14 PRO 14 14 14 PRO PRO E . n E 3 15 GLY 15 15 15 GLY GLY E . n E 3 16 ALA 16 16 16 ALA ALA E . n E 3 17 SER 17 17 17 SER SER E . n E 3 18 VAL 18 18 18 VAL VAL E . n E 3 19 LYS 19 19 19 LYS LYS E . n E 3 20 VAL 20 20 20 VAL VAL E . n E 3 21 SER 21 21 21 SER SER E . n E 3 22 CYS 22 22 22 CYS CYS E . n E 3 23 LYS 23 23 23 LYS LYS E . n E 3 24 ALA 24 24 24 ALA ALA E . n E 3 25 SER 25 25 25 SER SER E . n E 3 26 GLY 26 26 26 GLY GLY E . n E 3 27 TYR 27 27 27 TYR TYR E . n E 3 28 ILE 28 28 28 ILE ILE E . n E 3 29 PHE 29 29 29 PHE PHE E . n E 3 30 SER 30 30 30 SER SER E . n E 3 31 ASP 31 31 31 ASP ASP E . n E 3 32 TYR 32 32 32 TYR TYR E . n E 3 33 ASN 33 33 33 ASN ASN E . n E 3 34 ILE 34 34 34 ILE ILE E . n E 3 35 HIS 35 35 35 HIS HIS E . n E 3 36 TRP 36 36 36 TRP TRP E . n E 3 37 VAL 37 37 37 VAL VAL E . n E 3 38 ARG 38 38 38 ARG ARG E . n E 3 39 GLN 39 39 39 GLN GLN E . n E 3 40 ALA 40 40 40 ALA ALA E . n E 3 41 PRO 41 41 41 PRO PRO E . n E 3 42 GLY 42 42 42 GLY GLY E . n E 3 43 GLN 43 43 43 GLN GLN E . n E 3 44 GLY 44 44 44 GLY GLY E . n E 3 45 LEU 45 45 45 LEU LEU E . n E 3 46 GLU 46 46 46 GLU GLU E . n E 3 47 TRP 47 47 47 TRP TRP E . n E 3 48 MET 48 48 48 MET MET E . n E 3 49 GLY 49 49 49 GLY GLY E . n E 3 50 TRP 50 50 50 TRP TRP E . n E 3 51 ILE 51 51 51 ILE ILE E . n E 3 52 SER 52 52 52 SER SER E . n E 3 53 PRO 53 53 53 PRO PRO E . n E 3 54 ASP 54 54 54 ASP ASP E . n E 3 55 SER 55 55 55 SER SER E . n E 3 56 ASP 56 56 56 ASP ASP E . n E 3 57 ASP 57 57 57 ASP ASP E . n E 3 58 THR 58 58 58 THR THR E . n E 3 59 ASN 59 59 59 ASN ASN E . n E 3 60 TYR 60 60 60 TYR TYR E . n E 3 61 ALA 61 61 61 ALA ALA E . n E 3 62 GLN 62 62 62 GLN GLN E . n E 3 63 SER 63 63 63 SER SER E . n E 3 64 PHE 64 64 64 PHE PHE E . n E 3 65 GLN 65 65 65 GLN GLN E . n E 3 66 GLY 66 66 66 GLY GLY E . n E 3 67 ARG 67 67 67 ARG ARG E . n E 3 68 VAL 68 68 68 VAL VAL E . n E 3 69 THR 69 69 69 THR THR E . n E 3 70 MET 70 70 70 MET MET E . n E 3 71 THR 71 71 71 THR THR E . n E 3 72 ARG 72 72 72 ARG ARG E . n E 3 73 ASP 73 73 73 ASP ASP E . n E 3 74 THR 74 74 74 THR THR E . n E 3 75 SER 75 75 75 SER SER E . n E 3 76 ILE 76 76 76 ILE ILE E . n E 3 77 THR 77 77 77 THR THR E . n E 3 78 THR 78 78 78 THR THR E . n E 3 79 VAL 79 79 79 VAL VAL E . n E 3 80 TYR 80 80 80 TYR TYR E . n E 3 81 MET 81 81 81 MET MET E . n E 3 82 GLU 82 82 82 GLU GLU E . n E 3 83 LEU 83 83 83 LEU LEU E . n E 3 84 SER 84 84 84 SER SER E . n E 3 85 SER 85 85 85 SER SER E . n E 3 86 LEU 86 86 86 LEU LEU E . n E 3 87 ARG 87 87 87 ARG ARG E . n E 3 88 SER 88 88 88 SER SER E . n E 3 89 ASP 89 89 89 ASP ASP E . n E 3 90 ASP 90 90 90 ASP ASP E . n E 3 91 THR 91 91 91 THR THR E . n E 3 92 ALA 92 92 92 ALA ALA E . n E 3 93 VAL 93 93 93 VAL VAL E . n E 3 94 TYR 94 94 94 TYR TYR E . n E 3 95 PHE 95 95 95 PHE PHE E . n E 3 96 CYS 96 96 96 CYS CYS E . n E 3 97 ALA 97 97 97 ALA ALA E . n E 3 98 ARG 98 98 98 ARG ARG E . n E 3 99 SER 99 99 99 SER SER E . n E 3 100 VAL 100 100 100 VAL VAL E . n E 3 101 GLY 101 101 101 GLY GLY E . n E 3 102 TYR 102 102 102 TYR TYR E . n E 3 103 CYS 103 103 103 CYS CYS E . n E 3 104 SER 104 104 104 SER SER E . n E 3 105 LEU 105 105 105 LEU LEU E . n E 3 106 ASN 106 106 106 ASN ASN E . n E 3 107 SER 107 107 107 SER SER E . n E 3 108 CYS 108 108 108 CYS CYS E . n E 3 109 GLN 109 109 109 GLN GLN E . n E 3 110 ARG 110 110 110 ARG ARG E . n E 3 111 TRP 111 111 111 TRP TRP E . n E 3 112 MET 112 112 112 MET MET E . n E 3 113 TRP 113 113 113 TRP TRP E . n E 3 114 PHE 114 114 114 PHE PHE E . n E 3 115 ASP 115 115 115 ASP ASP E . n E 3 116 THR 116 116 116 THR THR E . n E 3 117 TRP 117 117 117 TRP TRP E . n E 3 118 GLY 118 118 118 GLY GLY E . n E 3 119 GLN 119 119 119 GLN GLN E . n E 3 120 GLY 120 120 120 GLY GLY E . n E 3 121 ALA 121 121 121 ALA ALA E . n E 3 122 LEU 122 122 122 LEU LEU E . n E 3 123 VAL 123 123 123 VAL VAL E . n E 3 124 THR 124 124 124 THR THR E . n E 3 125 VAL 125 125 125 VAL VAL E . n E 3 126 SER 126 126 ? ? ? E . n E 3 127 SER 127 127 ? ? ? E . n F 3 1 GLU 1 1 ? ? ? F . n F 3 2 VAL 2 2 2 VAL VAL F . n F 3 3 GLN 3 3 3 GLN GLN F . n F 3 4 LEU 4 4 4 LEU LEU F . n F 3 5 VAL 5 5 5 VAL VAL F . n F 3 6 GLN 6 6 6 GLN GLN F . n F 3 7 SER 7 7 7 SER SER F . n F 3 8 GLY 8 8 8 GLY GLY F . n F 3 9 ALA 9 9 9 ALA ALA F . n F 3 10 GLU 10 10 10 GLU GLU F . n F 3 11 VAL 11 11 11 VAL VAL F . n F 3 12 LYS 12 12 12 LYS LYS F . n F 3 13 LYS 13 13 13 LYS LYS F . n F 3 14 PRO 14 14 14 PRO PRO F . n F 3 15 GLY 15 15 15 GLY GLY F . n F 3 16 ALA 16 16 16 ALA ALA F . n F 3 17 SER 17 17 17 SER SER F . n F 3 18 VAL 18 18 18 VAL VAL F . n F 3 19 LYS 19 19 19 LYS LYS F . n F 3 20 VAL 20 20 20 VAL VAL F . n F 3 21 SER 21 21 21 SER SER F . n F 3 22 CYS 22 22 22 CYS CYS F . n F 3 23 LYS 23 23 23 LYS LYS F . n F 3 24 ALA 24 24 24 ALA ALA F . n F 3 25 SER 25 25 25 SER SER F . n F 3 26 GLY 26 26 26 GLY GLY F . n F 3 27 TYR 27 27 27 TYR TYR F . n F 3 28 ILE 28 28 28 ILE ILE F . n F 3 29 PHE 29 29 29 PHE PHE F . n F 3 30 SER 30 30 30 SER SER F . n F 3 31 ASP 31 31 31 ASP ASP F . n F 3 32 TYR 32 32 32 TYR TYR F . n F 3 33 ASN 33 33 33 ASN ASN F . n F 3 34 ILE 34 34 34 ILE ILE F . n F 3 35 HIS 35 35 35 HIS HIS F . n F 3 36 TRP 36 36 36 TRP TRP F . n F 3 37 VAL 37 37 37 VAL VAL F . n F 3 38 ARG 38 38 38 ARG ARG F . n F 3 39 GLN 39 39 39 GLN GLN F . n F 3 40 ALA 40 40 40 ALA ALA F . n F 3 41 PRO 41 41 41 PRO PRO F . n F 3 42 GLY 42 42 42 GLY GLY F . n F 3 43 GLN 43 43 43 GLN GLN F . n F 3 44 GLY 44 44 44 GLY GLY F . n F 3 45 LEU 45 45 45 LEU LEU F . n F 3 46 GLU 46 46 46 GLU GLU F . n F 3 47 TRP 47 47 47 TRP TRP F . n F 3 48 MET 48 48 48 MET MET F . n F 3 49 GLY 49 49 49 GLY GLY F . n F 3 50 TRP 50 50 50 TRP TRP F . n F 3 51 ILE 51 51 51 ILE ILE F . n F 3 52 SER 52 52 52 SER SER F . n F 3 53 PRO 53 53 53 PRO PRO F . n F 3 54 ASP 54 54 54 ASP ASP F . n F 3 55 SER 55 55 55 SER SER F . n F 3 56 ASP 56 56 56 ASP ASP F . n F 3 57 ASP 57 57 57 ASP ASP F . n F 3 58 THR 58 58 58 THR THR F . n F 3 59 ASN 59 59 59 ASN ASN F . n F 3 60 TYR 60 60 60 TYR TYR F . n F 3 61 ALA 61 61 61 ALA ALA F . n F 3 62 GLN 62 62 62 GLN GLN F . n F 3 63 SER 63 63 63 SER SER F . n F 3 64 PHE 64 64 64 PHE PHE F . n F 3 65 GLN 65 65 65 GLN GLN F . n F 3 66 GLY 66 66 66 GLY GLY F . n F 3 67 ARG 67 67 67 ARG ARG F . n F 3 68 VAL 68 68 68 VAL VAL F . n F 3 69 THR 69 69 69 THR THR F . n F 3 70 MET 70 70 70 MET MET F . n F 3 71 THR 71 71 71 THR THR F . n F 3 72 ARG 72 72 72 ARG ARG F . n F 3 73 ASP 73 73 73 ASP ASP F . n F 3 74 THR 74 74 74 THR THR F . n F 3 75 SER 75 75 75 SER SER F . n F 3 76 ILE 76 76 76 ILE ILE F . n F 3 77 THR 77 77 77 THR THR F . n F 3 78 THR 78 78 78 THR THR F . n F 3 79 VAL 79 79 79 VAL VAL F . n F 3 80 TYR 80 80 80 TYR TYR F . n F 3 81 MET 81 81 81 MET MET F . n F 3 82 GLU 82 82 82 GLU GLU F . n F 3 83 LEU 83 83 83 LEU LEU F . n F 3 84 SER 84 84 84 SER SER F . n F 3 85 SER 85 85 85 SER SER F . n F 3 86 LEU 86 86 86 LEU LEU F . n F 3 87 ARG 87 87 87 ARG ARG F . n F 3 88 SER 88 88 88 SER SER F . n F 3 89 ASP 89 89 89 ASP ASP F . n F 3 90 ASP 90 90 90 ASP ASP F . n F 3 91 THR 91 91 91 THR THR F . n F 3 92 ALA 92 92 92 ALA ALA F . n F 3 93 VAL 93 93 93 VAL VAL F . n F 3 94 TYR 94 94 94 TYR TYR F . n F 3 95 PHE 95 95 95 PHE PHE F . n F 3 96 CYS 96 96 96 CYS CYS F . n F 3 97 ALA 97 97 97 ALA ALA F . n F 3 98 ARG 98 98 98 ARG ARG F . n F 3 99 SER 99 99 99 SER SER F . n F 3 100 VAL 100 100 100 VAL VAL F . n F 3 101 GLY 101 101 101 GLY GLY F . n F 3 102 TYR 102 102 102 TYR TYR F . n F 3 103 CYS 103 103 103 CYS CYS F . n F 3 104 SER 104 104 104 SER SER F . n F 3 105 LEU 105 105 105 LEU LEU F . n F 3 106 ASN 106 106 106 ASN ASN F . n F 3 107 SER 107 107 107 SER SER F . n F 3 108 CYS 108 108 108 CYS CYS F . n F 3 109 GLN 109 109 109 GLN GLN F . n F 3 110 ARG 110 110 110 ARG ARG F . n F 3 111 TRP 111 111 111 TRP TRP F . n F 3 112 MET 112 112 112 MET MET F . n F 3 113 TRP 113 113 113 TRP TRP F . n F 3 114 PHE 114 114 114 PHE PHE F . n F 3 115 ASP 115 115 115 ASP ASP F . n F 3 116 THR 116 116 116 THR THR F . n F 3 117 TRP 117 117 117 TRP TRP F . n F 3 118 GLY 118 118 118 GLY GLY F . n F 3 119 GLN 119 119 119 GLN GLN F . n F 3 120 GLY 120 120 120 GLY GLY F . n F 3 121 ALA 121 121 121 ALA ALA F . n F 3 122 LEU 122 122 122 LEU LEU F . n F 3 123 VAL 123 123 123 VAL VAL F . n F 3 124 THR 124 124 124 THR THR F . n F 3 125 VAL 125 125 125 VAL VAL F . n F 3 126 SER 126 126 ? ? ? F . n F 3 127 SER 127 127 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 NAG 1 601 528 NAG NAG A . H 4 NAG 1 601 516 NAG NAG B . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8ZC5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8ZC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ZC5 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8ZC5 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 6675 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.745 ? 9082 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.855 ? 921 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.052 ? 954 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 1182 ? f_plane_restr ? ? # _struct.entry_id 8ZC5 _struct.title 'SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ZC5 _struct_keywords.text 'Spike protein, Antibody Fab fragment, Complex, VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIA PGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFP LQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 332 2 PDB 8ZC5 8ZC5 ? 2 ? 1 3 PDB 8ZC5 8ZC5 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8ZC5 A 1 ? 196 ? P0DTC2 332 ? 527 ? 332 527 2 1 8ZC5 B 1 ? 196 ? P0DTC2 332 ? 527 ? 332 527 3 2 8ZC5 C 1 ? 110 ? 8ZC5 1 ? 110 ? 1 110 4 2 8ZC5 D 1 ? 110 ? 8ZC5 1 ? 110 ? 1 110 5 3 8ZC5 E 1 ? 127 ? 8ZC5 1 ? 127 ? 1 127 6 3 8ZC5 F 1 ? 127 ? 8ZC5 1 ? 127 ? 1 127 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8ZC5 ASP A 8 ? UNP P0DTC2 GLY 339 variant 339 1 1 8ZC5 PHE A 40 ? UNP P0DTC2 SER 371 variant 371 2 1 8ZC5 PRO A 42 ? UNP P0DTC2 SER 373 variant 373 3 1 8ZC5 PHE A 44 ? UNP P0DTC2 SER 375 variant 375 4 1 8ZC5 ALA A 45 ? UNP P0DTC2 THR 376 variant 376 5 1 8ZC5 ASN A 74 ? UNP P0DTC2 ASP 405 variant 405 6 1 8ZC5 SER A 77 ? UNP P0DTC2 ARG 408 variant 408 7 1 8ZC5 ASN A 86 ? UNP P0DTC2 LYS 417 variant 417 8 1 8ZC5 LYS A 109 ? UNP P0DTC2 ASN 440 variant 440 9 1 8ZC5 ARG A 121 ? UNP P0DTC2 LEU 452 variant 452 10 1 8ZC5 ASN A 146 ? UNP P0DTC2 SER 477 variant 477 11 1 8ZC5 LYS A 147 ? UNP P0DTC2 THR 478 variant 478 12 1 8ZC5 ALA A 153 ? UNP P0DTC2 GLU 484 variant 484 13 1 8ZC5 VAL A 155 ? UNP P0DTC2 PHE 486 variant 486 14 1 8ZC5 ARG A 167 ? UNP P0DTC2 GLN 498 variant 498 15 1 8ZC5 TYR A 170 ? UNP P0DTC2 ASN 501 variant 501 16 1 8ZC5 HIS A 174 ? UNP P0DTC2 TYR 505 variant 505 17 2 8ZC5 ASP B 8 ? UNP P0DTC2 GLY 339 variant 339 18 2 8ZC5 PHE B 40 ? UNP P0DTC2 SER 371 variant 371 19 2 8ZC5 PRO B 42 ? UNP P0DTC2 SER 373 variant 373 20 2 8ZC5 PHE B 44 ? UNP P0DTC2 SER 375 variant 375 21 2 8ZC5 ALA B 45 ? UNP P0DTC2 THR 376 variant 376 22 2 8ZC5 ASN B 74 ? UNP P0DTC2 ASP 405 variant 405 23 2 8ZC5 SER B 77 ? UNP P0DTC2 ARG 408 variant 408 24 2 8ZC5 ASN B 86 ? UNP P0DTC2 LYS 417 variant 417 25 2 8ZC5 LYS B 109 ? UNP P0DTC2 ASN 440 variant 440 26 2 8ZC5 ARG B 121 ? UNP P0DTC2 LEU 452 variant 452 27 2 8ZC5 ASN B 146 ? UNP P0DTC2 SER 477 variant 477 28 2 8ZC5 LYS B 147 ? UNP P0DTC2 THR 478 variant 478 29 2 8ZC5 ALA B 153 ? UNP P0DTC2 GLU 484 variant 484 30 2 8ZC5 VAL B 155 ? UNP P0DTC2 PHE 486 variant 486 31 2 8ZC5 ARG B 167 ? UNP P0DTC2 GLN 498 variant 498 32 2 8ZC5 TYR B 170 ? UNP P0DTC2 ASN 501 variant 501 33 2 8ZC5 HIS B 174 ? UNP P0DTC2 TYR 505 variant 505 34 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 6 ? ASN A 12 ? PRO A 337 ASN A 343 1 ? 7 HELX_P HELX_P2 AA2 ARG A 72 ? VAL A 76 ? ARG A 403 VAL A 407 5 ? 5 HELX_P HELX_P3 AA3 GLY A 85 ? ASN A 91 ? GLY A 416 ASN A 422 1 ? 7 HELX_P HELX_P4 AA4 GLY A 171 ? GLN A 175 ? GLY A 502 GLN A 506 5 ? 5 HELX_P HELX_P5 AA5 ASP B 8 ? ASN B 12 ? ASP B 339 ASN B 343 1 ? 5 HELX_P HELX_P6 AA6 ASN B 74 ? ILE B 79 ? ASN B 405 ILE B 410 5 ? 6 HELX_P HELX_P7 AA7 GLY B 171 ? HIS B 174 ? GLY B 502 HIS B 505 5 ? 4 HELX_P HELX_P8 AA8 ARG D 80 ? GLU D 84 ? ARG D 80 GLU D 84 5 ? 5 HELX_P HELX_P9 AA9 ILE E 28 ? TYR E 32 ? ILE E 28 TYR E 32 5 ? 5 HELX_P HELX_P10 AB1 ALA E 61 ? GLN E 65 ? ALA E 61 GLN E 65 5 ? 5 HELX_P HELX_P11 AB2 ARG E 87 ? THR E 91 ? ARG E 87 THR E 91 5 ? 5 HELX_P HELX_P12 AB3 CYS E 108 ? MET E 112 ? CYS E 108 MET E 112 5 ? 5 HELX_P HELX_P13 AB4 ARG F 87 ? THR F 91 ? ARG F 87 THR F 91 5 ? 5 HELX_P HELX_P14 AB5 CYS F 108 ? MET F 112 ? CYS F 108 MET F 112 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 194 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? A CYS 149 SG ? ? ? 1_555 A CYS 157 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf5 disulf ? ? B CYS 48 SG ? ? ? 1_555 B CYS 101 SG ? ? B CYS 379 B CYS 432 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? B CYS 149 SG ? ? ? 1_555 B CYS 157 SG ? ? B CYS 480 B CYS 488 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf7 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 89 SG ? ? C CYS 22 C CYS 89 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf8 disulf ? ? D CYS 22 SG ? ? ? 1_555 D CYS 89 SG ? ? D CYS 22 D CYS 89 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf9 disulf ? ? E CYS 22 SG ? ? ? 1_555 E CYS 96 SG ? ? E CYS 22 E CYS 96 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf10 disulf ? ? E CYS 103 SG ? ? ? 1_555 E CYS 108 SG ? ? E CYS 103 E CYS 108 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf11 disulf ? ? F CYS 22 SG ? ? ? 1_555 F CYS 96 SG ? ? F CYS 22 F CYS 96 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf12 disulf ? ? F CYS 103 SG ? ? ? 1_555 F CYS 108 SG ? ? F CYS 103 F CYS 108 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale one ? A ASN 12 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 343 A NAG 601 1_555 ? ? ? ? ? ? ? 1.434 ? N-Glycosylation covale2 covale one ? B ASN 12 ND2 ? ? ? 1_555 H NAG . C1 ? ? B ASN 343 B NAG 601 1_555 ? ? ? ? ? ? ? 1.429 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 5 ? AA8 ? 4 ? AA9 ? 3 ? AB1 ? 2 ? AB2 ? 3 ? AB3 ? 4 ? AB4 ? 4 ? AB5 ? 4 ? AB6 ? 4 ? AB7 ? 4 ? AB8 ? 5 ? AB9 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AB1 1 2 ? parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel AB7 3 4 ? anti-parallel AB8 1 2 ? anti-parallel AB8 2 3 ? anti-parallel AB8 3 4 ? anti-parallel AB8 4 5 ? anti-parallel AB9 1 2 ? anti-parallel AB9 2 3 ? anti-parallel AB9 3 4 ? anti-parallel AB9 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 23 ? ILE A 27 ? ASN A 354 ILE A 358 AA1 2 VAL A 64 ? ILE A 71 ? VAL A 395 ILE A 402 AA1 3 TYR A 177 ? SER A 183 ? TYR A 508 SER A 514 AA1 4 GLY A 100 ? ASN A 106 ? GLY A 431 ASN A 437 AA1 5 ALA A 45 ? TYR A 49 ? ALA A 376 TYR A 380 AA2 1 ARG A 121 ? ARG A 123 ? ARG A 452 ARG A 454 AA2 2 LEU A 161 ? SER A 163 ? LEU A 492 SER A 494 AA3 1 TYR A 142 ? GLN A 143 ? TYR A 473 GLN A 474 AA3 2 CYS A 157 ? TYR A 158 ? CYS A 488 TYR A 489 AA4 1 ASN B 23 ? ILE B 27 ? ASN B 354 ILE B 358 AA4 2 VAL B 64 ? ARG B 72 ? VAL B 395 ARG B 403 AA4 3 PRO B 176 ? SER B 183 ? PRO B 507 SER B 514 AA4 4 CYS B 101 ? TRP B 105 ? CYS B 432 TRP B 436 AA4 5 PHE B 43 ? PHE B 46 ? PHE B 374 PHE B 377 AA5 1 ARG B 121 ? ARG B 123 ? ARG B 452 ARG B 454 AA5 2 LEU B 161 ? SER B 163 ? LEU B 492 SER B 494 AA6 1 TYR B 142 ? GLN B 143 ? TYR B 473 GLN B 474 AA6 2 CYS B 157 ? TYR B 158 ? CYS B 488 TYR B 489 AA7 1 SER C 9 ? GLY C 12 ? SER C 9 GLY C 12 AA7 2 THR C 105 ? VAL C 109 ? THR C 105 VAL C 109 AA7 3 ASP C 86 ? ASP C 93 ? ASP C 86 ASP C 93 AA7 4 VAL C 34 ? GLN C 39 ? VAL C 34 GLN C 39 AA7 5 LYS C 46 ? ILE C 49 ? LYS C 46 ILE C 49 AA8 1 SER C 9 ? GLY C 12 ? SER C 9 GLY C 12 AA8 2 THR C 105 ? VAL C 109 ? THR C 105 VAL C 109 AA8 3 ASP C 86 ? ASP C 93 ? ASP C 86 ASP C 93 AA8 4 GLY C 98 ? VAL C 100 ? GLY C 98 VAL C 100 AA9 1 SER C 17 ? SER C 23 ? SER C 17 SER C 23 AA9 2 SER C 71 ? SER C 77 ? SER C 71 SER C 77 AA9 3 PHE C 63 ? LYS C 67 ? PHE C 63 LYS C 67 AB1 1 SER D 9 ? ALA D 10 ? SER D 9 ALA D 10 AB1 2 LYS D 106 ? VAL D 107 ? LYS D 106 VAL D 107 AB2 1 SER D 17 ? CYS D 22 ? SER D 17 CYS D 22 AB2 2 ALA D 72 ? SER D 77 ? ALA D 72 SER D 77 AB2 3 PHE D 64 ? LYS D 67 ? PHE D 64 LYS D 67 AB3 1 PRO D 45 ? ILE D 49 ? PRO D 45 ILE D 49 AB3 2 VAL D 34 ? GLN D 39 ? VAL D 34 GLN D 39 AB3 3 ASP D 86 ? ASP D 93 ? ASP D 86 ASP D 93 AB3 4 GLY D 98 ? PHE D 101 ? GLY D 98 PHE D 101 AB4 1 GLN E 3 ? GLN E 6 ? GLN E 3 GLN E 6 AB4 2 VAL E 20 ? SER E 25 ? VAL E 20 SER E 25 AB4 3 THR E 78 ? LEU E 83 ? THR E 78 LEU E 83 AB4 4 VAL E 68 ? ASP E 73 ? VAL E 68 ASP E 73 AB5 1 LEU E 45 ? TRP E 47 ? LEU E 45 TRP E 47 AB5 2 ILE E 34 ? GLN E 39 ? ILE E 34 GLN E 39 AB5 3 ALA E 92 ? SER E 99 ? ALA E 92 SER E 99 AB5 4 PHE E 114 ? TRP E 117 ? PHE E 114 TRP E 117 AB6 1 LEU E 45 ? TRP E 47 ? LEU E 45 TRP E 47 AB6 2 ILE E 34 ? GLN E 39 ? ILE E 34 GLN E 39 AB6 3 ALA E 92 ? SER E 99 ? ALA E 92 SER E 99 AB6 4 ALA E 121 ? VAL E 123 ? ALA E 121 VAL E 123 AB7 1 LEU F 4 ? GLN F 6 ? LEU F 4 GLN F 6 AB7 2 VAL F 18 ? ALA F 24 ? VAL F 18 ALA F 24 AB7 3 THR F 78 ? LEU F 83 ? THR F 78 LEU F 83 AB7 4 VAL F 68 ? THR F 71 ? VAL F 68 THR F 71 AB8 1 THR F 58 ? ASN F 59 ? THR F 58 ASN F 59 AB8 2 LEU F 45 ? ILE F 51 ? LEU F 45 ILE F 51 AB8 3 ASN F 33 ? GLN F 39 ? ASN F 33 GLN F 39 AB8 4 ALA F 92 ? SER F 99 ? ALA F 92 SER F 99 AB8 5 PHE F 114 ? THR F 116 ? PHE F 114 THR F 116 AB9 1 THR F 58 ? ASN F 59 ? THR F 58 ASN F 59 AB9 2 LEU F 45 ? ILE F 51 ? LEU F 45 ILE F 51 AB9 3 ASN F 33 ? GLN F 39 ? ASN F 33 GLN F 39 AB9 4 ALA F 92 ? SER F 99 ? ALA F 92 SER F 99 AB9 5 ALA F 121 ? VAL F 123 ? ALA F 121 VAL F 123 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 27 ? N ILE A 358 O VAL A 64 ? O VAL A 395 AA1 2 3 N PHE A 69 ? N PHE A 400 O VAL A 179 ? O VAL A 510 AA1 3 4 O VAL A 180 ? O VAL A 511 N ILE A 103 ? N ILE A 434 AA1 4 5 O VAL A 102 ? O VAL A 433 N LYS A 47 ? N LYS A 378 AA2 1 2 N TYR A 122 ? N TYR A 453 O GLN A 162 ? O GLN A 493 AA3 1 2 N TYR A 142 ? N TYR A 473 O TYR A 158 ? O TYR A 489 AA4 1 2 N LYS B 25 ? N LYS B 356 O ALA B 66 ? O ALA B 397 AA4 2 3 N ASP B 67 ? N ASP B 398 O VAL B 181 ? O VAL B 512 AA4 3 4 O VAL B 180 ? O VAL B 511 N ILE B 103 ? N ILE B 434 AA4 4 5 O ALA B 104 ? O ALA B 435 N PHE B 44 ? N PHE B 375 AA5 1 2 N TYR B 122 ? N TYR B 453 O GLN B 162 ? O GLN B 493 AA6 1 2 N TYR B 142 ? N TYR B 473 O TYR B 158 ? O TYR B 489 AA7 1 2 N GLY C 12 ? N GLY C 12 O THR C 108 ? O THR C 108 AA7 2 3 O THR C 105 ? O THR C 105 N TYR C 87 ? N TYR C 87 AA7 3 4 O ALA C 90 ? O ALA C 90 N TYR C 35 ? N TYR C 35 AA7 4 5 N TRP C 36 ? N TRP C 36 O ILE C 49 ? O ILE C 49 AA8 1 2 N GLY C 12 ? N GLY C 12 O THR C 108 ? O THR C 108 AA8 2 3 O THR C 105 ? O THR C 105 N TYR C 87 ? N TYR C 87 AA8 3 4 N ALA C 91 ? N ALA C 91 O VAL C 100 ? O VAL C 100 AA9 1 2 N CYS C 22 ? N CYS C 22 O ALA C 72 ? O ALA C 72 AA9 2 3 O ALA C 75 ? O ALA C 75 N PHE C 64 ? N PHE C 64 AB1 1 2 N ALA D 10 ? N ALA D 10 O LYS D 106 ? O LYS D 106 AB2 1 2 N ILE D 20 ? N ILE D 20 O LEU D 74 ? O LEU D 74 AB2 2 3 O ALA D 75 ? O ALA D 75 N PHE D 64 ? N PHE D 64 AB3 1 2 O LEU D 48 ? O LEU D 48 N TRP D 36 ? N TRP D 36 AB3 2 3 N TYR D 37 ? N TYR D 37 O TYR D 88 ? O TYR D 88 AB3 3 4 N ALA D 91 ? N ALA D 91 O VAL D 100 ? O VAL D 100 AB4 1 2 N VAL E 5 ? N VAL E 5 O LYS E 23 ? O LYS E 23 AB4 2 3 N CYS E 22 ? N CYS E 22 O VAL E 79 ? O VAL E 79 AB4 3 4 O GLU E 82 ? O GLU E 82 N THR E 69 ? N THR E 69 AB5 1 2 O GLU E 46 ? O GLU E 46 N ARG E 38 ? N ARG E 38 AB5 2 3 N VAL E 37 ? N VAL E 37 O PHE E 95 ? O PHE E 95 AB5 3 4 N ARG E 98 ? N ARG E 98 O THR E 116 ? O THR E 116 AB6 1 2 O GLU E 46 ? O GLU E 46 N ARG E 38 ? N ARG E 38 AB6 2 3 N VAL E 37 ? N VAL E 37 O PHE E 95 ? O PHE E 95 AB6 3 4 N ALA E 92 ? N ALA E 92 O VAL E 123 ? O VAL E 123 AB7 1 2 N VAL F 5 ? N VAL F 5 O LYS F 23 ? O LYS F 23 AB7 2 3 N VAL F 20 ? N VAL F 20 O MET F 81 ? O MET F 81 AB7 3 4 O GLU F 82 ? O GLU F 82 N THR F 69 ? N THR F 69 AB8 1 2 O ASN F 59 ? O ASN F 59 N TRP F 50 ? N TRP F 50 AB8 2 3 O GLU F 46 ? O GLU F 46 N ARG F 38 ? N ARG F 38 AB8 3 4 N VAL F 37 ? N VAL F 37 O PHE F 95 ? O PHE F 95 AB8 4 5 N ARG F 98 ? N ARG F 98 O ASP F 115 ? O ASP F 115 AB9 1 2 O ASN F 59 ? O ASN F 59 N TRP F 50 ? N TRP F 50 AB9 2 3 O GLU F 46 ? O GLU F 46 N ARG F 38 ? N ARG F 38 AB9 3 4 N VAL F 37 ? N VAL F 37 O PHE F 95 ? O PHE F 95 AB9 4 5 N ALA F 92 ? N ALA F 92 O VAL F 123 ? O VAL F 123 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 343 ? ? -95.36 30.27 2 1 PRO A 384 ? ? -82.96 45.61 3 1 ASN A 439 ? ? -90.47 48.75 4 1 PHE B 371 ? ? -118.29 -169.69 5 1 ASN B 417 ? ? -105.81 -82.31 6 1 LEU C 48 ? ? -120.30 -54.87 7 1 ASN C 52 ? ? 75.26 -4.55 8 1 ASN D 52 ? ? 71.92 -9.80 9 1 PRO E 53 ? ? -83.73 43.31 10 1 THR E 77 ? ? 39.49 40.55 11 1 TYR E 102 ? ? -160.24 116.02 12 1 SER E 107 ? ? -97.20 57.88 13 1 PRO F 53 ? ? -79.18 45.36 # _pdbx_entry_details.entry_id 8ZC5 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8ZC5 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8ZC5 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.91 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 347846 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1,2,3 # _em_imaging.entry_id 8ZC5 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8ZC5 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295 _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8ZC5 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ILE 332 ? B ILE 1 2 1 Y 1 B THR 333 ? B THR 2 3 1 Y 1 B ASN 334 ? B ASN 3 4 1 Y 1 B LEU 335 ? B LEU 4 5 1 Y 1 B CYS 336 ? B CYS 5 6 1 Y 1 B PRO 337 ? B PRO 6 7 1 Y 1 B SER 359 ? B SER 28 8 1 Y 1 B ASN 360 ? B ASN 29 9 1 Y 1 B CYS 361 ? B CYS 30 10 1 Y 1 B VAL 362 ? B VAL 31 11 1 Y 1 B ALA 363 ? B ALA 32 12 1 Y 1 B ASP 364 ? B ASP 33 13 1 Y 1 B TYR 365 ? B TYR 34 14 1 Y 1 B CYS 391 ? B CYS 60 15 1 Y 1 B PHE 392 ? B PHE 61 16 1 Y 1 B THR 393 ? B THR 62 17 1 Y 1 B GLU 516 ? B GLU 185 18 1 Y 1 B LEU 517 ? B LEU 186 19 1 Y 1 B LEU 518 ? B LEU 187 20 1 Y 1 B HIS 519 ? B HIS 188 21 1 Y 1 B ALA 520 ? B ALA 189 22 1 Y 1 B PRO 521 ? B PRO 190 23 1 Y 1 B ALA 522 ? B ALA 191 24 1 Y 1 B THR 523 ? B THR 192 25 1 Y 1 B VAL 524 ? B VAL 193 26 1 Y 1 B CYS 525 ? B CYS 194 27 1 Y 1 B GLY 526 ? B GLY 195 28 1 Y 1 B PRO 527 ? B PRO 196 29 1 Y 1 C GLN 1 ? C GLN 1 30 1 Y 1 D GLN 1 ? D GLN 1 31 1 Y 1 E GLU 1 ? E GLU 1 32 1 Y 1 E SER 126 ? E SER 126 33 1 Y 1 E SER 127 ? E SER 127 34 1 Y 1 F GLU 1 ? F GLU 1 35 1 Y 1 F SER 126 ? F SER 126 36 1 Y 1 F SER 127 ? F SER 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2697049 _em_entity_assembly_naturalsource.organism 'Severe acute respiratory syndrome coronavirus 2' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Other government' ? EKPG21-06 1 'Other government' ? SRPG22-002 2 'Other government' ? 2021A1515011289 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 8ZC5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_