HEADER LYASE 14-MAY-24 8ZIL TITLE GAMMA-LYASE CNDF IN COMPLEX WITH ETHYL ACETOACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLP DEPENDENT GAMMA-LYASE CNDF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SEQUENCE MATCHES GENBANK CODE KAK5801372.1, EXCEPT FOR COMPND 6 TWO MISMATCHES (F15L AND L561F). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM CITRINUM; SOURCE 3 ORGANISM_TAXID: 5077; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLP DEPENDENT, GAMMA-LYASE, C-C BOND FORMATION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.GAO,J.ZHOU REVDAT 2 26-NOV-25 8ZIL 1 JRNL REVDAT 1 19-NOV-25 8ZIL 0 JRNL AUTH Y.GAO,B.WANG,J.ZHOU,Y.GU JRNL TITL STRUCTURE AND MECHANISM OF THE PYRIDOXAL JRNL TITL 2 5'-PHOSPHATE-DEPENDENT AMINO ACID GAMMA-SUBSTITUTION ENZYME JRNL TITL 3 IN 6-ALKYL-PIPECOLATE BIOSYNTHESIS JRNL REF ACS CATALYSIS 18893 2025 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.5C04786 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8100 - 5.8900 1.00 3063 145 0.2090 0.1955 REMARK 3 2 5.8900 - 4.6800 1.00 2921 151 0.2191 0.2185 REMARK 3 3 4.6800 - 4.0900 0.99 2863 129 0.2176 0.2545 REMARK 3 4 4.0900 - 3.7100 0.99 2867 136 0.2377 0.3054 REMARK 3 5 3.7100 - 3.4500 0.99 2843 159 0.2489 0.2737 REMARK 3 6 3.4500 - 3.2400 1.00 2848 144 0.2650 0.2792 REMARK 3 7 3.2400 - 3.0800 1.00 2812 152 0.2822 0.2895 REMARK 3 8 3.0800 - 2.9500 1.00 2869 148 0.2857 0.3127 REMARK 3 9 2.9500 - 2.8300 1.00 2834 138 0.3007 0.2962 REMARK 3 10 2.8300 - 2.7400 1.00 2810 153 0.3415 0.3756 REMARK 3 11 2.7400 - 2.6500 1.00 2846 136 0.3626 0.3786 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.352 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.996 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7520 REMARK 3 ANGLE : 0.768 10224 REMARK 3 CHIRALITY : 0.050 1149 REMARK 3 PLANARITY : 0.005 1323 REMARK 3 DIHEDRAL : 15.506 2721 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ZIL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1300047844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33298 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 45.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.93800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM SULFATE, 0.1M BIS-TRIS REMARK 280 PROPANE PH 7.5, 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.92100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.99250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.88400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.99250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.92100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.88400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 ASN A 5 REMARK 465 PHE A 6 REMARK 465 GLN A 7 REMARK 465 ASN A 8 REMARK 465 ILE A 9 REMARK 465 ASP A 10 REMARK 465 LYS A 11 REMARK 465 VAL A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 GLN A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 HIS A 24 REMARK 465 PRO A 25 REMARK 465 PRO A 26 REMARK 465 GLY A 27 REMARK 465 ASP A 28 REMARK 465 PRO A 29 REMARK 465 HIS A 30 REMARK 465 ALA A 31 REMARK 465 VAL A 32 REMARK 465 SER A 33 REMARK 465 PHE A 34 REMARK 465 SER A 35 REMARK 465 LEU A 36 REMARK 465 PRO A 37 REMARK 465 THR A 38 REMARK 465 TRP A 39 REMARK 465 ALA A 40 REMARK 465 SER A 41 REMARK 465 VAL A 42 REMARK 465 ALA A 43 REMARK 465 GLY A 44 REMARK 465 ASN A 45 REMARK 465 MET A 46 REMARK 465 ALA A 47 REMARK 465 GLY A 48 REMARK 465 GLU A 49 REMARK 465 ALA A 50 REMARK 465 TRP A 51 REMARK 465 VAL A 52 REMARK 465 ARG A 53 REMARK 465 GLY A 54 REMARK 465 LYS A 55 REMARK 465 LYS A 56 REMARK 465 LYS A 57 REMARK 465 THR A 58 REMARK 465 THR A 59 REMARK 465 TYR A 60 REMARK 465 PRO A 61 REMARK 465 ARG A 62 REMARK 465 MET A 63 REMARK 465 GLY A 64 REMARK 465 GLU A 144 REMARK 465 GLU A 145 REMARK 465 ASP A 146 REMARK 465 ALA A 147 REMARK 465 PHE A 148 REMARK 465 THR A 149 REMARK 465 TRP A 512 REMARK 465 GLU A 513 REMARK 465 GLU A 514 REMARK 465 GLN A 515 REMARK 465 ASP A 516 REMARK 465 TRP A 517 REMARK 465 ALA A 518 REMARK 465 ALA A 519 REMARK 465 GLU A 520 REMARK 465 TYR A 521 REMARK 465 GLY A 522 REMARK 465 VAL A 523 REMARK 465 ALA A 554 REMARK 465 THR A 555 REMARK 465 LEU A 556 REMARK 465 CYS A 557 REMARK 465 ARG A 558 REMARK 465 THR A 559 REMARK 465 THR A 560 REMARK 465 PHE A 561 REMARK 465 CYS A 562 REMARK 465 LYS A 563 REMARK 465 SER A 564 REMARK 465 GLU A 565 REMARK 465 ARG A 566 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ASP B 3 REMARK 465 PRO B 4 REMARK 465 ASN B 5 REMARK 465 PHE B 6 REMARK 465 GLN B 7 REMARK 465 ASN B 8 REMARK 465 ILE B 9 REMARK 465 ASP B 10 REMARK 465 LYS B 11 REMARK 465 VAL B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 LEU B 15 REMARK 465 GLY B 16 REMARK 465 ALA B 17 REMARK 465 GLN B 18 REMARK 465 PRO B 19 REMARK 465 LEU B 20 REMARK 465 GLY B 21 REMARK 465 SER B 22 REMARK 465 SER B 23 REMARK 465 HIS B 24 REMARK 465 PRO B 25 REMARK 465 PRO B 26 REMARK 465 GLY B 27 REMARK 465 ASP B 28 REMARK 465 PRO B 29 REMARK 465 HIS B 30 REMARK 465 ALA B 31 REMARK 465 VAL B 32 REMARK 465 SER B 33 REMARK 465 PHE B 34 REMARK 465 SER B 35 REMARK 465 LEU B 36 REMARK 465 PRO B 37 REMARK 465 THR B 38 REMARK 465 TRP B 39 REMARK 465 ALA B 40 REMARK 465 SER B 41 REMARK 465 VAL B 42 REMARK 465 ALA B 43 REMARK 465 GLY B 44 REMARK 465 ASN B 45 REMARK 465 MET B 46 REMARK 465 ALA B 47 REMARK 465 GLY B 48 REMARK 465 GLU B 49 REMARK 465 ALA B 50 REMARK 465 TRP B 51 REMARK 465 VAL B 52 REMARK 465 ARG B 53 REMARK 465 GLY B 54 REMARK 465 LYS B 55 REMARK 465 LYS B 56 REMARK 465 LYS B 57 REMARK 465 THR B 58 REMARK 465 THR B 59 REMARK 465 TYR B 60 REMARK 465 PRO B 61 REMARK 465 ARG B 62 REMARK 465 MET B 63 REMARK 465 PRO B 256 REMARK 465 GLY B 257 REMARK 465 ALA B 510 REMARK 465 HIS B 511 REMARK 465 TRP B 512 REMARK 465 GLU B 513 REMARK 465 GLU B 514 REMARK 465 GLN B 515 REMARK 465 ASP B 516 REMARK 465 TRP B 517 REMARK 465 ALA B 518 REMARK 465 ALA B 519 REMARK 465 GLU B 520 REMARK 465 TYR B 521 REMARK 465 GLY B 522 REMARK 465 PRO B 553 REMARK 465 ALA B 554 REMARK 465 THR B 555 REMARK 465 LEU B 556 REMARK 465 CYS B 557 REMARK 465 ARG B 558 REMARK 465 THR B 559 REMARK 465 THR B 560 REMARK 465 PHE B 561 REMARK 465 CYS B 562 REMARK 465 LYS B 563 REMARK 465 SER B 564 REMARK 465 GLU B 565 REMARK 465 ARG B 566 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 PHE A 143 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 ARG A 390 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 470 GLU B 145 CG CD OE1 OE2 REMARK 470 GLU B 223 CG CD OE1 OE2 REMARK 470 MET B 255 CG SD CE REMARK 470 ASP B 258 CG OD1 OD2 REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 ARG B 389 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 153 32.95 -89.43 REMARK 500 HIS A 154 20.81 -71.51 REMARK 500 THR A 315 59.59 78.01 REMARK 500 SER A 316 150.61 -49.42 REMARK 500 LYS A 366 -127.85 -88.81 REMARK 500 ASN A 373 22.27 -145.70 REMARK 500 ASP A 401 99.70 -69.69 REMARK 500 LEU A 509 -7.02 72.18 REMARK 500 THR A 552 115.95 -39.06 REMARK 500 SER B 204 19.59 50.93 REMARK 500 ARG B 221 102.04 -57.46 REMARK 500 ASN B 224 -140.04 50.58 REMARK 500 ALA B 225 -135.86 49.49 REMARK 500 ASP B 226 72.24 -162.07 REMARK 500 LYS B 366 -128.40 -87.19 REMARK 500 ASN B 373 20.22 -148.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 758 DISTANCE = 6.30 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8ZIF RELATED DB: PDB REMARK 900 RELATED ID: 8ZIJ RELATED DB: PDB DBREF 8ZIL A -1 566 PDB 8ZIL 8ZIL -1 566 DBREF 8ZIL B -1 566 PDB 8ZIL 8ZIL -1 566 SEQRES 1 A 568 GLY SER MET ARG ASP PRO ASN PHE GLN ASN ILE ASP LYS SEQRES 2 A 568 VAL ALA LEU LEU GLY ALA GLN PRO LEU GLY SER SER HIS SEQRES 3 A 568 PRO PRO GLY ASP PRO HIS ALA VAL SER PHE SER LEU PRO SEQRES 4 A 568 THR TRP ALA SER VAL ALA GLY ASN MET ALA GLY GLU ALA SEQRES 5 A 568 TRP VAL ARG GLY LYS LYS LYS THR THR TYR PRO ARG MET SEQRES 6 A 568 GLY PHE CYS PRO ILE VAL GLY GLY LEU THR GLU ALA ALA SEQRES 7 A 568 LEU ILE ARG VAL LYS ARG PRO THR GLY VAL LYS ALA ARG SEQRES 8 A 568 ILE PHE ILE SER ARG GLU ALA ALA SER ARG LEU GLU HIS SEQRES 9 A 568 THR VAL LYS VAL LYS ASP PRO ALA ALA LYS VAL SER VAL SEQRES 10 A 568 VAL GLN PHE GLU LEU ARG GLN SER ASN SER PRO ASP LEU SEQRES 11 A 568 SER ASN TRP ALA ARG PHE VAL LEU VAL LEU PHE PRO GLU SEQRES 12 A 568 SER PHE GLU GLU ASP ALA PHE THR PHE TRP LEU ASN HIS SEQRES 13 A 568 GLY ASP GLY ILE SER ASN ARG HIS ALA GLU PHE CYS ASN SEQRES 14 A 568 ASN LEU LEU ASP PHE MET ASP SER ARG CYS ASP GLU ASP SEQRES 15 A 568 GLU PRO ASP TYR GLN THR CYS GLY PRO ARG SER GLY ASP SEQRES 16 A 568 LYS PRO ALA GLY LEU PRO THR TRP THR ASN SER GLY LEU SEQRES 17 A 568 GLU GLU LYS MET VAL ILE LYS SER VAL LEU ALA LYS CYS SEQRES 18 A 568 ILE ARG SER GLU ASN ALA ASP MET LEU PRO VAL GLN SER SEQRES 19 A 568 ASP ASP VAL PHE LEU TYR SER THR GLY MET MET ALA ILE SEQRES 20 A 568 GLY LYS ILE ALA ARG ALA MET LYS ASP MET PRO GLY ASP SEQRES 21 A 568 ASP THR ALA VAL ILE PHE GLY TRP LEU TYR SER GLY THR SEQRES 22 A 568 LEU PRO LEU VAL LYS ASP SER GLY TYR SER LYS PRO ILE SEQRES 23 A 568 LEU TYR GLY ARG GLY THR GLU GLU GLU LEU ASP LYS LEU SEQRES 24 A 568 GLU SER TYR LEU ALA ALA GLY GLY LYS CYS THR VAL LEU SEQRES 25 A 568 PHE THR GLU ILE THR SER ASN PRO GLN LEU HIS SER PRO SEQRES 26 A 568 ASN LEU VAL ARG ILE LYS ASN LEU ALA ASP GLU TYR GLY SEQRES 27 A 568 PHE THR VAL VAL VAL ASP ASP THR ILE GLY THR SER VAL SEQRES 28 A 568 ASN LEU ASP ILE LEU PRO TYR ALA ASP VAL VAL THR THR SEQRES 29 A 568 SER LEU THR LYS ILE PHE ASN GLY ALA CYS ASN ALA MET SEQRES 30 A 568 GLY GLY SER LEU ILE VAL ASN PRO ASN SER ARG HIS TYR SEQRES 31 A 568 ARG ARG ILE HIS THR TYR LEU GLN GLY HIS PHE GLU ASP SEQRES 32 A 568 LEU LEU PHE PRO ALA ASP ALA VAL VAL LEU SER GLU ASN SEQRES 33 A 568 CYS ILE ASP TYR PRO GLU ARG VAL LYS ARG CYS SER ALA SEQRES 34 A 568 THR ALA ARG ALA ILE ALA HIS PHE LEU ALA ALA HIS PRO SEQRES 35 A 568 SER ILE ASP TYR VAL ASN TYR PRO THR LEU VAL PRO SER SEQRES 36 A 568 ARG GLU GLU TYR GLU ARG TYR ARG ARG ASP GLY GLU GLY SEQRES 37 A 568 TYR GLY TYR LEU LEU SER ILE VAL PHE ARG GLU PRO ASP SEQRES 38 A 568 PHE ALA VAL ARG PHE PHE ASP ALA LEU ASP ILE TRP LYS SEQRES 39 A 568 GLY PRO SER ILE GLY THR ASN SER SER ILE ALA LEU PRO SEQRES 40 A 568 TYR SER VAL LEU ALA HIS TRP GLU GLU GLN ASP TRP ALA SEQRES 41 A 568 ALA GLU TYR GLY VAL PRO LYS HIS ILE VAL ARG LEU SER SEQRES 42 A 568 VAL GLY LEU GLU SER GLU ALA TRP LEU ARG ASP ARG VAL SEQRES 43 A 568 THR GLU ALA LEU ALA LYS ALA THR PRO ALA THR LEU CYS SEQRES 44 A 568 ARG THR THR PHE CYS LYS SER GLU ARG SEQRES 1 B 568 GLY SER MET ARG ASP PRO ASN PHE GLN ASN ILE ASP LYS SEQRES 2 B 568 VAL ALA LEU LEU GLY ALA GLN PRO LEU GLY SER SER HIS SEQRES 3 B 568 PRO PRO GLY ASP PRO HIS ALA VAL SER PHE SER LEU PRO SEQRES 4 B 568 THR TRP ALA SER VAL ALA GLY ASN MET ALA GLY GLU ALA SEQRES 5 B 568 TRP VAL ARG GLY LYS LYS LYS THR THR TYR PRO ARG MET SEQRES 6 B 568 GLY PHE CYS PRO ILE VAL GLY GLY LEU THR GLU ALA ALA SEQRES 7 B 568 LEU ILE ARG VAL LYS ARG PRO THR GLY VAL LYS ALA ARG SEQRES 8 B 568 ILE PHE ILE SER ARG GLU ALA ALA SER ARG LEU GLU HIS SEQRES 9 B 568 THR VAL LYS VAL LYS ASP PRO ALA ALA LYS VAL SER VAL SEQRES 10 B 568 VAL GLN PHE GLU LEU ARG GLN SER ASN SER PRO ASP LEU SEQRES 11 B 568 SER ASN TRP ALA ARG PHE VAL LEU VAL LEU PHE PRO GLU SEQRES 12 B 568 SER PHE GLU GLU ASP ALA PHE THR PHE TRP LEU ASN HIS SEQRES 13 B 568 GLY ASP GLY ILE SER ASN ARG HIS ALA GLU PHE CYS ASN SEQRES 14 B 568 ASN LEU LEU ASP PHE MET ASP SER ARG CYS ASP GLU ASP SEQRES 15 B 568 GLU PRO ASP TYR GLN THR CYS GLY PRO ARG SER GLY ASP SEQRES 16 B 568 LYS PRO ALA GLY LEU PRO THR TRP THR ASN SER GLY LEU SEQRES 17 B 568 GLU GLU LYS MET VAL ILE LYS SER VAL LEU ALA LYS CYS SEQRES 18 B 568 ILE ARG SER GLU ASN ALA ASP MET LEU PRO VAL GLN SER SEQRES 19 B 568 ASP ASP VAL PHE LEU TYR SER THR GLY MET MET ALA ILE SEQRES 20 B 568 GLY LYS ILE ALA ARG ALA MET LYS ASP MET PRO GLY ASP SEQRES 21 B 568 ASP THR ALA VAL ILE PHE GLY TRP LEU TYR SER GLY THR SEQRES 22 B 568 LEU PRO LEU VAL LYS ASP SER GLY TYR SER LYS PRO ILE SEQRES 23 B 568 LEU TYR GLY ARG GLY THR GLU GLU GLU LEU ASP LYS LEU SEQRES 24 B 568 GLU SER TYR LEU ALA ALA GLY GLY LYS CYS THR VAL LEU SEQRES 25 B 568 PHE THR GLU ILE THR SER ASN PRO GLN LEU HIS SER PRO SEQRES 26 B 568 ASN LEU VAL ARG ILE LYS ASN LEU ALA ASP GLU TYR GLY SEQRES 27 B 568 PHE THR VAL VAL VAL ASP ASP THR ILE GLY THR SER VAL SEQRES 28 B 568 ASN LEU ASP ILE LEU PRO TYR ALA ASP VAL VAL THR THR SEQRES 29 B 568 SER LEU THR LYS ILE PHE ASN GLY ALA CYS ASN ALA MET SEQRES 30 B 568 GLY GLY SER LEU ILE VAL ASN PRO ASN SER ARG HIS TYR SEQRES 31 B 568 ARG ARG ILE HIS THR TYR LEU GLN GLY HIS PHE GLU ASP SEQRES 32 B 568 LEU LEU PHE PRO ALA ASP ALA VAL VAL LEU SER GLU ASN SEQRES 33 B 568 CYS ILE ASP TYR PRO GLU ARG VAL LYS ARG CYS SER ALA SEQRES 34 B 568 THR ALA ARG ALA ILE ALA HIS PHE LEU ALA ALA HIS PRO SEQRES 35 B 568 SER ILE ASP TYR VAL ASN TYR PRO THR LEU VAL PRO SER SEQRES 36 B 568 ARG GLU GLU TYR GLU ARG TYR ARG ARG ASP GLY GLU GLY SEQRES 37 B 568 TYR GLY TYR LEU LEU SER ILE VAL PHE ARG GLU PRO ASP SEQRES 38 B 568 PHE ALA VAL ARG PHE PHE ASP ALA LEU ASP ILE TRP LYS SEQRES 39 B 568 GLY PRO SER ILE GLY THR ASN SER SER ILE ALA LEU PRO SEQRES 40 B 568 TYR SER VAL LEU ALA HIS TRP GLU GLU GLN ASP TRP ALA SEQRES 41 B 568 ALA GLU TYR GLY VAL PRO LYS HIS ILE VAL ARG LEU SER SEQRES 42 B 568 VAL GLY LEU GLU SER GLU ALA TRP LEU ARG ASP ARG VAL SEQRES 43 B 568 THR GLU ALA LEU ALA LYS ALA THR PRO ALA THR LEU CYS SEQRES 44 B 568 ARG THR THR PHE CYS LYS SER GLU ARG HET PO4 A 601 5 HET EAC A 602 9 HET PO4 B 601 5 HETNAM PO4 PHOSPHATE ION HETNAM EAC ETHYL 3-OXOBUTANOATE FORMUL 3 PO4 2(O4 P 3-) FORMUL 4 EAC C6 H10 O3 FORMUL 6 HOH *98(H2 O) HELIX 1 AA1 GLY A 71 VAL A 80 1 10 HELIX 2 AA2 SER A 93 VAL A 106 1 14 HELIX 3 AA3 SER A 125 ALA A 132 1 8 HELIX 4 AA4 SER A 159 LEU A 169 1 11 HELIX 5 AA5 LEU A 170 MET A 173 5 4 HELIX 6 AA6 GLU A 181 GLN A 185 5 5 HELIX 7 AA7 THR A 202 SER A 204 5 3 HELIX 8 AA8 GLY A 205 CYS A 219 1 15 HELIX 9 AA9 GLN A 231 ASP A 233 5 3 HELIX 10 AB1 THR A 240 MET A 255 1 16 HELIX 11 AB2 GLY A 270 SER A 278 1 9 HELIX 12 AB3 THR A 290 ALA A 303 1 14 HELIX 13 AB4 ASN A 324 GLY A 336 1 13 HELIX 14 AB5 ILE A 353 ALA A 357 5 5 HELIX 15 AB6 HIS A 387 HIS A 398 1 12 HELIX 16 AB7 PHE A 404 CYS A 415 1 12 HELIX 17 AB8 ASP A 417 ALA A 438 1 22 HELIX 18 AB9 SER A 453 ARG A 459 1 7 HELIX 19 AC1 GLU A 477 LEU A 488 1 12 HELIX 20 AC2 SER A 536 THR A 552 1 17 HELIX 21 AC3 GLY B 71 VAL B 80 1 10 HELIX 22 AC4 SER B 93 ASP B 108 1 16 HELIX 23 AC5 SER B 125 ALA B 132 1 8 HELIX 24 AC6 ASP B 146 GLY B 155 1 10 HELIX 25 AC7 SER B 159 LEU B 169 1 11 HELIX 26 AC8 LEU B 170 MET B 173 5 4 HELIX 27 AC9 GLU B 181 GLN B 185 5 5 HELIX 28 AD1 THR B 202 SER B 204 5 3 HELIX 29 AD2 GLY B 205 CYS B 219 1 15 HELIX 30 AD3 GLN B 231 ASP B 233 5 3 HELIX 31 AD4 THR B 240 LYS B 253 1 14 HELIX 32 AD5 GLY B 270 GLY B 279 1 10 HELIX 33 AD6 THR B 290 ALA B 303 1 14 HELIX 34 AD7 ASN B 324 GLY B 336 1 13 HELIX 35 AD8 ILE B 353 ALA B 357 5 5 HELIX 36 AD9 HIS B 387 HIS B 398 1 12 HELIX 37 AE1 PHE B 404 CYS B 415 1 12 HELIX 38 AE2 ASP B 417 ALA B 438 1 22 HELIX 39 AE3 SER B 453 ARG B 461 1 9 HELIX 40 AE4 GLU B 477 LEU B 488 1 12 HELIX 41 AE5 SER B 536 THR B 552 1 17 SHEET 1 AA1 4 VAL A 86 PHE A 91 0 SHEET 2 AA1 4 ARG A 133 PRO A 140 -1 O VAL A 135 N PHE A 91 SHEET 3 AA1 4 SER A 114 GLU A 119 -1 N VAL A 116 O LEU A 136 SHEET 4 AA1 4 ASP A 174 CYS A 177 -1 O ASP A 174 N GLU A 119 SHEET 1 AA2 7 VAL A 235 TYR A 238 0 SHEET 2 AA2 7 GLY A 377 VAL A 381 -1 O GLY A 377 N TYR A 238 SHEET 3 AA2 7 VAL A 359 SER A 363 -1 N VAL A 360 O ILE A 380 SHEET 4 AA2 7 THR A 338 ASP A 342 1 N VAL A 341 O VAL A 359 SHEET 5 AA2 7 VAL A 309 GLU A 313 1 N LEU A 310 O THR A 338 SHEET 6 AA2 7 ALA A 261 PHE A 264 1 N VAL A 262 O PHE A 311 SHEET 7 AA2 7 ILE A 284 TYR A 286 1 O TYR A 286 N ILE A 263 SHEET 1 AA3 5 ILE A 442 ASN A 446 0 SHEET 2 AA3 5 LEU A 470 PHE A 475 -1 O SER A 472 N ASN A 446 SHEET 3 AA3 5 VAL A 528 SER A 531 -1 O LEU A 530 N LEU A 471 SHEET 4 AA3 5 ILE A 502 LEU A 504 -1 N ILE A 502 O SER A 531 SHEET 5 AA3 5 TRP A 491 LYS A 492 1 N TRP A 491 O ALA A 503 SHEET 1 AA4 4 VAL B 86 PHE B 91 0 SHEET 2 AA4 4 ARG B 133 PRO B 140 -1 O VAL B 135 N PHE B 91 SHEET 3 AA4 4 SER B 114 GLU B 119 -1 N VAL B 116 O LEU B 136 SHEET 4 AA4 4 ASP B 174 CYS B 177 -1 O ASP B 174 N GLU B 119 SHEET 1 AA5 7 VAL B 235 TYR B 238 0 SHEET 2 AA5 7 GLY B 377 VAL B 381 -1 O LEU B 379 N PHE B 236 SHEET 3 AA5 7 VAL B 359 SER B 363 -1 N THR B 362 O SER B 378 SHEET 4 AA5 7 THR B 338 ASP B 342 1 N VAL B 341 O VAL B 359 SHEET 5 AA5 7 VAL B 309 GLU B 313 1 N LEU B 310 O VAL B 340 SHEET 6 AA5 7 THR B 260 PHE B 264 1 N VAL B 262 O PHE B 311 SHEET 7 AA5 7 LYS B 282 TYR B 286 1 O TYR B 286 N ILE B 263 SHEET 1 AA6 5 ILE B 442 ASN B 446 0 SHEET 2 AA6 5 LEU B 470 PHE B 475 -1 O SER B 472 N ASN B 446 SHEET 3 AA6 5 VAL B 528 SER B 531 -1 O LEU B 530 N LEU B 471 SHEET 4 AA6 5 ILE B 502 LEU B 504 -1 N ILE B 502 O SER B 531 SHEET 5 AA6 5 TRP B 491 LYS B 492 1 N TRP B 491 O ALA B 503 SSBOND 1 CYS A 66 CYS B 372 1555 1555 2.05 SSBOND 2 CYS A 372 CYS B 66 1555 1555 2.02 CISPEP 1 CYS A 66 PRO A 67 0 10.62 CISPEP 2 ASN A 317 PRO A 318 0 1.42 CISPEP 3 CYS B 66 PRO B 67 0 -2.27 CISPEP 4 ASN B 317 PRO B 318 0 -1.95 CRYST1 85.842 101.768 127.985 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011649 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009826 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007813 0.00000 CONECT 17 6003 CONECT 2307 3677 CONECT 3677 2307 CONECT 6003 17 CONECT 7338 7339 7340 7341 7342 CONECT 7339 7338 CONECT 7340 7338 CONECT 7341 7338 CONECT 7342 7338 CONECT 7343 7344 CONECT 7344 7343 7345 CONECT 7345 7344 7346 CONECT 7346 7345 7347 7351 CONECT 7347 7346 CONECT 7348 7349 CONECT 7349 7348 7350 7351 CONECT 7350 7349 CONECT 7351 7346 7349 CONECT 7352 7353 7354 7355 7356 CONECT 7353 7352 CONECT 7354 7352 CONECT 7355 7352 CONECT 7356 7352 MASTER 472 0 3 41 32 0 0 6 7452 2 23 88 END