data_8ZM0 # _entry.id 8ZM0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ZM0 pdb_00008zm0 10.2210/pdb8zm0/pdb WWPDB D_1300047957 ? ? EMDB EMD-60234 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-05-21 ? 2 'EM metadata' 1 0 2025-05-21 ? 3 'Half map' 1 0 2025-05-21 1 4 'Half map' 1 0 2025-05-21 2 5 Image 1 0 2025-05-21 ? 6 'Primary map' 1 0 2025-05-21 ? 7 'Structure model' 1 1 2025-12-24 ? 8 'EM metadata' 2 0 2025-12-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 7 'Structure model' 'Data collection' 2 7 'Structure model' 'Database references' 3 8 'EM metadata' 'Database references' 4 8 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 7 'Structure model' citation 2 7 'Structure model' citation_author 3 7 'Structure model' em_admin 4 8 'EM metadata' citation 5 8 'EM metadata' citation_author 6 8 'EM metadata' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 7 'Structure model' '_citation.country' 2 7 'Structure model' '_citation.journal_abbrev' 3 7 'Structure model' '_citation.journal_id_CSD' 4 7 'Structure model' '_citation.journal_id_ISSN' 5 7 'Structure model' '_citation.journal_volume' 6 7 'Structure model' '_citation.page_first' 7 7 'Structure model' '_citation.page_last' 8 7 'Structure model' '_citation.pdbx_database_id_DOI' 9 7 'Structure model' '_citation.pdbx_database_id_PubMed' 10 7 'Structure model' '_citation.title' 11 7 'Structure model' '_citation.year' 12 7 'Structure model' '_em_admin.last_update' 13 8 'EM metadata' '_citation.country' 14 8 'EM metadata' '_citation.journal_abbrev' 15 8 'EM metadata' '_citation.journal_id_CSD' 16 8 'EM metadata' '_citation.journal_id_ISSN' 17 8 'EM metadata' '_citation.journal_volume' 18 8 'EM metadata' '_citation.page_first' 19 8 'EM metadata' '_citation.page_last' 20 8 'EM metadata' '_citation.pdbx_database_id_DOI' 21 8 'EM metadata' '_citation.pdbx_database_id_PubMed' 22 8 'EM metadata' '_citation.title' 23 8 'EM metadata' '_citation.year' 24 8 'EM metadata' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ZM0 _pdbx_database_status.recvd_initial_deposition_date 2024-05-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'A self-assembled nanofiber' _pdbx_database_related.db_id EMD-60234 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 madan@westlake.edu.cn Dan Ma ? 'principal investigator/group leader' 0000-0002-6208-2262 4 wanghuaimin@westlake.edu.cn Huaimin Wang ? 'principal investigator/group leader' 0000-0002-8796-0367 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shi, J.H.' 1 ? 'Fang, Y.' 2 ? 'Ma, D.' 3 ? 'Wang, H.M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 1058 _citation.page_last 1058 _citation.title 'Water-regulated viscosity-plasticity phase transitions in a peptide self-assembled muscle-like hydrogel.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-56415-7 _citation.pdbx_database_id_PubMed 39865087 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fang, Y.' 1 0000-0002-7536-7099 primary 'Shi, J.' 2 ? primary 'Liang, J.' 3 ? primary 'Ma, D.' 4 0000-0002-6208-2262 primary 'Wang, H.' 5 0000-0002-8796-0367 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description TYR-ALA-TRP-PHE _entity.formula_weight 585.650 _entity.pdbx_number_of_molecules 62 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code YAWF _entity_poly.pdbx_seq_one_letter_code_can YAWF _entity_poly.pdbx_strand_id a,b,d,f,g,s,B,N,h,n,t,z,C,I,O,i,o,u,0,D,J,P,j,p,v,1,k,S,T,V,Y,6,7,A,G,M,U,m,9,y,H,5,W,4,X,Z,E,K,Q,c,8,q,w,2,F,L,R,e,l,r,x,3 _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 ALA n 1 3 TRP n 1 4 PHE n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 208 208 TYR TYR a . n A 1 2 ALA 2 209 209 ALA ALA a . n A 1 3 TRP 3 210 210 TRP TRP a . n A 1 4 PHE 4 211 211 PHE PHE a . n B 1 1 TYR 1 208 208 TYR TYR b . n B 1 2 ALA 2 209 209 ALA ALA b . n B 1 3 TRP 3 210 210 TRP TRP b . n B 1 4 PHE 4 211 211 PHE PHE b . n C 1 1 TYR 1 208 208 TYR TYR d . n C 1 2 ALA 2 209 209 ALA ALA d . n C 1 3 TRP 3 210 210 TRP TRP d . n C 1 4 PHE 4 211 211 PHE PHE d . n D 1 1 TYR 1 208 208 TYR TYR f . n D 1 2 ALA 2 209 209 ALA ALA f . n D 1 3 TRP 3 210 210 TRP TRP f . n D 1 4 PHE 4 211 211 PHE PHE f . n E 1 1 TYR 1 208 208 TYR TYR g . n E 1 2 ALA 2 209 209 ALA ALA g . n E 1 3 TRP 3 210 210 TRP TRP g . n E 1 4 PHE 4 211 211 PHE PHE g . n F 1 1 TYR 1 208 208 TYR TYR s . n F 1 2 ALA 2 209 209 ALA ALA s . n F 1 3 TRP 3 210 210 TRP TRP s . n F 1 4 PHE 4 211 211 PHE PHE s . n G 1 1 TYR 1 208 208 TYR TYR B . n G 1 2 ALA 2 209 209 ALA ALA B . n G 1 3 TRP 3 210 210 TRP TRP B . n G 1 4 PHE 4 211 211 PHE PHE B . n H 1 1 TYR 1 208 208 TYR TYR N . n H 1 2 ALA 2 209 209 ALA ALA N . n H 1 3 TRP 3 210 210 TRP TRP N . n H 1 4 PHE 4 211 211 PHE PHE N . n I 1 1 TYR 1 208 208 TYR TYR h . n I 1 2 ALA 2 209 209 ALA ALA h . n I 1 3 TRP 3 210 210 TRP TRP h . n I 1 4 PHE 4 211 211 PHE PHE h . n J 1 1 TYR 1 208 208 TYR TYR n . n J 1 2 ALA 2 209 209 ALA ALA n . n J 1 3 TRP 3 210 210 TRP TRP n . n J 1 4 PHE 4 211 211 PHE PHE n . n K 1 1 TYR 1 208 208 TYR TYR t . n K 1 2 ALA 2 209 209 ALA ALA t . n K 1 3 TRP 3 210 210 TRP TRP t . n K 1 4 PHE 4 211 211 PHE PHE t . n L 1 1 TYR 1 208 208 TYR TYR z . n L 1 2 ALA 2 209 209 ALA ALA z . n L 1 3 TRP 3 210 210 TRP TRP z . n L 1 4 PHE 4 211 211 PHE PHE z . n M 1 1 TYR 1 208 208 TYR TYR C . n M 1 2 ALA 2 209 209 ALA ALA C . n M 1 3 TRP 3 210 210 TRP TRP C . n M 1 4 PHE 4 211 211 PHE PHE C . n N 1 1 TYR 1 208 208 TYR TYR I . n N 1 2 ALA 2 209 209 ALA ALA I . n N 1 3 TRP 3 210 210 TRP TRP I . n N 1 4 PHE 4 211 211 PHE PHE I . n O 1 1 TYR 1 208 208 TYR TYR O . n O 1 2 ALA 2 209 209 ALA ALA O . n O 1 3 TRP 3 210 210 TRP TRP O . n O 1 4 PHE 4 211 211 PHE PHE O . n P 1 1 TYR 1 208 208 TYR TYR i . n P 1 2 ALA 2 209 209 ALA ALA i . n P 1 3 TRP 3 210 210 TRP TRP i . n P 1 4 PHE 4 211 211 PHE PHE i . n Q 1 1 TYR 1 208 208 TYR TYR o . n Q 1 2 ALA 2 209 209 ALA ALA o . n Q 1 3 TRP 3 210 210 TRP TRP o . n Q 1 4 PHE 4 211 211 PHE PHE o . n R 1 1 TYR 1 208 208 TYR TYR u . n R 1 2 ALA 2 209 209 ALA ALA u . n R 1 3 TRP 3 210 210 TRP TRP u . n R 1 4 PHE 4 211 211 PHE PHE u . n S 1 1 TYR 1 208 208 TYR TYR 0 . n S 1 2 ALA 2 209 209 ALA ALA 0 . n S 1 3 TRP 3 210 210 TRP TRP 0 . n S 1 4 PHE 4 211 211 PHE PHE 0 . n T 1 1 TYR 1 208 208 TYR TYR D . n T 1 2 ALA 2 209 209 ALA ALA D . n T 1 3 TRP 3 210 210 TRP TRP D . n T 1 4 PHE 4 211 211 PHE PHE D . n U 1 1 TYR 1 208 208 TYR TYR J . n U 1 2 ALA 2 209 209 ALA ALA J . n U 1 3 TRP 3 210 210 TRP TRP J . n U 1 4 PHE 4 211 211 PHE PHE J . n V 1 1 TYR 1 208 208 TYR TYR P . n V 1 2 ALA 2 209 209 ALA ALA P . n V 1 3 TRP 3 210 210 TRP TRP P . n V 1 4 PHE 4 211 211 PHE PHE P . n W 1 1 TYR 1 208 208 TYR TYR j . n W 1 2 ALA 2 209 209 ALA ALA j . n W 1 3 TRP 3 210 210 TRP TRP j . n W 1 4 PHE 4 211 211 PHE PHE j . n X 1 1 TYR 1 208 208 TYR TYR p . n X 1 2 ALA 2 209 209 ALA ALA p . n X 1 3 TRP 3 210 210 TRP TRP p . n X 1 4 PHE 4 211 211 PHE PHE p . n Y 1 1 TYR 1 208 208 TYR TYR v . n Y 1 2 ALA 2 209 209 ALA ALA v . n Y 1 3 TRP 3 210 210 TRP TRP v . n Y 1 4 PHE 4 211 211 PHE PHE v . n Z 1 1 TYR 1 208 208 TYR TYR 1 . n Z 1 2 ALA 2 209 209 ALA ALA 1 . n Z 1 3 TRP 3 210 210 TRP TRP 1 . n Z 1 4 PHE 4 211 211 PHE PHE 1 . n AA 1 1 TYR 1 208 208 TYR TYR k . n AA 1 2 ALA 2 209 209 ALA ALA k . n AA 1 3 TRP 3 210 210 TRP TRP k . n AA 1 4 PHE 4 211 211 PHE PHE k . n BA 1 1 TYR 1 208 208 TYR TYR S . n BA 1 2 ALA 2 209 209 ALA ALA S . n BA 1 3 TRP 3 210 210 TRP TRP S . n BA 1 4 PHE 4 211 211 PHE PHE S . n CA 1 1 TYR 1 208 208 TYR TYR T . n CA 1 2 ALA 2 209 209 ALA ALA T . n CA 1 3 TRP 3 210 210 TRP TRP T . n CA 1 4 PHE 4 211 211 PHE PHE T . n DA 1 1 TYR 1 208 208 TYR TYR V . n DA 1 2 ALA 2 209 209 ALA ALA V . n DA 1 3 TRP 3 210 210 TRP TRP V . n DA 1 4 PHE 4 211 211 PHE PHE V . n EA 1 1 TYR 1 208 208 TYR TYR Y . n EA 1 2 ALA 2 209 209 ALA ALA Y . n EA 1 3 TRP 3 210 210 TRP TRP Y . n EA 1 4 PHE 4 211 211 PHE PHE Y . n FA 1 1 TYR 1 208 208 TYR TYR 6 . n FA 1 2 ALA 2 209 209 ALA ALA 6 . n FA 1 3 TRP 3 210 210 TRP TRP 6 . n FA 1 4 PHE 4 211 211 PHE PHE 6 . n GA 1 1 TYR 1 208 208 TYR TYR 7 . n GA 1 2 ALA 2 209 209 ALA ALA 7 . n GA 1 3 TRP 3 210 210 TRP TRP 7 . n GA 1 4 PHE 4 211 211 PHE PHE 7 . n HA 1 1 TYR 1 208 208 TYR TYR A . n HA 1 2 ALA 2 209 209 ALA ALA A . n HA 1 3 TRP 3 210 210 TRP TRP A . n HA 1 4 PHE 4 211 211 PHE PHE A . n IA 1 1 TYR 1 208 208 TYR TYR G . n IA 1 2 ALA 2 209 209 ALA ALA G . n IA 1 3 TRP 3 210 210 TRP TRP G . n IA 1 4 PHE 4 211 211 PHE PHE G . n JA 1 1 TYR 1 208 208 TYR TYR M . n JA 1 2 ALA 2 209 209 ALA ALA M . n JA 1 3 TRP 3 210 210 TRP TRP M . n JA 1 4 PHE 4 211 211 PHE PHE M . n KA 1 1 TYR 1 208 208 TYR TYR U . n KA 1 2 ALA 2 209 209 ALA ALA U . n KA 1 3 TRP 3 210 210 TRP TRP U . n KA 1 4 PHE 4 211 211 PHE PHE U . n LA 1 1 TYR 1 208 208 TYR TYR m . n LA 1 2 ALA 2 209 209 ALA ALA m . n LA 1 3 TRP 3 210 210 TRP TRP m . n LA 1 4 PHE 4 211 211 PHE PHE m . n MA 1 1 TYR 1 208 208 TYR TYR 9 . n MA 1 2 ALA 2 209 209 ALA ALA 9 . n MA 1 3 TRP 3 210 210 TRP TRP 9 . n MA 1 4 PHE 4 211 211 PHE PHE 9 . n NA 1 1 TYR 1 208 208 TYR TYR y . n NA 1 2 ALA 2 209 209 ALA ALA y . n NA 1 3 TRP 3 210 210 TRP TRP y . n NA 1 4 PHE 4 211 211 PHE PHE y . n OA 1 1 TYR 1 208 208 TYR TYR H . n OA 1 2 ALA 2 209 209 ALA ALA H . n OA 1 3 TRP 3 210 210 TRP TRP H . n OA 1 4 PHE 4 211 211 PHE PHE H . n PA 1 1 TYR 1 208 208 TYR TYR 5 . n PA 1 2 ALA 2 209 209 ALA ALA 5 . n PA 1 3 TRP 3 210 210 TRP TRP 5 . n PA 1 4 PHE 4 211 211 PHE PHE 5 . n QA 1 1 TYR 1 208 208 TYR TYR W . n QA 1 2 ALA 2 209 209 ALA ALA W . n QA 1 3 TRP 3 210 210 TRP TRP W . n QA 1 4 PHE 4 211 211 PHE PHE W . n RA 1 1 TYR 1 208 208 TYR TYR 4 . n RA 1 2 ALA 2 209 209 ALA ALA 4 . n RA 1 3 TRP 3 210 210 TRP TRP 4 . n RA 1 4 PHE 4 211 211 PHE PHE 4 . n SA 1 1 TYR 1 208 208 TYR TYR X . n SA 1 2 ALA 2 209 209 ALA ALA X . n SA 1 3 TRP 3 210 210 TRP TRP X . n SA 1 4 PHE 4 211 211 PHE PHE X . n TA 1 1 TYR 1 208 208 TYR TYR Z . n TA 1 2 ALA 2 209 209 ALA ALA Z . n TA 1 3 TRP 3 210 210 TRP TRP Z . n TA 1 4 PHE 4 211 211 PHE PHE Z . n UA 1 1 TYR 1 208 208 TYR TYR E . n UA 1 2 ALA 2 209 209 ALA ALA E . n UA 1 3 TRP 3 210 210 TRP TRP E . n UA 1 4 PHE 4 211 211 PHE PHE E . n VA 1 1 TYR 1 208 208 TYR TYR K . n VA 1 2 ALA 2 209 209 ALA ALA K . n VA 1 3 TRP 3 210 210 TRP TRP K . n VA 1 4 PHE 4 211 211 PHE PHE K . n WA 1 1 TYR 1 208 208 TYR TYR Q . n WA 1 2 ALA 2 209 209 ALA ALA Q . n WA 1 3 TRP 3 210 210 TRP TRP Q . n WA 1 4 PHE 4 211 211 PHE PHE Q . n XA 1 1 TYR 1 208 208 TYR TYR c . n XA 1 2 ALA 2 209 209 ALA ALA c . n XA 1 3 TRP 3 210 210 TRP TRP c . n XA 1 4 PHE 4 211 211 PHE PHE c . n YA 1 1 TYR 1 208 208 TYR TYR 8 . n YA 1 2 ALA 2 209 209 ALA ALA 8 . n YA 1 3 TRP 3 210 210 TRP TRP 8 . n YA 1 4 PHE 4 211 211 PHE PHE 8 . n ZA 1 1 TYR 1 208 208 TYR TYR q . n ZA 1 2 ALA 2 209 209 ALA ALA q . n ZA 1 3 TRP 3 210 210 TRP TRP q . n ZA 1 4 PHE 4 211 211 PHE PHE q . n AB 1 1 TYR 1 208 208 TYR TYR w . n AB 1 2 ALA 2 209 209 ALA ALA w . n AB 1 3 TRP 3 210 210 TRP TRP w . n AB 1 4 PHE 4 211 211 PHE PHE w . n BB 1 1 TYR 1 208 208 TYR TYR 2 . n BB 1 2 ALA 2 209 209 ALA ALA 2 . n BB 1 3 TRP 3 210 210 TRP TRP 2 . n BB 1 4 PHE 4 211 211 PHE PHE 2 . n CB 1 1 TYR 1 208 208 TYR TYR F . n CB 1 2 ALA 2 209 209 ALA ALA F . n CB 1 3 TRP 3 210 210 TRP TRP F . n CB 1 4 PHE 4 211 211 PHE PHE F . n DB 1 1 TYR 1 208 208 TYR TYR L . n DB 1 2 ALA 2 209 209 ALA ALA L . n DB 1 3 TRP 3 210 210 TRP TRP L . n DB 1 4 PHE 4 211 211 PHE PHE L . n EB 1 1 TYR 1 208 208 TYR TYR R . n EB 1 2 ALA 2 209 209 ALA ALA R . n EB 1 3 TRP 3 210 210 TRP TRP R . n EB 1 4 PHE 4 211 211 PHE PHE R . n FB 1 1 TYR 1 208 208 TYR TYR e . n FB 1 2 ALA 2 209 209 ALA ALA e . n FB 1 3 TRP 3 210 210 TRP TRP e . n FB 1 4 PHE 4 211 211 PHE PHE e . n GB 1 1 TYR 1 208 208 TYR TYR l . n GB 1 2 ALA 2 209 209 ALA ALA l . n GB 1 3 TRP 3 210 210 TRP TRP l . n GB 1 4 PHE 4 211 211 PHE PHE l . n HB 1 1 TYR 1 208 208 TYR TYR r . n HB 1 2 ALA 2 209 209 ALA ALA r . n HB 1 3 TRP 3 210 210 TRP TRP r . n HB 1 4 PHE 4 211 211 PHE PHE r . n IB 1 1 TYR 1 208 208 TYR TYR x . n IB 1 2 ALA 2 209 209 ALA ALA x . n IB 1 3 TRP 3 210 210 TRP TRP x . n IB 1 4 PHE 4 211 211 PHE PHE x . n JB 1 1 TYR 1 208 208 TYR TYR 3 . n JB 1 2 ALA 2 209 209 ALA ALA 3 . n JB 1 3 TRP 3 210 210 TRP TRP 3 . n JB 1 4 PHE 4 211 211 PHE PHE 3 . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ZM0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8ZM0 _struct.title 'A self-assembled nanofiber' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ZM0 _struct_keywords.text 'A chemically synthesized peptide that can be self-assembled into nanofiber, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 1 ? Q N N 1 ? R N N 1 ? S N N 1 ? T N N 1 ? U N N 1 ? V N N 1 ? W N N 1 ? X N N 1 ? Y N N 1 ? Z N N 1 ? AA N N 1 ? BA N N 1 ? CA N N 1 ? DA N N 1 ? EA N N 1 ? FA N N 1 ? GA N N 1 ? HA N N 1 ? IA N N 1 ? JA N N 1 ? KA N N 1 ? LA N N 1 ? MA N N 1 ? NA N N 1 ? OA N N 1 ? PA N N 1 ? QA N N 1 ? RA N N 1 ? SA N N 1 ? TA N N 1 ? UA N N 1 ? VA N N 1 ? WA N N 1 ? XA N N 1 ? YA N N 1 ? ZA N N 1 ? AB N N 1 ? BB N N 1 ? CB N N 1 ? DB N N 1 ? EB N N 1 ? FB N N 1 ? GB N N 1 ? HB N N 1 ? IB N N 1 ? JB N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8ZM0 _struct_ref.pdbx_db_accession 8ZM0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8ZM0 a 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 2 1 8ZM0 b 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 3 1 8ZM0 d 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 4 1 8ZM0 f 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 5 1 8ZM0 g 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 6 1 8ZM0 s 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 7 1 8ZM0 B 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 8 1 8ZM0 N 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 9 1 8ZM0 h 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 10 1 8ZM0 n 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 11 1 8ZM0 t 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 12 1 8ZM0 z 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 13 1 8ZM0 C 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 14 1 8ZM0 I 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 15 1 8ZM0 O 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 16 1 8ZM0 i 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 17 1 8ZM0 o 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 18 1 8ZM0 u 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 19 1 8ZM0 0 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 20 1 8ZM0 D 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 21 1 8ZM0 J 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 22 1 8ZM0 P 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 23 1 8ZM0 j 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 24 1 8ZM0 p 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 25 1 8ZM0 v 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 26 1 8ZM0 1 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 27 1 8ZM0 k 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 28 1 8ZM0 S 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 29 1 8ZM0 T 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 30 1 8ZM0 V 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 31 1 8ZM0 Y 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 32 1 8ZM0 6 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 33 1 8ZM0 7 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 34 1 8ZM0 A 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 35 1 8ZM0 G 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 36 1 8ZM0 M 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 37 1 8ZM0 U 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 38 1 8ZM0 m 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 39 1 8ZM0 9 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 40 1 8ZM0 y 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 41 1 8ZM0 H 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 42 1 8ZM0 5 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 43 1 8ZM0 W 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 44 1 8ZM0 4 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 45 1 8ZM0 X 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 46 1 8ZM0 Z 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 47 1 8ZM0 E 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 48 1 8ZM0 K 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 49 1 8ZM0 Q 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 50 1 8ZM0 c 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 51 1 8ZM0 8 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 52 1 8ZM0 q 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 53 1 8ZM0 w 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 54 1 8ZM0 2 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 55 1 8ZM0 F 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 56 1 8ZM0 L 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 57 1 8ZM0 R 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 58 1 8ZM0 e 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 59 1 8ZM0 l 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 60 1 8ZM0 r 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 61 1 8ZM0 x 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 62 1 8ZM0 3 1 ? 4 ? 8ZM0 208 ? 211 ? 208 211 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 62-meric _pdbx_struct_assembly.oligomeric_count 62 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list ;A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB ; # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_entry_details.entry_id 8ZM0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8ZM0 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8ZM0 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 811406 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source SYNTHETIC _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'A self-assembled nanofiber' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8ZM0 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8ZM0 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8ZM0 _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state '3D ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 PHE N N N N 14 PHE CA C N S 15 PHE C C N N 16 PHE O O N N 17 PHE CB C N N 18 PHE CG C Y N 19 PHE CD1 C Y N 20 PHE CD2 C Y N 21 PHE CE1 C Y N 22 PHE CE2 C Y N 23 PHE CZ C Y N 24 PHE OXT O N N 25 PHE H H N N 26 PHE H2 H N N 27 PHE HA H N N 28 PHE HB2 H N N 29 PHE HB3 H N N 30 PHE HD1 H N N 31 PHE HD2 H N N 32 PHE HE1 H N N 33 PHE HE2 H N N 34 PHE HZ H N N 35 PHE HXT H N N 36 TRP N N N N 37 TRP CA C N S 38 TRP C C N N 39 TRP O O N N 40 TRP CB C N N 41 TRP CG C Y N 42 TRP CD1 C Y N 43 TRP CD2 C Y N 44 TRP NE1 N Y N 45 TRP CE2 C Y N 46 TRP CE3 C Y N 47 TRP CZ2 C Y N 48 TRP CZ3 C Y N 49 TRP CH2 C Y N 50 TRP OXT O N N 51 TRP H H N N 52 TRP H2 H N N 53 TRP HA H N N 54 TRP HB2 H N N 55 TRP HB3 H N N 56 TRP HD1 H N N 57 TRP HE1 H N N 58 TRP HE3 H N N 59 TRP HZ2 H N N 60 TRP HZ3 H N N 61 TRP HH2 H N N 62 TRP HXT H N N 63 TYR N N N N 64 TYR CA C N S 65 TYR C C N N 66 TYR O O N N 67 TYR CB C N N 68 TYR CG C Y N 69 TYR CD1 C Y N 70 TYR CD2 C Y N 71 TYR CE1 C Y N 72 TYR CE2 C Y N 73 TYR CZ C Y N 74 TYR OH O N N 75 TYR OXT O N N 76 TYR H H N N 77 TYR H2 H N N 78 TYR HA H N N 79 TYR HB2 H N N 80 TYR HB3 H N N 81 TYR HD1 H N N 82 TYR HD2 H N N 83 TYR HE1 H N N 84 TYR HE2 H N N 85 TYR HH H N N 86 TYR HXT H N N 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 PHE N CA sing N N 13 PHE N H sing N N 14 PHE N H2 sing N N 15 PHE CA C sing N N 16 PHE CA CB sing N N 17 PHE CA HA sing N N 18 PHE C O doub N N 19 PHE C OXT sing N N 20 PHE CB CG sing N N 21 PHE CB HB2 sing N N 22 PHE CB HB3 sing N N 23 PHE CG CD1 doub Y N 24 PHE CG CD2 sing Y N 25 PHE CD1 CE1 sing Y N 26 PHE CD1 HD1 sing N N 27 PHE CD2 CE2 doub Y N 28 PHE CD2 HD2 sing N N 29 PHE CE1 CZ doub Y N 30 PHE CE1 HE1 sing N N 31 PHE CE2 CZ sing Y N 32 PHE CE2 HE2 sing N N 33 PHE CZ HZ sing N N 34 PHE OXT HXT sing N N 35 TRP N CA sing N N 36 TRP N H sing N N 37 TRP N H2 sing N N 38 TRP CA C sing N N 39 TRP CA CB sing N N 40 TRP CA HA sing N N 41 TRP C O doub N N 42 TRP C OXT sing N N 43 TRP CB CG sing N N 44 TRP CB HB2 sing N N 45 TRP CB HB3 sing N N 46 TRP CG CD1 doub Y N 47 TRP CG CD2 sing Y N 48 TRP CD1 NE1 sing Y N 49 TRP CD1 HD1 sing N N 50 TRP CD2 CE2 doub Y N 51 TRP CD2 CE3 sing Y N 52 TRP NE1 CE2 sing Y N 53 TRP NE1 HE1 sing N N 54 TRP CE2 CZ2 sing Y N 55 TRP CE3 CZ3 doub Y N 56 TRP CE3 HE3 sing N N 57 TRP CZ2 CH2 doub Y N 58 TRP CZ2 HZ2 sing N N 59 TRP CZ3 CH2 sing Y N 60 TRP CZ3 HZ3 sing N N 61 TRP CH2 HH2 sing N N 62 TRP OXT HXT sing N N 63 TYR N CA sing N N 64 TYR N H sing N N 65 TYR N H2 sing N N 66 TYR CA C sing N N 67 TYR CA CB sing N N 68 TYR CA HA sing N N 69 TYR C O doub N N 70 TYR C OXT sing N N 71 TYR CB CG sing N N 72 TYR CB HB2 sing N N 73 TYR CB HB3 sing N N 74 TYR CG CD1 doub Y N 75 TYR CG CD2 sing Y N 76 TYR CD1 CE1 sing Y N 77 TYR CD1 HD1 sing N N 78 TYR CD2 CE2 doub Y N 79 TYR CD2 HD2 sing N N 80 TYR CE1 CZ doub Y N 81 TYR CE1 HE1 sing N N 82 TYR CE2 CZ sing Y N 83 TYR CE2 HE2 sing N N 84 TYR CZ OH sing N N 85 TYR OH HH sing N N 86 TYR OXT HXT sing N N 87 # _em_admin.current_status REL _em_admin.deposition_date 2024-05-21 _em_admin.deposition_site PDBJ _em_admin.entry_id 8ZM0 _em_admin.last_update 2025-12-24 _em_admin.map_release_date 2025-05-21 _em_admin.title 'A self-assembled nanofiber' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 32630 _em_entity_assembly_naturalsource.organism 'synthetic construct' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # loop_ _em_helical_entity.id _em_helical_entity.image_processing_id _em_helical_entity.details _em_helical_entity.axial_symmetry _em_helical_entity.angular_rotation_per_subunit _em_helical_entity.axial_rise_per_subunit 1 1 ? C2 5.15 4.6 2 1 ? C2 5.15 4.6 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 2022YFB3808300 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8ZM0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ #